BLASTX nr result

ID: Catharanthus22_contig00013752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00013752
         (261 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004494063.1| PREDICTED: ABC transporter B family member 1...    60   4e-07
ref|XP_002519488.1| multidrug resistance protein 1, 2, putative ...    57   2e-06
gb|EOY07922.1| ATP binding cassette subfamily B1 isoform 2 [Theo...    56   4e-06
gb|EOY07921.1| ATP binding cassette subfamily B1 isoform 1 [Theo...    56   4e-06
ref|XP_003625677.1| ABC transporter-like protein, partial [Medic...    55   8e-06

>ref|XP_004494063.1| PREDICTED: ABC transporter B family member 1-like, partial [Cicer
           arietinum]
          Length = 1283

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 31/48 (64%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
 Frame = +3

Query: 72  MSQDCEEIKTIEQWKWSEMQGLELVVSVQSDDLEQ-ENSSSSFKANQP 212
           MS++ EEIKTIEQWKWSEMQGLELV   + DD++   N+S SFK N P
Sbjct: 1   MSKESEEIKTIEQWKWSEMQGLELV--GRDDDVDNTHNNSESFKGNLP 46


>ref|XP_002519488.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
           gi|223541351|gb|EEF42902.1| multidrug resistance protein
           1, 2, putative [Ricinus communis]
          Length = 1352

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/45 (66%), Positives = 33/45 (73%)
 Frame = +3

Query: 72  MSQDCEEIKTIEQWKWSEMQGLELVVSVQSDDLEQENSSSSFKAN 206
           MSQ+ EEIKTIEQWKWSEMQGLELV S  S+     +SS  FK N
Sbjct: 1   MSQESEEIKTIEQWKWSEMQGLELVSSAPSN----PSSSDPFKTN 41


>gb|EOY07922.1| ATP binding cassette subfamily B1 isoform 2 [Theobroma cacao]
          Length = 1365

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 27/39 (69%), Positives = 30/39 (76%)
 Frame = +3

Query: 72  MSQDCEEIKTIEQWKWSEMQGLELVVSVQSDDLEQENSS 188
           MSQD EEIKTIEQWKWSEMQGLELV +  SD  +   S+
Sbjct: 1   MSQDSEEIKTIEQWKWSEMQGLELVSAPPSDPFKTNPST 39


>gb|EOY07921.1| ATP binding cassette subfamily B1 isoform 1 [Theobroma cacao]
          Length = 1373

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 27/39 (69%), Positives = 30/39 (76%)
 Frame = +3

Query: 72  MSQDCEEIKTIEQWKWSEMQGLELVVSVQSDDLEQENSS 188
           MSQD EEIKTIEQWKWSEMQGLELV +  SD  +   S+
Sbjct: 1   MSQDSEEIKTIEQWKWSEMQGLELVSAPPSDPFKTNPST 39


>ref|XP_003625677.1| ABC transporter-like protein, partial [Medicago truncatula]
           gi|355500692|gb|AES81895.1| ABC transporter-like
           protein, partial [Medicago truncatula]
          Length = 658

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 30/47 (63%), Positives = 33/47 (70%)
 Frame = +3

Query: 72  MSQDCEEIKTIEQWKWSEMQGLELVVSVQSDDLEQENSSSSFKANQP 212
           MS++ EEIKT EQWKWSEMQGLELV    SDD    +SS  FK N P
Sbjct: 1   MSKESEEIKTTEQWKWSEMQGLELV----SDD-NNSSSSDPFKGNLP 42


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