BLASTX nr result
ID: Catharanthus22_contig00013855
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00013855
(241 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 121 1e-25
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 117 2e-24
gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa... 116 3e-24
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 115 5e-24
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 115 5e-24
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 115 5e-24
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 115 6e-24
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 114 1e-23
gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subc... 114 2e-23
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 114 2e-23
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 113 2e-23
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 113 2e-23
gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medic... 113 3e-23
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 113 3e-23
emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group] 113 3e-23
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 113 3e-23
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 112 7e-23
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote... 111 1e-22
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 111 1e-22
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 111 1e-22
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 121 bits (303), Expect = 1e-25
Identities = 54/80 (67%), Positives = 73/80 (91%)
Frame = +1
Query: 1 IDCKWIFKIKEPESANELPRFKTRLVAKGFSQVEGIDFNEIFSPVVKYKTIRIMLAIVAF 180
+DCKW+FKIK+ S +E P++K+RLVAKGFSQ EGID+NE+FSPVVK+K+IR++LA+V+
Sbjct: 958 VDCKWLFKIKDGISXDEPPKYKSRLVAKGFSQKEGIDYNEVFSPVVKHKSIRVLLAMVSV 1017
Query: 181 YDLDLEQLDVKTAFLHGELE 240
++L+L+QLDVKTAFLHG LE
Sbjct: 1018 FNLELDQLDVKTAFLHGNLE 1037
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 117 bits (293), Expect = 2e-24
Identities = 55/80 (68%), Positives = 67/80 (83%)
Frame = +1
Query: 1 IDCKWIFKIKEPESANELPRFKTRLVAKGFSQVEGIDFNEIFSPVVKYKTIRIMLAIVAF 180
+ CKWIFK KE S +E PRFK RLVAKGFSQ+ G+D+N++FSPVVK+ +IR +IVA
Sbjct: 850 VRCKWIFKRKEGLSPSEPPRFKARLVAKGFSQIVGVDYNDVFSPVVKHSSIRTFFSIVAM 909
Query: 181 YDLDLEQLDVKTAFLHGELE 240
+DL+LEQLDVKTAFLHGELE
Sbjct: 910 HDLELEQLDVKTAFLHGELE 929
>gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa Japonica Group]
gi|18542925|gb|AAL75759.1| Putative pol polyprotein
[Oryza sativa Japonica Group] gi|31429763|gb|AAP51772.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1005
Score = 116 bits (291), Expect = 3e-24
Identities = 54/80 (67%), Positives = 67/80 (83%)
Frame = +1
Query: 1 IDCKWIFKIKEPESANELPRFKTRLVAKGFSQVEGIDFNEIFSPVVKYKTIRIMLAIVAF 180
+ CKWIFK KE S +E PRFK +LVAKGFSQ+ G+D+N++FSPVVK+ +IR +IVA
Sbjct: 534 VRCKWIFKRKEGLSPSEPPRFKAKLVAKGFSQIAGVDYNDVFSPVVKHSSIRTFFSIVAM 593
Query: 181 YDLDLEQLDVKTAFLHGELE 240
+DL+LEQLDVKTAFLHGELE
Sbjct: 594 HDLELEQLDVKTAFLHGELE 613
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 115 bits (289), Expect = 5e-24
Identities = 53/80 (66%), Positives = 69/80 (86%)
Frame = +1
Query: 1 IDCKWIFKIKEPESANELPRFKTRLVAKGFSQVEGIDFNEIFSPVVKYKTIRIMLAIVAF 180
I CKWIFK KE S++E P++K RLVA+G+SQ+ G+D+N++FSPVVK+ +IR L+IVA
Sbjct: 861 ISCKWIFKRKEGLSSSEPPKYKARLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVAS 920
Query: 181 YDLDLEQLDVKTAFLHGELE 240
+DL+LEQLDVKTAFLHGELE
Sbjct: 921 HDLELEQLDVKTAFLHGELE 940
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 115 bits (289), Expect = 5e-24
Identities = 53/80 (66%), Positives = 69/80 (86%)
Frame = +1
Query: 1 IDCKWIFKIKEPESANELPRFKTRLVAKGFSQVEGIDFNEIFSPVVKYKTIRIMLAIVAF 180
I CKWIFK KE S++E P++K RLVA+G+SQ+ G+D+N++FSPVVK+ +IR L+IVA
Sbjct: 861 ISCKWIFKRKEGLSSSEPPKYKARLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVAS 920
Query: 181 YDLDLEQLDVKTAFLHGELE 240
+DL+LEQLDVKTAFLHGELE
Sbjct: 921 HDLELEQLDVKTAFLHGELE 940
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 115 bits (289), Expect = 5e-24
Identities = 53/80 (66%), Positives = 69/80 (86%)
Frame = +1
Query: 1 IDCKWIFKIKEPESANELPRFKTRLVAKGFSQVEGIDFNEIFSPVVKYKTIRIMLAIVAF 180
I CKWIFK KE S++E P++K RLVA+G+SQ+ G+D+N++FSPVVK+ +IR L+IVA
Sbjct: 861 ISCKWIFKRKEGLSSSEPPKYKARLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVAS 920
Query: 181 YDLDLEQLDVKTAFLHGELE 240
+DL+LEQLDVKTAFLHGELE
Sbjct: 921 HDLELEQLDVKTAFLHGELE 940
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 115 bits (288), Expect = 6e-24
Identities = 53/80 (66%), Positives = 68/80 (85%)
Frame = +1
Query: 1 IDCKWIFKIKEPESANELPRFKTRLVAKGFSQVEGIDFNEIFSPVVKYKTIRIMLAIVAF 180
I CKWIFK KE S +E P++K RLVA+G+SQ+ G+D+N++FSPVVK+ +IR L+IVA
Sbjct: 863 ISCKWIFKRKEALSLSEPPKYKARLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVAS 922
Query: 181 YDLDLEQLDVKTAFLHGELE 240
+DL+LEQLDVKTAFLHGELE
Sbjct: 923 HDLELEQLDVKTAFLHGELE 942
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 114 bits (286), Expect = 1e-23
Identities = 53/80 (66%), Positives = 65/80 (81%)
Frame = +1
Query: 1 IDCKWIFKIKEPESANELPRFKTRLVAKGFSQVEGIDFNEIFSPVVKYKTIRIMLAIVAF 180
+ CKWIFK KE S +E PRFK RLVAKGFSQ+ G+D+N++FSPVVK+ +IR +IV
Sbjct: 850 VRCKWIFKRKEGLSPSEPPRFKVRLVAKGFSQIAGVDYNDVFSPVVKHSSIRTFFSIVTM 909
Query: 181 YDLDLEQLDVKTAFLHGELE 240
+DL+LEQLDVKT FLHGELE
Sbjct: 910 HDLELEQLDVKTTFLHGELE 929
>gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1131
Score = 114 bits (284), Expect = 2e-23
Identities = 53/80 (66%), Positives = 65/80 (81%)
Frame = +1
Query: 1 IDCKWIFKIKEPESANELPRFKTRLVAKGFSQVEGIDFNEIFSPVVKYKTIRIMLAIVAF 180
+ CKWIFK KE S +E PRFK LVAKGFSQ+ G+D+N++FSPVVK+ +IR +IVA
Sbjct: 741 VRCKWIFKRKEGLSPSEPPRFKATLVAKGFSQIAGVDYNDVFSPVVKHSSIRTFFSIVAM 800
Query: 181 YDLDLEQLDVKTAFLHGELE 240
+DL+LEQLDVKT FLHGELE
Sbjct: 801 HDLELEQLDVKTTFLHGELE 820
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 114 bits (284), Expect = 2e-23
Identities = 53/80 (66%), Positives = 66/80 (82%)
Frame = +1
Query: 1 IDCKWIFKIKEPESANELPRFKTRLVAKGFSQVEGIDFNEIFSPVVKYKTIRIMLAIVAF 180
+ KW+FK K+ NE PR+K RLVAKGFSQ EG+D+NEIFSPVVK+ +IR++LA VA
Sbjct: 815 VGSKWVFKRKQGTLGNEAPRYKARLVAKGFSQKEGVDYNEIFSPVVKHSSIRLLLAFVAH 874
Query: 181 YDLDLEQLDVKTAFLHGELE 240
DL+L+QLDVKTAFLHGEL+
Sbjct: 875 EDLELDQLDVKTAFLHGELD 894
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 113 bits (283), Expect = 2e-23
Identities = 54/80 (67%), Positives = 67/80 (83%)
Frame = +1
Query: 1 IDCKWIFKIKEPESANELPRFKTRLVAKGFSQVEGIDFNEIFSPVVKYKTIRIMLAIVAF 180
I CKWIFK KE S ++ R+K RLVAKG+SQ+ GIDFN+IFSPVVK+ +IR +L+IVA
Sbjct: 618 IRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDIFSPVVKHSSIRTLLSIVAM 677
Query: 181 YDLDLEQLDVKTAFLHGELE 240
+D +LEQ+DVKTAFLHGELE
Sbjct: 678 HDYELEQMDVKTAFLHGELE 697
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 113 bits (283), Expect = 2e-23
Identities = 54/80 (67%), Positives = 67/80 (83%)
Frame = +1
Query: 1 IDCKWIFKIKEPESANELPRFKTRLVAKGFSQVEGIDFNEIFSPVVKYKTIRIMLAIVAF 180
I CKWIFK KE S ++ R+K RLVAKG+SQ+ GIDFN+IFSPVVK+ +IR +L+IVA
Sbjct: 786 IRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDIFSPVVKHSSIRTLLSIVAM 845
Query: 181 YDLDLEQLDVKTAFLHGELE 240
+D +LEQ+DVKTAFLHGELE
Sbjct: 846 HDYELEQMDVKTAFLHGELE 865
>gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medicago truncatula]
Length = 624
Score = 113 bits (282), Expect = 3e-23
Identities = 55/78 (70%), Positives = 64/78 (82%)
Frame = +1
Query: 7 CKWIFKIKEPESANELPRFKTRLVAKGFSQVEGIDFNEIFSPVVKYKTIRIMLAIVAFYD 186
CKWI+K KE E PR K RLV KGF+Q EGIDFNEIFSPVV++ +IR++LA VA +D
Sbjct: 211 CKWIYKKKEGIPGVENPRCKARLVVKGFNQKEGIDFNEIFSPVVRHTSIRVLLAFVALFD 270
Query: 187 LDLEQLDVKTAFLHGELE 240
L+LEQLDVKTAFLHGELE
Sbjct: 271 LELEQLDVKTAFLHGELE 288
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 113 bits (282), Expect = 3e-23
Identities = 52/80 (65%), Positives = 68/80 (85%)
Frame = +1
Query: 1 IDCKWIFKIKEPESANELPRFKTRLVAKGFSQVEGIDFNEIFSPVVKYKTIRIMLAIVAF 180
I CKWIFK KE S+++ R+K RL+AKG+SQ+ GIDFN++FSPVVK+ +IR +L+IVA
Sbjct: 1067 IRCKWIFKRKEGISSSDEARYKARLIAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAM 1126
Query: 181 YDLDLEQLDVKTAFLHGELE 240
+D +LEQ+DVKTAFLHGELE
Sbjct: 1127 HDYELEQMDVKTAFLHGELE 1146
>emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group]
Length = 576
Score = 113 bits (282), Expect = 3e-23
Identities = 53/80 (66%), Positives = 65/80 (81%)
Frame = +1
Query: 1 IDCKWIFKIKEPESANELPRFKTRLVAKGFSQVEGIDFNEIFSPVVKYKTIRIMLAIVAF 180
+ CKWIFK KE S +E PRFK RLVAKGFSQ+ G+D+N++FSPVVK+ +IR +IVA
Sbjct: 183 VHCKWIFKRKEGLSPSEPPRFKARLVAKGFSQIAGVDYNDVFSPVVKHSSIRTFFSIVAM 242
Query: 181 YDLDLEQLDVKTAFLHGELE 240
DL+L+QLDVKT FLHGELE
Sbjct: 243 DDLELKQLDVKTTFLHGELE 262
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 113 bits (282), Expect = 3e-23
Identities = 53/80 (66%), Positives = 67/80 (83%)
Frame = +1
Query: 1 IDCKWIFKIKEPESANELPRFKTRLVAKGFSQVEGIDFNEIFSPVVKYKTIRIMLAIVAF 180
I CKWIFK KE S ++ R+K RLVAKG+SQ+ GIDFN++FSPVVK+ +IR +L+IVA
Sbjct: 769 IRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAM 828
Query: 181 YDLDLEQLDVKTAFLHGELE 240
+D +LEQ+DVKTAFLHGELE
Sbjct: 829 HDYELEQMDVKTAFLHGELE 848
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 112 bits (279), Expect = 7e-23
Identities = 54/80 (67%), Positives = 66/80 (82%)
Frame = +1
Query: 1 IDCKWIFKIKEPESANELPRFKTRLVAKGFSQVEGIDFNEIFSPVVKYKTIRIMLAIVAF 180
I+CKWIFK E E P++K RLVA+GF+Q EG+DFNEIFSPVVK+ +IRI+LA+VA
Sbjct: 858 INCKWIFKRNEGIPDVEPPKYKARLVARGFTQREGVDFNEIFSPVVKHSSIRILLAMVAL 917
Query: 181 YDLDLEQLDVKTAFLHGELE 240
DL+LEQ+DVKTAFLHG LE
Sbjct: 918 LDLELEQMDVKTAFLHGNLE 937
>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
Group] gi|22655747|gb|AAN04164.1| Putative
retrotransposon protein [Oryza sativa Japonica Group]
gi|31431214|gb|AAP53029.1| retrotransposon protein,
putative, Ty1-copia subclass, expressed [Oryza sativa
Japonica Group]
Length = 1229
Score = 111 bits (277), Expect = 1e-22
Identities = 52/80 (65%), Positives = 63/80 (78%)
Frame = +1
Query: 1 IDCKWIFKIKEPESANELPRFKTRLVAKGFSQVEGIDFNEIFSPVVKYKTIRIMLAIVAF 180
+ CKWIFK KE S + PRF RLVAKGFSQ+ G+D+N++FSPVVK+ +IR IVA
Sbjct: 796 VHCKWIFKRKEGLSPSGPPRFNARLVAKGFSQIAGVDYNDVFSPVVKHSSIRTFFCIVAM 855
Query: 181 YDLDLEQLDVKTAFLHGELE 240
+DL+LEQLDVKT FLHGELE
Sbjct: 856 HDLELEQLDVKTIFLHGELE 875
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 111 bits (277), Expect = 1e-22
Identities = 51/80 (63%), Positives = 66/80 (82%)
Frame = +1
Query: 1 IDCKWIFKIKEPESANELPRFKTRLVAKGFSQVEGIDFNEIFSPVVKYKTIRIMLAIVAF 180
I CKWIFK KE S ++ R+K RLVAKG+SQ+ GIDFN++FSP++K+ +IR +L IVA
Sbjct: 895 IRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPIMKHSSIRTLLGIVAM 954
Query: 181 YDLDLEQLDVKTAFLHGELE 240
+D +LEQ+DVKTAFLHGELE
Sbjct: 955 HDYELEQMDVKTAFLHGELE 974
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 111 bits (277), Expect = 1e-22
Identities = 51/80 (63%), Positives = 66/80 (82%)
Frame = +1
Query: 1 IDCKWIFKIKEPESANELPRFKTRLVAKGFSQVEGIDFNEIFSPVVKYKTIRIMLAIVAF 180
I CKWIFK KE S ++ R+K RLVAKG+SQ+ GIDFN++FSP++K+ +IR +L IVA
Sbjct: 895 IRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPIMKHSSIRTLLGIVAM 954
Query: 181 YDLDLEQLDVKTAFLHGELE 240
+D +LEQ+DVKTAFLHGELE
Sbjct: 955 HDYELEQMDVKTAFLHGELE 974