BLASTX nr result
ID: Catharanthus22_contig00013959
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00013959
(993 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004240634.1| PREDICTED: pentatricopeptide repeat-containi... 202 2e-49
ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containi... 202 2e-49
ref|XP_006364563.1| PREDICTED: pentatricopeptide repeat-containi... 200 8e-49
ref|XP_004310156.1| PREDICTED: pentatricopeptide repeat-containi... 191 3e-46
gb|ESW31683.1| hypothetical protein PHAVU_002G258900g [Phaseolus... 185 2e-44
gb|EOY00680.1| Pentatricopeptide repeat superfamily protein isof... 185 2e-44
gb|EXB82495.1| hypothetical protein L484_027670 [Morus notabilis] 184 5e-44
ref|XP_003531325.2| PREDICTED: pentatricopeptide repeat-containi... 182 2e-43
ref|XP_002530052.1| pentatricopeptide repeat-containing protein,... 182 2e-43
gb|EMJ28460.1| hypothetical protein PRUPE_ppa017811mg [Prunus pe... 179 1e-42
ref|XP_006483972.1| PREDICTED: pentatricopeptide repeat-containi... 177 6e-42
ref|XP_006438222.1| hypothetical protein CICLE_v10031251mg [Citr... 177 6e-42
ref|XP_006417164.1| hypothetical protein EUTSA_v10007381mg [Eutr... 174 6e-41
ref|XP_004504137.1| PREDICTED: pentatricopeptide repeat-containi... 174 6e-41
ref|XP_002312667.1| pentatricopeptide repeat-containing family p... 169 2e-39
ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containi... 165 2e-38
ref|XP_002889980.1| pentatricopeptide repeat-containing protein ... 164 5e-38
ref|XP_006304861.1| hypothetical protein CARUB_v10012598mg [Caps... 162 2e-37
ref|NP_172763.1| pentatricopeptide repeat-containing protein [Ar... 161 3e-37
ref|XP_006836595.1| hypothetical protein AMTR_s00131p00098210 [A... 135 3e-29
>ref|XP_004240634.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Solanum lycopersicum]
Length = 511
Score = 202 bits (513), Expect = 2e-49
Identities = 94/131 (71%), Positives = 117/131 (89%)
Frame = -2
Query: 992 KMLLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISG 813
K L+DQM+ MGL PDRVL T++ID+LCKTG +G+A+S+F DM+EQG+APDV+ YNALISG
Sbjct: 379 KALVDQMTSMGLFPDRVLYTSIIDNLCKTGKLGVAESIFRDMVEQGVAPDVISYNALISG 438
Query: 812 FCRASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLD 633
FC+ASRV A+ L++DMQTRGL+PDE+TFK+IIGGLIQ K +++ACA+WDQMMEKGFTLD
Sbjct: 439 FCKASRVTEALSLYEDMQTRGLNPDEITFKLIIGGLIQGKNLSVACAIWDQMMEKGFTLD 498
Query: 632 CDLSNTLINAI 600
DLS TLINAI
Sbjct: 499 RDLSQTLINAI 509
Score = 71.2 bits (173), Expect = 6e-10
Identities = 38/127 (29%), Positives = 65/127 (51%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
LL+ M ++G+ P+ ++ LC + +A + M E+G PDVV Y +ISG C
Sbjct: 101 LLNDMDRVGIVPNFWAYNMYLNLLCSENLVDIALELIRVMGEKGREPDVVSYTIVISGLC 160
Query: 806 RASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCD 627
R R + A+ ++ M +GL PD K ++ GL K+ +A + ++ + +
Sbjct: 161 RIGRFDNAVEMWHTMIRKGLRPDNKACKALVFGLCGSGKVDLAYELTLGILRGQVKFNTE 220
Query: 626 LSNTLIN 606
+ NTLIN
Sbjct: 221 IYNTLIN 227
Score = 71.2 bits (173), Expect = 6e-10
Identities = 40/127 (31%), Positives = 66/127 (51%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
L+++M +GL PD L+ CK + A + D +E DVV YN +I C
Sbjct: 276 LIEKMEGIGLEPDGYSYNQLLRGFCKANRLDKAYKLMVDKMETKGLVDVVSYNTIIRALC 335
Query: 806 RASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCD 627
+ + + A LFK+M+ + + PD VTF ++I ++E ++A A+ DQM G D
Sbjct: 336 KTDQSKKAYILFKEMEQKKILPDVVTFTILIEASLKEGNSSVAKALVDQMTSMGLFPDRV 395
Query: 626 LSNTLIN 606
L ++I+
Sbjct: 396 LYTSIID 402
Score = 61.2 bits (147), Expect = 6e-07
Identities = 32/124 (25%), Positives = 60/124 (48%)
Frame = -2
Query: 980 DQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRA 801
++M +G + + + + I LCK + + + +DM GI P+ YN ++ C
Sbjct: 68 NEMKPVGFSLNSLTYSKFICGLCKVKNFDLISRLLNDMDRVGIVPNFWAYNMYLNLLCSE 127
Query: 800 SRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCDLS 621
+ V+ A+ L + M +G PD V++ ++I GL + + A +W M+ KG D
Sbjct: 128 NLVDIALELIRVMGEKGREPDVVSYTIVISGLCRIGRFDNAVEMWHTMIRKGLRPDNKAC 187
Query: 620 NTLI 609
L+
Sbjct: 188 KALV 191
Score = 61.2 bits (147), Expect = 6e-07
Identities = 34/120 (28%), Positives = 59/120 (49%)
Frame = -2
Query: 941 LLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRASRVEGAMHLFKDM 762
+ TLI+ C+ G I AQ++ M G PD+V YN ++ C +E AM L + M
Sbjct: 221 IYNTLINGFCRAGRIDKAQAIKTFMKRNGCEPDLVTYNVFLNYCCNELMLEEAMKLIEKM 280
Query: 761 QTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCDLSNTLINAIQSNEEA 582
+ GL PD ++ ++ G + ++ A + ME +D NT+I A+ +++
Sbjct: 281 EGIGLEPDGYSYNQLLRGFCKANRLDKAYKLMVDKMETKGLVDVVSYNTIIRALCKTDQS 340
Score = 59.3 bits (142), Expect = 2e-06
Identities = 36/122 (29%), Positives = 57/122 (46%)
Frame = -2
Query: 974 MSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRASR 795
M + GL PD L+ LC +G + +A + +L + + YN LI+GFCRA R
Sbjct: 175 MIRKGLRPDNKACKALVFGLCGSGKVDLAYELTLGILRGQVKFNTEIYNTLINGFCRAGR 234
Query: 794 VEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCDLSNT 615
++ A + M+ G PD VT+ V + E + A + ++M G D N
Sbjct: 235 IDKAQAIKTFMKRNGCEPDLVTYNVFLNYCCNELMLEEAMKLIEKMEGIGLEPDGYSYNQ 294
Query: 614 LI 609
L+
Sbjct: 295 LL 296
Score = 57.8 bits (138), Expect = 6e-06
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Frame = -2
Query: 974 MSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRASR 795
M + G PD V +++ C + A + M G+ PD YN L+ GFC+A+R
Sbjct: 245 MKRNGCEPDLVTYNVFLNYCCNELMLEEAMKLIEKMEGIGLEPDGYSYNQLLRGFCKANR 304
Query: 794 VEGAMHLFKD-MQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCDLSN 618
++ A L D M+T+GL D V++ II L + + A ++ +M +K D
Sbjct: 305 LDKAYKLMVDKMETKGL-VDVVSYNTIIRALCKTDQSKKAYILFKEMEQKKILPDVVTFT 363
Query: 617 TLINA 603
LI A
Sbjct: 364 ILIEA 368
>ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial [Vitis vinifera]
gi|296081374|emb|CBI16807.3| unnamed protein product
[Vitis vinifera]
Length = 519
Score = 202 bits (513), Expect = 2e-49
Identities = 97/141 (68%), Positives = 116/141 (82%)
Frame = -2
Query: 992 KMLLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISG 813
K LLDQM+ +GL PDRVL TT++DHLCKTG +GMA S+F DM+E GI PDVV YNALI+G
Sbjct: 379 KKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALING 438
Query: 812 FCRASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLD 633
CRASRV AMHL++DM T G PDEVTFK+IIGGLI EKK+++AC VWDQMMEKGFTLD
Sbjct: 439 LCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKGFTLD 498
Query: 632 CDLSNTLINAIQSNEEACIKI 570
+S TL+NAI SN+ +C+ I
Sbjct: 499 GAVSETLVNAIHSNDASCMNI 519
Score = 74.3 bits (181), Expect = 7e-11
Identities = 37/127 (29%), Positives = 66/127 (51%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
LL+ M ++G PD ++ LC + +A + M+E+G PD+V Y +I+G C
Sbjct: 101 LLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLC 160
Query: 806 RASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCD 627
RA R + A+ ++++M +G PDE + ++ GL + K+ +A + M
Sbjct: 161 RAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKS 220
Query: 626 LSNTLIN 606
+ N+LIN
Sbjct: 221 IYNSLIN 227
Score = 72.4 bits (176), Expect = 3e-10
Identities = 41/127 (32%), Positives = 64/127 (50%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
L+ +M + G+ PD L+ LCK + A M + +E DVV YN +I C
Sbjct: 276 LMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALC 335
Query: 806 RASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCD 627
AS + A LF++M +G+ PD VTF ++I ++E +A + DQM G D
Sbjct: 336 TASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRV 395
Query: 626 LSNTLIN 606
L T+++
Sbjct: 396 LYTTIVD 402
Score = 67.0 bits (162), Expect = 1e-08
Identities = 32/116 (27%), Positives = 59/116 (50%)
Frame = -2
Query: 980 DQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRA 801
D+M G + + + I LCK + + + + DM G PD+ YN ++ C
Sbjct: 68 DRMIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCE 127
Query: 800 SRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLD 633
++++ A+ + + M +G PD VT+ ++I GL + + A +W M+ KGF+ D
Sbjct: 128 NQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPD 183
Score = 62.8 bits (151), Expect = 2e-07
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 1/129 (0%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
++ M + G PD V L+++ C + A+++ M G+ PDV YN L+ G C
Sbjct: 241 IISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLC 300
Query: 806 RASRVEGA-MHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDC 630
+A+R++ A M + M+ +GL D V++ II L A ++++M KG T D
Sbjct: 301 KANRLDKAYMMMVNKMEAKGL-CDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDV 359
Query: 629 DLSNTLINA 603
LI A
Sbjct: 360 VTFTILIKA 368
Score = 61.2 bits (147), Expect = 6e-07
Identities = 35/114 (30%), Positives = 57/114 (50%)
Frame = -2
Query: 941 LLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRASRVEGAMHLFKDM 762
+ +LI+ C+ G I AQS+ M G PD+V YN L++ C +E A +L K M
Sbjct: 221 IYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKM 280
Query: 761 QTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCDLSNTLINAI 600
+ G+ PD ++ ++ GL + ++ A + ME D NT+I A+
Sbjct: 281 ERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKAL 334
>ref|XP_006364563.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X1 [Solanum tuberosum]
Length = 511
Score = 200 bits (508), Expect = 8e-49
Identities = 93/131 (70%), Positives = 116/131 (88%)
Frame = -2
Query: 992 KMLLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISG 813
K L+DQM+ MGL PDRVL T++ID+LCKTG +G+A+S+F DM+EQG+APDV+ YNALISG
Sbjct: 379 KALVDQMTSMGLFPDRVLYTSIIDNLCKTGKLGVAESIFRDMVEQGVAPDVISYNALISG 438
Query: 812 FCRASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLD 633
FC+ASRV A+ L++DMQ R L+PDE+TFK+IIGGLIQEK +++ACA+WDQMMEKGFTLD
Sbjct: 439 FCKASRVTEALSLYEDMQARDLNPDEITFKLIIGGLIQEKNLSVACAIWDQMMEKGFTLD 498
Query: 632 CDLSNTLINAI 600
DLS TLINAI
Sbjct: 499 RDLSQTLINAI 509
Score = 70.1 bits (170), Expect = 1e-09
Identities = 37/127 (29%), Positives = 65/127 (51%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
LL+ M ++G+ P+ ++ LC + +A + M E+G PDVV Y +ISG C
Sbjct: 101 LLNDMDRVGIVPNFWAYNMYLNLLCSENLVDIALELIRVMGEKGREPDVVSYTIVISGLC 160
Query: 806 RASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCD 627
R R + A+ ++ M +GL PD K ++ GL ++ +A + ++ + +
Sbjct: 161 RIGRFDNAVEMWHTMIRKGLRPDNKACKALVFGLCGSGRVDLAYELTLGILRGQVKFNTE 220
Query: 626 LSNTLIN 606
+ NTLIN
Sbjct: 221 IYNTLIN 227
Score = 69.7 bits (169), Expect = 2e-09
Identities = 39/127 (30%), Positives = 65/127 (51%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
L+++M GL PD L+ CK + A + D +E DVV YN +I C
Sbjct: 276 LIEKMEGNGLEPDGYSYNQLLRGFCKANRLDKAYKLMVDKMETKGLVDVVSYNTIIRALC 335
Query: 806 RASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCD 627
+ + A +LF++M+ + + PD VTF ++I ++E ++A A+ DQM G D
Sbjct: 336 KTDHSKKAYNLFEEMEQKKIVPDVVTFTILIEASLKEGNSSVAKALVDQMTSMGLFPDRV 395
Query: 626 LSNTLIN 606
L ++I+
Sbjct: 396 LYTSIID 402
Score = 61.2 bits (147), Expect = 6e-07
Identities = 32/124 (25%), Positives = 60/124 (48%)
Frame = -2
Query: 980 DQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRA 801
++M +G + + + + I LCK + + + +DM GI P+ YN ++ C
Sbjct: 68 NEMKPVGFSLNSLTYSKFICGLCKVKNFDLISRLLNDMDRVGIVPNFWAYNMYLNLLCSE 127
Query: 800 SRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCDLS 621
+ V+ A+ L + M +G PD V++ ++I GL + + A +W M+ KG D
Sbjct: 128 NLVDIALELIRVMGEKGREPDVVSYTIVISGLCRIGRFDNAVEMWHTMIRKGLRPDNKAC 187
Query: 620 NTLI 609
L+
Sbjct: 188 KALV 191
Score = 60.1 bits (144), Expect = 1e-06
Identities = 36/122 (29%), Positives = 57/122 (46%)
Frame = -2
Query: 974 MSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRASR 795
M + GL PD L+ LC +G + +A + +L + + YN LI+GFCRA R
Sbjct: 175 MIRKGLRPDNKACKALVFGLCGSGRVDLAYELTLGILRGQVKFNTEIYNTLINGFCRAGR 234
Query: 794 VEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCDLSNT 615
++ A + M+ G PD VT+ V + E + A + ++M G D N
Sbjct: 235 IDKAQAIKTFMRRNGCEPDLVTYNVFLNYCCNELMLEEAVKLIEKMEGNGLEPDGYSYNQ 294
Query: 614 LI 609
L+
Sbjct: 295 LL 296
Score = 60.1 bits (144), Expect = 1e-06
Identities = 33/114 (28%), Positives = 56/114 (49%)
Frame = -2
Query: 941 LLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRASRVEGAMHLFKDM 762
+ TLI+ C+ G I AQ++ M G PD+V YN ++ C +E A+ L + M
Sbjct: 221 IYNTLINGFCRAGRIDKAQAIKTFMRRNGCEPDLVTYNVFLNYCCNELMLEEAVKLIEKM 280
Query: 761 QTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCDLSNTLINAI 600
+ GL PD ++ ++ G + ++ A + ME +D NT+I A+
Sbjct: 281 EGNGLEPDGYSYNQLLRGFCKANRLDKAYKLMVDKMETKGLVDVVSYNTIIRAL 334
Score = 58.2 bits (139), Expect = 5e-06
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Frame = -2
Query: 974 MSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRASR 795
M + G PD V +++ C + A + M G+ PD YN L+ GFC+A+R
Sbjct: 245 MRRNGCEPDLVTYNVFLNYCCNELMLEEAVKLIEKMEGNGLEPDGYSYNQLLRGFCKANR 304
Query: 794 VEGAMHLFKD-MQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCDLSN 618
++ A L D M+T+GL D V++ II L + A ++++M +K D
Sbjct: 305 LDKAYKLMVDKMETKGL-VDVVSYNTIIRALCKTDHSKKAYNLFEEMEQKKIVPDVVTFT 363
Query: 617 TLINA 603
LI A
Sbjct: 364 ILIEA 368
>ref|XP_004310156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 516
Score = 191 bits (486), Expect = 3e-46
Identities = 92/137 (67%), Positives = 112/137 (81%)
Frame = -2
Query: 992 KMLLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISG 813
K LLDQM+ M L PDR+ TT+IDHLCK+G I MA MF+DMLE+GI DVV YNALISG
Sbjct: 380 KKLLDQMTGMDLLPDRIFYTTIIDHLCKSGKIAMACDMFNDMLEKGITADVVLYNALISG 439
Query: 812 FCRASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLD 633
CRASRV AMHL+++MQTRG PDEVT+KV+IGGLI++K++++AC VWD+MMEKGFTLD
Sbjct: 440 LCRASRVTEAMHLYEEMQTRGCFPDEVTYKVVIGGLIKDKRLSVACGVWDEMMEKGFTLD 499
Query: 632 CDLSNTLINAIQSNEEA 582
LS TLINA+ S + A
Sbjct: 500 RVLSETLINAVHSKDLA 516
Score = 67.4 bits (163), Expect = 8e-09
Identities = 45/164 (27%), Positives = 70/164 (42%), Gaps = 35/164 (21%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
L+ QM K+G+ D + LCK A +M+E +VV +N +I C
Sbjct: 277 LMRQMEKIGMKLDAYSYNGFLKGLCKDNRPEKAYLFMKNMMEPKGLCNVVSFNTIIMACC 336
Query: 806 RASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQE----------------------- 696
+ + A LF++M +G+ PD VTF ++IG ++E
Sbjct: 337 KGGQTRRAYKLFQEMFQKGILPDVVTFTILIGAFLREGSSDVAKKLLDQMTGMDLLPDRI 396
Query: 695 ------------KKITMACAVWDQMMEKGFTLDCDLSNTLINAI 600
KI MAC +++ M+EKG T D L N LI+ +
Sbjct: 397 FYTTIIDHLCKSGKIAMACDMFNDMLEKGITADVVLYNALISGL 440
Score = 66.2 bits (160), Expect = 2e-08
Identities = 37/127 (29%), Positives = 63/127 (49%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
LL M ++G PD ++ LC+ I A +F M ++G PDVV Y +I G C
Sbjct: 102 LLRDMDRLGSVPDIWAFNIYLNLLCQENRIHYALEVFDRMADKGREPDVVSYTIVIHGLC 161
Query: 806 RASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCD 627
+A R + A+ ++ M ++G PD + ++ GL K+ +A + M+ G +
Sbjct: 162 KAGRFDNAVEIWNGMISKGFRPDTIACTALVVGLCGGGKVDLAYDLVIGEMKGGVEFNNL 221
Query: 626 LSNTLIN 606
+ N LI+
Sbjct: 222 IYNALIS 228
Score = 65.9 bits (159), Expect = 2e-08
Identities = 31/123 (25%), Positives = 59/123 (47%)
Frame = -2
Query: 977 QMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRAS 798
+M+ G + + I LC + + + + DM G PD+ +N ++ C+ +
Sbjct: 70 EMAPQGFSLTPFTYSRFISGLCNVNNFTLIEKLLRDMDRLGSVPDIWAFNIYLNLLCQEN 129
Query: 797 RVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCDLSN 618
R+ A+ +F M +G PD V++ ++I GL + + A +W+ M+ KGF D
Sbjct: 130 RIHYALEVFDRMADKGREPDVVSYTIVIHGLCKAGRFDNAVEIWNGMISKGFRPDTIACT 189
Query: 617 TLI 609
L+
Sbjct: 190 ALV 192
Score = 65.5 bits (158), Expect = 3e-08
Identities = 39/125 (31%), Positives = 60/125 (48%)
Frame = -2
Query: 974 MSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRASR 795
M G PD + T L+ LC G + +A + ++ G+ + + YNALISGFCRA R
Sbjct: 176 MISKGFRPDTIACTALVVGLCGGGKVDLAYDLVIGEMKGGVEFNNLIYNALISGFCRARR 235
Query: 794 VEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCDLSNT 615
++ A + M+ G PD VT V++ E + A + QM + G LD N
Sbjct: 236 IDKAQAIKLFMKRNGCKPDLVTHNVLLNYCCNEFMLEEAEKLMRQMEKIGMKLDAYSYNG 295
Query: 614 LINAI 600
+ +
Sbjct: 296 FLKGL 300
>gb|ESW31683.1| hypothetical protein PHAVU_002G258900g [Phaseolus vulgaris]
Length = 518
Score = 185 bits (470), Expect = 2e-44
Identities = 83/137 (60%), Positives = 110/137 (80%)
Frame = -2
Query: 992 KMLLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISG 813
K LLD+M+++G+ PDR+ T ++DHLCKTG + A S+F DM+E G+ PDV+ YNAL++G
Sbjct: 382 KKLLDEMTRLGILPDRIFYTAVVDHLCKTGKVDTADSVFRDMVENGVNPDVISYNALVNG 441
Query: 812 FCRASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLD 633
FC+ASRV AM L+ +MQ GL+PDEVTFK+I+GGLI+ KK+++AC VWDQMMEKG TLD
Sbjct: 442 FCKASRVMDAMRLYDEMQRNGLYPDEVTFKLIVGGLIRGKKLSLACRVWDQMMEKGLTLD 501
Query: 632 CDLSNTLINAIQSNEEA 582
LS TL+NAIQS + A
Sbjct: 502 KHLSETLVNAIQSRDGA 518
Score = 69.7 bits (169), Expect = 2e-09
Identities = 36/118 (30%), Positives = 58/118 (49%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
L++ M + G+ PD L+ CK + A M + ++ DVV YN LI+ FC
Sbjct: 279 LVETMERSGVEPDFYSYNELLKCFCKANMVDRAYLMLVERMQTKGMCDVVSYNTLITAFC 338
Query: 806 RASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLD 633
+ R LF++M +G+ PD VTF ++I ++E I + + D+M G D
Sbjct: 339 KVRRTRRGYELFEEMCGKGIRPDMVTFNILIDAFLREGSIQVVKKLLDEMTRLGILPD 396
Score = 66.2 bits (160), Expect = 2e-08
Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
Frame = -2
Query: 974 MSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRASR 795
MS+ G PD V TL+++ C G + A + M G+ PD YN L+ FC+A+
Sbjct: 248 MSRNGCVPDLVTYNTLLNYCCDEGMLDEALRLVETMERSGVEPDFYSYNELLKCFCKANM 307
Query: 794 VEGA-MHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCDLSN 618
V+ A + L + MQT+G+ D V++ +I + ++ ++++M KG D N
Sbjct: 308 VDRAYLMLVERMQTKGM-CDVVSYNTLITAFCKVRRTRRGYELFEEMCGKGIRPDMVTFN 366
Query: 617 TLINA 603
LI+A
Sbjct: 367 ILIDA 371
Score = 63.2 bits (152), Expect = 2e-07
Identities = 34/127 (26%), Positives = 62/127 (48%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
LL M +G PD T + LC+ + A +FH M +G PDVV Y ++ C
Sbjct: 104 LLLDMHALGFVPDIWAFNTYLSFLCRHNRLETALELFHSMPSEGREPDVVSYTIIVDALC 163
Query: 806 RASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCD 627
+A R + A +++ + +GL PD ++ GL ++ +A + +++ G ++
Sbjct: 164 KAQRYDEAARVWRGLTGKGLSPDFKACVALVVGLCGGGRVDLAYELVVGVIKGGVKVNIL 223
Query: 626 LSNTLIN 606
+ N LI+
Sbjct: 224 VYNALID 230
Score = 63.2 bits (152), Expect = 2e-07
Identities = 36/118 (30%), Positives = 57/118 (48%)
Frame = -2
Query: 962 GLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRASRVEGA 783
GL+PD L+ LC G + +A + +++ G+ +++ YNALI GFCR RV+ A
Sbjct: 182 GLSPDFKACVALVVGLCGGGRVDLAYELVVGVIKGGVKVNILVYNALIDGFCRMGRVDKA 241
Query: 782 MHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCDLSNTLI 609
M + M G PD VT+ ++ E + A + + M G D N L+
Sbjct: 242 MKIKAFMSRNGCVPDLVTYNTLLNYCCDEGMLDEALRLVETMERSGVEPDFYSYNELL 299
Score = 59.3 bits (142), Expect = 2e-06
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Frame = -2
Query: 926 IDHLCKT-GSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRASRVEGAMHLFKDMQTRG 750
I LC ++ + + DM G PD+ +N +S CR +R+E A+ LF M + G
Sbjct: 88 ISALCSAPNNLPLIHDLLLDMHALGFVPDIWAFNTYLSFLCRHNRLETALELFHSMPSEG 147
Query: 749 LHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLD 633
PD V++ +I+ L + ++ A VW + KG + D
Sbjct: 148 REPDVVSYTIIVDALCKAQRYDEAARVWRGLTGKGLSPD 186
>gb|EOY00680.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
cacao] gi|508708784|gb|EOY00681.1| Pentatricopeptide
repeat superfamily protein isoform 1 [Theobroma cacao]
gi|508708785|gb|EOY00682.1| Pentatricopeptide repeat
superfamily protein isoform 1 [Theobroma cacao]
gi|508708786|gb|EOY00683.1| Pentatricopeptide repeat
superfamily protein isoform 1 [Theobroma cacao]
Length = 516
Score = 185 bits (470), Expect = 2e-44
Identities = 87/133 (65%), Positives = 108/133 (81%)
Frame = -2
Query: 992 KMLLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISG 813
K LLD+MS MGL PD + T +IDHLCK G + MA S+F DM++QG+ PDVV YNALI+G
Sbjct: 380 KALLDRMSGMGLLPDCIFYTAIIDHLCKNGKVEMAHSVFDDMIKQGVNPDVVSYNALING 439
Query: 812 FCRASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLD 633
FC+++R A+HL+++MQTRG PDEVTFK+IIGGLI+EKK++ AC VWDQMMEKGFTLD
Sbjct: 440 FCKSNRASEAIHLYEEMQTRGFSPDEVTFKLIIGGLIREKKLSKACKVWDQMMEKGFTLD 499
Query: 632 CDLSNTLINAIQS 594
+S TLINAI S
Sbjct: 500 GAVSETLINAIHS 512
Score = 73.2 bits (178), Expect = 1e-10
Identities = 38/133 (28%), Positives = 71/133 (53%)
Frame = -2
Query: 992 KMLLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISG 813
++LL+ M K+ PD ++ LC+ I +A +FH ++++G PDVV Y +I G
Sbjct: 99 ELLLNDMDKLNYVPDIWAFNIYLNLLCREKKIELALEVFHSLVKKGRDPDVVTYTIMIDG 158
Query: 812 FCRASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLD 633
C+A + + A+ +++M +G PD ++ GL K+ +A + ++++ G D
Sbjct: 159 LCKAGKFDNAVGFWREMVGKGFRPDNKACCALVVGLCDGGKVDLAYELVVEVIKGG---D 215
Query: 632 CDLSNTLINAIQS 594
+ S L NA+ S
Sbjct: 216 IEFSTLLYNALIS 228
Score = 64.3 bits (155), Expect = 7e-08
Identities = 44/163 (26%), Positives = 66/163 (40%), Gaps = 35/163 (21%)
Frame = -2
Query: 974 MSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRASR 795
M+K G PD V L+++ C + A + M GI PDV YN +I GFC A+R
Sbjct: 246 MTKNGCEPDLVTYNVLLNYCCNELMLEEAAKLVKKMERSGIGPDVYGYNQMIKGFCNANR 305
Query: 794 VEGAM-----------------------------------HLFKDMQTRGLHPDEVTFKV 720
+ A+ LF++M +G+ PD VTF
Sbjct: 306 PDKALLLMVNKMEANGLADAVSHNTIIKAFCKGGHIGKAYKLFEEMGRKGIAPDVVTFTT 365
Query: 719 IIGGLIQEKKITMACAVWDQMMEKGFTLDCDLSNTLINAIQSN 591
+I + E +A A+ D+M G DC +I+ + N
Sbjct: 366 LIKACLTEGSSDIAKALLDRMSGMGLLPDCIFYTAIIDHLCKN 408
Score = 63.5 bits (153), Expect = 1e-07
Identities = 32/115 (27%), Positives = 55/115 (47%)
Frame = -2
Query: 977 QMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRAS 798
QM G + + I LC + + + +DM + PD+ +N ++ CR
Sbjct: 69 QMFPQGFSLTPFTYSRFISALCPVKNFNFIELLLNDMDKLNYVPDIWAFNIYLNLLCREK 128
Query: 797 RVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLD 633
++E A+ +F + +G PD VT+ ++I GL + K A W +M+ KGF D
Sbjct: 129 KIELALEVFHSLVKKGRDPDVVTYTIMIDGLCKAGKFDNAVGFWREMVGKGFRPD 183
>gb|EXB82495.1| hypothetical protein L484_027670 [Morus notabilis]
Length = 513
Score = 184 bits (467), Expect = 5e-44
Identities = 87/135 (64%), Positives = 108/135 (80%)
Frame = -2
Query: 992 KMLLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISG 813
K LLDQM+ MGL PD + T ++DHLCK G IGMA S+F DM+E+GI PDV+ YNA+I+G
Sbjct: 379 KRLLDQMTGMGLLPDCLFYTIIVDHLCKAGKIGMAHSVFSDMVERGITPDVISYNAIING 438
Query: 812 FCRASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLD 633
C+A RV A+HL+++MQ RGL PDEVTFK+IIGGLI+E K+ +AC VWDQMMEKGFTL+
Sbjct: 439 LCKAFRVSEAVHLYEEMQARGLCPDEVTFKLIIGGLIKENKLPLACRVWDQMMEKGFTLE 498
Query: 632 CDLSNTLINAIQSNE 588
LS TLINAI S +
Sbjct: 499 PALSETLINAINSKD 513
Score = 72.8 bits (177), Expect = 2e-10
Identities = 38/119 (31%), Positives = 60/119 (50%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
L++ M ++G+ PD L+ LC+ A + D +E +VV YN +I FC
Sbjct: 276 LINTMERIGMKPDSYSYNKLLKGLCRAHRPDKAYLLMVDSMESKGLANVVSYNTIIGAFC 335
Query: 806 RASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDC 630
+ RV A LF++M+ +G+ PD VTF ++I + +A + DQM G DC
Sbjct: 336 KLLRVRRAYQLFEEMRQKGIEPDVVTFTILIKAFLSVGSSDVAKRLLDQMTGMGLLPDC 394
Score = 65.5 bits (158), Expect = 3e-08
Identities = 35/123 (28%), Positives = 59/123 (47%)
Frame = -2
Query: 977 QMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRAS 798
+M+ G + + I LC + + + + DM + G PD+ +N ++ C
Sbjct: 69 KMAPQGFSLYPFTYSRFISALCAVKNFLLVEKLLEDMDKLGCIPDIWAFNIYLNVLCGEH 128
Query: 797 RVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCDLSN 618
RV+ A+ +F+ M RG PD VT+ ++I GL + K A W M++KGF D
Sbjct: 129 RVQLALEVFRRMVERGREPDVVTYTILIDGLCKAWKFDAAVEAWCGMIKKGFVPDTIACT 188
Query: 617 TLI 609
L+
Sbjct: 189 ALV 191
Score = 65.1 bits (157), Expect = 4e-08
Identities = 33/103 (32%), Positives = 54/103 (52%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
LL+ M K+G PD ++ LC + +A +F M+E+G PDVV Y LI G C
Sbjct: 101 LLEDMDKLGCIPDIWAFNIYLNVLCGEHRVQLALEVFRRMVERGREPDVVTYTILIDGLC 160
Query: 806 RASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMA 678
+A + + A+ + M +G PD + ++ GL + K+ +A
Sbjct: 161 KAWKFDAAVEAWCGMIKKGFVPDTIACTALVVGLCEGGKVDLA 203
Score = 62.0 bits (149), Expect = 3e-07
Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
Frame = -2
Query: 992 KMLLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISG 813
+++ D M + G PD V L+ + C + A + + M G+ PD YN L+ G
Sbjct: 239 QVIKDFMKRDGCEPDLVTYNVLLIYCCDKLMLDEANKLINTMERIGMKPDSYSYNKLLKG 298
Query: 812 FCRASRVEGAMHLFKD-MQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTL 636
CRA R + A L D M+++GL + V++ IIG + ++ A ++++M +KG
Sbjct: 299 LCRAHRPDKAYLLMVDSMESKGL-ANVVSYNTIIGAFCKLLRVRRAYQLFEEMRQKGIEP 357
Query: 635 DCDLSNTLINAIQS 594
D LI A S
Sbjct: 358 DVVTFTILIKAFLS 371
Score = 61.6 bits (148), Expect = 4e-07
Identities = 31/87 (35%), Positives = 49/87 (56%)
Frame = -2
Query: 974 MSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRASR 795
M K G PD + T L+ LC+ G + +A + L+ + + + YN+LISGFCRA R
Sbjct: 175 MIKKGFVPDTIACTALVVGLCEGGKVDLAYELTVGALKGRVKFNNLIYNSLISGFCRAGR 234
Query: 794 VEGAMHLFKDMQTRGLHPDEVTFKVII 714
++ A + M+ G PD VT+ V++
Sbjct: 235 IDKAQVIKDFMKRDGCEPDLVTYNVLL 261
>ref|XP_003531325.2| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X1 [Glycine max]
gi|571471241|ref|XP_006585252.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X2 [Glycine max]
Length = 521
Score = 182 bits (462), Expect = 2e-43
Identities = 81/135 (60%), Positives = 111/135 (82%)
Frame = -2
Query: 992 KMLLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISG 813
K LLD+M+KM + PD + T ++DHLCK G + +A S+F DM+E G+ PDV+ YNAL++G
Sbjct: 384 KKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNG 443
Query: 812 FCRASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLD 633
FC+ SRV AMHLF +MQ++GL+PDEVT+K+I+GGLI+ KKI++AC VWDQMME+GFTL+
Sbjct: 444 FCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLN 503
Query: 632 CDLSNTLINAIQSNE 588
LS TL+NAIQS++
Sbjct: 504 RHLSETLVNAIQSSD 518
Score = 70.9 bits (172), Expect = 7e-10
Identities = 36/132 (27%), Positives = 64/132 (48%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
L++ M + G+ PD L+ CK + A M + ++ DVV YN +I+ FC
Sbjct: 281 LVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFC 340
Query: 806 RASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCD 627
+A R LF++M +G+ PD VTF ++I ++E + + D+M + DC
Sbjct: 341 KARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCI 400
Query: 626 LSNTLINAIQSN 591
+++ + N
Sbjct: 401 FYTAVVDHLCKN 412
Score = 69.7 bits (169), Expect = 2e-09
Identities = 38/125 (30%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
Frame = -2
Query: 974 MSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRASR 795
MS+ G PD V L+++ C+ G + A + M G+ PD+ YN L+ GFC+A+
Sbjct: 250 MSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANM 309
Query: 794 VEGA-MHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCDLSN 618
V+ A + + + MQT+G+ D V++ +I + ++ ++++M KG D N
Sbjct: 310 VDRAHLMMVERMQTKGM-CDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFN 368
Query: 617 TLINA 603
LI+A
Sbjct: 369 ILIDA 373
Score = 64.7 bits (156), Expect = 5e-08
Identities = 36/118 (30%), Positives = 58/118 (49%)
Frame = -2
Query: 962 GLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRASRVEGA 783
GL+PD L+ LC G + +A + +++ G+ + + YNALI GFCR RV+ A
Sbjct: 184 GLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKA 243
Query: 782 MHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCDLSNTLI 609
M + M G PD VT+ +++ +E + A + + M G D N L+
Sbjct: 244 MKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELL 301
Score = 64.3 bits (155), Expect = 7e-08
Identities = 29/90 (32%), Positives = 51/90 (56%)
Frame = -2
Query: 902 SIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRASRVEGAMHLFKDMQTRGLHPDEVTFK 723
++ + S+ DM G PD+ +N ++ CR +R+E A+ LF M ++G PD V++
Sbjct: 99 NLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYT 158
Query: 722 VIIGGLIQEKKITMACAVWDQMMEKGFTLD 633
+II L K+ A VW ++++KG + D
Sbjct: 159 IIIDALCNAKRFDEAAKVWRRLIDKGLSPD 188
Score = 62.8 bits (151), Expect = 2e-07
Identities = 35/127 (27%), Positives = 62/127 (48%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
LL M +G PD T ++ LC+ + A +FH M +G PDVV Y +I C
Sbjct: 106 LLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALC 165
Query: 806 RASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCD 627
A R + A +++ + +GL PD ++ GL ++ +A + +++ G ++
Sbjct: 166 NAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSL 225
Query: 626 LSNTLIN 606
+ N LI+
Sbjct: 226 VYNALID 232
>ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530468|gb|EEF32352.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 554
Score = 182 bits (461), Expect = 2e-43
Identities = 85/135 (62%), Positives = 114/135 (84%), Gaps = 2/135 (1%)
Frame = -2
Query: 992 KMLLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISG 813
K LLDQM++MGL+PD + TT+IDHLCK+G + MA S+F DM+EQGI+PDV+ +NALI+G
Sbjct: 380 KKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALING 439
Query: 812 FCRASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLD 633
FC+ SRV AMHL+++MQ RG +PDEVT+K+IIGGLI+EKKI++AC VW QMM+KGFTLD
Sbjct: 440 FCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLD 499
Query: 632 CDLSNTLI--NAIQS 594
++ TLI N+I++
Sbjct: 500 RAIAQTLIRGNSIEN 514
Score = 61.2 bits (147), Expect = 6e-07
Identities = 33/115 (28%), Positives = 52/115 (45%)
Frame = -2
Query: 977 QMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRAS 798
QM G + + I LCK + + HDM PD+ +N +
Sbjct: 69 QMGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEG 128
Query: 797 RVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLD 633
R++ A+ +F+ + G PD VT+ +II G+ + KK A W M+ KGF+ D
Sbjct: 129 RIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPD 183
Score = 60.5 bits (145), Expect = 1e-06
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 1/126 (0%)
Frame = -2
Query: 974 MSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQG-IAPDVVCYNALISGFCRAS 798
M G +PD ++ LC + +A + D+++ G + + YNALISGFCRA
Sbjct: 175 MIHKGFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAG 234
Query: 797 RVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCDLSN 618
R++ A + M+ G PD VT+ V + E + A + M G D N
Sbjct: 235 RIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYN 294
Query: 617 TLINAI 600
L+ I
Sbjct: 295 QLLKGI 300
Score = 59.7 bits (143), Expect = 2e-06
Identities = 37/131 (28%), Positives = 61/131 (46%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
LL M + PD + L G I +A +F +++ G PDVV Y +I G C
Sbjct: 101 LLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVC 160
Query: 806 RASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCD 627
+ + + A+ ++DM +G PD I+ GL +K+ +A + +M+ G
Sbjct: 161 KIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSG---RVK 217
Query: 626 LSNTLINAIQS 594
LS + NA+ S
Sbjct: 218 LSTLVYNALIS 228
>gb|EMJ28460.1| hypothetical protein PRUPE_ppa017811mg [Prunus persica]
Length = 541
Score = 179 bits (454), Expect = 1e-42
Identities = 84/129 (65%), Positives = 105/129 (81%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
LLDQM+ MGL PDR+ TT++DHLCK+G I MA S+F DMLE+GIAPD V +NALI+G C
Sbjct: 381 LLDQMTVMGLLPDRIFYTTIVDHLCKSGKIAMAYSVFSDMLEKGIAPDAVSFNALINGLC 440
Query: 806 RASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCD 627
+ASRV AMHL+++MQ RG PDEVTFK+IIGGLI+E K+++AC VWDQMMEKGFTLD
Sbjct: 441 KASRVSEAMHLYEEMQNRGCCPDEVTFKLIIGGLIRENKLSVACRVWDQMMEKGFTLDGA 500
Query: 626 LSNTLINAI 600
+S L+ +
Sbjct: 501 VSERLMKLL 509
Score = 68.6 bits (166), Expect = 4e-09
Identities = 39/127 (30%), Positives = 62/127 (48%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
L+ +M + G+ PD L+ LC+ A + +E +VV YN +I+ FC
Sbjct: 276 LMKKMERSGMEPDVYSYNQLLKGLCQANRADKAYLLMRTRMEPKGLCNVVSYNTIITAFC 335
Query: 806 RASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCD 627
RA R A LF++M +G PD VTF ++I ++E +A + DQM G D
Sbjct: 336 RAHRTGRAYKLFEEMGQKGTMPDVVTFTILIEAFLREGSSDIANKLLDQMTVMGLLPDRI 395
Query: 626 LSNTLIN 606
T+++
Sbjct: 396 FYTTIVD 402
Score = 67.4 bits (163), Expect = 8e-09
Identities = 37/127 (29%), Positives = 62/127 (48%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
L+ M ++G PD ++ LC+ A +FH M+++G PDVV Y LI G C
Sbjct: 101 LIRDMDRLGAVPDIWAFNIYLNLLCQENRAHFALEVFHRMVDKGREPDVVSYTILIDGLC 160
Query: 806 RASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCD 627
+A + + A+ ++ M +G PD + ++ GL K+ +A + M+
Sbjct: 161 KARQFDKAVDIWTSMIRKGFKPDNIACTALVVGLCDGGKVDLAYNLVIGEMKGQVKFSNL 220
Query: 626 LSNTLIN 606
+ NTLIN
Sbjct: 221 MYNTLIN 227
Score = 65.9 bits (159), Expect = 2e-08
Identities = 31/115 (26%), Positives = 56/115 (48%)
Frame = -2
Query: 977 QMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRAS 798
+M G + + I LCK + + + + DM G PD+ +N ++ C+ +
Sbjct: 69 EMVPQGFSLSAFTYSRFISGLCKIRNFTLIEKLIRDMDRLGAVPDIWAFNIYLNLLCQEN 128
Query: 797 RVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLD 633
R A+ +F M +G PD V++ ++I GL + ++ A +W M+ KGF D
Sbjct: 129 RAHFALEVFHRMVDKGREPDVVSYTILIDGLCKARQFDKAVDIWTSMIRKGFKPD 183
Score = 57.4 bits (137), Expect = 8e-06
Identities = 34/125 (27%), Positives = 57/125 (45%)
Frame = -2
Query: 974 MSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRASR 795
M + G PD + T L+ LC G + +A ++ ++ + + YN LI+GFCRA R
Sbjct: 175 MIRKGFKPDNIACTALVVGLCDGGKVDLAYNLVIGEMKGQVKFSNLMYNTLINGFCRAGR 234
Query: 794 VEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCDLSNT 615
++ A + M+ G D VT V++ E + A + +M G D N
Sbjct: 235 IDKAQAIKSFMKRNGCESDLVTHNVLLKYCCNEFMLEEAEKLMKKMERSGMEPDVYSYNQ 294
Query: 614 LINAI 600
L+ +
Sbjct: 295 LLKGL 299
>ref|XP_006483972.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X1 [Citrus sinensis]
gi|568860947|ref|XP_006483973.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X2 [Citrus sinensis]
Length = 517
Score = 177 bits (449), Expect = 6e-42
Identities = 84/135 (62%), Positives = 106/135 (78%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
LL+QM M L+PDR+L TT+ID LCK+ IG A +F DM+EQGI PDV+ YNALI+G C
Sbjct: 381 LLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLC 440
Query: 806 RASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCD 627
++SRV AMHL+++MQ RG HPDEVTFK++IGGL+QEKK+ +AC +WDQMMEKGFTLD
Sbjct: 441 KSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKT 500
Query: 626 LSNTLINAIQSNEEA 582
+S LI AI + A
Sbjct: 501 VSAALIEAIHLQDAA 515
Score = 65.5 bits (158), Expect = 3e-08
Identities = 38/134 (28%), Positives = 63/134 (47%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
L+ +M G+ PD L+ LC + + A +E D V YN +I FC
Sbjct: 276 LVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFC 335
Query: 806 RASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCD 627
+ + A LF++M+ RG+ D VTF ++I ++E MA + +QM + D
Sbjct: 336 KGGQTRRAYKLFEEMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRI 395
Query: 626 LSNTLINAIQSNEE 585
L T+I+ + + E
Sbjct: 396 LYTTIIDCLCKSRE 409
Score = 64.7 bits (156), Expect = 5e-08
Identities = 37/137 (27%), Positives = 62/137 (45%)
Frame = -2
Query: 989 MLLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGF 810
+LLD M K+G PD ++ L I +A +FH M+ +G PD V Y +I G
Sbjct: 100 ILLDNMDKLGYLPDIWAFNIYLNLLFHENRIDLALEVFHKMVSKGREPDFVTYTIVIDGL 159
Query: 809 CRASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDC 630
C+A + + A+ ++ M G+ PD ++ GL + K+ +A + M+
Sbjct: 160 CKAKKFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGV 219
Query: 629 DLSNTLINAIQSNEEAC 579
+ N LI+ C
Sbjct: 220 LIYNALISGFCRTGRIC 236
Score = 62.8 bits (151), Expect = 2e-07
Identities = 31/115 (26%), Positives = 57/115 (49%)
Frame = -2
Query: 977 QMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRAS 798
QM +G + + I LC+ + + + +M + G PD+ +N ++ +
Sbjct: 69 QMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLGYLPDIWAFNIYLNLLFHEN 128
Query: 797 RVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLD 633
R++ A+ +F M ++G PD VT+ ++I GL + KK A W+ M+E G D
Sbjct: 129 RIDLALEVFHKMVSKGREPDFVTYTIVIDGLCKAKKFDKAVQAWEHMIENGIKPD 183
Score = 62.8 bits (151), Expect = 2e-07
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 1/125 (0%)
Frame = -2
Query: 974 MSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRASR 795
M + G PD V ++++ C + A+ + +M GI PDV YN L+ G C +++
Sbjct: 245 MKRNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQ 304
Query: 794 VEGA-MHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCDLSN 618
++ A M + K M+ +GL D+V++ +I + + A ++++M +G LD
Sbjct: 305 LDKAYMFMVKKMEAKGLR-DKVSYNTVIEAFCKGGQTRRAYKLFEEMRRRGIELDVVTFT 363
Query: 617 TLINA 603
LI A
Sbjct: 364 ILIKA 368
Score = 60.1 bits (144), Expect = 1e-06
Identities = 37/132 (28%), Positives = 61/132 (46%)
Frame = -2
Query: 980 DQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRA 801
+ M + G+ PD L+ LC G + +A + ++ + V+ YNALISGFCR
Sbjct: 173 EHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRT 232
Query: 800 SRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCDLS 621
R+ AM + M+ G PD VT+ I+ E + A + +M G D
Sbjct: 233 GRICRAMAIKSFMKRNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSY 292
Query: 620 NTLINAIQSNEE 585
N L+ + ++ +
Sbjct: 293 NQLLKGLCNSNQ 304
>ref|XP_006438222.1| hypothetical protein CICLE_v10031251mg [Citrus clementina]
gi|557540418|gb|ESR51462.1| hypothetical protein
CICLE_v10031251mg [Citrus clementina]
Length = 517
Score = 177 bits (449), Expect = 6e-42
Identities = 84/135 (62%), Positives = 106/135 (78%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
LL+QM M L+PDR+L TT+ID LCK+ IG A +F DM+EQGI PDV+ YNALI+G C
Sbjct: 381 LLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLC 440
Query: 806 RASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCD 627
++SRV AMHL+++MQ RG HPDEVTFK++IGGL+QEKK+ +AC +WDQMMEKGFTLD
Sbjct: 441 KSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKT 500
Query: 626 LSNTLINAIQSNEEA 582
+S LI AI + A
Sbjct: 501 VSAALIEAIHLQDAA 515
Score = 65.5 bits (158), Expect = 3e-08
Identities = 38/134 (28%), Positives = 63/134 (47%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
L+ +M G+ PD L+ LC + + A +E D V YN +I FC
Sbjct: 276 LVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFC 335
Query: 806 RASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCD 627
+ + A LF++M+ RG+ D VTF ++I ++E MA + +QM + D
Sbjct: 336 KGGQTRRAYKLFEEMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRI 395
Query: 626 LSNTLINAIQSNEE 585
L T+I+ + + E
Sbjct: 396 LYTTIIDCLCKSRE 409
Score = 64.3 bits (155), Expect = 7e-08
Identities = 32/104 (30%), Positives = 53/104 (50%)
Frame = -2
Query: 989 MLLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGF 810
+LLD M K+G PD ++ L I +A +FH M+ +G PD V Y +I G
Sbjct: 100 ILLDNMDKLGYLPDIWAFNIYLNLLFHENRIDLALEVFHKMVSKGREPDFVTYTIVIDGL 159
Query: 809 CRASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMA 678
C+A + + A+ ++ M G+ PD ++ GL + K+ +A
Sbjct: 160 CKAKKFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLA 203
Score = 62.8 bits (151), Expect = 2e-07
Identities = 31/115 (26%), Positives = 57/115 (49%)
Frame = -2
Query: 977 QMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRAS 798
QM +G + + I LC+ + + + +M + G PD+ +N ++ +
Sbjct: 69 QMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLGYLPDIWAFNIYLNLLFHEN 128
Query: 797 RVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLD 633
R++ A+ +F M ++G PD VT+ ++I GL + KK A W+ M+E G D
Sbjct: 129 RIDLALEVFHKMVSKGREPDFVTYTIVIDGLCKAKKFDKAVQAWEHMIENGIKPD 183
Score = 62.8 bits (151), Expect = 2e-07
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 1/125 (0%)
Frame = -2
Query: 974 MSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRASR 795
M + G PD V ++++ C + A+ + +M GI PDV YN L+ G C +++
Sbjct: 245 MKRNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQ 304
Query: 794 VEGA-MHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCDLSN 618
++ A M + K M+ +GL D+V++ +I + + A ++++M +G LD
Sbjct: 305 LDKAYMFMVKKMEAKGLR-DKVSYNTVIEAFCKGGQTRRAYKLFEEMRRRGIELDVVTFT 363
Query: 617 TLINA 603
LI A
Sbjct: 364 ILIKA 368
Score = 60.8 bits (146), Expect = 8e-07
Identities = 46/166 (27%), Positives = 64/166 (38%), Gaps = 35/166 (21%)
Frame = -2
Query: 977 QMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPD--------------- 843
+M G PD V T +ID LCK A + M+E GI PD
Sbjct: 139 KMVSKGREPDFVTYTIVIDGLCKAKKFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDG 198
Query: 842 --------------------VVCYNALISGFCRASRVEGAMHLFKDMQTRGLHPDEVTFK 723
V+ YNALISGFCR R+ AM + M+ G PD VT+
Sbjct: 199 KVDLAYERTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKRNGCEPDLVTYN 258
Query: 722 VIIGGLIQEKKITMACAVWDQMMEKGFTLDCDLSNTLINAIQSNEE 585
I+ E + A + +M G D N L+ + ++ +
Sbjct: 259 AILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQ 304
>ref|XP_006417164.1| hypothetical protein EUTSA_v10007381mg [Eutrema salsugineum]
gi|557094935|gb|ESQ35517.1| hypothetical protein
EUTSA_v10007381mg [Eutrema salsugineum]
Length = 517
Score = 174 bits (440), Expect = 6e-41
Identities = 81/130 (62%), Positives = 105/130 (80%)
Frame = -2
Query: 992 KMLLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISG 813
K LLDQM+++GL+PDR+ TT++DHLCK+G++ A +F+DM+E GI PD + YNALISG
Sbjct: 380 KKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHGITPDAISYNALISG 439
Query: 812 FCRASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLD 633
CR+ RV AM LFKDMQ++ PDE+TFK IIGGLI+EKK++ A VWDQMM+KGFTLD
Sbjct: 440 LCRSCRVTEAMKLFKDMQSKECCPDELTFKFIIGGLIREKKLSAAYKVWDQMMDKGFTLD 499
Query: 632 CDLSNTLINA 603
D+S+TLI A
Sbjct: 500 RDVSDTLIKA 509
Score = 67.8 bits (164), Expect = 6e-09
Identities = 40/131 (30%), Positives = 65/131 (49%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
LL M +G PD +D LC+ +G A F M+ +G PDVV Y LI+G
Sbjct: 101 LLRDMETLGYIPDIWAFNIYLDLLCREREVGFAVQTFFCMVRRGREPDVVSYTILINGLF 160
Query: 806 RASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCD 627
RA +V A+ + +M G++PD ++ GL +K+ +A ++ + E+ +
Sbjct: 161 RAGKVTDAVEFWNEMIRSGINPDNKACASLVVGLCDARKVDLA---YEMVAEEIKSARVK 217
Query: 626 LSNTLINAIQS 594
LS + NA+ S
Sbjct: 218 LSTVVYNALIS 228
Score = 66.6 bits (161), Expect = 1e-08
Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Frame = -2
Query: 980 DQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQG-IAPDVVCYNALISGFCR 804
++M + G+ PD +L+ LC + +A M + ++ + V YNALISGFCR
Sbjct: 173 NEMIRSGINPDNKACASLVVGLCDARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCR 232
Query: 803 ASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCDL 624
A R+E A L M G PD VT+ V++ + A V +M+ G D
Sbjct: 233 AGRIEKAEALKSFMSKSGCSPDLVTYNVLLNYYYDHNMLKKAEGVMSEMVRSGIQPDAYS 292
Query: 623 SNTLI 609
N L+
Sbjct: 293 YNQLL 297
Score = 64.7 bits (156), Expect = 5e-08
Identities = 35/118 (29%), Positives = 54/118 (45%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
L M+ MG + + I LCK + ++ DM G PD+ +N + C
Sbjct: 66 LYRDMTPMGFSLIPFTYSRFISGLCKVRKFDLIDALLRDMETLGYIPDIWAFNIYLDLLC 125
Query: 806 RASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLD 633
R V A+ F M RG PD V++ ++I GL + K+T A W++M+ G D
Sbjct: 126 REREVGFAVQTFFCMVRRGREPDVVSYTILINGLFRAGKVTDAVEFWNEMIRSGINPD 183
Score = 64.3 bits (155), Expect = 7e-08
Identities = 37/127 (29%), Positives = 64/127 (50%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
++ +M + G+ PD L+ C+ G S+ +E DVV Y+ LI FC
Sbjct: 277 VMSEMVRSGIQPDAYSYNQLLKRHCRVGVPDKCYSLMVKEMEPRGFCDVVSYSTLIETFC 336
Query: 806 RASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCD 627
RAS A LF++M+ +G+ + VT+ +I ++E ++A + DQM E G + D
Sbjct: 337 RASNTRKAYKLFEEMRQKGIVTNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRI 396
Query: 626 LSNTLIN 606
T+++
Sbjct: 397 FYTTILD 403
>ref|XP_004504137.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cicer arietinum]
Length = 516
Score = 174 bits (440), Expect = 6e-41
Identities = 81/135 (60%), Positives = 106/135 (78%)
Frame = -2
Query: 992 KMLLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISG 813
K LLDQM+ MG+ PD + TT++D LCK + +A +F DM+E G++PDVV YNALI+G
Sbjct: 380 KKLLDQMTTMGIVPDLIFYTTIVDRLCKAWKVDIAHGVFCDMVENGVSPDVVSYNALING 439
Query: 812 FCRASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLD 633
FC+ASRV AM L+ +MQ +GL+PD VTFK+I+GGLI+E KI+ AC VWDQMMEKGFTLD
Sbjct: 440 FCKASRVMDAMCLYDEMQDKGLYPDGVTFKLIVGGLIRENKISEACKVWDQMMEKGFTLD 499
Query: 632 CDLSNTLINAIQSNE 588
LS TL+NA++S +
Sbjct: 500 RRLSETLVNAMKSRD 514
Score = 75.5 bits (184), Expect = 3e-11
Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQ-SMFHDMLEQGIAPDVVCYNALISGF 810
L++ M + G+ PD L+ CK + A +M M +G+ DVV YN +I+ F
Sbjct: 277 LVESMERSGVEPDLYSYNELLKGFCKANQVDRAYLTMVKRMQTKGMC-DVVSYNTIIAAF 335
Query: 809 CRASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDC 630
C+A R+E LF++M+ +G+ PD +TF V+I +E +A + DQM G D
Sbjct: 336 CKARRIERGYELFEEMRRKGIQPDVITFTVLIEAFFKEGGSDVAKKLLDQMTTMGIVPDL 395
Query: 629 DLSNTLINAI 600
T+++ +
Sbjct: 396 IFYTTIVDRL 405
Score = 67.8 bits (164), Expect = 6e-09
Identities = 38/125 (30%), Positives = 64/125 (51%), Gaps = 1/125 (0%)
Frame = -2
Query: 974 MSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRASR 795
MS+ G PD V L+++ C + + M G+ PD+ YN L+ GFC+A++
Sbjct: 246 MSRNGCVPDLVTYNILLNYCCDEVMLDEVVKLVESMERSGVEPDLYSYNELLKGFCKANQ 305
Query: 794 VEGA-MHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCDLSN 618
V+ A + + K MQT+G+ D V++ II + ++I ++++M KG D
Sbjct: 306 VDRAYLTMVKRMQTKGM-CDVVSYNTIIAAFCKARRIERGYELFEEMRRKGIQPDVITFT 364
Query: 617 TLINA 603
LI A
Sbjct: 365 VLIEA 369
Score = 66.6 bits (161), Expect = 1e-08
Identities = 29/103 (28%), Positives = 53/103 (51%)
Frame = -2
Query: 917 LCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRASRVEGAMHLFKDMQTRGLHPD 738
LC + + + DM G PD+ +N ++ CR +++E A+ LF+ M +G PD
Sbjct: 90 LCSVKNFSLIDYLLRDMDALGFVPDIWAFNIYLNLLCRENQLETALQLFRTMPLKGREPD 149
Query: 737 EVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCDLSNTLI 609
V++ +I+ L + K++ VW ++EKG D + L+
Sbjct: 150 VVSYNIIVNALCKAKRVDEVARVWRSLIEKGLKPDFKVCAALV 192
Score = 64.7 bits (156), Expect = 5e-08
Identities = 34/127 (26%), Positives = 62/127 (48%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
LL M +G PD ++ LC+ + A +F M +G PDVV YN +++ C
Sbjct: 102 LLRDMDALGFVPDIWAFNIYLNLLCRENQLETALQLFRTMPLKGREPDVVSYNIIVNALC 161
Query: 806 RASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCD 627
+A RV+ +++ + +GL PD ++ GL + +A + ++ G ++C
Sbjct: 162 KAKRVDEVARVWRSLIEKGLKPDFKVCAALVVGLCSAGNVDLAYELIVGVINGGVKVNCL 221
Query: 626 LSNTLIN 606
+ N LI+
Sbjct: 222 VYNALIS 228
Score = 63.5 bits (153), Expect = 1e-07
Identities = 34/118 (28%), Positives = 57/118 (48%)
Frame = -2
Query: 962 GLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRASRVEGA 783
GL PD + L+ LC G++ +A + ++ G+ + + YNALISGFCR R++ A
Sbjct: 180 GLKPDFKVCAALVVGLCSAGNVDLAYELIVGVINGGVKVNCLVYNALISGFCRMGRIDKA 239
Query: 782 MHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCDLSNTLI 609
+ + M G PD VT+ +++ E + + + M G D N L+
Sbjct: 240 LAIKGFMSRNGCVPDLVTYNILLNYCCDEVMLDEVVKLVESMERSGVEPDLYSYNELL 297
>ref|XP_002312667.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222852487|gb|EEE90034.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 512
Score = 169 bits (428), Expect = 2e-39
Identities = 81/133 (60%), Positives = 102/133 (76%)
Frame = -2
Query: 992 KMLLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISG 813
K LLD M+ MGL PDR+ TT+IDH CK+G + MA S+F DM+E+GI PDVV YNALI+G
Sbjct: 380 KKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALING 439
Query: 812 FCRASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLD 633
FC++ RV MHL++ M RG PDEVT+K+IIG L++E K++ AC VWDQMME+G TLD
Sbjct: 440 FCKSLRVGEVMHLYEQMLQRGSFPDEVTYKLIIGALVRENKLSDACRVWDQMMERGLTLD 499
Query: 632 CDLSNTLINAIQS 594
+S LINAIQS
Sbjct: 500 RGISEMLINAIQS 512
Score = 66.6 bits (161), Expect = 1e-08
Identities = 36/115 (31%), Positives = 56/115 (48%)
Frame = -2
Query: 977 QMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRAS 798
+M+ +G + + I LC+T ++ DM + PD+ +N ++ R +
Sbjct: 69 KMAPLGFSLSSFTYSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFREN 128
Query: 797 RVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLD 633
R E A+ +F M RG PD VTF +II GL + KK A W M++KG D
Sbjct: 129 REESALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPD 183
>ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
gi|449494962|ref|XP_004159696.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
Length = 514
Score = 165 bits (418), Expect = 2e-38
Identities = 79/135 (58%), Positives = 106/135 (78%)
Frame = -2
Query: 992 KMLLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISG 813
K LL M++ L PD + TT++D+ CKT I MAQ +F DM+E GI+PDVV YNALI+G
Sbjct: 378 KGLLQTMTQTVLIPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIGISPDVVSYNALING 437
Query: 812 FCRASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLD 633
C+AS+V AM L+++MQ RG +PDEVTFK+IIGGL+++K++++AC VWDQMMEKG+TLD
Sbjct: 438 LCKASKVSEAMLLYEEMQIRGCYPDEVTFKLIIGGLLRKKELSLACQVWDQMMEKGYTLD 497
Query: 632 CDLSNTLINAIQSNE 588
LS TLI AI+S +
Sbjct: 498 KFLSETLIKAIRSRD 512
Score = 64.3 bits (155), Expect = 7e-08
Identities = 39/124 (31%), Positives = 60/124 (48%)
Frame = -2
Query: 974 MSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRASR 795
MSK G PD + L++ C + +A M G+ PDV YN L+ G C+A+R
Sbjct: 245 MSKHGCEPDLITYNILLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANR 304
Query: 794 VEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCDLSNT 615
++ A L M +GL D V++ +IG L + A ++++M +K D T
Sbjct: 305 LDKAYKLMNTMWEKGL-CDTVSYNTVIGALCKSFATRKAYRLFEEMGQKDVAPDVGTFAT 363
Query: 614 LINA 603
LI A
Sbjct: 364 LIKA 367
Score = 60.8 bits (146), Expect = 8e-07
Identities = 34/117 (29%), Positives = 61/117 (52%)
Frame = -2
Query: 950 DRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRASRVEGAMHLF 771
+ ++ +L+ CK+G I A ++ M + G PD++ YN L++ FC +E A
Sbjct: 218 NNLIFNSLMSGFCKSGRISKALAIKSFMSKHGCEPDLITYNILLNFFCDGLMLELAGKSM 277
Query: 770 KDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCDLSNTLINAI 600
K M+ G+ PD ++ ++ GL + ++ A + + M EKG D NT+I A+
Sbjct: 278 KKMERIGMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMWEKGL-CDTVSYNTVIGAL 333
Score = 59.7 bits (143), Expect = 2e-06
Identities = 32/123 (26%), Positives = 57/123 (46%)
Frame = -2
Query: 977 QMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRAS 798
+M G + + I LC+ + G+ + DM + G PD+ +N ++ R +
Sbjct: 69 RMIPQGFSLTPFTYSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFREN 128
Query: 797 RVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCDLSN 618
+E A+ F +M +G PD VT+ +I+ L + K+ A W M+ KG + D
Sbjct: 129 LLELALKFFDEMVAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACT 188
Query: 617 TLI 609
L+
Sbjct: 189 ALV 191
Score = 57.8 bits (138), Expect = 6e-06
Identities = 34/125 (27%), Positives = 57/125 (45%)
Frame = -2
Query: 980 DQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRA 801
D+M G PD V T ++D LCK A + M+ +G++PD+ AL+ G C
Sbjct: 138 DEMVAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACTALVVGLCDG 197
Query: 800 SRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCDLS 621
+V+ A L + + + F ++ G + +I+ A A+ M + G D
Sbjct: 198 GKVDLAYELTVGEMKGEMKFNNLIFNSLMSGFCKSGRISKALAIKSFMSKHGCEPDLITY 257
Query: 620 NTLIN 606
N L+N
Sbjct: 258 NILLN 262
>ref|XP_002889980.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297335822|gb|EFH66239.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 517
Score = 164 bits (415), Expect = 5e-38
Identities = 76/130 (58%), Positives = 103/130 (79%)
Frame = -2
Query: 992 KMLLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISG 813
K LLDQM+++GL+PDR+ TT++DHLCK+G++ A +F+DM+E I PD + YN+LISG
Sbjct: 380 KKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISG 439
Query: 812 FCRASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLD 633
CR+ RV A+ LF+DM+ + PDE+TFK IIGGLI+EKK++ A VWDQMM+KGFTLD
Sbjct: 440 LCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIREKKLSAAYKVWDQMMDKGFTLD 499
Query: 632 CDLSNTLINA 603
D+S+TLI A
Sbjct: 500 RDVSDTLIKA 509
Score = 67.4 bits (163), Expect = 8e-09
Identities = 40/131 (30%), Positives = 65/131 (49%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
LL M +G PD +D LC+ +G A F M+++G PDVV Y LI+G
Sbjct: 101 LLRDMETLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLF 160
Query: 806 RASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCD 627
RA +V A+ ++ M G+ PD ++ GL +K+ +A ++ + E+ +
Sbjct: 161 RAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLA---YEMVAEEIKSARVK 217
Query: 626 LSNTLINAIQS 594
LS + NA+ S
Sbjct: 218 LSIVVYNALIS 228
Score = 67.0 bits (162), Expect = 1e-08
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Frame = -2
Query: 974 MSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQG-IAPDVVCYNALISGFCRAS 798
M + G++PD L+ LC + +A M + ++ + +V YNALISGFC+A
Sbjct: 175 MIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSIVVYNALISGFCKAG 234
Query: 797 RVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCDLSN 618
R+E A L M G PD VT+ V++ + A V +M+ G LD N
Sbjct: 235 RIEKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSGIQLDAYSYN 294
Query: 617 TLI 609
L+
Sbjct: 295 QLL 297
Score = 65.5 bits (158), Expect = 3e-08
Identities = 34/114 (29%), Positives = 55/114 (48%)
Frame = -2
Query: 974 MSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRASR 795
M MG + + I LCK + ++ DM G PD+ +N + CR ++
Sbjct: 70 MMPMGFSLIPFTYSRFISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLCRENK 129
Query: 794 VEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLD 633
V A+ F M RG PD V++ ++I GL + K+T A +W+ M+ G + D
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPD 183
Score = 59.3 bits (142), Expect = 2e-06
Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQS-MFHDMLEQGIAPDVVCYNALISGF 810
++ +M + G+ D L+ C+ S M +M +G DVV Y+ LI F
Sbjct: 277 VMTEMVRSGIQLDAYSYNQLLKRHCRVSHPDRCYSFMLKEMEPRGFC-DVVSYSTLIETF 335
Query: 809 CRASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDC 630
CRAS + A LF++M+ +G+ + VTF +I ++E ++A + DQM E G + D
Sbjct: 336 CRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDR 395
Query: 629 DLSNTLIN 606
T+++
Sbjct: 396 IFYTTILD 403
>ref|XP_006304861.1| hypothetical protein CARUB_v10012598mg [Capsella rubella]
gi|482573572|gb|EOA37759.1| hypothetical protein
CARUB_v10012598mg [Capsella rubella]
Length = 517
Score = 162 bits (409), Expect = 2e-37
Identities = 76/130 (58%), Positives = 101/130 (77%)
Frame = -2
Query: 992 KMLLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISG 813
K LLDQM+++GL+PDR+ TT+++HLCK+G+I A +F DM+E I PD + YN+LI G
Sbjct: 380 KKLLDQMTELGLSPDRIFYTTILNHLCKSGNIDKAYGVFSDMIEHRITPDAISYNSLICG 439
Query: 812 FCRASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLD 633
CRA RV A+ LF+DMQ++ PDE+TFK IIGGLI+E K++ A VWDQMM+KGFTLD
Sbjct: 440 LCRACRVTEAIKLFEDMQSKECCPDELTFKFIIGGLIRENKVSAAYKVWDQMMDKGFTLD 499
Query: 632 CDLSNTLINA 603
D+S+TLI A
Sbjct: 500 RDVSDTLIKA 509
Score = 70.5 bits (171), Expect = 1e-09
Identities = 40/131 (30%), Positives = 66/131 (50%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
LL M +G PD +D LC+ +G A F M+++G PDVV Y LI+G
Sbjct: 101 LLRDMETLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLF 160
Query: 806 RASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCD 627
RA +V A+ ++ +M G+ PD ++ GL +K+ +A ++ + E+ +
Sbjct: 161 RAGKVTDAVEIWNEMIRSGVRPDNKACAALVVGLCHARKVDLA---YEMVAEEIKSARVK 217
Query: 626 LSNTLINAIQS 594
LS + NA+ S
Sbjct: 218 LSTVVYNALIS 228
Score = 66.6 bits (161), Expect = 1e-08
Identities = 34/114 (29%), Positives = 55/114 (48%)
Frame = -2
Query: 974 MSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRASR 795
M MG + + I LCK + ++ DM G PD+ +N + CR ++
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLRDMETLGFIPDIWAFNIYLDLLCRENK 129
Query: 794 VEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLD 633
V A+ F M RG PD V++ ++I GL + K+T A +W++M+ G D
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNEMIRSGVRPD 183
Score = 63.2 bits (152), Expect = 2e-07
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Frame = -2
Query: 980 DQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQG-IAPDVVCYNALISGFCR 804
++M + G+ PD L+ LC + +A M + ++ + V YNALISGFC+
Sbjct: 173 NEMIRSGVRPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCK 232
Query: 803 ASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCDL 624
A R+E A L M PD VT+ V++ + + A V +M+ G LD
Sbjct: 233 AGRIEKAEALKSFMNKIECEPDLVTYNVLLNYYYENNLLKKAEGVMTEMVRSGVELDAYS 292
Query: 623 SNTLI 609
N L+
Sbjct: 293 YNQLL 297
Score = 59.7 bits (143), Expect = 2e-06
Identities = 36/127 (28%), Positives = 62/127 (48%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
++ +M + G+ D L+ C+ S +E DVV Y+ LI +C
Sbjct: 277 VMTEMVRSGVELDAYSYNQLLKRHCRVSHPDKCYSFMVKEMEPRGFCDVVSYSTLIETYC 336
Query: 806 RASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCD 627
RAS A LF++M+ +G+ + VT+ +I ++E K ++A + DQM E G + D
Sbjct: 337 RASNTRKAYKLFEEMRQKGIVTNVVTYTSLIKAFLREGKSSVAKKLLDQMTELGLSPDRI 396
Query: 626 LSNTLIN 606
T++N
Sbjct: 397 FYTTILN 403
>ref|NP_172763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200670|sp|Q9SAD9.1|PPR40_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g13040, mitochondrial; Flags: Precursor
gi|4850387|gb|AAD31057.1|AC007357_6 F3F19.6 [Arabidopsis
thaliana] gi|332190841|gb|AEE28962.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 161 bits (408), Expect = 3e-37
Identities = 75/130 (57%), Positives = 102/130 (78%)
Frame = -2
Query: 992 KMLLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISG 813
K LLDQM+++GL+PDR+ TT++DHLCK+G++ A +F+DM+E I PD + YN+LISG
Sbjct: 380 KKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISG 439
Query: 812 FCRASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLD 633
CR+ RV A+ LF+DM+ + PDE+TFK IIGGLI+ KK++ A VWDQMM+KGFTLD
Sbjct: 440 LCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLD 499
Query: 632 CDLSNTLINA 603
D+S+TLI A
Sbjct: 500 RDVSDTLIKA 509
Score = 69.7 bits (169), Expect = 2e-09
Identities = 40/131 (30%), Positives = 65/131 (49%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
LL M +G PD +D LC+ +G A F M+++G PDVV Y LI+G
Sbjct: 101 LLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLF 160
Query: 806 RASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCD 627
RA +V A+ ++ M G+ PD ++ GL +K+ +A ++ + E+ +
Sbjct: 161 RAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLA---YEMVAEEIKSARVK 217
Query: 626 LSNTLINAIQS 594
LS + NA+ S
Sbjct: 218 LSTVVYNALIS 228
Score = 66.2 bits (160), Expect = 2e-08
Identities = 34/114 (29%), Positives = 55/114 (48%)
Frame = -2
Query: 974 MSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRASR 795
M MG + + I LCK + ++ DM G PD+ +N + CR ++
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129
Query: 794 VEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLD 633
V A+ F M RG PD V++ ++I GL + K+T A +W+ M+ G + D
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPD 183
Score = 65.5 bits (158), Expect = 3e-08
Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Frame = -2
Query: 974 MSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQG-IAPDVVCYNALISGFCRAS 798
M + G++PD L+ LC + +A M + ++ + V YNALISGFC+A
Sbjct: 175 MIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAG 234
Query: 797 RVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCDLSN 618
R+E A L M G PD VT+ V++ + A V +M+ G LD N
Sbjct: 235 RIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYN 294
Query: 617 TLI 609
L+
Sbjct: 295 QLL 297
>ref|XP_006836595.1| hypothetical protein AMTR_s00131p00098210 [Amborella trichopoda]
gi|548839134|gb|ERM99448.1| hypothetical protein
AMTR_s00131p00098210 [Amborella trichopoda]
Length = 704
Score = 135 bits (339), Expect = 3e-29
Identities = 57/130 (43%), Positives = 92/130 (70%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
L +Q+ +G PD V TT+ DHLCK+G + A+S+F +M++ G+ PD++ YNALI G C
Sbjct: 544 LFNQILDVGFVPDVVTYTTMFDHLCKSGRVEQARSLFFNMIKNGVRPDMISYNALIDGLC 603
Query: 806 RASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCD 627
+A V A+ ++++M G PDEVT+ ++IGGL++++K+ MAC +WDQMMEKG LD
Sbjct: 604 KAFMVSEAVEVYEEMVHGGCEPDEVTYHLLIGGLLRDEKLGMACKIWDQMMEKGLVLDTV 663
Query: 626 LSNTLINAIQ 597
+ L+++++
Sbjct: 664 VGEALVDSVR 673
Score = 73.9 bits (180), Expect = 9e-11
Identities = 36/127 (28%), Positives = 64/127 (50%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
L+++M + G+ PD+ L+ C + A + D +E DVV YN ++ C
Sbjct: 439 LIEKMKRYGINPDKYSYNILLKGYCNANQLDKAYLLLVDKMESKEIFDVVSYNTIVGALC 498
Query: 806 RASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCD 627
R R A L ++M +G+ PD VT+ +I G +E I +A +++Q+++ GF D
Sbjct: 499 RVRRAGTAYKLMEEMSMKGISPDVVTYSSLINGFFREGHIDLAEELFNQILDVGFVPDVV 558
Query: 626 LSNTLIN 606
T+ +
Sbjct: 559 TYTTMFD 565
Score = 72.8 bits (177), Expect = 2e-10
Identities = 38/131 (29%), Positives = 67/131 (51%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
LL + KMG PD ++ LC+ + +A ++ DM + I P+ V Y +I+G C
Sbjct: 265 LLSDIYKMGYAPDIWAYNKYMNSLCRLNKLDLALTLLEDMTRR-IKPNPVTYTIIINGLC 323
Query: 806 RASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCD 627
R R + A+ ++ +M +G PD + ++ GL + K+ +A V +++ +G L
Sbjct: 324 RKERFQSALEVWNEMIRKGFEPDLIACGTLVFGLCKHSKVDLAYGVAMRVITRGIALTTP 383
Query: 626 LSNTLINAIQS 594
+ N LIN S
Sbjct: 384 VYNALINGFCS 394
Score = 72.4 bits (176), Expect = 3e-10
Identities = 37/128 (28%), Positives = 67/128 (52%)
Frame = -2
Query: 992 KMLLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISG 813
K ++M + G + I L + + + D+ + G APD+ YN ++
Sbjct: 228 KKYYERMVRKGYPLTTFTYSRFISGLSDANDLEYIEKLLSDIYKMGYAPDIWAYNKYMNS 287
Query: 812 FCRASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLD 633
CR ++++ A+ L +DM TR + P+ VT+ +II GL ++++ A VW++M+ KGF D
Sbjct: 288 LCRLNKLDLALTLLEDM-TRRIKPNPVTYTIIINGLCRKERFQSALEVWNEMIRKGFEPD 346
Query: 632 CDLSNTLI 609
TL+
Sbjct: 347 LIACGTLV 354
Score = 67.0 bits (162), Expect = 1e-08
Identities = 36/123 (29%), Positives = 62/123 (50%)
Frame = -2
Query: 974 MSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRASR 795
M + G TPD V T++++ C + A+ + M GI PD YN L+ G+C A++
Sbjct: 408 MRRNGCTPDLVTYNTMLNYCCNENLVFEAEKLIEKMKRYGINPDKYSYNILLKGYCNANQ 467
Query: 794 VEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCDLSNT 615
++ A L D D V++ I+G L + ++ A + ++M KG + D ++
Sbjct: 468 LDKAYLLLVDKMESKEIFDVVSYNTIVGALCRVRRAGTAYKLMEEMSMKGISPDVVTYSS 527
Query: 614 LIN 606
LIN
Sbjct: 528 LIN 530
Score = 62.8 bits (151), Expect = 2e-07
Identities = 36/124 (29%), Positives = 60/124 (48%)
Frame = -2
Query: 980 DQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFCRA 801
++M + G PD + TL+ LCK + +A + ++ +GIA YNALI+GFC
Sbjct: 336 NEMIRKGFEPDLIACGTLVFGLCKHSKVDLAYGVAMRVITRGIALTTPVYNALINGFCSI 395
Query: 800 SRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCDLS 621
R++ A + M+ G PD VT+ ++ E + A + ++M G D
Sbjct: 396 GRIDKAQAIVAFMRRNGCTPDLVTYNTMLNYCCNENLVFEAEKLIEKMKRYGINPDKYSY 455
Query: 620 NTLI 609
N L+
Sbjct: 456 NILL 459
Score = 58.9 bits (141), Expect = 3e-06
Identities = 35/127 (27%), Positives = 64/127 (50%)
Frame = -2
Query: 986 LLDQMSKMGLTPDRVLLTTLIDHLCKTGSIGMAQSMFHDMLEQGIAPDVVCYNALISGFC 807
LL+ M++ + P+ V T +I+ LC+ A ++++M+ +G PD++ L+ G C
Sbjct: 300 LLEDMTRR-IKPNPVTYTIIINGLCRKERFQSALEVWNEMIRKGFEPDLIACGTLVFGLC 358
Query: 806 RASRVEGAMHLFKDMQTRGLHPDEVTFKVIIGGLIQEKKITMACAVWDQMMEKGFTLDCD 627
+ S+V+ A + + TRG+ + +I G +I A A+ M G T D
Sbjct: 359 KHSKVDLAYGVAMRVITRGIALTTPVYNALINGFCSIGRIDKAQAIVAFMRRNGCTPDLV 418
Query: 626 LSNTLIN 606
NT++N
Sbjct: 419 TYNTMLN 425