BLASTX nr result
ID: Catharanthus22_contig00014708
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00014708
(315 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora] 90 3e-16
gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Mor... 74 2e-11
gb|EMJ03134.1| hypothetical protein PRUPE_ppa002228mg [Prunus pe... 72 1e-10
ref|XP_004300617.1| PREDICTED: DNA-directed RNA polymerase III s... 71 1e-10
emb|CBI17549.3| unnamed protein product [Vitis vinifera] 70 3e-10
ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citr... 69 8e-10
ref|XP_006425716.1| hypothetical protein CICLE_v10025048mg [Citr... 69 8e-10
gb|ABU45193.1| unknown [Petunia integrifolia subsp. inflata] 66 5e-09
ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 65 1e-08
ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III s... 65 1e-08
ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III s... 64 2e-08
gb|ESW29065.1| hypothetical protein PHAVU_002G0404000g, partial ... 64 3e-08
ref|XP_006590438.1| PREDICTED: DNA-directed RNA polymerase III s... 63 4e-08
ref|XP_006355444.1| PREDICTED: DNA-directed RNA polymerase III s... 63 4e-08
ref|XP_006355443.1| PREDICTED: DNA-directed RNA polymerase III s... 63 4e-08
ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III s... 63 4e-08
gb|EOX91150.1| Transcription regulators,zinc ion binding, putati... 62 6e-08
gb|EOX91149.1| Transcription regulators,zinc ion binding, putati... 62 6e-08
gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theo... 62 6e-08
ref|XP_004512016.1| PREDICTED: DNA-directed RNA polymerase III s... 62 6e-08
>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
Length = 643
Score = 90.1 bits (222), Expect = 3e-16
Identities = 46/104 (44%), Positives = 60/104 (57%)
Frame = +3
Query: 3 SLQHLKPESARKKTNNLXXXXXXXXXXXXSIGSAKKQNKPSSASKEQNKSDEKDWVSLKY 182
S+QH KPES++++T + GS KKQ KPS EQNK +DW+ L Y
Sbjct: 221 SMQHYKPESSKRRTTASSNLEDNTKGEEVTTGSLKKQGKPSGPVIEQNKDTREDWIPLNY 280
Query: 183 HGARSDASARYLQKMIEQNESPLQFSMSSAPIFP*I*RHDYVNT 314
HGARSD S Y++KM+E + S +QFSM+ HDYVNT
Sbjct: 281 HGARSDISMSYVRKMVEHDSSHIQFSMN----------HDYVNT 314
>gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Morus notabilis]
Length = 732
Score = 73.9 bits (180), Expect = 2e-11
Identities = 44/108 (40%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Frame = +3
Query: 3 SLQHLKPESARKKTNNLXXXXXXXXXXXXS----IGSAKKQNKPSSASKEQNKSDEKDWV 170
SL+HL ++KK N S IGS+KKQ K ++S +Q +DE+ WV
Sbjct: 224 SLKHLISAGSKKKNNVKVDAEDTVKLEESSGKKAIGSSKKQIKQENSSVKQKIADEEGWV 283
Query: 171 SLKYHGARSDASARYLQKMIEQNESPLQFSMSSAPIFP*I*RHDYVNT 314
LKYHG+ S++S RYL+KM Q SPLQF+MS +DY+N+
Sbjct: 284 PLKYHGSESESSVRYLRKMAVQESSPLQFTMSP---------YDYLNS 322
>gb|EMJ03134.1| hypothetical protein PRUPE_ppa002228mg [Prunus persica]
Length = 698
Score = 71.6 bits (174), Expect = 1e-10
Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Frame = +3
Query: 3 SLQHLKPESARKKTNNLXXXXXXXXXXXX----SIGSAKKQNKPSSASKEQNKSDEKDWV 170
SL+HLK S+R+K + S G +KKQ K +S E+ DE+ WV
Sbjct: 226 SLEHLKSGSSRRKNSVTGDAEVKVKLEESRQETSSGPSKKQTKRMESSTEKKTEDEESWV 285
Query: 171 SLKYHGARSDASARYLQKMIEQNESPLQFSMSSAPIFP*I*RHDYVNT 314
L+YH + SD SA+YL++M+ Q SP+QF+MS +DYVN+
Sbjct: 286 PLQYHSSESDFSAKYLRRMVGQESSPIQFTMSP---------YDYVNS 324
>ref|XP_004300617.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
[Fragaria vesca subsp. vesca]
Length = 685
Score = 71.2 bits (173), Expect = 1e-10
Identities = 40/104 (38%), Positives = 58/104 (55%)
Frame = +3
Query: 3 SLQHLKPESARKKTNNLXXXXXXXXXXXXSIGSAKKQNKPSSASKEQNKSDEKDWVSLKY 182
SL HLKP +++K S+ +KKQNK +S E DE+ WV L+Y
Sbjct: 223 SLDHLKPGGSKRKGTATGDAEVAVKREEKSLAPSKKQNKRVESSTE----DEESWVPLQY 278
Query: 183 HGARSDASARYLQKMIEQNESPLQFSMSSAPIFP*I*RHDYVNT 314
HG+ SD SA YL++M+ Q+ SPL+F+M+ +DYVN+
Sbjct: 279 HGSESDFSAGYLKRMVVQDSSPLEFTMTP---------YDYVNS 313
>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 70.1 bits (170), Expect = 3e-10
Identities = 36/75 (48%), Positives = 46/75 (61%)
Frame = +3
Query: 90 SIGSAKKQNKPSSASKEQNKSDEKDWVSLKYHGARSDASARYLQKMIEQNESPLQFSMSS 269
S+GS KKQNK EQN + WV LKYH + SD SARYLQKM+ ++ SP+QF MS
Sbjct: 250 SVGSLKKQNKIMGILDEQNTDAAESWVPLKYHSSESDFSARYLQKMVAEDNSPIQFLMSP 309
Query: 270 APIFP*I*RHDYVNT 314
++YVN+
Sbjct: 310 ---------YEYVNS 315
>ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
gi|568824759|ref|XP_006466762.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC5-like [Citrus sinensis]
gi|557527707|gb|ESR38957.1| hypothetical protein
CICLE_v10025048mg [Citrus clementina]
Length = 690
Score = 68.6 bits (166), Expect = 8e-10
Identities = 32/59 (54%), Positives = 45/59 (76%)
Frame = +3
Query: 90 SIGSAKKQNKPSSASKEQNKSDEKDWVSLKYHGARSDASARYLQKMIEQNESPLQFSMS 266
S+GS+KKQNK S EQ ++E+ WV LKYHG++SD SARYLQ+M+ + SP+ F+M+
Sbjct: 258 SVGSSKKQNK-RMGSIEQRSNEEECWVPLKYHGSKSDFSARYLQRMLVEENSPIHFTMN 315
>ref|XP_006425716.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
gi|557527706|gb|ESR38956.1| hypothetical protein
CICLE_v10025048mg [Citrus clementina]
Length = 637
Score = 68.6 bits (166), Expect = 8e-10
Identities = 32/59 (54%), Positives = 45/59 (76%)
Frame = +3
Query: 90 SIGSAKKQNKPSSASKEQNKSDEKDWVSLKYHGARSDASARYLQKMIEQNESPLQFSMS 266
S+GS+KKQNK S EQ ++E+ WV LKYHG++SD SARYLQ+M+ + SP+ F+M+
Sbjct: 258 SVGSSKKQNK-RMGSIEQRSNEEECWVPLKYHGSKSDFSARYLQRMLVEENSPIHFTMN 315
>gb|ABU45193.1| unknown [Petunia integrifolia subsp. inflata]
Length = 666
Score = 65.9 bits (159), Expect = 5e-09
Identities = 34/61 (55%), Positives = 42/61 (68%), Gaps = 6/61 (9%)
Frame = +3
Query: 108 KQNKPSSASKEQNKSD------EKDWVSLKYHGARSDASARYLQKMIEQNESPLQFSMSS 269
K+NKP + SK+QNK E+ WV LKYHGARS+ SARYLQ+M + SP+ FSMS
Sbjct: 240 KENKPVAPSKKQNKPPGNDKDIEEHWVHLKYHGARSEISARYLQRMAMEEGSPIPFSMSL 299
Query: 270 A 272
A
Sbjct: 300 A 300
>ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
subunit RPC5-like [Cucumis sativus]
Length = 702
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/75 (42%), Positives = 45/75 (60%)
Frame = +3
Query: 90 SIGSAKKQNKPSSASKEQNKSDEKDWVSLKYHGARSDASARYLQKMIEQNESPLQFSMSS 269
S G+++KQ K + S E DE+ W+ LKY+G SD S R+LQ M+ Q SP+QFSMS
Sbjct: 265 SAGASRKQKKQTGPSTEVKTRDEECWIPLKYYGLESDLSTRHLQSMVSQTVSPMQFSMSP 324
Query: 270 APIFP*I*RHDYVNT 314
HDY+++
Sbjct: 325 ---------HDYMDS 330
>ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
[Cucumis sativus]
Length = 702
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/75 (42%), Positives = 45/75 (60%)
Frame = +3
Query: 90 SIGSAKKQNKPSSASKEQNKSDEKDWVSLKYHGARSDASARYLQKMIEQNESPLQFSMSS 269
S G+++KQ K + S E DE+ W+ LKY+G SD S R+LQ M+ Q SP+QFSMS
Sbjct: 265 SAGASRKQKKQTGPSTEVKTRDEECWIPLKYYGLESDLSTRHLQSMVSQTVSPMQFSMSP 324
Query: 270 APIFP*I*RHDYVNT 314
HDY+++
Sbjct: 325 ---------HDYMDS 330
>ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
[Solanum lycopersicum]
Length = 669
Score = 63.9 bits (154), Expect = 2e-08
Identities = 35/59 (59%), Positives = 41/59 (69%), Gaps = 6/59 (10%)
Frame = +3
Query: 108 KQNKPSSASKEQNKSD--EKD----WVSLKYHGARSDASARYLQKMIEQNESPLQFSMS 266
K+ +P SK+QNKS EKD W+ LKYHGARSD SARYLQKM + SP+ FSMS
Sbjct: 238 KEKRPVGPSKKQNKSPGIEKDIGEHWLHLKYHGARSDISARYLQKMSMEEGSPVPFSMS 296
>gb|ESW29065.1| hypothetical protein PHAVU_002G0404000g, partial [Phaseolus
vulgaris]
Length = 363
Score = 63.5 bits (153), Expect = 3e-08
Identities = 27/59 (45%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Frame = +3
Query: 90 SIGSAKKQNKPSSASKEQNKSD-EKDWVSLKYHGARSDASARYLQKMIEQNESPLQFSM 263
S+ ++KKQNKP+ S + K+D +++W+ LKYH +SD S+RYL++M+ Q SP+ F+M
Sbjct: 265 SVATSKKQNKPTEPSIIEQKNDGDENWLPLKYHSCKSDISSRYLEQMVAQESSPINFTM 323
>ref|XP_006590438.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
[Glycine max]
Length = 697
Score = 63.2 bits (152), Expect = 4e-08
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Frame = +3
Query: 3 SLQHLKPESARKK----TNNLXXXXXXXXXXXXSIGSAKKQNKPSSASKEQNKSD-EKDW 167
+LQHL +++K T S+ ++KKQNK + S + KSD ++ W
Sbjct: 224 TLQHLNSGGSKRKNAASTGANATVKIEGSNEEKSVATSKKQNKQTGPSIIEQKSDGDECW 283
Query: 168 VSLKYHGARSDASARYLQKMIEQNESPLQFSM 263
V LKYH +SD S+RYLQ+M+ Q SP+ F+M
Sbjct: 284 VPLKYHSCKSDISSRYLQQMVTQESSPINFTM 315
>ref|XP_006355444.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
isoform X4 [Solanum tuberosum]
Length = 536
Score = 63.2 bits (152), Expect = 4e-08
Identities = 32/58 (55%), Positives = 39/58 (67%)
Frame = +3
Query: 93 IGSAKKQNKPSSASKEQNKSDEKDWVSLKYHGARSDASARYLQKMIEQNESPLQFSMS 266
+G +KKQNKP K+ + W+ LKYHGARSD SARYLQKM + SP+ FSMS
Sbjct: 243 MGPSKKQNKPPGIEKDIGEH----WLHLKYHGARSDISARYLQKMAMEEGSPVPFSMS 296
>ref|XP_006355443.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
isoform X3 [Solanum tuberosum]
Length = 577
Score = 63.2 bits (152), Expect = 4e-08
Identities = 32/58 (55%), Positives = 39/58 (67%)
Frame = +3
Query: 93 IGSAKKQNKPSSASKEQNKSDEKDWVSLKYHGARSDASARYLQKMIEQNESPLQFSMS 266
+G +KKQNKP K+ + W+ LKYHGARSD SARYLQKM + SP+ FSMS
Sbjct: 243 MGPSKKQNKPPGIEKDIGEH----WLHLKYHGARSDISARYLQKMAMEEGSPVPFSMS 296
>ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
isoform X1 [Solanum tuberosum]
Length = 669
Score = 63.2 bits (152), Expect = 4e-08
Identities = 32/58 (55%), Positives = 39/58 (67%)
Frame = +3
Query: 93 IGSAKKQNKPSSASKEQNKSDEKDWVSLKYHGARSDASARYLQKMIEQNESPLQFSMS 266
+G +KKQNKP K+ + W+ LKYHGARSD SARYLQKM + SP+ FSMS
Sbjct: 243 MGPSKKQNKPPGIEKDIGEH----WLHLKYHGARSDISARYLQKMAMEEGSPVPFSMS 296
>gb|EOX91150.1| Transcription regulators,zinc ion binding, putative isoform 3
[Theobroma cacao]
Length = 736
Score = 62.4 bits (150), Expect = 6e-08
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Frame = +3
Query: 3 SLQHLKPESARKKT----NNLXXXXXXXXXXXXSIGSAKKQNKPSSASKEQNKSDEKDWV 170
S+ HLKP +++K + + GS+ KQNK +S EQ D++ WV
Sbjct: 235 SMCHLKPSVSKRKNAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWV 294
Query: 171 SLKYHGARSDASARYLQKMIEQNESPLQFSMS 266
LKYH +++D SA+YLQ+M+ + +QF+MS
Sbjct: 295 PLKYHSSKNDFSAQYLQRMMAEESCRIQFTMS 326
>gb|EOX91149.1| Transcription regulators,zinc ion binding, putative isoform 2
[Theobroma cacao]
Length = 588
Score = 62.4 bits (150), Expect = 6e-08
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Frame = +3
Query: 3 SLQHLKPESARKKT----NNLXXXXXXXXXXXXSIGSAKKQNKPSSASKEQNKSDEKDWV 170
S+ HLKP +++K + + GS+ KQNK +S EQ D++ WV
Sbjct: 138 SMCHLKPSVSKRKNAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWV 197
Query: 171 SLKYHGARSDASARYLQKMIEQNESPLQFSMS 266
LKYH +++D SA+YLQ+M+ + +QF+MS
Sbjct: 198 PLKYHSSKNDFSAQYLQRMMAEESCRIQFTMS 229
>gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
Length = 700
Score = 62.4 bits (150), Expect = 6e-08
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Frame = +3
Query: 3 SLQHLKPESARKKT----NNLXXXXXXXXXXXXSIGSAKKQNKPSSASKEQNKSDEKDWV 170
S+ HLKP +++K + + GS+ KQNK +S EQ D++ WV
Sbjct: 235 SMCHLKPSVSKRKNAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWV 294
Query: 171 SLKYHGARSDASARYLQKMIEQNESPLQFSMS 266
LKYH +++D SA+YLQ+M+ + +QF+MS
Sbjct: 295 PLKYHSSKNDFSAQYLQRMMAEESCRIQFTMS 326
>ref|XP_004512016.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
isoform X1 [Cicer arietinum]
gi|502161082|ref|XP_004512017.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC5-like isoform X2 [Cicer
arietinum]
Length = 689
Score = 62.4 bits (150), Expect = 6e-08
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = +3
Query: 111 QNKPSSASKEQNKSD-EKDWVSLKYHGARSDASARYLQKMIEQNESPLQFSMSSAPIFP* 287
++K + SK QNKSD ++ WV LKYHG +SD S+RY Q+M+ Q SP+ F MSS
Sbjct: 276 EDKSVATSKMQNKSDGDECWVPLKYHGCKSDISSRYFQQMVAQESSPINFEMSS------ 329
Query: 288 I*RHDYVNT 314
+DY+ T
Sbjct: 330 ---YDYIAT 335