BLASTX nr result
ID: Catharanthus22_contig00013990
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00013990
(1201 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665... 90 1e-31
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664... 92 2e-28
ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein A... 84 2e-22
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663... 86 3e-22
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 90 4e-22
ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660... 83 7e-21
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 87 1e-20
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 87 1e-20
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268... 79 4e-20
emb|CAB72467.1| putative protein [Arabidopsis thaliana] 82 8e-20
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] 80 8e-19
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ... 76 1e-18
gb|ABD96948.1| hypothetical protein [Cleome spinosa] 99 3e-18
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 88 4e-18
gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thali... 78 5e-18
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta... 87 8e-18
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 76 1e-17
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 74 5e-17
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 74 7e-17
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 83 1e-16
>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
Length = 506
Score = 90.1 bits (222), Expect(2) = 1e-31
Identities = 54/171 (31%), Positives = 83/171 (48%), Gaps = 29/171 (16%)
Frame = +2
Query: 2 CEKLKISHLACADDLVIFSRGDYLSVQVLCEVLKAFGGVSGLKVNPTKFNVFLASMDEEE 181
C+KLKI++L ADDL++FSRGD +SV ++ ++F +GL VNP K ++ A +D
Sbjct: 64 CDKLKITNLCFADDLLLFSRGDKISVGMMMRAYESFSKATGLLVNPQKCSLLCAGIDAVT 123
Query: 182 RNLITNSIGFFVGAMPFRYSGILLAGVYLKLADYAPLIDKVSKTLLAWQDLI-------- 337
+ I GF G +PF+Y G+ + L Y+PLIDK+ + W +
Sbjct: 124 KREILEVSGFQEGQLPFKYLGVPVTSKKLSTIHYSPLIDKIVGKIKHWTARLLSYAGRLQ 183
Query: 338 ----------------FHMSAAVLDRFISLCCQFLWGGNY-----ARVAWK 427
F +VL + ++C FLW G + + VAWK
Sbjct: 184 LVNSVMFALTNYWLNCFPFPKSVLQKIEAICRIFLWTGGFEGSRKSPVAWK 234
Score = 74.7 bits (182), Expect(2) = 1e-31
Identities = 59/229 (25%), Positives = 93/229 (40%), Gaps = 3/229 (1%)
Frame = +1
Query: 454 GLGLRDIRSWNDALLTKTLWNVLDKKDTLWCRWIHHVCVKSDWTCRRKRIXXXXXXXXXX 633
GL + DI WN A L K LWN+ K+D+LW +WI VK R + +
Sbjct: 244 GLNIIDIDIWNKANLMKLLWNLSSKEDSLWVKWIQAYYVK-----RSELMHIEMKNTDSW 298
Query: 634 XXXXXXKLRVPLQMSLVTYLLGISGSLDTSLAYDFFRPMEQRKIWHRIVWNSINLPKFFF 813
K R L+ L I GS++ Y + QRK W +++ + P+ F
Sbjct: 299 IMKAILKQREDLEKIDNMEELMIRGSINMGKLYRKLQDCGQRKEWKNLLYGNTARPRANF 358
Query: 814 YILVCCYGMISYDGQTF---FLVG*SDLQALQPDGRDTLTFVLCLSFC*EVWRHIREWSG 984
+ + C+G +S + + S + + + L FV S VW + +W
Sbjct: 359 ILWLACHGRLSTKDRLCKYGMIDDKSCCFCSEEESMNHLFFVCDNSK--RVWMEVLQWVQ 416
Query: 985 LKRSMSTIQMSLKWLLKESRGSTWKCKWRKLCFAATLYYFLQCRNKVIF 1131
++ S L WL ++G + K+ A T+Y RN IF
Sbjct: 417 IRHDPSDWPNELHWLTHHTKGKGTRAAVLKMAIAETIYEIWNIRNNKIF 465
>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
Length = 939
Score = 92.4 bits (228), Expect(2) = 2e-28
Identities = 58/159 (36%), Positives = 81/159 (50%), Gaps = 24/159 (15%)
Frame = +2
Query: 2 CEKLKISHLACADDLVIFSRGDYLSVQVLCEVLKAFGGVSGLKVNPTKFNVFLASMDEEE 181
CEK+KI++L ADDL++FSRGD SVQ++ + F GL VNP+K N++ S+D
Sbjct: 506 CEKMKITNLCFADDLLLFSRGDIGSVQIMLDKFNTFLRSMGLHVNPSKCNIYCGSVDINV 565
Query: 182 RNLITNSIGFFVGAMPFRYSGILLAGVYLKLADYAPLIDKVSKTLLAW------------ 325
+ + GF G MPFRY GI L+ L + Y LIDK+ + W
Sbjct: 566 KEQLLLISGFKEGKMPFRYLGIPLSSKKLNIKHYQVLIDKIVGRITHWSAGLLSYAGRVQ 625
Query: 326 --QDLI-----FHMSAAVLDRFI-----SLCCQFLWGGN 406
Q +I F M L +F+ ++C FLW GN
Sbjct: 626 LIQSVIFATINFWMQCLPLPKFVIMRINAICRSFLWIGN 664
Score = 61.6 bits (148), Expect(2) = 2e-28
Identities = 50/230 (21%), Positives = 90/230 (39%), Gaps = 4/230 (1%)
Frame = +1
Query: 454 GLGLRDIRSWNDALLTKTLWNVLDKKDTLWCRWIH--HVCVKSDWTCRRKRIXXXXXXXX 627
GL + ++ WN + K LWNV +K D LW +W+H ++ +S W+ K+
Sbjct: 686 GLNIINLAIWNKISILKLLWNVCNKSDNLWIKWLHTYYIRGQSIWSMVLKK-------SH 738
Query: 628 XXXXXXXXKLRVPLQMSLVTYLLGISGSLDTSLAYDFFRPMEQRKIWHRIVWNSINLPKF 807
KLR PL L+ Y + Y ++ W ++ N++ P+
Sbjct: 739 SWIMSSMMKLR-PL---LLQYQSRMQDVFKMKKIYLALFEESEKMSWRTLMCNNLARPRA 794
Query: 808 FFYILVCCYGMISYDGQ--TFFLVG*SDLQALQPDGRDTLTFVLCLSFC*EVWRHIREWS 981
F + C+ ++ + F L ++ F C+ +W + W
Sbjct: 795 LFCLWQACHFRLASKDRLIKFGLNVDANCAFCSSMESHEHLFFGCIELK-TIWTAVLNWL 853
Query: 982 GLKRSMSTIQMSLKWLLKESRGSTWKCKWRKLCFAATLYYFLQCRNKVIF 1131
+ ST L W+ ++ +G W+ K F T+Y+ RN +F
Sbjct: 854 QIIHMPSTWSEELNWITRKCKGKGWRAMLLKCAFTETIYHIWAYRNHRVF 903
>ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 316
Score = 84.0 bits (206), Expect(3) = 2e-22
Identities = 54/170 (31%), Positives = 77/170 (45%), Gaps = 29/170 (17%)
Frame = +2
Query: 2 CEKLKISHLACADDLVIFSRGDYLSVQVLCEVLKAFGGVSGLKVNPTKFNVFLASMDEEE 181
C +++SHLA ADD+++ SRGD + + L+ F VSGL ++ K ++ A + E
Sbjct: 49 CAGIQLSHLAFADDIMLLSRGDIPYMSTMFAKLQHFCRVSGLSISSDKSAIYSAGIRPYE 108
Query: 182 RNLITNSIGFFVGAMPFRYSGILLAGVYLKLADYAPLIDKVSKTLLAWQD---------- 331
+ I GF +G PFRY G L L + YAPL+ K+ + W
Sbjct: 109 LSHIQQLTGFSLGGFPFRYLGAPLLSSRLNVCHYAPLLYKIVGLIQGWNKKSLSYVGKLE 168
Query: 332 --------------LIFHMSAAVLDRFISLCCQFLW-----GGNYARVAW 424
IF + +VLDR + CC FLW G N VAW
Sbjct: 169 LIKAVIQGIMNFWMRIFPLPQSVLDRINASCCNFLWSKADIGKNKPLVAW 218
Score = 45.8 bits (107), Expect(3) = 2e-22
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +1
Query: 454 GLGLRDIRSWNDALLTKTLWNVLDKKDTLWCRWIHH 561
GLGL +++ WN ALL+ LW+ KKD+L RW+HH
Sbjct: 229 GLGLFNLKDWNLALLSHILWDFHCKKDSLRVRWVHH 264
Score = 24.3 bits (51), Expect(3) = 2e-22
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 615 VKRIISIRDKIIEVEGSTPNVIGHLSSW 698
+K+II IRD II E S + SW
Sbjct: 285 IKKIIQIRDFIISKELSMEETKKRIQSW 312
>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
Length = 514
Score = 85.9 bits (211), Expect(2) = 3e-22
Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 29/171 (16%)
Frame = +2
Query: 2 CEKLKISHLACADDLVIFSRGDYLSVQVLCEVLKAFGGVSGLKVNPTKFNVFLASMDEEE 181
CE+L I+HL+ ADD+ + RGD S++++ + F +GL++NP K VF ++ +
Sbjct: 167 CERLGITHLSFADDVFLLCRGDKKSIKMIIKAFSFFSKSTGLQINPAKCKVFCGGLNCDS 226
Query: 182 RNLITNSIGFFVGAMPFRYSGILLAGVYLKLADYAPLIDKVSKTLLAWQD---------- 331
+IT GF G +P RY G+ L+ L + Y PL++K+ + W
Sbjct: 227 IQVITKITGFEEGTLPVRYLGVPLSCKKLNVHHYLPLVEKIVGKIRHWSSKLLSIAGRIQ 286
Query: 332 --------------LIFHMSAAVLDRFISLCCQFLWGGN-----YARVAWK 427
+F M V+ + S+C F+W G+ + VAWK
Sbjct: 287 LVRSIITAIAQYWMSVFPMPKKVIQKIDSICRSFIWSGSAEVKRKSLVAWK 337
Score = 47.4 bits (111), Expect(2) = 3e-22
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +1
Query: 454 GLGLRDIRSWNDALLTKTLWNVLDKKDTLWCRWIHHVCVKSD 579
GL L ++ WN + K LWN+ K+D LW +WIH +K D
Sbjct: 347 GLNLINLELWNVTAMLKCLWNICSKEDNLWVKWIHAYFLKGD 388
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 90.1 bits (222), Expect(2) = 4e-22
Identities = 58/174 (33%), Positives = 88/174 (50%), Gaps = 29/174 (16%)
Frame = +2
Query: 11 LKISHLACADDLVIFSRGDYLSVQVLCEVLKAFGGVSGLKVNPTKFNVFLASMDEEERNL 190
L ISHL ADD++IF G S+ +CE L F SGLKVN K +++LA +++ E N
Sbjct: 690 LSISHLMFADDVMIFFDGGSFSLHGICETLDDFASWSGLKVNKDKSHLYLAGLNQLESN- 748
Query: 191 ITNSIGFFVGAMPFRYSGILLAGVYLKLADYAPLIDKVSKTLLAWQD------------- 331
+ GF +G +P RY G+ L L++A+Y PL++K++ +W +
Sbjct: 749 ANAAYGFPIGTLPIRYLGLPLMNRKLRIAEYEPLLEKITARFRSWVNKCLSFAGRIQLIS 808
Query: 332 ------LIFHMSAAVL-----DRFISLCCQFLWGGNY-----ARVAWKTM*LSR 445
+ F MS +L R SLC +FLW GN +V+W + L +
Sbjct: 809 SVIFGSINFWMSTFLLPKGCIKRIESLCSRFLWSGNIEQAKGIKVSWAALCLPK 862
Score = 42.7 bits (99), Expect(2) = 4e-22
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +1
Query: 454 GLGLRDIRSWNDALLTKTLWNVLDKKDTLWCRW--IHHVCVKSDW 582
GLGLR + WN L + +W + KD+LW W +HH+ S W
Sbjct: 866 GLGLRRLLEWNKTLSMRLIWRLFVAKDSLWADWQHLHHLSRGSFW 910
>ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660482 [Glycine max]
Length = 303
Score = 82.8 bits (203), Expect(3) = 7e-21
Identities = 48/157 (30%), Positives = 75/157 (47%), Gaps = 24/157 (15%)
Frame = +2
Query: 2 CEKLKISHLACADDLVIFSRGDYLSVQVLCEVLKAFGGVSGLKVNPTKFNVFLASMDEEE 181
C +++SHLA DD+++ SRGD S+ + L+ F V GL ++ K +++ +S+ E
Sbjct: 16 CAGIQLSHLAFVDDIMLLSRGDIPSMSTMFAKLQHFCRVLGLSISSDKSSIYSSSIRTHE 75
Query: 182 RNLITNSIGFFVGAMPFRYSGILLAGVYLKLADYAPLIDKVSKTLLAWQDL--------- 334
+ I GF +G PFRY G+ L L + YAPL+ K++ + W
Sbjct: 76 LSHIQQLTGFSLGGFPFRYLGVPLLSSRLNVCHYAPLLSKITGLIQGWSRKSLSYAGKLE 135
Query: 335 ---------------IFHMSAAVLDRFISLCCQFLWG 400
IF + +VLDR + C FLWG
Sbjct: 136 LIRAVIQGIVNFWIGIFPLPQSVLDRINASCRNFLWG 172
Score = 39.3 bits (90), Expect(3) = 7e-21
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +1
Query: 454 GLGLRDIRSWNDALLTKTLWNVLDKKDTLWCRWIHH 561
GLGL +++ WN ALL+ LW+ KKD+L W+HH
Sbjct: 196 GLGLFNLKDWNLALLSCILWDFHCKKDSL---WVHH 228
Score = 26.6 bits (57), Expect(3) = 7e-21
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 615 VKRIISIRDKIIEVEGSTPNVIGHLSSW 698
+K+II IRD II E ST + SW
Sbjct: 249 IKKIIQIRDFIISKELSTEEAKKRIQSW 276
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 87.0 bits (214), Expect(2) = 1e-20
Identities = 59/167 (35%), Positives = 83/167 (49%), Gaps = 29/167 (17%)
Frame = +2
Query: 11 LKISHLACADDLVIFSRGDYLSVQVLCEVLKAFGGVSGLKVNPTKFNVFLASMDEEERNL 190
L ISHL ADD++IF G S+ +CE L F SGLKVN K +F A +D ER +
Sbjct: 550 LSISHLMFADDVMIFFDGGSSSMHGICETLDDFADWSGLKVNKDKSQLFQAGLDLSER-I 608
Query: 191 ITNSIGFFVGAMPFRYSGILLAGVYLKLADYAPLIDKVSKTLLAWQD------------- 331
+ + GF G P RY G+ L L++ADY PL++K+S L +W
Sbjct: 609 TSAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQLIS 668
Query: 332 ------LIFHMSAAVL-----DRFISLCCQFLWGGNY-----ARVAW 424
+ F MS +L + SLC +FLW G+ ++V+W
Sbjct: 669 SVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSW 715
Score = 40.8 bits (94), Expect(2) = 1e-20
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +1
Query: 415 CCLEDYVTK*GAWGLGLRDIRSWNDALLTKTLWNVLDKKDTLWCRWIHH 561
CCL GLG R WN LL + +W + D+ +LW +W H
Sbjct: 718 CCLPK-----SEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRH 761
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 87.0 bits (214), Expect(2) = 1e-20
Identities = 59/167 (35%), Positives = 83/167 (49%), Gaps = 29/167 (17%)
Frame = +2
Query: 11 LKISHLACADDLVIFSRGDYLSVQVLCEVLKAFGGVSGLKVNPTKFNVFLASMDEEERNL 190
L ISHL ADD++IF G S+ +CE L F SGLKVN K +F A +D ER +
Sbjct: 550 LSISHLMFADDVMIFFDGGSSSMHGICETLDDFADWSGLKVNKDKSQLFQAGLDLSER-I 608
Query: 191 ITNSIGFFVGAMPFRYSGILLAGVYLKLADYAPLIDKVSKTLLAWQD------------- 331
+ + GF G P RY G+ L L++ADY PL++K+S L +W
Sbjct: 609 TSAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQLIS 668
Query: 332 ------LIFHMSAAVL-----DRFISLCCQFLWGGNY-----ARVAW 424
+ F MS +L + SLC +FLW G+ ++V+W
Sbjct: 669 SVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSW 715
Score = 40.8 bits (94), Expect(2) = 1e-20
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +1
Query: 415 CCLEDYVTK*GAWGLGLRDIRSWNDALLTKTLWNVLDKKDTLWCRWIHH 561
CCL GLG R WN LL + +W + D+ +LW +W H
Sbjct: 718 CCLPK-----SEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRH 761
>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
lycopersicum]
Length = 717
Score = 79.0 bits (193), Expect(2) = 4e-20
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 29/168 (17%)
Frame = +2
Query: 8 KLKISHLACADDLVIFSRGDYLSVQVLCEVLKAFGGVSGLKVNPTKFNVFLASMDEEERN 187
KL ++HL ADDL++FSRGD S++ L + F SGL+ N K +++ + E R
Sbjct: 488 KLDVTHLCFADDLLLFSRGDLNSIKALQKCFTEFSQASGLQANLNKSSIYCGGVQMEVRQ 547
Query: 188 LITNSIGFFVGAMPFRYSGILLAGVYLKLADYAPLIDKVSKTLLAW-------------- 325
I +G+ + +PF+Y G+ L+ L + PLI+KV + +W
Sbjct: 548 QIIQQLGYTIEELPFKYLGVPLSSKKLNTIQWYPLIEKVMARINSWTAKKLSYAGRAQLV 607
Query: 326 QDLIFHMSAAVLDRFI----------SLCCQFLWGG-----NYARVAW 424
+ ++F + A FI LC +LW G A +AW
Sbjct: 608 KTVLFGVQALWAQLFIIPAKIIKLIEGLCRSYLWSGVGYVTKKALIAW 655
Score = 47.0 bits (110), Expect(2) = 4e-20
Identities = 17/40 (42%), Positives = 28/40 (70%)
Frame = +1
Query: 454 GLGLRDIRSWNDALLTKTLWNVLDKKDTLWCRWIHHVCVK 573
GLGL +++ WN + +TK W++ +K+D LW +WIH +K
Sbjct: 666 GLGLINLKIWNRSAVTKLCWDLANKEDKLWIKWIHAYYIK 705
>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
Length = 762
Score = 81.6 bits (200), Expect(2) = 8e-20
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 29/170 (17%)
Frame = +2
Query: 2 CEKLKISHLACADDLVIFSRGDYLSVQVLCEVLKAFGGVSGLKVNPTKFNVFLASMDEEE 181
C+++ ++HL+ ADDL+I + G S++ + EV F SGLK++ K +F A +
Sbjct: 246 CKRMGLTHLSFADDLMILTDGQCRSIEGIIEVFDLFSKWSGLKISMEKSTIFSAGLSSTS 305
Query: 182 RNLITNSIGFFVGAMPFRYSGILLAGVYLKLADYAPLIDKVSKTLLAWQDLI-------- 337
R + F VG +P RY G+ L L DYAPLI+++ K + +W
Sbjct: 306 RAQLHTHFPFEVGELPIRYLGLPLVTKRLSSVDYAPLIEQIRKRIGSWSSRFLSFAGRFN 365
Query: 338 ----------------FHMSAAVLDRFISLCCQFLWGG-----NYARVAW 424
F + A + LC FLW G A+++W
Sbjct: 366 LISSIIWSSCNFWLSAFQLPRACIQEIEKLCSSFLWSGTNLNSKKAKISW 415
Score = 43.5 bits (101), Expect(2) = 8e-20
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +1
Query: 454 GLGLRDIRSWNDALLTKTLWNVLDKKDTLWCRWIHHVCVKSD 579
GLGLR ++ ND K +W ++ D+LW +W+ H +K +
Sbjct: 426 GLGLRSLKEANDVCCLKLVWRIISHGDSLWVKWVEHNLLKRE 467
>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
Length = 653
Score = 80.1 bits (196), Expect(2) = 8e-19
Identities = 52/170 (30%), Positives = 78/170 (45%), Gaps = 29/170 (17%)
Frame = +2
Query: 2 CEKLKISHLACADDLVIFSRGDYLSVQVLCEVLKAFGGVSGLKVNPTKFNVFLASMDEEE 181
C++L ++HL+ ADDL++ S G S+ + EV F SGLK++ K ++LA + E+
Sbjct: 220 CKELSLTHLSFADDLMVLSDGKVRSIDGIVEVFDIFAKFSGLKISMEKSTIYLAGVTEDV 279
Query: 182 RNLITNSIGFFVGAMPFRYSGILLAGVYLKLADYAPLIDKVSK----------------- 310
+ I N F VG +P RY G+ L L DY+PL++ + K
Sbjct: 280 YHEIQNRYQFDVGQLPVRYLGLPLVTKRLTATDYSPLLEHIKKKIGTWTTRYLSYAGRLN 339
Query: 311 --TLLAWQDLIFHMSAAVLDR-----FISLCCQFLWGG-----NYARVAW 424
T + W F ++A L R +C FLW G RV W
Sbjct: 340 LITSVLWSICNFWLAAFRLPRECIREIDKICSAFLWSGPDLNPRKTRVCW 389
Score = 41.6 bits (96), Expect(2) = 8e-19
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 454 GLGLRDIRSWNDALLTKTLWNVLDKKDTLWCRWIHHVCVKSD 579
GLGLR ++ N+ K +W ++ ++LW RWI +K D
Sbjct: 400 GLGLRSLKEMNEVSCLKLIWRIVSHTNSLWVRWIEQYLLKHD 441
>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 489
Score = 75.9 bits (185), Expect(2) = 1e-18
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 29/170 (17%)
Frame = +2
Query: 2 CEKLKISHLACADDLVIFSRGDYLSVQVLCEVLKAFGGVSGLKVNPTKFNVFLASMDEEE 181
C+++ ++HL+ ADDL++ S G S++ + EV + F SGL+++ K V+ A +
Sbjct: 75 CKQMGLTHLSFADDLMVLSDGKVRSIEGIVEVFETFAKCSGLRISMEKSTVYFAGLSHTS 134
Query: 182 RNLITNSIGFFVGAMPFRYSGILLAGVYLKLADYAPLIDKVSKTLLAWQ----------D 331
+ F VG +P RY G+ L L DY PLI+ + K + +W +
Sbjct: 135 PQEVMAHFPFAVGTLPVRYLGLPLVTKQLSSTDYLPLIEHIKKKIGSWSARFLSYAGRLN 194
Query: 332 LI---------FHMSAAVLDR-----FISLCCQFLWGG-----NYARVAW 424
LI F M A L R +C +LW G + A++AW
Sbjct: 195 LISSVLWSICNFWMGAFRLPRECIREIDKMCSAYLWSGGDLNTSKAKIAW 244
Score = 45.4 bits (106), Expect(2) = 1e-18
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 454 GLGLRDIRSWNDALLTKTLWNVLDKKDTLWCRWIHHVCVK--SDWTCR 591
GLGLR ++ ND K +W ++ D+LW +WIH +K S W R
Sbjct: 255 GLGLRSLKEANDVSCLKLIWRIISHADSLWVKWIHATLLKQVSFWAVR 302
>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
Length = 539
Score = 99.0 bits (245), Expect = 3e-18
Identities = 101/371 (27%), Positives = 160/371 (43%), Gaps = 50/371 (13%)
Frame = +2
Query: 2 CEKLKISHLACADDLVIFSRGDYLSVQVLCEVLKAFGGVSGLKVNPTKFNVFLASMDEEE 181
C I+HLA ADD++IF+ G+ S+ + L +F SGL +N K +FL ++ E
Sbjct: 140 CHSPVITHLAFADDIMIFTSGETRSLLEVKNTLDSFSRASGLYLNTEKTEIFLRGLNGTE 199
Query: 182 RNLITNSIGFFVGAMPFRYSGILLAGVYLKLADYAPLIDKVSKTLLAWQ----------- 328
+ + IGF G +P RY G+ L+ V L +DY PL+D+V + +W
Sbjct: 200 ASTLCAVIGFTRGYLPVRYLGVSLSPVRLTKSDYQPLLDRVKAKINSWTTRYLSYAGRLQ 259
Query: 329 ---DLIFHMSAA-----VLDRFIS-----LCCQFLWG-GNYARVAWKTM*LSREHXXXXX 466
+I+ M A +L +F + LC FLWG G RV+W T R+
Sbjct: 260 LVGTVIYGMVNAWGMIFMLPKFFTKQVDRLCAGFLWGAGTTHRVSWDTCCRPRKEGGLGL 319
Query: 467 XXXXXXMMLCSLKHYGMSLTKRTLYGVGGFIMSV*NQI--GLAGEKGFLILCQAHHLYQG 640
YG L L G + + + + +AG+ ++ L Q
Sbjct: 320 RKIAEFNQ-DPWTIYGSLLRYVGLTGPRSLRIPLPSSVSQAVAGDSWIFPGVRSDRLQQV 378
Query: 641 *DH*S-------*GFHSKCHWS-------PIFLASQ---VL*TLHLLMISLGPWNRGRFG 769
H S G W P F +S+ + T+H+ + PW+
Sbjct: 379 LAHISTIPPPSPDGPSDSALWKYKEEDFRPYFSSSRTWNLTRTVHV----IAPWS----S 430
Query: 770 IELFGILLTSQSFSFIFWFAVMG*FPTMDRL--FFL*VDQTCKLCNQMEETHLHLFFACP 943
I F + + +F + W ++ PT DRL + + D TC+LC+ +E+H HLFF C
Sbjct: 431 IVWFPLAIPRHAF--LHWQVMLFRLPTKDRLQQWGITSDATCRLCDGEDESHQHLFFGCT 488
Query: 944 FA----KRFGD 964
+A + FG+
Sbjct: 489 YASHLWRHFGE 499
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 88.2 bits (217), Expect(2) = 4e-18
Identities = 51/173 (29%), Positives = 80/173 (46%), Gaps = 29/173 (16%)
Frame = +2
Query: 2 CEKLKISHLACADDLVIFSRGDYLSVQVLCEVLKAFGGVSGLKVNPTKFNVFLASMDEEE 181
C+KL ++HL ADDL++F G SV+ + + K F G SGL ++ K ++LA + E
Sbjct: 266 CKKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKEFAGKSGLHISLEKSTLYLAGVSELN 325
Query: 182 RNLITNSIGFFVGAMPFRYSGILLAGVYLKLADYAPLIDKVSKTLLAWQD---------- 331
RN I ++ F G +P RY G+ L + ADY+PL+DKV + +W
Sbjct: 326 RNNILSAFPFASGQLPVRYLGLPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLA 385
Query: 332 --------------LIFHMSAAVLDRFISLCCQFLWGG-----NYARVAWKTM 433
+ + A + LC FLW G A++ W ++
Sbjct: 386 LINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSGPELNPKKAKITWTSL 438
Score = 31.2 bits (69), Expect(2) = 4e-18
Identities = 9/34 (26%), Positives = 19/34 (55%)
Frame = +1
Query: 454 GLGLRDIRSWNDALLTKTLWNVLDKKDTLWCRWI 555
GLG++ + N K +W ++ ++ +LW W+
Sbjct: 446 GLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWV 479
>gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thaliana]
Length = 504
Score = 77.8 bits (190), Expect(2) = 5e-18
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 29/170 (17%)
Frame = +2
Query: 2 CEKLKISHLACADDLVIFSRGDYLSVQVLCEVLKAFGGVSGLKVNPTKFNVFLASMDEEE 181
C+++ ++HL+ ADDL++ S G S++ + +V F S LK++ K V+LA +
Sbjct: 23 CKQIGLTHLSFADDLMVLSDGKVRSIEGIVDVFDTFAKCSDLKISMEKSTVYLAGLSHTT 82
Query: 182 RNLITNSIGFFVGAMPFRYSGILLAGVYLKLADYAPLIDKVSKTLLAWQ----------D 331
R + + F VG +P RY G+ L DY PLID + + + +W +
Sbjct: 83 RQEVIDRFSFAVGTLPVRYLGLPLVTKQFSSTDYLPLIDHIKQKICSWSARFLSYTGRLN 142
Query: 332 LI---------FHMSAAVLDR-----FISLCCQFLWGG-----NYARVAW 424
LI F M A L R +C +LW G + A++AW
Sbjct: 143 LISSILWSICNFWMGAFRLPRDCIREIDKMCSAYLWSGGELNTSKAKIAW 192
Score = 41.2 bits (95), Expect(2) = 5e-18
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 454 GLGLRDIRSWNDALLTKTLWNVLDKKDTLWCRWIHHVCVK 573
GLGLR ++ ND K +W ++ D+LW +WI +K
Sbjct: 203 GLGLRSLKEANDVCCLKLIWRIISHADSLWVKWIQSSLLK 242
>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1277
Score = 87.0 bits (214), Expect(2) = 8e-18
Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 29/173 (16%)
Frame = +2
Query: 2 CEKLKISHLACADDLVIFSRGDYLSVQVLCEVLKAFGGVSGLKVNPTKFNVFLASMDEEE 181
C+KL ++HL ADDL++F G SV+ + + K F G SGL ++ K ++LA + E
Sbjct: 835 CKKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKDFAGKSGLHISLEKSTLYLAEVSELN 894
Query: 182 RNLITNSIGFFVGAMPFRYSGILLAGVYLKLADYAPLIDKVSKTLLAWQD---------- 331
RN I ++ F G +P RY G L + ADY+PL+DKV + +W
Sbjct: 895 RNNILSAFPFASGQLPVRYLGFPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLA 954
Query: 332 --------------LIFHMSAAVLDRFISLCCQFLWGG-----NYARVAWKTM 433
+ + A + LC FLW G A++ W ++
Sbjct: 955 LINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSGPELNPKKAKITWTSL 1007
Score = 31.2 bits (69), Expect(2) = 8e-18
Identities = 9/34 (26%), Positives = 19/34 (55%)
Frame = +1
Query: 454 GLGLRDIRSWNDALLTKTLWNVLDKKDTLWCRWI 555
GLG++ + N K +W ++ ++ +LW W+
Sbjct: 1015 GLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWV 1048
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 76.3 bits (186), Expect(2) = 1e-17
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 29/173 (16%)
Frame = +2
Query: 2 CEKLKISHLACADDLVIFSRGDYLSVQVLCEVLKAFGGVSGLKVNPTKFNVFLASMDEEE 181
CE+L I+HL ADDL++F R D S+ + + F SGL + K N++ +D+E
Sbjct: 678 CERLNITHLMFADDLLMFCRADKSSLDHMNVAFQKFSHASGLAASHEKSNIYFCGVDDET 737
Query: 182 RNLITNSIGFFVGAMPFRYSGILLAGVYLKLADYAPLIDKVSKTLLAWQDL--------- 334
+ + + +G +PFRY G+ L L A PL++ ++ W
Sbjct: 738 ARELADYVHMQLGELPFRYLGVPLTSKKLTYAQCKPLVEMITNRAQTWMAKLLSYAGRLQ 797
Query: 335 ---------------IFHMSAAVLDRFISLCCQFLWGG-----NYARVAWKTM 433
IF +S V+ +C +FLW G A VAW T+
Sbjct: 798 LIKSILSSMQNYWAHIFPLSKKVIQAVEKVCRKFLWTGKTEETKKAPVAWATI 850
Score = 41.2 bits (95), Expect(2) = 1e-17
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 454 GLGLRDIRSWNDALLTKTLWNVLDKKDTLWCRWIHHVCVK 573
G + +++ WN A + K LW + K+D LW RWIH +K
Sbjct: 858 GWNVINMKYWNRAAMLKLLWAIEFKRDKLWVRWIHSYYIK 897
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 73.9 bits (180), Expect(2) = 5e-17
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 29/170 (17%)
Frame = +2
Query: 2 CEKLKISHLACADDLVIFSRGDYLSVQVLCEVLKAFGGVSGLKVNPTKFNVFLASMDEEE 181
C + ++HL ADD+++FS G S+Q + + F +S LK++ K +F+A +
Sbjct: 840 CRNMNLTHLCFADDIMVFSDGTSKSIQGTLAIFEKFAAMSWLKISLEKSTIFMAGISPNA 899
Query: 182 RNLITNSIGFFVGAMPFRYSGILLAGVYLKLADYAPLIDKVSKTLLAWQD---------- 331
+ I F +G +P +Y G+ L + +DY PL++K+ + +W +
Sbjct: 900 KTSILQQFPFELGTLPVKYLGLPLLTKRMTQSDYLPLVEKIRARITSWTNRFLSFAGRLQ 959
Query: 332 --------------LIFHMSAAVLDRFISLCCQFLWGG-----NYARVAW 424
+F + A L + FLW G A++AW
Sbjct: 960 LIKSVLSSITNFWLSVFRLPKACLQEIEKMFSAFLWSGPDLNTKKAKIAW 1009
Score = 41.6 bits (96), Expect(2) = 5e-17
Identities = 13/42 (30%), Positives = 27/42 (64%)
Frame = +1
Query: 454 GLGLRDIRSWNDALLTKTLWNVLDKKDTLWCRWIHHVCVKSD 579
GLGL+ ++ N+ L K +W +L +D+LW +W++ ++ +
Sbjct: 1020 GLGLKPLKEANEVSLLKLIWRILSARDSLWVKWVNKHLIRKE 1061
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 74.3 bits (181), Expect(2) = 7e-17
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 29/170 (17%)
Frame = +2
Query: 2 CEKLKISHLACADDLVIFSRGDYLSVQVLCEVLKAFGGVSGLKVNPTKFNVFLASMDEEE 181
C++L ++HL+ ADDL++ S G S++ + EV F SGL+++ K +++A +
Sbjct: 340 CQRLGLTHLSFADDLMVLSDGKTRSIEGILEVFDEFCKRSGLRISLEKSTLYMAGVSPII 399
Query: 182 RNLITNSIGFFVGAMPFRYSGILLAGVYLKLADYAPLIDKVSKTLLAWQ----------D 331
+ I F VG +P RY G+ L L ADY+PL++++ K + W +
Sbjct: 400 KQEIAAKFLFDVGQLPVRYLGLPLVTKRLTSADYSPLLEQIKKRIATWTFRFFSFAGRFN 459
Query: 332 LI--------------FHMSAAVLDRFISLCCQFLWGG-----NYARVAW 424
LI F + + LC FLW G + A+++W
Sbjct: 460 LIKSVLWSICNFWLAAFRLPRQCIREIDKLCSSFLWSGSEMSSHKAKISW 509
Score = 40.8 bits (94), Expect(2) = 7e-17
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +1
Query: 454 GLGLRDIRSWNDALLTKTLWNVLDKKDTLWCRWIHHVCV--KSDWTCRR 594
GLGLR+++ ND K +W ++ ++LW +W+ + KS W+ ++
Sbjct: 520 GLGLRNLKEANDVSCLKLVWRIISNSNSLWTKWVAEYLIRKKSIWSLKQ 568
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 83.2 bits (204), Expect(2) = 1e-16
Identities = 52/173 (30%), Positives = 83/173 (47%), Gaps = 29/173 (16%)
Frame = +2
Query: 2 CEKLKISHLACADDLVIFSRGDYLSVQVLCEVLKAFGGVSGLKVNPTKFNVFLASMDEEE 181
CEK+ ++HL ADDL++F G S++ + V K F G SGL+++ K ++LA + +
Sbjct: 990 CEKIGLTHLCFADDLMVFVDGHQWSIEGVINVFKEFAGRSGLQISLEKSTIYLAGVSASD 1049
Query: 182 RNLITNSIGFFVGAMPFRYSGILLAGVYLKLADYAPLIDKVSKTLLAW--QDLIFHMSAA 355
R +S F G +P RY G+ L + ADY+PLI+ V + +W + L + A
Sbjct: 1050 RVQTLSSFPFANGQLPVRYLGLPLLTKQMTTADYSPLIEAVKTKISSWTARSLSYAGRLA 1109
Query: 356 VLDRFI----------------------SLCCQFLWGG-----NYARVAWKTM 433
+L+ I LC FLW G A++AW ++
Sbjct: 1110 LLNSVIVSIANFWMSAYRLPAGCIREIEKLCSAFLWSGPVLNPKKAKIAWSSI 1162
Score = 31.2 bits (69), Expect(2) = 1e-16
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 454 GLGLRDIRSWNDALLTKTLWNVLDKKDTLWCRWI 555
GLG++ + N K +W +L + +LW WI
Sbjct: 1170 GLGIKSLAEANKVSCLKLIWRLLSTQPSLWVTWI 1203