BLASTX nr result
ID: Catharanthus22_contig00013891
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00013891
(947 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEC75230.1| hypothetical protein OsI_11503 [Oryza sativa Indi... 51 5e-18
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga... 56 6e-18
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga... 53 2e-17
gb|EMJ13999.1| hypothetical protein PRUPE_ppa020180mg [Prunus pe... 53 2e-17
ref|XP_004301927.1| PREDICTED: putative ribonuclease H protein A... 57 4e-17
ref|XP_004298219.1| PREDICTED: uncharacterized protein LOC101304... 54 8e-17
ref|XP_004980332.1| PREDICTED: uncharacterized protein LOC101786... 54 9e-17
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 52 1e-16
gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [... 50 1e-16
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga... 56 3e-16
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ... 57 4e-16
gb|ABA97563.1| retrotransposon protein, putative, unclassified [... 55 5e-16
gb|EPS72636.1| hypothetical protein M569_02121, partial [Genlise... 50 9e-16
ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group] g... 52 9e-16
gb|EEE67582.1| hypothetical protein OsJ_25113 [Oryza sativa Japo... 52 9e-16
emb|CAB75484.1| putative protein [Arabidopsis thaliana] 62 1e-15
gb|ABA98898.1| retrotransposon protein, putative, unclassified [... 54 2e-15
gb|EAZ20803.1| hypothetical protein OsJ_36426 [Oryza sativa Japo... 54 2e-15
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta... 64 5e-15
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta... 64 5e-15
>gb|EEC75230.1| hypothetical protein OsI_11503 [Oryza sativa Indica Group]
Length = 746
Score = 51.2 bits (121), Expect(4) = 5e-18
Identities = 22/41 (53%), Positives = 33/41 (80%)
Frame = -3
Query: 276 IKDYRPIGLCNVIYKLISKTIVNTLKSHMPSIINDSQSAFV 154
+K++RPI LCNVIYK++SK +VN L+ + II+ +QSAF+
Sbjct: 119 LKEFRPISLCNVIYKVVSKCMVNRLRPILKDIISVTQSAFI 159
Score = 38.5 bits (88), Expect(4) = 5e-18
Identities = 22/51 (43%), Positives = 30/51 (58%)
Frame = -2
Query: 160 FC*KRLITGIFIIAFEAFGSVXXXXXXXXXNHFAHKLDLSKAFDRVEWNFL 8
F +RLIT +IAFE + A+KLDL+KA+DRV+W+FL
Sbjct: 158 FIPERLITDNALIAFECIHHIQKETSAGKQF-CAYKLDLAKAYDRVDWDFL 207
Score = 35.8 bits (81), Expect(4) = 5e-18
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -2
Query: 490 LVWKTRSRADWLAEGDENTTYFH 422
++W RSR WL EGD NT +FH
Sbjct: 10 IMWLQRSRVAWLKEGDRNTKFFH 32
Score = 32.0 bits (71), Expect(4) = 5e-18
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 428 LSSCYLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKHP 285
LS W++L +VT V G ++ NDT+I LIPK+ P
Sbjct: 69 LSGKIFPAQWAVLKKEVTTAVRNFFLQGVMLAGVNDTSIVLIPKVSKP 116
>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 55.8 bits (133), Expect(3) = 6e-18
Identities = 25/39 (64%), Positives = 33/39 (84%)
Frame = -3
Query: 270 DYRPIGLCNVIYKLISKTIVNTLKSHMPSIINDSQSAFV 154
++RPI LCNV+YKL+SK IV LKS +P II+++QSAFV
Sbjct: 507 EFRPIALCNVLYKLMSKAIVMRLKSFLPEIISENQSAFV 545
Score = 42.7 bits (99), Expect(3) = 6e-18
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = -1
Query: 416 YLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKHP 285
+ ++W ++GD VT+ + IL+ S N+TNI LIPK+K+P
Sbjct: 459 FYQRFWHIVGDDVTSFISNILHGHSSPSCVNNTNIALIPKVKNP 502
Score = 39.3 bits (90), Expect(3) = 6e-18
Identities = 23/47 (48%), Positives = 27/47 (57%)
Frame = -2
Query: 148 RLITGIFIIAFEAFGSVXXXXXXXXXNHFAHKLDLSKAFDRVEWNFL 8
RLIT +IA E F S+ A KLD+SKA+DRVEW FL
Sbjct: 548 RLITDNALIAMEVFHSMKNRNRSRKGT-IAMKLDMSKAYDRVEWGFL 593
>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 52.8 bits (125), Expect(3) = 2e-17
Identities = 21/39 (53%), Positives = 32/39 (82%)
Frame = -3
Query: 270 DYRPIGLCNVIYKLISKTIVNTLKSHMPSIINDSQSAFV 154
++RPI LCNV+YKL+SK +V LK +P +++++QSAFV
Sbjct: 507 EFRPIALCNVVYKLVSKALVIRLKDFLPRLVSENQSAFV 545
Score = 43.9 bits (102), Expect(3) = 2e-17
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Frame = -1
Query: 428 LSSCYLDKYWSMLGDKVTNNVLGILNHGGDVSP--FNDTNICLIPKIKHP 285
+ + + K+W ++GD VT V IL+ G +SP N TNI LIPK+K+P
Sbjct: 455 MHAIFYQKFWHIIGDDVTQFVSSILH--GSISPSCINHTNIALIPKVKNP 502
Score = 39.3 bits (90), Expect(3) = 2e-17
Identities = 23/47 (48%), Positives = 27/47 (57%)
Frame = -2
Query: 148 RLITGIFIIAFEAFGSVXXXXXXXXXNHFAHKLDLSKAFDRVEWNFL 8
RLIT +IA E F S+ A KLD+SKA+DRVEW FL
Sbjct: 548 RLITDNALIAMEVFHSMKHRNRSRKGT-IAMKLDMSKAYDRVEWGFL 593
>gb|EMJ13999.1| hypothetical protein PRUPE_ppa020180mg [Prunus persica]
Length = 1072
Score = 53.1 bits (126), Expect(3) = 2e-17
Identities = 21/41 (51%), Positives = 32/41 (78%)
Frame = -3
Query: 276 IKDYRPIGLCNVIYKLISKTIVNTLKSHMPSIINDSQSAFV 154
+ ++RPI LC +YK+I+KTI N LK+ +P +I ++QSAFV
Sbjct: 454 VSEFRPISLCTTVYKMIAKTIANRLKTVLPHVITETQSAFV 494
Score = 50.1 bits (118), Expect(3) = 2e-17
Identities = 23/48 (47%), Positives = 29/48 (60%)
Frame = -1
Query: 428 LSSCYLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKHP 285
+ + + KYW ++GDKV L ILN G V FN T I LIPK+K P
Sbjct: 404 MPALFFQKYWHIVGDKVAKKCLQILNGEGSVREFNHTLIALIPKVKMP 451
Score = 32.7 bits (73), Expect(3) = 2e-17
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -2
Query: 160 FC*KRLITGIFIIAFEAFGSVXXXXXXXXXNHFAHKLDLSKAFDRVEWNFLES 2
F R+I + AFE ++ A KLD++KA+DRVEW FL +
Sbjct: 493 FVPNRMILDNVMAAFEIMNTIKGVKKRRDV-QMALKLDMAKAYDRVEWVFLRA 544
>ref|XP_004301927.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 968
Score = 57.0 bits (136), Expect(3) = 4e-17
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = -3
Query: 276 IKDYRPIGLCNVIYKLISKTIVNTLKSHMPSIINDSQSAF 157
+ D+RPI LCNVIYKLISK IVN LK +P +I+ QSAF
Sbjct: 130 VPDFRPISLCNVIYKLISKAIVNRLKGVLPDVISQFQSAF 169
Score = 46.6 bits (109), Expect(3) = 4e-17
Identities = 19/47 (40%), Positives = 33/47 (70%)
Frame = -1
Query: 425 SSCYLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKHP 285
S+ + +YWS++GD V++ L +LN G +++ N T I LIPK+++P
Sbjct: 81 SARFFQEYWSVVGDDVSDLCLRVLNEGAELTGINHTLIALIPKVENP 127
Score = 31.6 bits (70), Expect(3) = 4e-17
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -2
Query: 148 RLITGIFIIAFEAFGSVXXXXXXXXXNHFAHKLDLSKAFDRVEWNFLE 5
R I I AFE S+ H KLD+SKA+D VEW FL+
Sbjct: 173 RCIHDNVITAFELIHSIKTRQTGDQP-HCVLKLDISKAYDWVEWVFLQ 219
>ref|XP_004298219.1| PREDICTED: uncharacterized protein LOC101304768 [Fragaria vesca
subsp. vesca]
Length = 1687
Score = 53.9 bits (128), Expect(3) = 8e-17
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = -3
Query: 276 IKDYRPIGLCNVIYKLISKTIVNTLKSHMPSIINDSQSAFV 154
+ D+RPI LCNV+YKLISK +VN +K +P +I+ QSAFV
Sbjct: 505 VADFRPISLCNVLYKLISKAMVNRMKVLLPEVISCYQSAFV 545
Score = 47.8 bits (112), Expect(3) = 8e-17
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = -1
Query: 425 SSCYLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKHP 285
S+ + YW ++GD+V+N L +LN G V N T + LIPKI++P
Sbjct: 456 SARFYQAYWEIVGDEVSNRCLQVLNEGASVKDLNHTLLALIPKIENP 502
Score = 32.3 bits (72), Expect(3) = 8e-17
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = -2
Query: 55 KLDLSKAFDRVEWNFLES 2
KLD+SKA+DRVEW FL +
Sbjct: 578 KLDISKAYDRVEWIFLRN 595
>ref|XP_004980332.1| PREDICTED: uncharacterized protein LOC101786154 [Setaria italica]
Length = 720
Score = 53.9 bits (128), Expect(3) = 9e-17
Identities = 25/41 (60%), Positives = 31/41 (75%)
Frame = -3
Query: 276 IKDYRPIGLCNVIYKLISKTIVNTLKSHMPSIINDSQSAFV 154
+KD RPI LCNVIYK+ SK + N LK +P II+ +QSAFV
Sbjct: 510 LKDLRPISLCNVIYKITSKVLSNRLKLILPEIISQNQSAFV 550
Score = 43.5 bits (101), Expect(3) = 9e-17
Identities = 18/48 (37%), Positives = 31/48 (64%)
Frame = -1
Query: 428 LSSCYLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKHP 285
+SS + K+W+++G V VL LN G + +N+T + LIPK+++P
Sbjct: 460 MSSLFYKKHWNIVGADVVREVLNFLNDGSMPAKWNETVVVLIPKVQNP 507
Score = 36.6 bits (83), Expect(3) = 9e-17
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = -2
Query: 61 AHKLDLSKAFDRVEWNFLE 5
A KLD+SKA+DRVEWN+LE
Sbjct: 581 ALKLDMSKAYDRVEWNYLE 599
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 52.4 bits (124), Expect(3) = 1e-16
Identities = 20/39 (51%), Positives = 31/39 (79%)
Frame = -3
Query: 270 DYRPIGLCNVIYKLISKTIVNTLKSHMPSIINDSQSAFV 154
D+RPI LCNV+YK+++K + N +K +P +I++SQS FV
Sbjct: 512 DFRPISLCNVLYKIVAKVLANRMKMVLPMVIHESQSGFV 550
Score = 42.4 bits (98), Expect(3) = 1e-16
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = -1
Query: 428 LSSCYLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKH 288
+++ + +W +G+ VT VL +LN+ ++ N T+I LIPK KH
Sbjct: 460 MNALFYQHFWDTIGEDVTTKVLNMLNNVDNIGAVNQTHIVLIPKKKH 506
Score = 38.5 bits (88), Expect(3) = 1e-16
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = -2
Query: 148 RLITGIFIIAFEAFGSVXXXXXXXXXNHFAHKLDLSKAFDRVEWNFLES 2
RLIT ++A+E F + + KLD+SKA+DRVEW FLE+
Sbjct: 553 RLITDNVLVAYECFHFLRKKKTGKKG-YLGLKLDMSKAYDRVEWCFLEN 600
>gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [Prunus persica]
Length = 1060
Score = 50.4 bits (119), Expect(3) = 1e-16
Identities = 23/51 (45%), Positives = 30/51 (58%)
Frame = -1
Query: 428 LSSCYLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKHPIYI 276
+ + + KYW ++GDKV L ILN G V FN T I LIPK+K P +
Sbjct: 154 MPALFFQKYWHIVGDKVAKKCLQILNGEGSVREFNHTLIALIPKVKMPTIV 204
Score = 50.1 bits (118), Expect(3) = 1e-16
Identities = 20/41 (48%), Positives = 31/41 (75%)
Frame = -3
Query: 276 IKDYRPIGLCNVIYKLISKTIVNTLKSHMPSIINDSQSAFV 154
+ ++RPI LC +YK+I+KTI N LK+ + +I ++QSAFV
Sbjct: 204 VSEFRPISLCTTVYKMIAKTIANRLKTVLSHVITETQSAFV 244
Score = 32.7 bits (73), Expect(3) = 1e-16
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -2
Query: 160 FC*KRLITGIFIIAFEAFGSVXXXXXXXXXNHFAHKLDLSKAFDRVEWNFLES 2
F R+I + AFE ++ A KLD++KA+DRVEW FL +
Sbjct: 243 FVPNRMILDNVMAAFEIMNTIKGVKKGRDV-QMALKLDMAKAYDRVEWVFLRA 294
>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1362
Score = 56.2 bits (134), Expect(3) = 3e-16
Identities = 24/43 (55%), Positives = 35/43 (81%)
Frame = -3
Query: 276 IKDYRPIGLCNVIYKLISKTIVNTLKSHMPSIINDSQSAFVEK 148
+KD+RPI LC V+YK++SKT+ N LK +P+II+ +QSAFV +
Sbjct: 504 MKDFRPISLCTVLYKILSKTLANRLKVILPAIISPNQSAFVPR 546
Score = 40.4 bits (93), Expect(3) = 3e-16
Identities = 24/52 (46%), Positives = 31/52 (59%)
Frame = -2
Query: 160 FC*KRLITGIFIIAFEAFGSVXXXXXXXXXNHFAHKLDLSKAFDRVEWNFLE 5
F +RLIT ++AFE F ++ A KLD+SKA+DRVEW FLE
Sbjct: 543 FVPRRLITDNALVAFEIFHAMKRKDANKNGV-CALKLDMSKAYDRVEWCFLE 593
Score = 35.4 bits (80), Expect(3) = 3e-16
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -1
Query: 428 LSSCYLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKHP 285
L + + K+W +LG V + V GD+ N T I LIPK HP
Sbjct: 454 LHALFFQKFWHILGSDVISFVQSWWRGMGDLGVVNKTCIVLIPKCDHP 501
>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1747
Score = 57.0 bits (136), Expect(3) = 4e-16
Identities = 23/43 (53%), Positives = 34/43 (79%)
Frame = -3
Query: 276 IKDYRPIGLCNVIYKLISKTIVNTLKSHMPSIINDSQSAFVEK 148
+ +YRPI LCNV+YKL+SK + N LKS +P +I ++QSAF+ +
Sbjct: 789 VTEYRPISLCNVVYKLVSKVLANRLKSVLPEVIAENQSAFMSQ 831
Score = 41.6 bits (96), Expect(3) = 4e-16
Identities = 16/44 (36%), Positives = 29/44 (65%)
Frame = -1
Query: 416 YLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKHP 285
+ K+W+++G+ V + L LN G ++ FN + I LIPK+++P
Sbjct: 743 FFQKFWNIIGNDVVDVCLRFLNGDGSIADFNHSLIALIPKVQNP 786
Score = 33.1 bits (74), Expect(3) = 4e-16
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = -2
Query: 61 AHKLDLSKAFDRVEWNFLE 5
A KLD++KA+DRVEW FL+
Sbjct: 860 ALKLDMTKAYDRVEWGFLQ 878
>gb|ABA97563.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 839
Score = 55.1 bits (131), Expect(3) = 5e-16
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = -3
Query: 276 IKDYRPIGLCNVIYKLISKTIVNTLKSHMPSIINDSQSAF 157
IKD RPI +CNV+YK++SK + N LK +P +I+ SQSAF
Sbjct: 379 IKDLRPISVCNVLYKIVSKVLANRLKKILPEVISQSQSAF 418
Score = 42.0 bits (97), Expect(3) = 5e-16
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = -1
Query: 428 LSSCYLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIK 291
+ + + +W ++G+K+T+ V ILN G +N+T I LIPK+K
Sbjct: 329 MPAVFYKNFWDLMGEKITSEVQEILNGGQIPQEWNETTIVLIPKVK 374
Score = 34.3 bits (77), Expect(3) = 5e-16
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = -2
Query: 148 RLITGIFIIAFEAFGSVXXXXXXXXXNHFAHKLDLSKAFDRVEWNFLE 5
RLI+ ++A+E + A KLD+SKA+DRVEW FL+
Sbjct: 422 RLISDNILVAYE-LTHYMRQKRNGETGYAALKLDMSKAYDRVEWGFLK 468
>gb|EPS72636.1| hypothetical protein M569_02121, partial [Genlisea aurea]
Length = 1503
Score = 50.1 bits (118), Expect(3) = 9e-16
Identities = 24/43 (55%), Positives = 29/43 (67%)
Frame = -3
Query: 282 IYIKDYRPIGLCNVIYKLISKTIVNTLKSHMPSIINDSQSAFV 154
+ + YRPI LCNVIYK+ SK I N LK + II+ QSAFV
Sbjct: 838 VEVAHYRPISLCNVIYKMASKCITNRLKEFVSEIISPWQSAFV 880
Score = 43.1 bits (100), Expect(3) = 9e-16
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -1
Query: 416 YLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKHPIYI 276
+ K+W +G +V N+VL LN+ FN TNI IPK+ P+ +
Sbjct: 794 FYQKFWPTIGSEVCNSVLDFLNNRKCFRKFNHTNIVFIPKVSDPVEV 840
Score = 37.4 bits (85), Expect(3) = 9e-16
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = -2
Query: 148 RLITGIFIIAFEAFGSVXXXXXXXXXNHFAHKLDLSKAFDRVEWNFLES 2
RLIT ++AFE S+ + KLD++KA+DRVEW+FL++
Sbjct: 883 RLITDNILVAFEVNHSIRNLRRGKKSF-VSLKLDMNKAYDRVEWSFLKA 930
>ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa
Japonica Group]
Length = 1453
Score = 52.0 bits (123), Expect(3) = 9e-16
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = -3
Query: 276 IKDYRPIGLCNVIYKLISKTIVNTLKSHMPSIINDSQSAFV 154
IKD RPI L NV+YK++SK + N +K +P +I+ SQSAFV
Sbjct: 750 IKDLRPISLRNVLYKIVSKVLANRVKKVLPDVISQSQSAFV 790
Score = 45.1 bits (105), Expect(3) = 9e-16
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = -1
Query: 428 LSSCYLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKHPIYI--LRIIDL 258
+ + + +W ++G KVT+ VL ILN G +N+T I LIPK+K P I LR I L
Sbjct: 700 MPAVFYKNFWDVVGGKVTSEVLDILNGGQMPLGWNETTIVLIPKVKQPEQIKDLRPISL 758
Score = 33.5 bits (75), Expect(3) = 9e-16
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2
Query: 61 AHKLDLSKAFDRVEWNFL 8
A KLD+SKA+DRVEW FL
Sbjct: 821 ALKLDMSKAYDRVEWEFL 838
>gb|EEE67582.1| hypothetical protein OsJ_25113 [Oryza sativa Japonica Group]
Length = 915
Score = 52.0 bits (123), Expect(3) = 9e-16
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = -3
Query: 276 IKDYRPIGLCNVIYKLISKTIVNTLKSHMPSIINDSQSAFV 154
IKD RPI L NV+YK++SK + N +K +P +I+ SQSAFV
Sbjct: 713 IKDLRPISLRNVLYKIVSKVLANRVKKVLPDVISQSQSAFV 753
Score = 45.1 bits (105), Expect(3) = 9e-16
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = -1
Query: 428 LSSCYLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKHPIYI--LRIIDL 258
+ + + +W ++G KVT+ VL ILN G +N+T I LIPK+K P I LR I L
Sbjct: 663 MPAVFYKNFWDVVGGKVTSEVLDILNGGQMPLGWNETTIVLIPKVKQPEQIKDLRPISL 721
Score = 33.5 bits (75), Expect(3) = 9e-16
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2
Query: 61 AHKLDLSKAFDRVEWNFL 8
A KLD+SKA+DRVEW FL
Sbjct: 784 ALKLDMSKAYDRVEWEFL 801
>emb|CAB75484.1| putative protein [Arabidopsis thaliana]
Length = 851
Score = 62.4 bits (150), Expect(3) = 1e-15
Identities = 26/41 (63%), Positives = 36/41 (87%)
Frame = -3
Query: 276 IKDYRPIGLCNVIYKLISKTIVNTLKSHMPSIINDSQSAFV 154
+ DYRPI LCNV+YK+ISK +VN LK+H+ SI++DSQ+AF+
Sbjct: 122 LSDYRPIALCNVLYKVISKCMVNRLKAHLNSIVSDSQAAFI 162
Score = 34.7 bits (78), Expect(3) = 1e-15
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = -2
Query: 67 HFAHKLDLSKAFDRVEWNFLES 2
+ A K D+SKA+DRVEW+FLE+
Sbjct: 191 YMAVKTDVSKAYDRVEWDFLET 212
Score = 33.1 bits (74), Expect(3) = 1e-15
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -1
Query: 428 LSSCYLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKHP 285
L++ + + W ++G+ V V + N TNIC+IPKI++P
Sbjct: 72 LTARFYKQCWDIVGNDVIKEVKLFFESSHMKTSVNHTNICMIPKIQNP 119
>gb|ABA98898.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1188
Score = 53.9 bits (128), Expect(3) = 2e-15
Identities = 23/43 (53%), Positives = 34/43 (79%)
Frame = -3
Query: 282 IYIKDYRPIGLCNVIYKLISKTIVNTLKSHMPSIINDSQSAFV 154
I ++DYRPI LCNV+YK++SK +VN L+ + +I+ +QSAFV
Sbjct: 363 IELRDYRPISLCNVLYKVVSKCLVNRLRPILDELISPNQSAFV 405
Score = 43.9 bits (102), Expect(3) = 2e-15
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = -2
Query: 148 RLITGIFIIAFEAFGSVXXXXXXXXXNHFAHKLDLSKAFDRVEWNFLE 5
R+IT +IAFE F S+ A+KLDLSKA+DRV+W FLE
Sbjct: 408 RMITDNALIAFECFHSIQKNKKLSSAT-CAYKLDLSKAYDRVDWKFLE 454
Score = 31.6 bits (70), Expect(3) = 2e-15
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -1
Query: 416 YLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKHPI 282
+ + W +L ++V V N G + N+T I LIPK+ PI
Sbjct: 319 FFQRNWGLLKEEVVKAVKEFFNTGVMPAGVNETAIVLIPKVDQPI 363
>gb|EAZ20803.1| hypothetical protein OsJ_36426 [Oryza sativa Japonica Group]
Length = 787
Score = 53.9 bits (128), Expect(3) = 2e-15
Identities = 23/43 (53%), Positives = 34/43 (79%)
Frame = -3
Query: 282 IYIKDYRPIGLCNVIYKLISKTIVNTLKSHMPSIINDSQSAFV 154
I ++DYRPI LCNV+YK++SK +VN L+ + +I+ +QSAFV
Sbjct: 363 IELRDYRPISLCNVLYKVVSKCLVNRLRPILDELISPNQSAFV 405
Score = 43.9 bits (102), Expect(3) = 2e-15
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = -2
Query: 148 RLITGIFIIAFEAFGSVXXXXXXXXXNHFAHKLDLSKAFDRVEWNFLE 5
R+IT +IAFE F S+ A+KLDLSKA+DRV+W FLE
Sbjct: 408 RMITDNALIAFECFHSIQKNKKLSSAT-CAYKLDLSKAYDRVDWKFLE 454
Score = 31.6 bits (70), Expect(3) = 2e-15
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -1
Query: 416 YLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKHPI 282
+ + W +L ++V V N G + N+T I LIPK+ PI
Sbjct: 319 FFQRNWGLLKEEVVKAVKEFFNTGVMPAGVNETAIVLIPKVDQPI 363
>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1750
Score = 63.9 bits (154), Expect(3) = 5e-15
Identities = 27/41 (65%), Positives = 36/41 (87%)
Frame = -3
Query: 276 IKDYRPIGLCNVIYKLISKTIVNTLKSHMPSIINDSQSAFV 154
+ DYRPI LCNV+YK+ISK +VN LKSH+ SI++DSQ+AF+
Sbjct: 883 LSDYRPIALCNVLYKVISKCLVNRLKSHLNSIVSDSQAAFI 923
Score = 35.0 bits (79), Expect(3) = 5e-15
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = -2
Query: 148 RLITGIFIIAFEAFGSVXXXXXXXXXNHFAHKLDLSKAFDRVEWNFLES 2
R+I +IA E S+ + A K D+SKA+DRVEW+FLE+
Sbjct: 926 RIINDNVMIAHEVMHSLKVRKRVSKT-YMAVKTDVSKAYDRVEWDFLET 973
Score = 28.9 bits (63), Expect(3) = 5e-15
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -1
Query: 428 LSSCYLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKHP 285
L++ + W ++G V V N TNIC+IPKI +P
Sbjct: 833 LTARFYKNCWDIVGYDVILEVKKFFETSFMKPSINHTNICMIPKITNP 880
>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1524
Score = 63.9 bits (154), Expect(3) = 5e-15
Identities = 27/41 (65%), Positives = 36/41 (87%)
Frame = -3
Query: 276 IKDYRPIGLCNVIYKLISKTIVNTLKSHMPSIINDSQSAFV 154
+ DYRPI LCNV+YK+ISK +VN LKSH+ SI++DSQ+AF+
Sbjct: 657 LSDYRPIALCNVLYKVISKCLVNRLKSHLNSIVSDSQAAFI 697
Score = 35.0 bits (79), Expect(3) = 5e-15
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = -2
Query: 148 RLITGIFIIAFEAFGSVXXXXXXXXXNHFAHKLDLSKAFDRVEWNFLES 2
R+I +IA E S+ + A K D+SKA+DRVEW+FLE+
Sbjct: 700 RIINDNVMIAHEVMHSLKVRKRVSKT-YMAVKTDVSKAYDRVEWDFLET 747
Score = 28.9 bits (63), Expect(3) = 5e-15
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -1
Query: 428 LSSCYLDKYWSMLGDKVTNNVLGILNHGGDVSPFNDTNICLIPKIKHP 285
L++ + W ++G V V N TNIC+IPKI +P
Sbjct: 607 LTARFYKNCWDIVGYDVILEVKKFFETSFMKPSINHTNICMIPKITNP 654