BLASTX nr result
ID: Catharanthus22_contig00014561
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus22_contig00014561 (1520 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABH07899.1| putative polyprotein [Solanum lycopersicum] 130 1e-49 ref|XP_003605102.1| Peptide transporter PTR2 [Medicago truncatul... 124 1e-48 ref|XP_003599760.1| Peptide transporter PTR2 [Medicago truncatul... 124 1e-48 ref|XP_003599761.1| Peptide transporter PTR2 [Medicago truncatul... 124 1e-48 ref|XP_004233950.1| PREDICTED: uncharacterized protein LOC101265... 136 8e-48 ref|XP_004235138.1| PREDICTED: uncharacterized protein LOC101243... 142 1e-46 ref|XP_004231364.1| PREDICTED: uncharacterized protein LOC101245... 133 2e-46 gb|ABD32334.2| Polynucleotidyl transferase, Ribonuclease H fold ... 142 5e-46 gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop... 130 9e-46 ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211... 127 2e-45 ref|XP_004228785.1| PREDICTED: uncharacterized protein LOC101255... 137 5e-45 emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera] 134 2e-44 ref|XP_004239452.1| PREDICTED: uncharacterized protein LOC101259... 134 1e-43 ref|XP_004252487.1| PREDICTED: uncharacterized protein LOC101249... 114 2e-42 dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 136 4e-42 emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 136 4e-42 gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 137 1e-41 gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana] 112 2e-41 emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera] 133 2e-41 dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t... 127 2e-40 >gb|ABH07899.1| putative polyprotein [Solanum lycopersicum] Length = 1428 Score = 130 bits (326), Expect(3) = 1e-49 Identities = 63/130 (48%), Positives = 86/130 (66%), Gaps = 3/130 (2%) Frame = -1 Query: 1211 WGFLLHNKSSAKTKLRNFCIFIETQFQTKIQMVRSDNGMEF---SMPDFFDAKGIIHQMS 1041 W LL KS ++NF I TQF + +++VRSDNG EF D F+ GI+HQ S Sbjct: 592 WVHLLQLKSETIVAIKNFFSMINTQFNSHVKVVRSDNGTEFLNSQCKDLFNHLGILHQSS 651 Query: 1040 CVYTLQQDGVVERKHQHLLNIGSALKIQSSLPLSYWGYCIKHAATLINLTPTPLLSNKAP 861 C +T QQ+GVVERKH+H+LNI A++ Q+ LP+ +WGYCI+ A L+N P+ SNK+ Sbjct: 652 CPHTPQQNGVVERKHRHILNIARAIRFQAHLPIRFWGYCIRAAVYLMNRLPSSANSNKSA 711 Query: 860 FEILYSKLPS 831 +E+LY K PS Sbjct: 712 YELLYCKQPS 721 Score = 73.6 bits (179), Expect(3) = 1e-49 Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 1/82 (1%) Frame = -3 Query: 1452 LWHYRLGHLSEGRLQFLNQIHNEIKSDH-SEHCIICPLSKQHKLPFPIHVAATQHIFQSI 1276 +WH RLGH S+ L+ L +I + K D HC +CPL+KQ +L FP+ T +F + Sbjct: 503 IWHRRLGHPSQQILKLL-KIDSSSKGDGIPAHCPVCPLAKQTRLTFPVSTTRTSMMFDVV 561 Query: 1275 HVDIWGPSNTITVHGHRYFLTM 1210 H+D+WGP T T++ YFLT+ Sbjct: 562 HMDLWGPYKTPTLNRKHYFLTI 583 Score = 42.7 bits (99), Expect(3) = 1e-49 Identities = 30/75 (40%), Positives = 38/75 (50%) Frame = -3 Query: 852 LVLKITFLFFLRVFGCLAYACTIDHGRSKFDPRGSNVYILVILILQKAIFF*TFIHSNFS 673 L K LF L+V GCL YA T+ G KF R S +L LQK IHS Sbjct: 715 LYCKQPSLFHLKVIGCLCYATTVPKG-DKFSARASAAILLGYSELQKGYVL-LDIHSTKV 772 Query: 672 CISRNVLSVEDNFPF 628 ++R+V+ E+ FPF Sbjct: 773 HVNRDVVFHEEIFPF 787 Score = 57.0 bits (136), Expect(3) = 3e-15 Identities = 23/47 (48%), Positives = 31/47 (65%) Frame = -3 Query: 246 PKTYHEAAKFPEW*QVMKQELCALEEKNTWTLQSLPAGKHPIGCKWV 106 PK + +A++ W Q MKQE+ ALEE NTW + LP G H +G KW+ Sbjct: 924 PKNFKQASQDERWIQAMKQEIKALEENNTWQVVELPEGMHAVGSKWI 970 Score = 49.7 bits (117), Expect(3) = 3e-15 Identities = 23/35 (65%), Positives = 30/35 (85%) Frame = -1 Query: 107 SDGNLERFKARLVAKVFTQQYVIDYIDSFSPVAKM 3 ++G +ERFKARLVAK ++QQ +DY D+FSPVAKM Sbjct: 977 ANGEIERFKARLVAKGYSQQEGLDYHDTFSPVAKM 1011 Score = 23.1 bits (48), Expect(3) = 3e-15 Identities = 9/35 (25%), Positives = 18/35 (51%) Frame = -2 Query: 376 YLKDFDCDPPVPQSPHTVAQVLSYDHFSPAHKSFV 272 ++KD+ + H +A L+Y+ P +SF+ Sbjct: 881 WMKDYTITKGHSSTKHPMASYLNYEKLKPECRSFL 915 >ref|XP_003605102.1| Peptide transporter PTR2 [Medicago truncatula] gi|355506157|gb|AES87299.1| Peptide transporter PTR2 [Medicago truncatula] Length = 1313 Score = 124 bits (312), Expect(3) = 1e-48 Identities = 59/126 (46%), Positives = 80/126 (63%) Frame = -1 Query: 1211 WGFLLHNKSSAKTKLRNFCIFIETQFQTKIQMVRSDNGMEFSMPDFFDAKGIIHQMSCVY 1032 W LL NKS + ++NF IE + +R DNG EF + F+ +KGII+Q SCV Sbjct: 877 WLILLKNKSEVSSHVKNFIQLIENHHHITPKFIRLDNGPEFLLSAFYASKGIIYQRSCVE 936 Query: 1031 TLQQDGVVERKHQHLLNIGSALKIQSSLPLSYWGYCIKHAATLINLTPTPLLSNKAPFEI 852 T +Q+G VERKHQH+LN AL QS LP +W Y + H+ LIN TPLL +K+P+++ Sbjct: 937 TPEQNGRVERKHQHILNFARALLFQSKLPNIFWSYAVLHSVFLINRVSTPLLKHKSPYQV 996 Query: 851 LYSKLP 834 LY+ LP Sbjct: 997 LYNSLP 1002 Score = 91.7 bits (226), Expect(3) = 1e-48 Identities = 43/103 (41%), Positives = 63/103 (61%) Frame = -3 Query: 1518 SFSNYVSNTIHTQFNPKEVSNLLWHYRLGHLSEGRLQFLNQIHNEIKSDHSEHCIICPLS 1339 S S+ S++ F P SN +WH+RLGHLS RL ++Q++ I D+ C +C S Sbjct: 769 SVSSLTSHSSTISFIP---SNAIWHFRLGHLSNQRLSKMHQLYFSISVDNKATCDVCHFS 825 Query: 1338 KQHKLPFPIHVAATQHIFQSIHVDIWGPSNTITVHGHRYFLTM 1210 KQ KLP+ + + F+S+H DIWGP ++HGH+YFLT+ Sbjct: 826 KQRKLPYNSSHSIAKSKFESVHFDIWGPLAQTSIHGHKYFLTI 868 Score = 26.6 bits (57), Expect(3) = 1e-48 Identities = 9/25 (36%), Positives = 16/25 (64%) Frame = -2 Query: 745 CVYLGHSDTTKGHILLDFHTQQFFM 671 CV+LG+ KG +L D +++ F+ Sbjct: 1019 CVFLGYKSGFKGSVLFDLDSREIFV 1043 >ref|XP_003599760.1| Peptide transporter PTR2 [Medicago truncatula] gi|355488808|gb|AES70011.1| Peptide transporter PTR2 [Medicago truncatula] Length = 1282 Score = 124 bits (312), Expect(3) = 1e-48 Identities = 59/126 (46%), Positives = 80/126 (63%) Frame = -1 Query: 1211 WGFLLHNKSSAKTKLRNFCIFIETQFQTKIQMVRSDNGMEFSMPDFFDAKGIIHQMSCVY 1032 W LL NKS + ++NF IE + +R DNG EF + F+ +KGII+Q SCV Sbjct: 867 WLILLKNKSEVSSHVKNFIQLIENHHHITPKFIRLDNGPEFLLSAFYASKGIIYQRSCVE 926 Query: 1031 TLQQDGVVERKHQHLLNIGSALKIQSSLPLSYWGYCIKHAATLINLTPTPLLSNKAPFEI 852 T +Q+G VERKHQH+LN AL QS LP +W Y + H+ LIN TPLL +K+P+++ Sbjct: 927 TPEQNGRVERKHQHILNFARALLFQSKLPNIFWSYAVLHSVFLINRVSTPLLKHKSPYQV 986 Query: 851 LYSKLP 834 LY+ LP Sbjct: 987 LYNSLP 992 Score = 91.7 bits (226), Expect(3) = 1e-48 Identities = 43/103 (41%), Positives = 63/103 (61%) Frame = -3 Query: 1518 SFSNYVSNTIHTQFNPKEVSNLLWHYRLGHLSEGRLQFLNQIHNEIKSDHSEHCIICPLS 1339 S S+ S++ F P SN +WH+RLGHLS RL ++Q++ I D+ C +C S Sbjct: 759 SVSSLTSHSSTISFIP---SNAIWHFRLGHLSNQRLSKMHQLYFSISVDNKATCDVCHFS 815 Query: 1338 KQHKLPFPIHVAATQHIFQSIHVDIWGPSNTITVHGHRYFLTM 1210 KQ KLP+ + + F+S+H DIWGP ++HGH+YFLT+ Sbjct: 816 KQRKLPYNSSHSIAKSKFESVHFDIWGPLAQTSIHGHKYFLTI 858 Score = 26.6 bits (57), Expect(3) = 1e-48 Identities = 9/25 (36%), Positives = 16/25 (64%) Frame = -2 Query: 745 CVYLGHSDTTKGHILLDFHTQQFFM 671 CV+LG+ KG +L D +++ F+ Sbjct: 1009 CVFLGYKSGFKGSVLFDLDSREIFV 1033 >ref|XP_003599761.1| Peptide transporter PTR2 [Medicago truncatula] gi|355488809|gb|AES70012.1| Peptide transporter PTR2 [Medicago truncatula] Length = 1194 Score = 124 bits (312), Expect(3) = 1e-48 Identities = 59/126 (46%), Positives = 80/126 (63%) Frame = -1 Query: 1211 WGFLLHNKSSAKTKLRNFCIFIETQFQTKIQMVRSDNGMEFSMPDFFDAKGIIHQMSCVY 1032 W LL NKS + ++NF IE + +R DNG EF + F+ +KGII+Q SCV Sbjct: 779 WLILLKNKSEVSSHVKNFIQLIENHHHITPKFIRLDNGPEFLLSAFYASKGIIYQRSCVE 838 Query: 1031 TLQQDGVVERKHQHLLNIGSALKIQSSLPLSYWGYCIKHAATLINLTPTPLLSNKAPFEI 852 T +Q+G VERKHQH+LN AL QS LP +W Y + H+ LIN TPLL +K+P+++ Sbjct: 839 TPEQNGRVERKHQHILNFARALLFQSKLPNIFWSYAVLHSVFLINRVSTPLLKHKSPYQV 898 Query: 851 LYSKLP 834 LY+ LP Sbjct: 899 LYNSLP 904 Score = 91.7 bits (226), Expect(3) = 1e-48 Identities = 43/103 (41%), Positives = 63/103 (61%) Frame = -3 Query: 1518 SFSNYVSNTIHTQFNPKEVSNLLWHYRLGHLSEGRLQFLNQIHNEIKSDHSEHCIICPLS 1339 S S+ S++ F P SN +WH+RLGHLS RL ++Q++ I D+ C +C S Sbjct: 671 SVSSLTSHSSTISFIP---SNAIWHFRLGHLSNQRLSKMHQLYFSISVDNKATCDVCHFS 727 Query: 1338 KQHKLPFPIHVAATQHIFQSIHVDIWGPSNTITVHGHRYFLTM 1210 KQ KLP+ + + F+S+H DIWGP ++HGH+YFLT+ Sbjct: 728 KQRKLPYNSSHSIAKSKFESVHFDIWGPLAQTSIHGHKYFLTI 770 Score = 26.6 bits (57), Expect(3) = 1e-48 Identities = 9/25 (36%), Positives = 16/25 (64%) Frame = -2 Query: 745 CVYLGHSDTTKGHILLDFHTQQFFM 671 CV+LG+ KG +L D +++ F+ Sbjct: 921 CVFLGYKSGFKGSVLFDLDSREIFV 945 >ref|XP_004233950.1| PREDICTED: uncharacterized protein LOC101265997 [Solanum lycopersicum] Length = 953 Score = 136 bits (342), Expect(3) = 8e-48 Identities = 60/138 (43%), Positives = 95/138 (68%), Gaps = 3/138 (2%) Frame = -1 Query: 1235 MDIDTSLPWGFLLHNKSSAKTKLRNFCIFIETQFQTKIQMVRSDNGMEFSMPD---FFDA 1065 +D T + W FL+ KS L+NF + ++TQFQ+K+Q++R+DNG EF + F + Sbjct: 596 VDDYTRMLWLFLVKLKSDVCVVLQNFFVLVQTQFQSKVQIIRTDNGSEFVNAECNKLFVS 655 Query: 1064 KGIIHQMSCVYTLQQDGVVERKHQHLLNIGSALKIQSSLPLSYWGYCIKHAATLINLTPT 885 +GI+HQ +C++T QQ+G+ ERKH+H+L I A++ Q +P+ +WG+CI AA +IN PT Sbjct: 656 RGIVHQRTCIHTPQQNGIAERKHKHILEIARAIRFQGHIPIKFWGHCILSAAYIINRLPT 715 Query: 884 PLLSNKAPFEILYSKLPS 831 P+L K+P+E+ + K PS Sbjct: 716 PVLQGKSPYEMFHKKQPS 733 Score = 76.3 bits (186), Expect(3) = 8e-48 Identities = 36/82 (43%), Positives = 48/82 (58%) Frame = -3 Query: 1455 LLWHYRLGHLSEGRLQFLNQIHNEIKSDHSEHCIICPLSKQHKLPFPIHVAATQHIFQSI 1276 LLWH RLGH S L + S C ICPL+KQH+LPF + + FQ + Sbjct: 514 LLWHQRLGHTSSSVLTQVFHFPVTQCSKEVHTCTICPLAKQHRLPFFHSTSMSTKAFQLL 573 Query: 1275 HVDIWGPSNTITVHGHRYFLTM 1210 H+D+WGP NT T G+R+F+T+ Sbjct: 574 HIDVWGPFNTTTHDGNRFFVTI 595 Score = 27.7 bits (60), Expect(3) = 8e-48 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = -2 Query: 742 VYLGHSDTTKGHILLDFHTQQFFM 671 V++G+S+ KG+IL D + FF+ Sbjct: 763 VHMGYSENIKGYILYDLKNKYFFL 786 >ref|XP_004235138.1| PREDICTED: uncharacterized protein LOC101243773 [Solanum lycopersicum] Length = 957 Score = 142 bits (358), Expect(2) = 1e-46 Identities = 71/132 (53%), Positives = 90/132 (68%), Gaps = 3/132 (2%) Frame = -1 Query: 1211 WGFLLHNKSSAKTKLRNFCIFIETQFQTKIQMVRSDNGMEFSMPD---FFDAKGIIHQMS 1041 W LL KS+A ++ F IE QFQTK++ +RSDNG+EF+ + FF KGIIHQ + Sbjct: 689 WTQLLRCKSNALQTIKAFVSLIENQFQTKLKAIRSDNGLEFTSSEAVHFFQTKGIIHQKT 748 Query: 1040 CVYTLQQDGVVERKHQHLLNIGSALKIQSSLPLSYWGYCIKHAATLINLTPTPLLSNKAP 861 C YT QQ+GVVERKH++LL +L QS LPL YWG C+ A +IN PT LL NK+P Sbjct: 749 CPYTPQQNGVVERKHKYLLETARSLLFQSKLPLRYWGECVLTATYIINRLPTKLLQNKSP 808 Query: 860 FEILYSKLPSYS 825 +EILY K P+YS Sbjct: 809 YEILYLKQPTYS 820 Score = 73.2 bits (178), Expect(2) = 1e-46 Identities = 38/103 (36%), Positives = 58/103 (56%) Frame = -3 Query: 1518 SFSNYVSNTIHTQFNPKEVSNLLWHYRLGHLSEGRLQFLNQIHNEIKSDHSEHCIICPLS 1339 SF++ S+T +N E LLWH RLGH+ +++ + I C ICP++ Sbjct: 585 SFADVSSHT----YNDDE---LLWHARLGHVPFVKMRNITSIPVNFSPKQPFTCNICPMA 637 Query: 1338 KQHKLPFPIHVAATQHIFQSIHVDIWGPSNTITVHGHRYFLTM 1210 +Q ++PFP + T F+ +HVD+WGP + T G+ YFLTM Sbjct: 638 RQTRMPFPESTSITTKTFELLHVDLWGPYHIPTHDGYHYFLTM 680 >ref|XP_004231364.1| PREDICTED: uncharacterized protein LOC101245809 [Solanum lycopersicum] Length = 1094 Score = 133 bits (334), Expect(3) = 2e-46 Identities = 64/132 (48%), Positives = 86/132 (65%), Gaps = 3/132 (2%) Frame = -1 Query: 1211 WGFLLHNKSSAKTKLRNFCIFIETQFQTKIQMVRSDNGMEF---SMPDFFDAKGIIHQMS 1041 W LL KS+A L++F IE QF+ ++ +R+DNG+EF +FF KGI+HQ + Sbjct: 620 WTQLLSTKSNALQNLKSFITMIENQFEVTVKKIRTDNGLEFVNTESTNFFKTKGIVHQKT 679 Query: 1040 CVYTLQQDGVVERKHQHLLNIGSALKIQSSLPLSYWGYCIKHAATLINLTPTPLLSNKAP 861 C YT QQ+GVVERKH+HLL AL QS LP+ YWG CI A +IN P+ +L+ K P Sbjct: 680 CPYTPQQNGVVERKHKHLLETARALLFQSKLPVKYWGECILCATYIINRLPSTVLNQKCP 739 Query: 860 FEILYSKLPSYS 825 +E+LY + P YS Sbjct: 740 YEVLYFRKPLYS 751 Score = 76.3 bits (186), Expect(3) = 2e-46 Identities = 33/93 (35%), Positives = 57/93 (61%) Frame = -3 Query: 1488 HTQFNPKEVSNLLWHYRLGHLSEGRLQFLNQIHNEIKSDHSEHCIICPLSKQHKLPFPIH 1309 +TQ K +++WH RLGH+ +++ ++ I + + C ICP+++Q +LPF Sbjct: 519 NTQPCAKNHVDIVWHNRLGHVPFVKMRNISSIPVKFSAKQPFMCSICPMARQERLPFKPR 578 Query: 1308 VAATQHIFQSIHVDIWGPSNTITVHGHRYFLTM 1210 T HIF+ +HVD+WGP +T T + +YF+T+ Sbjct: 579 TTLTSHIFELLHVDLWGPYSTPTYNHFKYFMTI 611 Score = 26.2 bits (56), Expect(3) = 2e-46 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = -3 Query: 822 LRVFGCLAYACTIDHGRSKFDPR 754 +R FGCL Y R+KF+PR Sbjct: 753 MRSFGCLCYPTVPIPHRAKFEPR 775 Score = 49.3 bits (116), Expect(2) = 2e-10 Identities = 23/47 (48%), Positives = 26/47 (55%) Frame = -3 Query: 246 PKTYHEAAKFPEW*QVMKQELCALEEKNTWTLQSLPAGKHPIGCKWV 106 P +Y EA P W M QE AL +TW L LP GK IGC+WV Sbjct: 954 PTSYEEAVIDPAWQAAMTQEFDALHLNHTWDLVPLPFGKKAIGCRWV 1000 Score = 44.3 bits (103), Expect(2) = 2e-10 Identities = 21/35 (60%), Positives = 26/35 (74%) Frame = -1 Query: 107 SDGNLERFKARLVAKVFTQQYVIDYIDSFSPVAKM 3 +DG +ER KARLV K +TQQ IDY ++FS V KM Sbjct: 1007 ADGTIERLKARLVVKGYTQQAGIDYTETFSHVVKM 1041 >gb|ABD32334.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago truncatula] Length = 772 Score = 142 bits (358), Expect(3) = 5e-46 Identities = 65/126 (51%), Positives = 84/126 (66%) Frame = -1 Query: 1211 WGFLLHNKSSAKTKLRNFCIFIETQFQTKIQMVRSDNGMEFSMPDFFDAKGIIHQMSCVY 1032 W LL NKS ++NF + I T +Q + +RSDNG EF +P+F+ +KGIIHQ SCV Sbjct: 611 WVILLKNKSEVSNHVKNFVVLIHTHYQITPKYIRSDNGPEFLIPEFYASKGIIHQKSCVE 670 Query: 1031 TLQQDGVVERKHQHLLNIGSALKIQSSLPLSYWGYCIKHAATLINLTPTPLLSNKAPFEI 852 T QQ+G VERKHQH+LN+ AL QS LP +W Y + HA LIN PTPL K+P+++ Sbjct: 671 TPQQNGRVERKHQHILNVARALLFQSKLPNFFWSYAVIHAVFLINKVPTPLFKQKSPYQL 730 Query: 851 LYSKLP 834 LY LP Sbjct: 731 LYDSLP 736 Score = 65.9 bits (159), Expect(3) = 5e-46 Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 1/97 (1%) Frame = -3 Query: 1497 NTIHTQFNPKEV-SNLLWHYRLGHLSEGRLQFLNQIHNEIKSDHSEHCIICPLSKQHKLP 1321 N++ + N + SN +WH+RLGHLS RL ++ +++ I D+ + I SK Sbjct: 524 NSVSSNNNVSSIPSNAIWHFRLGHLSNQRLSMMHSLYSSITIDNKAYSIAS--SK----- 576 Query: 1320 FPIHVAATQHIFQSIHVDIWGPSNTITVHGHRYFLTM 1210 F+ +H DIWGP + +VHGH+YFLT+ Sbjct: 577 -----------FELLHFDIWGPLSVTSVHGHKYFLTI 602 Score = 25.8 bits (55), Expect(3) = 5e-46 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = -3 Query: 819 RVFGCLAYACTIDHGRSKFDPRGSNVYILVILILQKAIFF 700 +VFGCL +A T+ RSK R +K+IFF Sbjct: 742 KVFGCLCFASTLLAQRSKLQSRA-----------RKSIFF 770 >gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein (gb|U12626) [Arabidopsis thaliana] Length = 1315 Score = 130 bits (328), Expect(3) = 9e-46 Identities = 62/128 (48%), Positives = 82/128 (64%) Frame = -1 Query: 1211 WGFLLHNKSSAKTKLRNFCIFIETQFQTKIQMVRSDNGMEFSMPDFFDAKGIIHQMSCVY 1032 W +LL NKS T + F +E QF+T I+ VRSDN E + F+ +KGI+ SC Sbjct: 497 WVYLLRNKSDVLTVIPTFVTMVENQFETTIKGVRSDNAPELNFTQFYHSKGIVPYHSCPE 556 Query: 1031 TLQQDGVVERKHQHLLNIGSALKIQSSLPLSYWGYCIKHAATLINLTPTPLLSNKAPFEI 852 T QQ+ VVERKHQH+LN+ +L QS +P+SYWG CI A LIN P P+L +K PFE+ Sbjct: 557 TPQQNSVVERKHQHILNVARSLFFQSHIPISYWGDCILTAVYLINRLPAPILEDKCPFEV 616 Query: 851 LYSKLPSY 828 L +P+Y Sbjct: 617 LTKTVPTY 624 Score = 70.5 bits (171), Expect(3) = 9e-46 Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 2/86 (2%) Frame = -3 Query: 1461 SNLLWHYRLGHLSEGRLQFLNQIHN--EIKSDHSEHCIICPLSKQHKLPFPIHVAATQHI 1288 S+ LWH RLGH S +LQ ++ + + + K++ HC +C +SKQ LPF H + Sbjct: 403 SHDLWHKRLGHPSVQKLQPMSSLLSFPKQKNNTDFHCRVCHISKQKHLPFVSHNNKSSRP 462 Query: 1287 FQSIHVDIWGPSNTITVHGHRYFLTM 1210 F IH+D WGP + T G+RYFLT+ Sbjct: 463 FDLIHIDTWGPFSVQTHDGYRYFLTI 488 Score = 32.0 bits (71), Expect(3) = 9e-46 Identities = 21/65 (32%), Positives = 32/65 (49%) Frame = -3 Query: 822 LRVFGCLAYACTIDHGRSKFDPRGSNVYILVILILQKAIFF*TFIHSNFSCISRNVLSVE 643 ++VFGCL YA T R KF PR + K + + ++ +SR+V+ E Sbjct: 627 IKVFGCLCYASTSPKDRHKFSPRAKACAFIGYPSGFKG-YKLLDLETHSIIVSRHVVFHE 685 Query: 642 DNFPF 628 + FPF Sbjct: 686 ELFPF 690 Score = 48.1 bits (113), Expect(3) = 5e-14 Identities = 22/35 (62%), Positives = 31/35 (88%) Frame = -1 Query: 107 SDGNLERFKARLVAKVFTQQYVIDYIDSFSPVAKM 3 SDG++ER+KARLVA+ +TQ+ IDY ++FSPVAK+ Sbjct: 854 SDGSVERYKARLVAQGYTQKEGIDYNETFSPVAKL 888 Score = 45.4 bits (106), Expect(3) = 5e-14 Identities = 21/47 (44%), Positives = 25/47 (53%) Frame = -3 Query: 246 PKTYHEAAKFPEW*QVMKQELCALEEKNTWTLQSLPAGKHPIGCKWV 106 P Y EA K W M E LE +TW + SLPA K IGC+W+ Sbjct: 801 PSNYTEAEKLQVWRDAMGAEFDFLEGTHTWEVCSLPADKRCIGCRWI 847 Score = 32.0 bits (71), Expect(3) = 5e-14 Identities = 12/35 (34%), Positives = 21/35 (60%) Frame = -2 Query: 376 YLKDFDCDPPVPQSPHTVAQVLSYDHFSPAHKSFV 272 YL+D+ C V +PH + + LSYD + + +F+ Sbjct: 758 YLQDYYCHSVVSSTPHEIRKFLSYDRINDPYLTFL 792 >ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211618 [Cucumis sativus] Length = 2085 Score = 127 bits (318), Expect(3) = 2e-45 Identities = 65/137 (47%), Positives = 80/137 (58%) Frame = -1 Query: 1235 MDIDTSLPWGFLLHNKSSAKTKLRNFCIFIETQFQTKIQMVRSDNGMEFSMPDFFDAKGI 1056 +D + W +LL +KS + F IETQF I++ RSDN E + D F G Sbjct: 453 VDDKSRYTWVYLLKHKSDILQVIPRFFKLIETQFSKVIKVFRSDNAPELNFRDLFAKTGT 512 Query: 1055 IHQMSCVYTLQQDGVVERKHQHLLNIGSALKIQSSLPLSYWGYCIKHAATLINLTPTPLL 876 HQ SC YT QQ+ VVERKHQHLLN+ AL QS +PL +WG C+ AA LIN TP LL Sbjct: 513 THQFSCAYTPQQNSVVERKHQHLLNVARALMFQSKVPLIFWGECVLSAAYLINRTPMVLL 572 Query: 875 SNKAPFEILYSKLPSYS 825 SN PF L+ K Y+ Sbjct: 573 SNNTPFAALFKKKADYN 589 Score = 66.6 bits (161), Expect(3) = 2e-45 Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 4/103 (3%) Frame = -3 Query: 1506 YVSNTIHTQFNPKEVSNLLWHYRLGHLSEGRLQFLNQIHNEIKSDHSEHCI----ICPLS 1339 +V++T HT K +++ WH R+GH S R++ L ++ I+ +C ICPL+ Sbjct: 354 HVNSTAHTALMCKVWASM-WHKRMGHPSISRIKELAKM---IEISDFPNCKEVYHICPLA 409 Query: 1338 KQHKLPFPIHVAATQHIFQSIHVDIWGPSNTITVHGHRYFLTM 1210 KQ +L FPI +++F+ IH DIWGP T T GH Y T+ Sbjct: 410 KQRRLSFPILNNIAENVFELIHCDIWGPFKTPTHAGHSYSATI 452 Score = 38.9 bits (89), Expect(3) = 2e-45 Identities = 26/65 (40%), Positives = 31/65 (47%) Frame = -3 Query: 822 LRVFGCLAYACTIDHGRSKFDPRGSNVYILVILILQKAIFF*TFIHSNFSCISRNVLSVE 643 ++ FGCLAYA T RSKFDPR + K F ISR+VL E Sbjct: 591 IKTFGCLAYASTPSVNRSKFDPRAQPCVFMGFPPGIKGYRLYDIAKRKF-FISRDVLFFE 649 Query: 642 DNFPF 628 + FPF Sbjct: 650 ELFPF 654 Score = 77.8 bits (190), Expect(2) = 5e-27 Identities = 40/85 (47%), Positives = 49/85 (57%) Frame = -1 Query: 1235 MDIDTSLPWGFLLHNKSSAKTKLRNFCIFIETQFQTKIQMVRSDNGMEFSMPDFFDAKGI 1056 +D + W +LL +KS + F IETQF I++ RSDN E + D F G Sbjct: 1878 VDDKSRYTWVYLLKHKSDILQVIPRFFKLIETQFSKVIKVFRSDNAPELNFRDLFAKTGT 1937 Query: 1055 IHQMSCVYTLQQDGVVERKHQHLLN 981 HQ SC YT QQ+ VVERKHQHLLN Sbjct: 1938 THQFSCAYTPQQNSVVERKHQHLLN 1962 Score = 72.0 bits (175), Expect(2) = 5e-27 Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 1/87 (1%) Frame = -3 Query: 1467 EVSNLLWHYRLGHLSEGRLQFL-NQIHNEIKSDHSEHCIICPLSKQHKLPFPIHVAATQH 1291 +VS +WH R+GH S R++ L I + E C ICPL+KQ +L FPI ++ Sbjct: 1791 KVSASMWHKRMGHPSISRIKELAKMIEISDFPNCKEVCHICPLAKQRRLSFPILNNIAEN 1850 Query: 1290 IFQSIHVDIWGPSNTITVHGHRYFLTM 1210 IF IH DIWGP T T GH YF T+ Sbjct: 1851 IFDLIHCDIWGPFKTPTHAGHSYFATI 1877 Score = 54.3 bits (129), Expect(3) = 1e-16 Identities = 24/53 (45%), Positives = 32/53 (60%) Frame = -3 Query: 264 VGSIA*PKTYHEAAKFPEW*QVMKQELCALEEKNTWTLQSLPAGKHPIGCKWV 106 V SI P YH+A K W + M +E+ A+E NTWT+ S+P H +G KWV Sbjct: 779 VTSIYEPTYYHQAVKHHTWRKAMAEEIEAMERTNTWTIVSIPKDHHTVGSKWV 831 Score = 48.1 bits (113), Expect(3) = 1e-16 Identities = 21/34 (61%), Positives = 29/34 (85%) Frame = -1 Query: 104 DGNLERFKARLVAKVFTQQYVIDYIDSFSPVAKM 3 DG ++R+KARLVAK + QQ ID++D+FSPVAK+ Sbjct: 839 DGTIDRYKARLVAKGYNQQEGIDFLDTFSPVAKI 872 Score = 32.0 bits (71), Expect(3) = 1e-16 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%) Frame = -2 Query: 376 YLKDFDCDPPVPQS-PHTVAQVLSYDHFSPAHKSFVFD 266 YLKDF C+ S P + Q LSY+ +S HK+++F+ Sbjct: 741 YLKDFYCNLTSQNSTPFPLNQYLSYNAYSQHHKNYMFN 778 >ref|XP_004228785.1| PREDICTED: uncharacterized protein LOC101255821 [Solanum lycopersicum] Length = 1125 Score = 137 bits (346), Expect(2) = 5e-45 Identities = 69/129 (53%), Positives = 88/129 (68%), Gaps = 3/129 (2%) Frame = -1 Query: 1202 LLHNKSSAKTKLRNFCIFIETQFQTKIQMVRSDNGMEFSMPD---FFDAKGIIHQMSCVY 1032 LL KS+A ++ F IE +FQTK++ +RSDNG+EF+ + FF KGIIHQ +C Y Sbjct: 699 LLRCKSNALQTIKAFVSLIENEFQTKLKAIRSDNGLEFTSSEAVHFFQTKGIIHQKTCPY 758 Query: 1031 TLQQDGVVERKHQHLLNIGSALKIQSSLPLSYWGYCIKHAATLINLTPTPLLSNKAPFEI 852 T QQ+GVVERKH++LL AL QS LPL YWG C+ A +IN PT LL NK+P+E Sbjct: 759 TPQQNGVVERKHKYLLETARALLFQSKLPLRYWGECVLTAIYIINRLPTKLLQNKSPYET 818 Query: 851 LYSKLPSYS 825 LY K P+YS Sbjct: 819 LYLKQPTYS 827 Score = 72.4 bits (176), Expect(2) = 5e-45 Identities = 32/82 (39%), Positives = 49/82 (59%) Frame = -3 Query: 1455 LLWHYRLGHLSEGRLQFLNQIHNEIKSDHSEHCIICPLSKQHKLPFPIHVAATQHIFQSI 1276 LLWH RLGH+ +++ + I + C ICP+++Q ++PF + T IF+ + Sbjct: 606 LLWHTRLGHVPFVKMRNITSIPVNVSPKQPFTCNICPMARQTRMPFQESTSITTKIFELL 665 Query: 1275 HVDIWGPSNTITVHGHRYFLTM 1210 HVD+WGP + T G+ YFLTM Sbjct: 666 HVDLWGPYHIPTHDGYHYFLTM 687 Score = 49.3 bits (116), Expect(2) = 1e-11 Identities = 22/35 (62%), Positives = 29/35 (82%) Frame = -1 Query: 107 SDGNLERFKARLVAKVFTQQYVIDYIDSFSPVAKM 3 +DG++ERFKARLV K +TQQ +DY ++FSPV KM Sbjct: 1077 ADGSIERFKARLVVKGYTQQAGVDYNETFSPVVKM 1111 Score = 48.5 bits (114), Expect(2) = 1e-11 Identities = 22/47 (46%), Positives = 25/47 (53%) Frame = -3 Query: 246 PKTYHEAAKFPEW*QVMKQELCALEEKNTWTLQSLPAGKHPIGCKWV 106 P T+ EA P W Q M E AL +TW + LP K IGCKWV Sbjct: 1024 PNTFEEAILHPAWQQAMTHEFEALHANDTWEMVMLPDEKKAIGCKWV 1070 >emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera] Length = 1125 Score = 134 bits (337), Expect(2) = 2e-44 Identities = 67/128 (52%), Positives = 83/128 (64%), Gaps = 1/128 (0%) Frame = -1 Query: 1205 FLLHNKSSAKTKLRNFCIFIETQFQTKIQMVRSDNGMEF-SMPDFFDAKGIIHQMSCVYT 1029 F +H+KS + L NF F++TQF I +R DNG EF S +FF KG +Q SCVYT Sbjct: 343 FFMHHKSETQHLLVNFFSFVQTQFHVSIANIRVDNGGEFFSXREFFKQKGTTYQHSCVYT 402 Query: 1028 LQQDGVVERKHQHLLNIGSALKIQSSLPLSYWGYCIKHAATLINLTPTPLLSNKAPFEIL 849 QQ+GVVERKH+H+L A Q+ LPL +W C+ A +IN PTPLLS + PFE L Sbjct: 403 PQQNGVVERKHRHILESARAFXFQAHLPLPFWAECVSTAVHIINRLPTPLLSRQTPFERL 462 Query: 848 YSKLPSYS 825 Y KLPSYS Sbjct: 463 YGKLPSYS 470 Score = 73.6 bits (179), Expect(2) = 2e-44 Identities = 34/84 (40%), Positives = 48/84 (57%) Frame = -3 Query: 1461 SNLLWHYRLGHLSEGRLQFLNQIHNEIKSDHSEHCIICPLSKQHKLPFPIHVAATQHIFQ 1282 S LWH RLGHLS RL F+ + + C +C L+KQ +LPF + ++ F+ Sbjct: 249 STALWHRRLGHLSSSRLDFMAKHLLNFHFQSNNACDVCALAKQRQLPFSVSSISSVRPFE 308 Query: 1281 SIHVDIWGPSNTITVHGHRYFLTM 1210 IH DIWGP ++ G +YFLT+ Sbjct: 309 LIHCDIWGPYKIASLSGAKYFLTI 332 Score = 58.2 bits (139), Expect(3) = 6e-17 Identities = 24/47 (51%), Positives = 30/47 (63%) Frame = -3 Query: 246 PKTYHEAAKFPEW*QVMKQELCALEEKNTWTLQSLPAGKHPIGCKWV 106 P +Y EA W + M+ EL LE +TW+L SLP GK PIGC+WV Sbjct: 630 PTSYAEATSHSHWQEAMQSELATLEANHTWSLTSLPPGKKPIGCRWV 676 Score = 50.8 bits (120), Expect(3) = 6e-17 Identities = 25/35 (71%), Positives = 28/35 (80%) Frame = -1 Query: 107 SDGNLERFKARLVAKVFTQQYVIDYIDSFSPVAKM 3 SDG +ERFKARLVAK +TQ IDY D+FSP AKM Sbjct: 683 SDGTIERFKARLVAKGYTQLEGIDYHDTFSPTAKM 717 Score = 26.6 bits (57), Expect(3) = 6e-17 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 13/46 (28%) Frame = -2 Query: 373 LKDFDCD--------PPVPQSP-----HTVAQVLSYDHFSPAHKSF 275 L+D+ C+ PP+ SP + + +SY +SP H+SF Sbjct: 575 LRDYVCNQVTSPNHLPPLSSSPQKGTRYPLCNFVSYHRYSPQHRSF 620 >ref|XP_004239452.1| PREDICTED: uncharacterized protein LOC101259633 [Solanum lycopersicum] Length = 1105 Score = 134 bits (338), Expect(3) = 1e-43 Identities = 67/132 (50%), Positives = 85/132 (64%), Gaps = 3/132 (2%) Frame = -1 Query: 1211 WGFLLHNKSSAKTKLRNFCIFIETQFQTKIQMVRSDNGMEFSMPD---FFDAKGIIHQMS 1041 W +LL KS+A L+ F IE QFQT ++ +RSDNG+EF+ + FF AKGI HQ S Sbjct: 685 WTYLLSTKSNAIQVLQTFINMIENQFQTNVKCIRSDNGLEFNNNEILRFFQAKGITHQKS 744 Query: 1040 CVYTLQQDGVVERKHQHLLNIGSALKIQSSLPLSYWGYCIKHAATLINLTPTPLLSNKAP 861 C YT QQ+ +VERKH++LL AL QS LP YWG CI + LIN P+ L NK P Sbjct: 745 CPYTPQQNSIVERKHRYLLETARALLFQSKLPTKYWGDCILTSTYLINRIPSTFLQNKCP 804 Query: 860 FEILYSKLPSYS 825 +E+LY + P YS Sbjct: 805 YEMLYKEKPKYS 816 Score = 67.8 bits (164), Expect(3) = 1e-43 Identities = 33/101 (32%), Positives = 59/101 (58%) Frame = -3 Query: 1512 SNYVSNTIHTQFNPKEVSNLLWHYRLGHLSEGRLQFLNQIHNEIKSDHSEHCIICPLSKQ 1333 +N +SN + + K+ +LLWH RLGH+ +++ + I + + C ICP+++Q Sbjct: 577 TNVLSNCASLE-SLKDDVDLLWHNRLGHVPFVKMKTIPTIPVKFSARQPFTCTICPMARQ 635 Query: 1332 HKLPFPIHVAATQHIFQSIHVDIWGPSNTITVHGHRYFLTM 1210 +LPF ++ IF +HV++WGP + T + RYF+T+ Sbjct: 636 TRLPFTHSTTHSKSIFDLLHVNLWGPYHVPTYNNCRYFITL 676 Score = 23.9 bits (50), Expect(3) = 1e-43 Identities = 23/77 (29%), Positives = 28/77 (36%), Gaps = 10/77 (12%) Frame = -3 Query: 822 LRVFGCLAYACTIDHGRSKFD----------PRGSNVYILVILILQKAIFF*TFIHSNFS 673 LR FGCL Y R K P G Y ++ L K Sbjct: 818 LRSFGCLCYPTLPKVHRDKLPRTTPHIFIGYPSGIKGYKVMSLATSKIQ----------- 866 Query: 672 CISRNVLSVEDNFPFCY 622 ISR+V+ ED FPF + Sbjct: 867 -ISRDVIFHEDIFPFSF 882 Score = 53.5 bits (127), Expect(2) = 1e-11 Identities = 24/47 (51%), Positives = 27/47 (57%) Frame = -3 Query: 246 PKTYHEAAKFPEW*QVMKQELCALEEKNTWTLQSLPAGKHPIGCKWV 106 P +Y EAA P W + M+QE AL TW L LP K IGCKWV Sbjct: 1019 PHSYEEAALIPAWQKAMEQEFDALHANRTWDLVILPVDKQDIGCKWV 1065 Score = 44.7 bits (104), Expect(2) = 1e-11 Identities = 19/34 (55%), Positives = 28/34 (82%) Frame = -1 Query: 107 SDGNLERFKARLVAKVFTQQYVIDYIDSFSPVAK 6 +DG++ERFKARLV K +TQ+ IDY +++SP+ K Sbjct: 1072 ADGSIERFKARLVVKRYTQRVGIDYTETYSPLLK 1105 >ref|XP_004252487.1| PREDICTED: uncharacterized protein LOC101249998 [Solanum lycopersicum] Length = 836 Score = 114 bits (284), Expect(3) = 2e-42 Identities = 57/132 (43%), Positives = 81/132 (61%), Gaps = 3/132 (2%) Frame = -1 Query: 1211 WGFLLHNKSSAKTKLRNFCIFIETQFQTKIQMVRSDNGMEF---SMPDFFDAKGIIHQMS 1041 W FL+ KS L++F I I+ QF +++ R DNG EF + D F + GI++Q S Sbjct: 527 WTFLIRLKSDVVVVLKHFLIMIKNQFGKCVKVFRYDNGGEFMNATCYDLFMSHGIVYQRS 586 Query: 1040 CVYTLQQDGVVERKHQHLLNIGSALKIQSSLPLSYWGYCIKHAATLINLTPTPLLSNKAP 861 C +T QQ+GV ERKH+HLL A+K+Q LP +WG CI+ A +IN P L ++ P Sbjct: 587 CPHTPQQNGVAERKHRHLLETARAIKLQGHLPNRFWGVCIEPATYIINRIPLSALKDRTP 646 Query: 860 FEILYSKLPSYS 825 FEI+Y++ P S Sbjct: 647 FEIMYNRQPLLS 658 Score = 66.6 bits (161), Expect(3) = 2e-42 Identities = 31/81 (38%), Positives = 46/81 (56%) Frame = -3 Query: 1452 LWHYRLGHLSEGRLQFLNQIHNEIKSDHSEHCIICPLSKQHKLPFPIHVAATQHIFQSIH 1273 LWH RLGH+ L+ + + N + +HC ICP ++Q ++PFP +F IH Sbjct: 439 LWHRRLGHVPMKVLRKIKEF-NTGSNFTIDHCHICPQARQTRMPFPNSSTNVNAVFDLIH 497 Query: 1272 VDIWGPSNTITVHGHRYFLTM 1210 +D+WGP T G +YFLT+ Sbjct: 498 MDVWGPYKVATHDGMKYFLTL 518 Score = 41.2 bits (95), Expect(3) = 2e-42 Identities = 25/68 (36%), Positives = 34/68 (50%) Frame = -3 Query: 831 LFFLRVFGCLAYACTIDHGRSKFDPRGSNVYILVILILQKAIFF*TFIHSNFSCISRNVL 652 L LRV GCL +A +D G KF+PR V ++ + QK F +SR+V+ Sbjct: 657 LSHLRVIGCLGFATNLDKG-DKFEPRAKRVVLMGYAMNQKGYKLLDIASQTF-FVSRDVV 714 Query: 651 SVEDNFPF 628 E FPF Sbjct: 715 FYEQEFPF 722 >dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana] Length = 1109 Score = 136 bits (343), Expect(3) = 4e-42 Identities = 67/130 (51%), Positives = 90/130 (69%), Gaps = 1/130 (0%) Frame = -1 Query: 1211 WGFLLHNKSSAKTKLRNFCIFIETQFQTKIQMVRSDNGMEF-SMPDFFDAKGIIHQMSCV 1035 W +L+ +KS + L++F +E QF T+I+ VRSDNG EF M ++F KGI H+ SCV Sbjct: 381 WVYLMTDKSETQKHLKDFIALVERQFDTEIKTVRSDNGTEFLCMREYFLHKGITHETSCV 440 Query: 1034 YTLQQDGVVERKHQHLLNIGSALKIQSSLPLSYWGYCIKHAATLINLTPTPLLSNKAPFE 855 T Q+G VERKH+H+LNI AL+ QS LP+ +WG CI AA LIN TP+ LL K+P+E Sbjct: 441 GTPHQNGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYE 500 Query: 854 ILYSKLPSYS 825 +LY P+YS Sbjct: 501 MLYKTAPNYS 510 Score = 58.9 bits (141), Expect(3) = 4e-42 Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 4/85 (4%) Frame = -3 Query: 1452 LWHYRLGHLSEGRLQFLNQIHNEIKSDHSEH----CIICPLSKQHKLPFPIHVAATQHIF 1285 LWH RLGH S+ + +N + E+ S E C C +KQ + FP+ + F Sbjct: 291 LWHRRLGHASD---KIVNLLPRELLSSGKEILENVCDTCMRAKQTRDTFPLSDNRSMDSF 347 Query: 1284 QSIHVDIWGPSNTITVHGHRYFLTM 1210 Q IH D+WGP T + G RYFLT+ Sbjct: 348 QLIHCDVWGPYRTPSYSGARYFLTI 372 Score = 25.4 bits (54), Expect(3) = 4e-42 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = -2 Query: 745 CVYLGHSDTTKGHILLDFHTQQFFM 671 CV++G+ KG L D Q+FF+ Sbjct: 538 CVFVGYPHGQKGWRLFDLEEQKFFV 562 Score = 40.0 bits (92), Expect(2) = 3e-06 Identities = 18/47 (38%), Positives = 27/47 (57%) Frame = -3 Query: 246 PKTYHEAAKFPEW*QVMKQELCALEEKNTWTLQSLPAGKHPIGCKWV 106 P TY+EA W + M E+ +L T+++ +LP GK +G KWV Sbjct: 600 PTTYNEAMVDKAWREAMSAEIESLRVNQTFSIVNLPPGKRALGNKWV 646 Score = 39.7 bits (91), Expect(2) = 3e-06 Identities = 19/35 (54%), Positives = 26/35 (74%) Frame = -1 Query: 107 SDGNLERFKARLVAKVFTQQYVIDYIDSFSPVAKM 3 SDG +ER+KARLV Q+ +DY ++F+PVAKM Sbjct: 653 SDGAIERYKARLVVLGNCQKEGVDYDETFAPVAKM 687 >emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana] gi|7269049|emb|CAB79159.1| LTR retrotransposon like protein [Arabidopsis thaliana] Length = 1109 Score = 136 bits (342), Expect(3) = 4e-42 Identities = 67/130 (51%), Positives = 89/130 (68%), Gaps = 1/130 (0%) Frame = -1 Query: 1211 WGFLLHNKSSAKTKLRNFCIFIETQFQTKIQMVRSDNGMEF-SMPDFFDAKGIIHQMSCV 1035 W +L+ +KS + L++F +E QF T+I+ VRSDNG EF M ++F KGI H+ SCV Sbjct: 381 WVYLMTDKSETQKHLKDFMALVERQFDTEIKTVRSDNGTEFLCMREYFLHKGIAHETSCV 440 Query: 1034 YTLQQDGVVERKHQHLLNIGSALKIQSSLPLSYWGYCIKHAATLINLTPTPLLSNKAPFE 855 T Q+G VERKH+H+LNI AL+ QS LP+ +WG CI AA LIN TP+ LL K+P+E Sbjct: 441 GTPHQNGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYE 500 Query: 854 ILYSKLPSYS 825 +LY P YS Sbjct: 501 MLYKTAPKYS 510 Score = 59.3 bits (142), Expect(3) = 4e-42 Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 4/85 (4%) Frame = -3 Query: 1452 LWHYRLGHLSEGRLQFLNQIHNEIKSDHSEH----CIICPLSKQHKLPFPIHVAATQHIF 1285 LWH RLGH S+ + +N + E+ S E C C +KQ + FP+ + F Sbjct: 291 LWHRRLGHASD---KIVNLLPRELLSSGKEILENVCDTCMRAKQTRDTFPLRDNRSMDSF 347 Query: 1284 QSIHVDIWGPSNTITVHGHRYFLTM 1210 Q IH D+WGP T + G RYFLT+ Sbjct: 348 QLIHCDVWGPYRTPSYSGARYFLTI 372 Score = 25.4 bits (54), Expect(3) = 4e-42 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = -2 Query: 745 CVYLGHSDTTKGHILLDFHTQQFFM 671 CV++G+ KG L D Q+FF+ Sbjct: 538 CVFVGYPHGQKGWRLFDLEEQKFFV 562 Score = 40.0 bits (92), Expect(2) = 3e-06 Identities = 18/47 (38%), Positives = 27/47 (57%) Frame = -3 Query: 246 PKTYHEAAKFPEW*QVMKQELCALEEKNTWTLQSLPAGKHPIGCKWV 106 P TY+EA W + M E+ +L T+++ +LP GK +G KWV Sbjct: 600 PTTYNEAMVDKAWREAMSAEIESLRVNQTFSIVNLPPGKRALGNKWV 646 Score = 39.7 bits (91), Expect(2) = 3e-06 Identities = 19/35 (54%), Positives = 26/35 (74%) Frame = -1 Query: 107 SDGNLERFKARLVAKVFTQQYVIDYIDSFSPVAKM 3 SDG +ER+KARLV Q+ +DY ++F+PVAKM Sbjct: 653 SDGAIERYKARLVVLGNCQKEGVDYDETFAPVAKM 687 >gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana] Length = 1468 Score = 137 bits (344), Expect(3) = 1e-41 Identities = 67/130 (51%), Positives = 90/130 (69%), Gaps = 1/130 (0%) Frame = -1 Query: 1211 WGFLLHNKSSAKTKLRNFCIFIETQFQTKIQMVRSDNGMEF-SMPDFFDAKGIIHQMSCV 1035 W +L+ +KS + L++F +E QF T+I++VRSDNG EF M ++F KGI H+ SCV Sbjct: 605 WVYLMTDKSETQKHLKDFIALVERQFDTEIKIVRSDNGTEFLCMREYFLHKGIAHETSCV 664 Query: 1034 YTLQQDGVVERKHQHLLNIGSALKIQSSLPLSYWGYCIKHAATLINLTPTPLLSNKAPFE 855 T Q+G VERKH+H+LNI AL+ QS LP+ +WG CI AA LIN TP+ LL K+P+E Sbjct: 665 GTPHQNGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYE 724 Query: 854 ILYSKLPSYS 825 +LY P YS Sbjct: 725 MLYKTAPKYS 734 Score = 57.0 bits (136), Expect(3) = 1e-41 Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 4/85 (4%) Frame = -3 Query: 1452 LWHYRLGHLSEGRLQFLNQIHNEIKSDHSEH----CIICPLSKQHKLPFPIHVAATQHIF 1285 LWH RLGH S+ + +N + E+ S E C C +KQ + FP+ + F Sbjct: 515 LWHRRLGHASD---KIVNLLPRELLSSGKEILENVCDTCMRAKQTRDTFPLSDNRSMDSF 571 Query: 1284 QSIHVDIWGPSNTITVHGHRYFLTM 1210 Q IH D+WGP + G RYFLT+ Sbjct: 572 QLIHCDVWGPYRAPSYSGARYFLTI 596 Score = 25.4 bits (54), Expect(3) = 1e-41 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = -2 Query: 745 CVYLGHSDTTKGHILLDFHTQQFFM 671 CV++G+ KG L D Q+FF+ Sbjct: 762 CVFVGYPHGQKGWRLFDLEEQKFFV 786 Score = 40.0 bits (92), Expect(2) = 3e-06 Identities = 18/47 (38%), Positives = 27/47 (57%) Frame = -3 Query: 246 PKTYHEAAKFPEW*QVMKQELCALEEKNTWTLQSLPAGKHPIGCKWV 106 P TY+EA W + M E+ +L T+++ +LP GK +G KWV Sbjct: 959 PTTYNEAMVDKAWREAMSAEIESLRVNQTFSIVNLPPGKRALGNKWV 1005 Score = 39.7 bits (91), Expect(2) = 3e-06 Identities = 19/35 (54%), Positives = 26/35 (74%) Frame = -1 Query: 107 SDGNLERFKARLVAKVFTQQYVIDYIDSFSPVAKM 3 SDG +ER+KARLV Q+ +DY ++F+PVAKM Sbjct: 1012 SDGAIERYKARLVVLGNCQKEGVDYDETFAPVAKM 1046 >gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana] Length = 1436 Score = 112 bits (279), Expect(3) = 2e-41 Identities = 57/129 (44%), Positives = 75/129 (58%) Frame = -1 Query: 1211 WGFLLHNKSSAKTKLRNFCIFIETQFQTKIQMVRSDNGMEFSMPDFFDAKGIIHQMSCVY 1032 W +LL KS T +F +ETQ+ TK+ VRSDN E + F +GI C Sbjct: 649 WIYLLKQKSDVLTVFPSFLKMVETQYHTKVCSVRSDNAHELKFNELFAKEGIKADHPCPE 708 Query: 1031 TLQQDGVVERKHQHLLNIGSALKIQSSLPLSYWGYCIKHAATLINLTPTPLLSNKAPFEI 852 T +Q+ VVERKHQHLLN+ AL QS +PL YWG C+ A LIN +P+++N+ P+E Sbjct: 709 TPEQNFVVERKHQHLLNVARALMFQSGIPLEYWGDCVLTAVFLINRLLSPVINNETPYER 768 Query: 851 LYSKLPSYS 825 L P YS Sbjct: 769 LTKGKPDYS 777 Score = 67.8 bits (164), Expect(3) = 2e-41 Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 4/85 (4%) Frame = -3 Query: 1452 LWHYRLGHLSEGRLQFLNQI----HNEIKSDHSEHCIICPLSKQHKLPFPIHVAATQHIF 1285 +WH RLGH S ++ L+ + +I D S HC +C LSKQ LPF + F Sbjct: 557 MWHKRLGHPSFAKIDTLSDVLMLPKQKINKD-SSHCHVCHLSKQKHLPFKSVNHIREKAF 615 Query: 1284 QSIHVDIWGPSNTITVHGHRYFLTM 1210 + +H+D WGP + TV +RYFLT+ Sbjct: 616 ELVHIDTWGPFSVPTVDSYRYFLTI 640 Score = 38.9 bits (89), Expect(3) = 2e-41 Identities = 25/65 (38%), Positives = 32/65 (49%) Frame = -3 Query: 822 LRVFGCLAYACTIDHGRSKFDPRGSNVYILVILILQKAIFF*TFIHSNFSCISRNVLSVE 643 L+ FGCL Y T R+KFDPR L + K + I + ISR+V+ E Sbjct: 779 LKAFGCLCYCSTSPKSRTKFDPRAKACIFLGYPMGYKG-YKLLDIETYSVSISRHVIFYE 837 Query: 642 DNFPF 628 D FPF Sbjct: 838 DIFPF 842 Score = 49.3 bits (116), Expect(2) = 1e-10 Identities = 23/35 (65%), Positives = 30/35 (85%) Frame = -1 Query: 107 SDGNLERFKARLVAKVFTQQYVIDYIDSFSPVAKM 3 +DG++ER KARLVAK +TQQ ID+ ++FSPVAKM Sbjct: 1006 ADGSIERHKARLVAKGYTQQEGIDFFNTFSPVAKM 1040 Score = 45.4 bits (106), Expect(2) = 1e-10 Identities = 19/47 (40%), Positives = 26/47 (55%) Frame = -3 Query: 246 PKTYHEAAKFPEW*QVMKQELCALEEKNTWTLQSLPAGKHPIGCKWV 106 P+ Y EA W M +E+ A TW++ LPAGK +GCKW+ Sbjct: 953 PQKYSEARLDKVWNDAMGKEISAFVRTGTWSICDLPAGKVAVGCKWI 999 >emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera] Length = 1316 Score = 133 bits (334), Expect(3) = 2e-41 Identities = 62/131 (47%), Positives = 86/131 (65%), Gaps = 3/131 (2%) Frame = -1 Query: 1211 WGFLLHNKSSAKTKLRNFCIFIETQFQTKIQMVRSDNGMEF---SMPDFFDAKGIIHQMS 1041 W +L+ KS K L+NFC +TQF ++ +RSDNG+EF M F+ +GI+ + S Sbjct: 478 WIYLMKEKSETKDILQNFCFMTKTQFDKPVKCIRSDNGLEFCXGQMMSFYKREGILRESS 537 Query: 1040 CVYTLQQDGVVERKHQHLLNIGSALKIQSSLPLSYWGYCIKHAATLINLTPTPLLSNKAP 861 V T Q +G VERKHQH+LNI L+ Q+ LP+ +WG C+ AA LIN TPTP+L K P Sbjct: 538 LVNTPQXNGRVERKHQHILNIARTLRFQACLPIDFWGECVLTAAYLINRTPTPILDGKTP 597 Query: 860 FEILYSKLPSY 828 +EIL+ + P+Y Sbjct: 598 YEILFGEKPNY 608 Score = 59.3 bits (142), Expect(3) = 2e-41 Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 1/82 (1%) Frame = -3 Query: 1452 LWHYRLGHLSEGRLQFLNQIHNEIKSDHSEH-CIICPLSKQHKLPFPIHVAATQHIFQSI 1276 LWH RLGH S+ L ++ + N + ++ C C KQ + F + IF I Sbjct: 388 LWHRRLGHPSDRVLASIHSLGNNVMKGIEDYVCDSCCRGKQVRNSFQLSNKRAFEIFNLI 447 Query: 1275 HVDIWGPSNTITVHGHRYFLTM 1210 HVDIWGP T T G YFLT+ Sbjct: 448 HVDIWGPYRTPTTSGAHYFLTI 469 Score = 26.2 bits (56), Expect(3) = 2e-41 Identities = 21/66 (31%), Positives = 27/66 (40%) Frame = -3 Query: 822 LRVFGCLAYACTIDHGRSKFDPRGSNVYILVILILQKAIFF*TFIHSNFSCISRNVLSVE 643 LRVFG L YA KFD R +K + + + SR+V+ E Sbjct: 611 LRVFGSLCYAHKKSRSNDKFDXRSRRCXFXGYPYGKKG-WKLXDLETKEQFESRDVIFHE 669 Query: 642 DNFPFC 625 FPFC Sbjct: 670 TIFPFC 675 Score = 48.9 bits (115), Expect(2) = 4e-11 Identities = 21/47 (44%), Positives = 27/47 (57%) Frame = -3 Query: 246 PKTYHEAAKFPEW*QVMKQELCALEEKNTWTLQSLPAGKHPIGCKWV 106 P+TY EA W + M +E+ ALE TW + LP K IGCKW+ Sbjct: 807 PRTYKEAVXDNRWREAMAKEIEALETNQTWKVVDLPPEKKAIGCKWI 853 Score = 47.4 bits (111), Expect(2) = 4e-11 Identities = 23/35 (65%), Positives = 29/35 (82%) Frame = -1 Query: 107 SDGNLERFKARLVAKVFTQQYVIDYIDSFSPVAKM 3 +DG++ER+KARLVA+ FTQ IDY + FSPVAKM Sbjct: 860 ADGSIERYKARLVAQGFTQIEGIDYQEXFSPVAKM 894 >dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana] Length = 1475 Score = 127 bits (318), Expect(2) = 2e-40 Identities = 61/129 (47%), Positives = 83/129 (64%) Frame = -1 Query: 1211 WGFLLHNKSSAKTKLRNFCIFIETQFQTKIQMVRSDNGMEFSMPDFFDAKGIIHQMSCVY 1032 W +L+ K+ +F +ETQ+ T ++ VRSDN E + AKGII SC Sbjct: 676 WVYLMKAKNDVLQIFPDFLKMVETQYGTLVKAVRSDNAPELRFEALYQAKGIISYHSCPE 735 Query: 1031 TLQQDGVVERKHQHLLNIGSALKIQSSLPLSYWGYCIKHAATLINLTPTPLLSNKAPFEI 852 T QQ+ VVERKHQH+LN+ AL ++++PL +WG CI A LIN PTPLLSNK+PFE+ Sbjct: 736 TPQQNSVVERKHQHILNVARALMFEANMPLEFWGDCILSAVFLINRLPTPLLSNKSPFEL 795 Query: 851 LYSKLPSYS 825 L+ K+P Y+ Sbjct: 796 LHLKVPDYT 804 Score = 67.8 bits (164), Expect(2) = 2e-40 Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 2/99 (2%) Frame = -3 Query: 1500 SNTIHTQFNPKEVSNLLWHYRLGHLSEGRLQFLNQIHNEIKSDHSE--HCIICPLSKQHK 1327 S+ Q+ V + LWH RLGH S + L+ + K + + HC IC +KQ Sbjct: 569 SSVTEKQYCNAVVDSALWHSRLGHPSYEKNDVLHDVLGLPKRNKEDLVHCSICQKAKQKH 628 Query: 1326 LPFPIHVAATQHIFQSIHVDIWGPSNTITVHGHRYFLTM 1210 L FP +++ F IH+D WGP T T G++YFLT+ Sbjct: 629 LSFPSKNNMSENKFDLIHIDTWGPFATPTTEGYKYFLTI 667 Score = 60.5 bits (145), Expect(2) = 2e-16 Identities = 27/47 (57%), Positives = 32/47 (68%) Frame = -3 Query: 246 PKTYHEAAKFPEW*QVMKQELCALEEKNTWTLQSLPAGKHPIGCKWV 106 P TY +A K EW M+ E+ ALE NTW++ SLP GK PIGCKWV Sbjct: 960 PCTYAQAKKIKEWLDAMEIEIDALESTNTWSVCSLPQGKKPIGCKWV 1006 Score = 53.5 bits (127), Expect(2) = 2e-16 Identities = 25/35 (71%), Positives = 31/35 (88%) Frame = -1 Query: 107 SDGNLERFKARLVAKVFTQQYVIDYIDSFSPVAKM 3 +DG+LERFKARLVAK +TQ+ +DY D+FSPVAKM Sbjct: 1013 ADGSLERFKARLVAKGYTQREGLDYYDTFSPVAKM 1047