BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00013579
         (1298 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001275155.1| single-stranded DNA-binding protein WHY1, ch...   354   5e-95
ref|XP_004238773.1| PREDICTED: single-stranded DNA-bindig protei...   346   1e-92
ref|XP_002277278.1| PREDICTED: uncharacterized protein LOC100253...   345   3e-92
pdb|1L3A|A Chain A, Structure Of The Plant Transcriptional Regul...   342   3e-91
gb|EOY02045.1| SsDNA-binding transcriptional regulator isoform 1...   338   3e-90
ref|XP_002520128.1| conserved hypothetical protein [Ricinus comm...   334   4e-89
ref|XP_004297331.1| PREDICTED: single-stranded DNA-binding prote...   330   8e-88
ref|XP_006303274.1| hypothetical protein CARUB_v10010024mg [Caps...   329   1e-87
gb|EMJ23674.1| hypothetical protein PRUPE_ppa009776mg [Prunus pe...   328   3e-87
ref|NP_001077872.1| single-stranded DNA-binding protein WHY3 [Ar...   328   3e-87
ref|XP_006291681.1| hypothetical protein CARUB_v10017841mg [Caps...   327   5e-87
gb|ADL36850.1| WHY domain class transcription factor [Malus dome...   327   5e-87
gb|ESW25829.1| hypothetical protein PHAVU_003G068800g [Phaseolus...   326   1e-86
ref|XP_002892804.1| ATWHY1/PTAC1 [Arabidopsis lyrata subsp. lyra...   326   1e-86
ref|XP_006483225.1| PREDICTED: single-stranded DNA-binding prote...   325   2e-86
ref|XP_006438627.1| hypothetical protein CICLE_v10032427mg [Citr...   325   2e-86
ref|NP_178377.2| single-stranded DNA-binding protein WHY3 [Arabi...   325   3e-86
gb|ESW25830.1| hypothetical protein PHAVU_003G068800g [Phaseolus...   325   3e-86
ref|XP_002311601.1| hypothetical protein POPTR_0008s14840g [Popu...   323   1e-85
ref|NP_172893.1| single-stranded DNA-binding protein WHY1 [Arabi...   323   1e-85

>ref|NP_001275155.1| single-stranded DNA-binding protein WHY1, chloroplastic [Solanum
            tuberosum] gi|75174555|sp|Q9LL85.1|WHY1_SOLTU RecName:
            Full=Single-stranded DNA-binding protein WHY1,
            chloroplastic; AltName: Full=DNA-binding protein p24;
            AltName: Full=PR-10a binding factor 2; Short=PBF-2;
            AltName: Full=Protein WHIRLY 1; Short=StWhy1; Flags:
            Precursor gi|9651810|gb|AAF91282.1|AF233342_1 DNA-binding
            protein p24 [Solanum tuberosum]
          Length = 274

 Score =  354 bits (908), Expect = 5e-95
 Identities = 184/282 (65%), Positives = 209/282 (74%), Gaps = 5/282 (1%)
 Frame = -2

Query: 1198 MLNLSLASSSMG--RLTIQNPNKQDLHQFHFQL---FPTFLFDTTNXXXXXXXXXXXXXX 1034
            M N SL+ S      L +QNP K     F   +   F     +TT               
Sbjct: 1    MSNFSLSPSPTSGFSLNLQNPTKTSYLSFSSSINTIFAPLSSNTTKSFSGLTHKAALPRN 60

Query: 1033 XXXKCRHSDYFEAXXXXXXQRFSPNDSSFSSQQGTSPPRVFVGYSIYKGKAALTVEPRPP 854
                CRHSDYFE       Q+  P        QG S P+VFVGYSIYKGKAALTVEPR P
Sbjct: 61   LSLTCRHSDYFEPQQQQQQQQQQP--------QGASTPKVFVGYSIYKGKAALTVEPRSP 112

Query: 853  EFTPLDSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEF 674
            EF+PLDSGAFKLS+EG V+LQFAPAAGVRQYDWSRKQVFSLSVTE+G++ISLG KDSCEF
Sbjct: 113  EFSPLDSGAFKLSREGMVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSIISLGAKDSCEF 172

Query: 673  FHDPFKGKSDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNS 494
            FHDP KG+SDEGRVRKVLK+EPLPDGSGHFFNLSVQNKL+NLDENIYIPVTKAEFAVL S
Sbjct: 173  FHDPNKGRSDEGRVRKVLKVEPLPDGSGHFFNLSVQNKLINLDENIYIPVTKAEFAVLVS 232

Query: 493  AFNYVLPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 368
            AFN+V+PYLLGW+T  +S KPED++R+N+ANPRSGA+LEW+R
Sbjct: 233  AFNFVMPYLLGWHTAVNSFKPEDASRSNNANPRSGAELEWNR 274


>ref|XP_004238773.1| PREDICTED: single-stranded DNA-bindig protein WHY1,
            chloroplastic-like [Solanum lycopersicum]
          Length = 268

 Score =  346 bits (887), Expect = 1e-92
 Identities = 168/218 (77%), Positives = 187/218 (85%)
 Frame = -2

Query: 1021 CRHSDYFEAXXXXXXQRFSPNDSSFSSQQGTSPPRVFVGYSIYKGKAALTVEPRPPEFTP 842
            CRHSDYFE                    QG S P+VFVGYSIYKGKAALTVEPR PEF+P
Sbjct: 63   CRHSDYFEP------------QQQQQQLQGASTPKVFVGYSIYKGKAALTVEPRSPEFSP 110

Query: 841  LDSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFFHDP 662
            LDSGAFKLSKEG V+LQFAPAAGVRQYDWSRKQVFSLSVTE+G++ISLG KDSCEFFHDP
Sbjct: 111  LDSGAFKLSKEGMVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSIISLGAKDSCEFFHDP 170

Query: 661  FKGKSDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSAFNY 482
             KG+SDEGRVRKVLK+EPLPDGSGHFFNLSVQNKL+NLDENIYIPVTKAEFAVL SAFN+
Sbjct: 171  NKGRSDEGRVRKVLKVEPLPDGSGHFFNLSVQNKLINLDENIYIPVTKAEFAVLVSAFNF 230

Query: 481  VLPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 368
            V+PYLLGW+T  +S KPED++R+N+ NPRSGA+LEW+R
Sbjct: 231  VMPYLLGWHTAVNSFKPEDASRSNNTNPRSGAELEWNR 268


>ref|XP_002277278.1| PREDICTED: uncharacterized protein LOC100253653 [Vitis vinifera]
            gi|296086421|emb|CBI32010.3| unnamed protein product
            [Vitis vinifera]
          Length = 268

 Score =  345 bits (884), Expect = 3e-92
 Identities = 181/277 (65%), Positives = 210/277 (75%)
 Frame = -2

Query: 1198 MLNLSLASSSMGRLTIQNPNKQDLHQFHFQLFPTFLFDTTNXXXXXXXXXXXXXXXXXKC 1019
            M +L L SSS    TIQNP     H        + L  T+                  +C
Sbjct: 1    MHHLHLLSSSF---TIQNPRLCPNHSLSSLHSSSPLSFTSRTPLLLSTTRHFRKKRSLQC 57

Query: 1018 RHSDYFEAXXXXXXQRFSPNDSSFSSQQGTSPPRVFVGYSIYKGKAALTVEPRPPEFTPL 839
            R SDYF+        R  PNDSSF    G   PRVFVG+SIYKGKAALTVEP+ PEFTPL
Sbjct: 58   RQSDYFQQQNITR--RQPPNDSSFG---GALQPRVFVGHSIYKGKAALTVEPKAPEFTPL 112

Query: 838  DSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFFHDPF 659
            DSGAFK+SKEGFVLLQFAPAAGVRQYDW RKQVFSLSVTE+G+LISLG ++SCEFFHDPF
Sbjct: 113  DSGAFKVSKEGFVLLQFAPAAGVRQYDWGRKQVFSLSVTEIGSLISLGARESCEFFHDPF 172

Query: 658  KGKSDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSAFNYV 479
            KG+S+EG+VRKVLK+EPLPDGSGHFFNLSVQNKL+N+DENIYIPVT+AEFAVL SAFN++
Sbjct: 173  KGRSEEGKVRKVLKVEPLPDGSGHFFNLSVQNKLLNMDENIYIPVTRAEFAVLISAFNFI 232

Query: 478  LPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 368
            +PYLLGW+ +A+SIKP+D++R N+ANPRSG D EWSR
Sbjct: 233  VPYLLGWHAYANSIKPDDTSRVNNANPRSG-DFEWSR 268


>pdb|1L3A|A Chain A, Structure Of The Plant Transcriptional Regulator Pbf-2
            gi|157878743|pdb|1L3A|B Chain B, Structure Of The Plant
            Transcriptional Regulator Pbf-2 gi|157878744|pdb|1L3A|C
            Chain C, Structure Of The Plant Transcriptional Regulator
            Pbf-2 gi|157878745|pdb|1L3A|D Chain D, Structure Of The
            Plant Transcriptional Regulator Pbf-2
          Length = 227

 Score =  342 bits (876), Expect = 3e-91
 Identities = 168/216 (77%), Positives = 189/216 (87%)
 Frame = -2

Query: 1018 RHSDYFEAXXXXXXQRFSPNDSSFSSQQGTSPPRVFVGYSIYKGKAALTVEPRPPEFTPL 839
            R SDYFE       Q+  P        QG S P+VFVGYSIYKGKAALTVEPR PEF+PL
Sbjct: 12   RGSDYFEPQQQQQQQQQQP--------QGASTPKVFVGYSIYKGKAALTVEPRSPEFSPL 63

Query: 838  DSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFFHDPF 659
            DSGAFKLS+EG V+LQFAPAAGVRQYDWSRKQVFSLSVTE+G++ISLGTKDSCEFFHDP 
Sbjct: 64   DSGAFKLSREGMVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSIISLGTKDSCEFFHDPN 123

Query: 658  KGKSDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSAFNYV 479
            KG+SDEGRVRKVLK+EPLPDGSGHFFNLSVQNKL+NLDENIYIPVTKAEFAVL SAFN+V
Sbjct: 124  KGRSDEGRVRKVLKVEPLPDGSGHFFNLSVQNKLINLDENIYIPVTKAEFAVLVSAFNFV 183

Query: 478  LPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWS 371
            +PYLLGW+T  +S KPED++R+N+ANPRSGA+LEW+
Sbjct: 184  MPYLLGWHTAVNSFKPEDASRSNNANPRSGAELEWN 219


>gb|EOY02045.1| SsDNA-binding transcriptional regulator isoform 1 [Theobroma cacao]
          Length = 270

 Score =  338 bits (867), Expect = 3e-90
 Identities = 160/218 (73%), Positives = 188/218 (86%)
 Frame = -2

Query: 1021 CRHSDYFEAXXXXXXQRFSPNDSSFSSQQGTSPPRVFVGYSIYKGKAALTVEPRPPEFTP 842
            CR S+YF+        RFS + S+ S      PPR +VG+S+YKGKAALTVEPR PEF P
Sbjct: 58   CRQSEYFDQQQ-----RFSNSSSTASPPASGLPPRFYVGHSVYKGKAALTVEPRAPEFVP 112

Query: 841  LDSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFFHDP 662
            LDSGAFK+S+EGFVLLQFAPAAGVRQYDWSRKQVFSLSVTE+G LISLG ++SCEFFHDP
Sbjct: 113  LDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGALISLGARESCEFFHDP 172

Query: 661  FKGKSDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSAFNY 482
            FKGKS+EG+VRKVLK+EPLPDGSGHFFNL VQN+L+NLDENIYIP+T+AEF VLNSAF++
Sbjct: 173  FKGKSEEGKVRKVLKVEPLPDGSGHFFNLGVQNRLLNLDENIYIPITRAEFTVLNSAFSF 232

Query: 481  VLPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 368
            +LPYLLGW+ FA+SIKPE+++R N+ANPR G D EWSR
Sbjct: 233  ILPYLLGWHAFANSIKPEEASRVNNANPRYGGDYEWSR 270


>ref|XP_002520128.1| conserved hypothetical protein [Ricinus communis]
            gi|223540620|gb|EEF42183.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 271

 Score =  334 bits (857), Expect = 4e-89
 Identities = 162/219 (73%), Positives = 188/219 (85%), Gaps = 1/219 (0%)
 Frame = -2

Query: 1021 CRHSDYFEAXXXXXXQ-RFSPNDSSFSSQQGTSPPRVFVGYSIYKGKAALTVEPRPPEFT 845
            CR S++++         R S NDSSF+SQ   + PRV+VG+SIYKGKAALTVEPR PEF 
Sbjct: 53   CRQSEFYDQQQQKYNPSRPSSNDSSFASQSPAAVPRVYVGHSIYKGKAALTVEPRAPEFA 112

Query: 844  PLDSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFFHD 665
             LDSGAFK+++EGFVLLQFAPAAGVRQYDWSRKQVFSLSVTE+G +ISLG +DSCEFFHD
Sbjct: 113  ALDSGAFKVAREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTIISLGARDSCEFFHD 172

Query: 664  PFKGKSDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSAFN 485
            P KGKSDEG++RKVLK+EPLPDGSGHFFNLSVQNK +N+DE+IYIPVTKAEFAVL SAFN
Sbjct: 173  PNKGKSDEGKIRKVLKVEPLPDGSGHFFNLSVQNKPMNMDESIYIPVTKAEFAVLISAFN 232

Query: 484  YVLPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 368
            Y+LPYLLGW+TFA+SIKP+ +   N+ANPR G D EWSR
Sbjct: 233  YILPYLLGWHTFANSIKPDLNGHMNNANPRFGGDYEWSR 271


>ref|XP_004297331.1| PREDICTED: single-stranded DNA-binding protein WHY1,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 270

 Score =  330 bits (846), Expect = 8e-88
 Identities = 169/276 (61%), Positives = 199/276 (72%), Gaps = 2/276 (0%)
 Frame = -2

Query: 1189 LSLASSSMGRLTIQNPNKQDLHQFHFQLFPTFLFDTTNXXXXXXXXXXXXXXXXXKCRHS 1010
            L L  S    + +QNPN       H       +F T +                 KCR S
Sbjct: 2    LKLECSLSSPVAVQNPN-------HSVSSKARVFSTNSFGFAPNSTSFRKRRLALKCRQS 54

Query: 1009 DYFEAXXXXXXQRFSPNDSSFSSQQGTS--PPRVFVGYSIYKGKAALTVEPRPPEFTPLD 836
            +YF+          S   S+  S  G S  P R +VG+SIYKGKAALTVEP+ PEFT LD
Sbjct: 55   EYFDQQRLTAPNPPSTAASAPQSPAGASAGPARFYVGHSIYKGKAALTVEPKAPEFTALD 114

Query: 835  SGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFFHDPFK 656
            SGAFK+S+EGFVLLQFAPAAGVR YDWSRKQVFSLSVTE+G+++SLG K+SCEFFHDPFK
Sbjct: 115  SGAFKMSREGFVLLQFAPAAGVRVYDWSRKQVFSLSVTEIGSIVSLGAKESCEFFHDPFK 174

Query: 655  GKSDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSAFNYVL 476
            GKS+EG+VRKVLK+EPLPDGSG FFNLSVQNKL+NLDENIYIPVT+AEFAVLNSAFNY+L
Sbjct: 175  GKSEEGKVRKVLKVEPLPDGSGRFFNLSVQNKLINLDENIYIPVTRAEFAVLNSAFNYLL 234

Query: 475  PYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 368
            PYL+GW+ + +S+KPED +R N+A PR G D EWSR
Sbjct: 235  PYLIGWHAYVNSVKPEDMSRVNNATPRYGGDFEWSR 270


>ref|XP_006303274.1| hypothetical protein CARUB_v10010024mg [Capsella rubella]
            gi|482571985|gb|EOA36172.1| hypothetical protein
            CARUB_v10010024mg [Capsella rubella]
          Length = 266

 Score =  329 bits (844), Expect = 1e-87
 Identities = 162/220 (73%), Positives = 188/220 (85%), Gaps = 3/220 (1%)
 Frame = -2

Query: 1018 RHSDYFEAXXXXXXQRFSPNDSS--FSSQQGT-SPPRVFVGYSIYKGKAALTVEPRPPEF 848
            R +DYFE        RF  + SS  +SSQ    SP R +VG+SIYKGKAALTVEPR PEF
Sbjct: 53   RQTDYFEKQ------RFGDSSSSPSYSSQNAEGSPARFYVGHSIYKGKAALTVEPRAPEF 106

Query: 847  TPLDSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFFH 668
              LDSGAFKLSK+GF+LLQFAP+AGVRQYDWS+KQVFSLSVTE+G L+SLG K+SCEFFH
Sbjct: 107  VALDSGAFKLSKDGFLLLQFAPSAGVRQYDWSKKQVFSLSVTEIGTLVSLGPKESCEFFH 166

Query: 667  DPFKGKSDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSAF 488
            DPFKGKSDEG+VRKVLK+EPLPDGSGHFFNLSVQNKL+N+D+NIYIP+T+AEFAVL SAF
Sbjct: 167  DPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLLNVDDNIYIPITRAEFAVLISAF 226

Query: 487  NYVLPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 368
            N+VLPYL+GW+ FA+SIKPEDSNR N+A+P  G D EW+R
Sbjct: 227  NFVLPYLIGWHAFANSIKPEDSNRMNNASPNYGGDYEWNR 266


>gb|EMJ23674.1| hypothetical protein PRUPE_ppa009776mg [Prunus persica]
          Length = 278

 Score =  328 bits (841), Expect = 3e-87
 Identities = 171/279 (61%), Positives = 204/279 (73%), Gaps = 5/279 (1%)
 Frame = -2

Query: 1189 LSLASSSMGRLTIQNPNKQDLHQFHFQLFPTFLFDTTNXXXXXXXXXXXXXXXXXKCRHS 1010
            L L S S   +  QNPN+        +L       +TN                 KCR S
Sbjct: 2    LRLHSLSSPAVAAQNPNQNPKQCLASELSSRARVFSTNSFGFAPSLSSSRKRLSLKCRQS 61

Query: 1009 DYFEAXXXXXXQRFSPNDSSFSSQQ----GTS-PPRVFVGYSIYKGKAALTVEPRPPEFT 845
            +YF+          +PN  S  + Q    GT  PPR FVG+SIYKGKAALTVEP+ PEFT
Sbjct: 62   EYFDQQRASTAS--APNKPSPPAPQTPAGGTGLPPRFFVGHSIYKGKAALTVEPKAPEFT 119

Query: 844  PLDSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFFHD 665
             LDSGAFKLS+EGFVLLQFAPAAGVR YDWSRKQVFSLSVTE+G+L+ LG+K+S EFFHD
Sbjct: 120  ALDSGAFKLSREGFVLLQFAPAAGVRVYDWSRKQVFSLSVTEIGSLVCLGSKESIEFFHD 179

Query: 664  PFKGKSDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSAFN 485
            PFKGKSDEG+VRKVLK+EPLPDGSGHFFNLSVQNKL+NLDE++YIP+T+AEFAVL SAFN
Sbjct: 180  PFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLINLDESVYIPITRAEFAVLKSAFN 239

Query: 484  YVLPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 368
            ++LPY+LGW+ +A+SIKPEDS+R N+++ R G D EWSR
Sbjct: 240  FILPYILGWHAYANSIKPEDSSRMNNSSSRYGGDFEWSR 278


>ref|NP_001077872.1| single-stranded DNA-binding protein WHY3 [Arabidopsis thaliana]
            gi|330250525|gb|AEC05619.1| single-stranded DNA-binding
            protein WHY3 [Arabidopsis thaliana]
          Length = 267

 Score =  328 bits (841), Expect = 3e-87
 Identities = 160/217 (73%), Positives = 185/217 (85%)
 Frame = -2

Query: 1018 RHSDYFEAXXXXXXQRFSPNDSSFSSQQGTSPPRVFVGYSIYKGKAALTVEPRPPEFTPL 839
            R SDYFE        RF   DSS S     S PR +VG+SIYKGKAALT+EPR PEF  L
Sbjct: 59   RQSDYFEKQ------RFG--DSSSSQNAEVSSPRFYVGHSIYKGKAALTIEPRAPEFVAL 110

Query: 838  DSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFFHDPF 659
            +SGAFKL+KEGF+LLQFAPAAGVRQYDWSRKQVFSLSVTE+GNL+SLG ++SCEFFHDPF
Sbjct: 111  ESGAFKLTKEGFLLLQFAPAAGVRQYDWSRKQVFSLSVTEIGNLVSLGPRESCEFFHDPF 170

Query: 658  KGKSDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSAFNYV 479
            KGK DEG+VRKVLK+EPLPDGSG FFNLSVQNKL+N+DE++YIP+TKAEFAVL SAFN+V
Sbjct: 171  KGKGDEGKVRKVLKVEPLPDGSGRFFNLSVQNKLLNVDESVYIPITKAEFAVLISAFNFV 230

Query: 478  LPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 368
            LP+L+GW+ FA+SIKPEDSNR N+A+P+ G D EWSR
Sbjct: 231  LPHLIGWSAFANSIKPEDSNRLNNASPKYGGDYEWSR 267


>ref|XP_006291681.1| hypothetical protein CARUB_v10017841mg [Capsella rubella]
            gi|482560388|gb|EOA24579.1| hypothetical protein
            CARUB_v10017841mg [Capsella rubella]
          Length = 269

 Score =  327 bits (839), Expect = 5e-87
 Identities = 161/218 (73%), Positives = 188/218 (86%), Gaps = 1/218 (0%)
 Frame = -2

Query: 1018 RHSDYFEAXXXXXXQRFSPNDSSFSSQQGTSPPRVFVGYSIYKGKAALTVEPRPPEFTPL 839
            R  DYFE        RF  + S   + +G+SP R +VG+SIYKGKAALTVEPR PEF  L
Sbjct: 59   RQGDYFEKQ------RFGDSSSPPQNTEGSSP-RFYVGHSIYKGKAALTVEPRAPEFVAL 111

Query: 838  DSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFFHDPF 659
            +SGAFKL+KEGF+LLQFAPAAGVRQYDWSRKQVFSLSVTE+GNLISLG ++SCEFFHDPF
Sbjct: 112  ESGAFKLTKEGFLLLQFAPAAGVRQYDWSRKQVFSLSVTEIGNLISLGPRESCEFFHDPF 171

Query: 658  KGK-SDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSAFNY 482
            KGK SDEG+VRKVLK+EPLPDGSG FFNLSVQN+L+N+DEN+YIP+TKAEFAVL SAFN+
Sbjct: 172  KGKGSDEGKVRKVLKVEPLPDGSGRFFNLSVQNRLLNVDENVYIPITKAEFAVLISAFNF 231

Query: 481  VLPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 368
            +LP+L+GWNTFA+SIKPEDSNR N+A+P+ G D EWSR
Sbjct: 232  ILPHLIGWNTFATSIKPEDSNRLNNASPKYGGDYEWSR 269


>gb|ADL36850.1| WHY domain class transcription factor [Malus domestica]
          Length = 276

 Score =  327 bits (839), Expect = 5e-87
 Identities = 172/281 (61%), Positives = 202/281 (71%), Gaps = 4/281 (1%)
 Frame = -2

Query: 1198 MLNLSLASSSMGRLTIQNPNKQDLHQFHFQLFPTFLFDTTNXXXXXXXXXXXXXXXXXKC 1019
            ML L L SS     T Q PN+        QL       +TN                 KC
Sbjct: 1    MLRLHLLSSPA---TAQKPNQNPSQFLSSQLLSRARVFSTNTFGFAPSPILSRKRLSLKC 57

Query: 1018 RHSDYFEAXXXXXXQRFSPNDSSFSSQQGTSP----PRVFVGYSIYKGKAALTVEPRPPE 851
            R S+YF+          SPN  S +           PR +VG+SIYKGKAALTVEP+ PE
Sbjct: 58   RQSEYFDQQRTSTAA--SPNKPSPAPPTPAGATGMAPRFYVGHSIYKGKAALTVEPKAPE 115

Query: 850  FTPLDSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFF 671
            FTPLDSGAFKLS+EGFVLLQFAPAAGVR YDWSRKQVFSLSVTE+G+L+SLG+K+S EFF
Sbjct: 116  FTPLDSGAFKLSREGFVLLQFAPAAGVRVYDWSRKQVFSLSVTEIGSLVSLGSKESLEFF 175

Query: 670  HDPFKGKSDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSA 491
            HDPFKGKSDEG+VRKVLK+EPLPDGSGHFFNLSVQNKL+NLDE+IYIP+T+AEFAVL SA
Sbjct: 176  HDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLINLDESIYIPITRAEFAVLKSA 235

Query: 490  FNYVLPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 368
            FN++LPY+LGW+ +A+SIKPEDS+R N++  + G D EWSR
Sbjct: 236  FNFILPYILGWHAYANSIKPEDSSRANNSGLKYGGDFEWSR 276


>gb|ESW25829.1| hypothetical protein PHAVU_003G068800g [Phaseolus vulgaris]
          Length = 264

 Score =  326 bits (835), Expect = 1e-86
 Identities = 156/218 (71%), Positives = 185/218 (84%)
 Frame = -2

Query: 1021 CRHSDYFEAXXXXXXQRFSPNDSSFSSQQGTSPPRVFVGYSIYKGKAALTVEPRPPEFTP 842
            CRHSD F+       QR +   +S ++     PPRV+VGYSIYKGKAALT+ PRPPEF P
Sbjct: 51   CRHSDLFDQNTLASSQRPTRPTASVAAL----PPRVYVGYSIYKGKAALTLTPRPPEFVP 106

Query: 841  LDSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFFHDP 662
            LDSGA+K+SKEG+VLLQFAPA G RQYDW+RKQVFSLSV EMG++ISLGT++S EFFHDP
Sbjct: 107  LDSGAYKISKEGYVLLQFAPAVGTRQYDWNRKQVFSLSVGEMGSVISLGTRESFEFFHDP 166

Query: 661  FKGKSDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSAFNY 482
            FKGKSDEG+VRK+LK+EPLPDGSGH FNLSVQNKLVN+DENIYIP+TKAE AVL S FN+
Sbjct: 167  FKGKSDEGKVRKILKLEPLPDGSGHLFNLSVQNKLVNVDENIYIPITKAELAVLTSTFNF 226

Query: 481  VLPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 368
            ++PYLLGW+TFA+SIKPED++  N+ANPR G D EW+R
Sbjct: 227  IMPYLLGWHTFANSIKPEDTSGGNNANPRYGGDYEWNR 264


>ref|XP_002892804.1| ATWHY1/PTAC1 [Arabidopsis lyrata subsp. lyrata]
            gi|297338646|gb|EFH69063.1| ATWHY1/PTAC1 [Arabidopsis
            lyrata subsp. lyrata]
          Length = 264

 Score =  326 bits (835), Expect = 1e-86
 Identities = 157/217 (72%), Positives = 183/217 (84%)
 Frame = -2

Query: 1018 RHSDYFEAXXXXXXQRFSPNDSSFSSQQGTSPPRVFVGYSIYKGKAALTVEPRPPEFTPL 839
            R +DYFE        RF  + SS S      P R +VG+SIYKGKAALT+EPR PEF  L
Sbjct: 54   RQTDYFEKQ------RFGDSSSSSSQNAEGLPARFYVGHSIYKGKAALTMEPRAPEFVAL 107

Query: 838  DSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFFHDPF 659
            DSGAFKLSK+GF+LLQFAP+AGVRQYDWS+KQVFSLSVTE+G L+SLG ++SCEFFHDPF
Sbjct: 108  DSGAFKLSKDGFLLLQFAPSAGVRQYDWSKKQVFSLSVTEIGTLVSLGPRESCEFFHDPF 167

Query: 658  KGKSDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSAFNYV 479
            KGKSDEG+VRKVLK+EPLPDGSGHFFNLSVQNKLVN+DE+IYIP+T+AEFAVL SAFN+V
Sbjct: 168  KGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLVNVDESIYIPITRAEFAVLISAFNFV 227

Query: 478  LPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 368
            LPYL+GW+ FA+SIKPED+NR N+A P  G D EW+R
Sbjct: 228  LPYLIGWHAFANSIKPEDTNRANNAPPNYGGDYEWNR 264


>ref|XP_006483225.1| PREDICTED: single-stranded DNA-binding protein WHY1,
            chloroplastic-like [Citrus sinensis]
          Length = 267

 Score =  325 bits (834), Expect = 2e-86
 Identities = 156/221 (70%), Positives = 189/221 (85%), Gaps = 3/221 (1%)
 Frame = -2

Query: 1021 CRHSDYFEAXXXXXXQRFSPNDSSFSSQQ---GTSPPRVFVGYSIYKGKAALTVEPRPPE 851
            CR S+Y+E          SP++SS++      GT P RV+VG+SIYKGKAALTVEPR PE
Sbjct: 51   CRQSEYYEQKSFSA----SPSNSSYAPTDVAVGTLPTRVYVGHSIYKGKAALTVEPRGPE 106

Query: 850  FTPLDSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFF 671
            F  LDSGA KLS+EGFV+LQFAPAAGVRQYDWSRKQVFSLSVTE+G+L++LG ++SCEFF
Sbjct: 107  FVSLDSGAVKLSREGFVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSLVALGARESCEFF 166

Query: 670  HDPFKGKSDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSA 491
            HDPFKGKS+EG+VRKVLK+EPLPDGSGHFFNLSVQNKL+NLDE+IYIPVT+AE+ VL SA
Sbjct: 167  HDPFKGKSEEGKVRKVLKVEPLPDGSGHFFNLSVQNKLINLDESIYIPVTRAEYTVLVSA 226

Query: 490  FNYVLPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 368
            FN++LPYLLGW+ +AS+I+ +D+ RTN+ANPR G D EW+R
Sbjct: 227  FNFILPYLLGWHAYASTIRADDTARTNNANPRYGGDYEWNR 267


>ref|XP_006438627.1| hypothetical protein CICLE_v10032427mg [Citrus clementina]
            gi|557540823|gb|ESR51867.1| hypothetical protein
            CICLE_v10032427mg [Citrus clementina]
          Length = 267

 Score =  325 bits (834), Expect = 2e-86
 Identities = 156/221 (70%), Positives = 189/221 (85%), Gaps = 3/221 (1%)
 Frame = -2

Query: 1021 CRHSDYFEAXXXXXXQRFSPNDSSFSSQQ---GTSPPRVFVGYSIYKGKAALTVEPRPPE 851
            CR S+Y+E          SP++SS++      GT P RV+VG+SIYKGKAALTVEPR PE
Sbjct: 51   CRQSEYYEQKSFSA----SPSNSSYAPTDVAVGTLPTRVYVGHSIYKGKAALTVEPRGPE 106

Query: 850  FTPLDSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFF 671
            F  LDSGA KLS+EGFV+LQFAPAAGVRQYDWSRKQVFSLSVTE+G+L++LG ++SCEFF
Sbjct: 107  FVSLDSGAVKLSREGFVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSLVALGARESCEFF 166

Query: 670  HDPFKGKSDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSA 491
            HDPFKGKS+EG+VRKVLK+EPLPDGSGHFFNLSVQNKL+NLDE+IYIPVT+AE+ VL SA
Sbjct: 167  HDPFKGKSEEGKVRKVLKVEPLPDGSGHFFNLSVQNKLINLDESIYIPVTRAEYTVLVSA 226

Query: 490  FNYVLPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 368
            FN++LPYLLGW+ +AS+I+ +D+ RTN+ANPR G D EW+R
Sbjct: 227  FNFILPYLLGWHAYASTIRADDTARTNNANPRYGGDYEWNR 267


>ref|NP_178377.2| single-stranded DNA-binding protein WHY3 [Arabidopsis thaliana]
            gi|75115367|sp|Q66GR6.1|WHY3_ARATH RecName:
            Full=Single-stranded DNA-binding protein WHY3,
            chloroplastic; AltName: Full=Protein PLASTID
            TRANSCRIPTIONALLY ACTIVE 11; AltName: Full=Protein WHIRLY
            3; Short=AtWHY3; Flags: Precursor
            gi|51536442|gb|AAU05459.1| At2g02740 [Arabidopsis
            thaliana] gi|51972072|gb|AAU15140.1| At2g02740
            [Arabidopsis thaliana] gi|330250524|gb|AEC05618.1|
            single-stranded DNA-binding protein WHY3 [Arabidopsis
            thaliana]
          Length = 268

 Score =  325 bits (833), Expect = 3e-86
 Identities = 161/218 (73%), Positives = 186/218 (85%), Gaps = 1/218 (0%)
 Frame = -2

Query: 1018 RHSDYFEAXXXXXXQRFSPNDSSFSSQQGTSPPRVFVGYSIYKGKAALTVEPRPPEFTPL 839
            R SDYFE        RF   DSS S     S PR +VG+SIYKGKAALT+EPR PEF  L
Sbjct: 59   RQSDYFEKQ------RFG--DSSSSQNAEVSSPRFYVGHSIYKGKAALTIEPRAPEFVAL 110

Query: 838  DSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFFHDPF 659
            +SGAFKL+KEGF+LLQFAPAAGVRQYDWSRKQVFSLSVTE+GNL+SLG ++SCEFFHDPF
Sbjct: 111  ESGAFKLTKEGFLLLQFAPAAGVRQYDWSRKQVFSLSVTEIGNLVSLGPRESCEFFHDPF 170

Query: 658  KGK-SDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSAFNY 482
            KGK SDEG+VRKVLK+EPLPDGSG FFNLSVQNKL+N+DE++YIP+TKAEFAVL SAFN+
Sbjct: 171  KGKGSDEGKVRKVLKVEPLPDGSGRFFNLSVQNKLLNVDESVYIPITKAEFAVLISAFNF 230

Query: 481  VLPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 368
            VLP+L+GW+ FA+SIKPEDSNR N+A+P+ G D EWSR
Sbjct: 231  VLPHLIGWSAFANSIKPEDSNRLNNASPKYGGDYEWSR 268


>gb|ESW25830.1| hypothetical protein PHAVU_003G068800g [Phaseolus vulgaris]
          Length = 262

 Score =  325 bits (832), Expect = 3e-86
 Identities = 156/218 (71%), Positives = 183/218 (83%)
 Frame = -2

Query: 1021 CRHSDYFEAXXXXXXQRFSPNDSSFSSQQGTSPPRVFVGYSIYKGKAALTVEPRPPEFTP 842
            CRHSD F+       QR +   +S        PPRV+VGYSIYKGKAALT+ PRPPEF P
Sbjct: 51   CRHSDLFDQNTLASSQRPTRPTAS------ALPPRVYVGYSIYKGKAALTLTPRPPEFVP 104

Query: 841  LDSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFFHDP 662
            LDSGA+K+SKEG+VLLQFAPA G RQYDW+RKQVFSLSV EMG++ISLGT++S EFFHDP
Sbjct: 105  LDSGAYKISKEGYVLLQFAPAVGTRQYDWNRKQVFSLSVGEMGSVISLGTRESFEFFHDP 164

Query: 661  FKGKSDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSAFNY 482
            FKGKSDEG+VRK+LK+EPLPDGSGH FNLSVQNKLVN+DENIYIP+TKAE AVL S FN+
Sbjct: 165  FKGKSDEGKVRKILKLEPLPDGSGHLFNLSVQNKLVNVDENIYIPITKAELAVLTSTFNF 224

Query: 481  VLPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 368
            ++PYLLGW+TFA+SIKPED++  N+ANPR G D EW+R
Sbjct: 225  IMPYLLGWHTFANSIKPEDTSGGNNANPRYGGDYEWNR 262


>ref|XP_002311601.1| hypothetical protein POPTR_0008s14840g [Populus trichocarpa]
           gi|118485247|gb|ABK94483.1| unknown [Populus
           trichocarpa] gi|222851421|gb|EEE88968.1| hypothetical
           protein POPTR_0008s14840g [Populus trichocarpa]
          Length = 265

 Score =  323 bits (828), Expect = 1e-85
 Identities = 153/200 (76%), Positives = 178/200 (89%)
 Frame = -2

Query: 967 SPNDSSFSSQQGTSPPRVFVGYSIYKGKAALTVEPRPPEFTPLDSGAFKLSKEGFVLLQF 788
           S +  S +   G SPP+VFVG+SIYKGKAALTVEPR PEF+PLDSGA+KL KEGFVLLQF
Sbjct: 66  SRSSPSSAPPVGESPPKVFVGHSIYKGKAALTVEPRSPEFSPLDSGAYKLVKEGFVLLQF 125

Query: 787 APAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFFHDPFKGKSDEGRVRKVLKIEP 608
           APAA VRQYDW+RKQVFSLSVTE+G+L+SL  K SCEFFHDP KGKSDEG+VRK+LK+EP
Sbjct: 126 APAASVRQYDWTRKQVFSLSVTEIGHLVSLDAKGSCEFFHDPNKGKSDEGKVRKLLKVEP 185

Query: 607 LPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSAFNYVLPYLLGWNTFASSIKPE 428
           LPDGSGHFFNLSVQNK++N+DENIYIPVTKAE+ VL SAFNY+LPYLLGW+ +A+SIKP+
Sbjct: 186 LPDGSGHFFNLSVQNKVLNIDENIYIPVTKAEYTVLTSAFNYILPYLLGWHAYANSIKPD 245

Query: 427 DSNRTNSANPRSGADLEWSR 368
           DS+R N+A+PR G D EWSR
Sbjct: 246 DSSRGNNASPRYGGDYEWSR 265


>ref|NP_172893.1| single-stranded DNA-binding protein WHY1 [Arabidopsis thaliana]
            gi|75191428|sp|Q9M9S3.1|WHY1_ARATH RecName:
            Full=Single-stranded DNA-binding protein WHY1,
            chloroplastic; AltName: Full=Protein PLASTID
            TRANSCRIPTIONALLY ACTIVE 1; AltName: Full=Protein WHIRLY
            1; Short=AtWHY1; Flags: Precursor
            gi|7262683|gb|AAF43941.1|AC012188_18 Contains similarity
            to a hypothetical protein from Arabidopsis thaliana
            gb|AC002521.2. EST gb|AI995686 comes from this gene
            [Arabidopsis thaliana]
            gi|12083312|gb|AAG48815.1|AF332452_1 putative DNA-binding
            protein p24 [Arabidopsis thaliana]
            gi|13877787|gb|AAK43971.1|AF370156_1 putative DNA-binding
            protein p24 [Arabidopsis thaliana]
            gi|16323418|gb|AAL15203.1| putative DNA-binding protein
            p24 [Arabidopsis thaliana] gi|332191039|gb|AEE29160.1|
            ssDNA-binding transcriptional regulator [Arabidopsis
            thaliana]
          Length = 263

 Score =  323 bits (827), Expect = 1e-85
 Identities = 156/217 (71%), Positives = 186/217 (85%)
 Frame = -2

Query: 1018 RHSDYFEAXXXXXXQRFSPNDSSFSSQQGTSPPRVFVGYSIYKGKAALTVEPRPPEFTPL 839
            R +DYFE        RF  + SS S  +G  P R +VG+SIYKGKAALTV+PR PEF  L
Sbjct: 54   RQTDYFEKQ------RFGDSSSSPSPAEGL-PARFYVGHSIYKGKAALTVDPRAPEFVAL 106

Query: 838  DSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFFHDPF 659
            DSGAFKLSK+GF+LLQFAP+AGVRQYDWS+KQVFSLSVTE+G L+SLG ++SCEFFHDPF
Sbjct: 107  DSGAFKLSKDGFLLLQFAPSAGVRQYDWSKKQVFSLSVTEIGTLVSLGPRESCEFFHDPF 166

Query: 658  KGKSDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSAFNYV 479
            KGKSDEG+VRKVLK+EPLPDGSGHFFNLSVQNKLVN+DE+IYIP+T+AEFAVL SAFN+V
Sbjct: 167  KGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLVNVDESIYIPITRAEFAVLISAFNFV 226

Query: 478  LPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 368
            LPYL+GW+ FA+SIKPE+++R N+A+P  G D EW+R
Sbjct: 227  LPYLIGWHAFANSIKPEETSRVNNASPNYGGDYEWNR 263