BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00013512
         (652 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006363721.1| PREDICTED: general transcription factor IIH ...   107   3e-21
ref|XP_006440427.1| hypothetical protein CICLE_v10024015mg, part...   100   5e-19
ref|XP_006477302.1| PREDICTED: general transcription factor IIH ...    99   1e-18
ref|XP_002329886.1| predicted protein [Populus trichocarpa] gi|5...    97   3e-18
ref|XP_002266482.1| PREDICTED: general transcription factor IIH ...    96   7e-18
gb|EPS71347.1| hypothetical protein M569_03416, partial [Genlise...    95   2e-17
gb|EOY24508.1| Nucleotide excision repair, TFIIH, subunit TTDA i...    91   2e-16
ref|XP_004298704.1| PREDICTED: general transcription factor IIH ...    91   4e-16
gb|AAF79634.1|AC025416_8 F5O11.12 [Arabidopsis thaliana]               91   4e-16
ref|XP_003566711.1| PREDICTED: xylem cysteine proteinase 1-like ...    91   4e-16
ref|XP_002889933.1| hypothetical protein ARALYDRAFT_471390 [Arab...    91   4e-16
ref|NP_172702.1| nucleotide excision repair, TFIIH, subunit TTDA...    91   4e-16
ref|XP_006417239.1| hypothetical protein EUTSA_v10009271mg [Eutr...    90   5e-16
ref|XP_004147953.1| PREDICTED: general transcription factor IIH ...    89   1e-15
ref|XP_002313692.1| hypothetical protein POPTR_0009s14080g [Popu...    89   1e-15
ref|XP_006584882.1| PREDICTED: general transcription factor IIH ...    89   1e-15
ref|XP_003525223.2| PREDICTED: general transcription factor IIH ...    89   1e-15
gb|EMJ12143.1| hypothetical protein PRUPE_ppa024121mg [Prunus pe...    88   2e-15
ref|XP_003614588.1| General transcription factor IIH subunit [Me...    87   3e-15
ref|XP_004515139.1| PREDICTED: general transcription factor IIH ...    87   4e-15

>ref|XP_006363721.1| PREDICTED: general transcription factor IIH subunit 5-like [Solanum
           tuberosum]
          Length = 70

 Score =  107 bits (267), Expect = 3e-21
 Identities = 49/58 (84%), Positives = 56/58 (96%)
 Frame = +3

Query: 216 DVPMAQFIINMNAALPQSQKFIIHILDNTHLFVRSDVAGMIRSAIADFREQNTYEKPS 389
           D+PM QFIINMNA+LPQSQKFIIH+LDNTHLFVRSD+AGMIRSAI+DFR+ NTYEKP+
Sbjct: 13  DIPMTQFIINMNASLPQSQKFIIHVLDNTHLFVRSDMAGMIRSAISDFRDANTYEKPA 70


>ref|XP_006440427.1| hypothetical protein CICLE_v10024015mg, partial [Citrus clementina]
           gi|557542689|gb|ESR53667.1| hypothetical protein
           CICLE_v10024015mg, partial [Citrus clementina]
          Length = 130

 Score =  100 bits (248), Expect = 5e-19
 Identities = 53/100 (53%), Positives = 68/100 (68%)
 Frame = +3

Query: 90  FSATNTANRALGCKFDRERFAKLPASSQLCETPIXXXXXXXXDVPMAQFIINMNAALPQS 269
           FS++  +  A+ C       A LP S                D+PMAQFIINMNA++PQS
Sbjct: 45  FSSSRHSLNAVDCSHGCSHRATLPPSHH--------------DIPMAQFIINMNASMPQS 90

Query: 270 QKFIIHILDNTHLFVRSDVAGMIRSAIADFREQNTYEKPS 389
           QKFIIHILD+THLFV+ ++A MIRSAIA+FR+QN+YEKP+
Sbjct: 91  QKFIIHILDSTHLFVQPNMAEMIRSAIAEFRDQNSYEKPA 130


>ref|XP_006477302.1| PREDICTED: general transcription factor IIH subunit 5-like isoform
           X1 [Citrus sinensis] gi|568846947|ref|XP_006477303.1|
           PREDICTED: general transcription factor IIH subunit
           5-like isoform X2 [Citrus sinensis]
           gi|568846949|ref|XP_006477304.1| PREDICTED: general
           transcription factor IIH subunit 5-like isoform X3
           [Citrus sinensis]
          Length = 70

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 45/58 (77%), Positives = 56/58 (96%)
 Frame = +3

Query: 216 DVPMAQFIINMNAALPQSQKFIIHILDNTHLFVRSDVAGMIRSAIADFREQNTYEKPS 389
           D+PMAQFIINMNA++PQSQKFIIHILD+THLFV+ ++A MIRSAIA+FR+QN+YEKP+
Sbjct: 13  DIPMAQFIINMNASMPQSQKFIIHILDSTHLFVQPNMAEMIRSAIAEFRDQNSYEKPA 70


>ref|XP_002329886.1| predicted protein [Populus trichocarpa]
           gi|566147873|ref|XP_006368720.1| hypothetical protein
           POPTR_0001s08090g [Populus trichocarpa]
           gi|566147875|ref|XP_006368721.1| hypothetical protein
           POPTR_0001s08090g [Populus trichocarpa]
           gi|566147877|ref|XP_006368722.1| hypothetical protein
           POPTR_0001s08090g [Populus trichocarpa]
           gi|550346807|gb|ERP65289.1| hypothetical protein
           POPTR_0001s08090g [Populus trichocarpa]
           gi|550346808|gb|ERP65290.1| hypothetical protein
           POPTR_0001s08090g [Populus trichocarpa]
           gi|550346809|gb|ERP65291.1| hypothetical protein
           POPTR_0001s08090g [Populus trichocarpa]
          Length = 70

 Score = 97.4 bits (241), Expect = 3e-18
 Identities = 45/58 (77%), Positives = 54/58 (93%)
 Frame = +3

Query: 216 DVPMAQFIINMNAALPQSQKFIIHILDNTHLFVRSDVAGMIRSAIADFREQNTYEKPS 389
           D+PMAQFIIN+NA+LP SQKFIIHILD+TH+FV+  V+ MIRSAI+DFREQN+YEKPS
Sbjct: 13  DIPMAQFIINLNASLPASQKFIIHILDSTHMFVQPHVSDMIRSAISDFREQNSYEKPS 70


>ref|XP_002266482.1| PREDICTED: general transcription factor IIH subunit 5 [Vitis
           vinifera] gi|297742669|emb|CBI34818.3| unnamed protein
           product [Vitis vinifera]
          Length = 70

 Score = 96.3 bits (238), Expect = 7e-18
 Identities = 44/58 (75%), Positives = 54/58 (93%)
 Frame = +3

Query: 216 DVPMAQFIINMNAALPQSQKFIIHILDNTHLFVRSDVAGMIRSAIADFREQNTYEKPS 389
           D+PMAQFIINMNA++P SQKFIIH+LD+THLFV+  VA MIRSAI++FREQN+YEKP+
Sbjct: 13  DIPMAQFIINMNASMPASQKFIIHVLDSTHLFVQPHVAEMIRSAISEFREQNSYEKPA 70


>gb|EPS71347.1| hypothetical protein M569_03416, partial [Genlisea aurea]
          Length = 69

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 44/57 (77%), Positives = 52/57 (91%)
 Frame = +3

Query: 216 DVPMAQFIINMNAALPQSQKFIIHILDNTHLFVRSDVAGMIRSAIADFREQNTYEKP 386
           DVPMAQ+II++N +LPQSQ+FIIH+LD+THLFVRSDV  MIRS IA FR+QNTYEKP
Sbjct: 13  DVPMAQYIIHINNSLPQSQRFIIHVLDSTHLFVRSDVGTMIRSTIASFRDQNTYEKP 69


>gb|EOY24508.1| Nucleotide excision repair, TFIIH, subunit TTDA isoform 1
           [Theobroma cacao] gi|508777253|gb|EOY24509.1| Nucleotide
           excision repair, TFIIH, subunit TTDA isoform 1
           [Theobroma cacao]
          Length = 70

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 39/58 (67%), Positives = 52/58 (89%)
 Frame = +3

Query: 216 DVPMAQFIINMNAALPQSQKFIIHILDNTHLFVRSDVAGMIRSAIADFREQNTYEKPS 389
           D+PMAQFI+N+NA++P SQKFIIH+LDNTH FV+   A MIRSAI++FR+QN+Y+KP+
Sbjct: 13  DIPMAQFIVNLNASMPASQKFIIHVLDNTHFFVQPHAAEMIRSAISEFRDQNSYDKPT 70


>ref|XP_004298704.1| PREDICTED: general transcription factor IIH subunit 5-like isoform
           1 [Fragaria vesca subsp. vesca]
           gi|470125430|ref|XP_004298705.1| PREDICTED: general
           transcription factor IIH subunit 5-like isoform 2
           [Fragaria vesca subsp. vesca]
          Length = 70

 Score = 90.5 bits (223), Expect = 4e-16
 Identities = 41/58 (70%), Positives = 51/58 (87%)
 Frame = +3

Query: 216 DVPMAQFIINMNAALPQSQKFIIHILDNTHLFVRSDVAGMIRSAIADFREQNTYEKPS 389
           D+PMAQFIIN N +LPQSQKFIIH+LD THLFV+   A MI+SAI++FR+QN+YEKP+
Sbjct: 13  DIPMAQFIINYNNSLPQSQKFIIHVLDGTHLFVQPHAAEMIKSAISEFRDQNSYEKPT 70


>gb|AAF79634.1|AC025416_8 F5O11.12 [Arabidopsis thaliana]
          Length = 113

 Score = 90.5 bits (223), Expect = 4e-16
 Identities = 40/58 (68%), Positives = 51/58 (87%)
 Frame = +3

Query: 216 DVPMAQFIINMNAALPQSQKFIIHILDNTHLFVRSDVAGMIRSAIADFREQNTYEKPS 389
           D+PM QFI+NMN ++P SQKFIIH+LD+THLFV+  V  MIRSAI+DFR+QN+YEKP+
Sbjct: 55  DIPMTQFIVNMNNSMPPSQKFIIHVLDSTHLFVQPHVEQMIRSAISDFRDQNSYEKPT 112


>ref|XP_003566711.1| PREDICTED: xylem cysteine proteinase 1-like [Brachypodium
           distachyon]
          Length = 457

 Score = 90.5 bits (223), Expect = 4e-16
 Identities = 51/126 (40%), Positives = 72/126 (57%)
 Frame = +3

Query: 216 DVPMAQFIINMNAALPQSQKFIIHILDNTHLFVRSDVAGMIRSAIADFREQNTYEKPS*F 395
           DVPMAQFI+N+NA++P S+KFI+H+LD TH+FV+  V  MIRS IA+FR+QN+YEKP+  
Sbjct: 13  DVPMAQFIVNLNASMPASEKFIVHMLDPTHMFVQPHVGEMIRSKIAEFRDQNSYEKPTSI 72

Query: 396 FLLRFTILCCGSAFWIS*DEILLLSTKTFFKEEVVVLMA**TGNLRIVQNLYLVCFNNVL 575
                T  C  S+        +L  T   F      +MA     +++   L L+C    +
Sbjct: 73  AQTEITNTCILSS--------ILQQTSQHFHSRHRSIMASSASQMKLSLALLLLCVGACV 124

Query: 576 LFQSTF 593
              S F
Sbjct: 125 ARNSDF 130


>ref|XP_002889933.1| hypothetical protein ARALYDRAFT_471390 [Arabidopsis lyrata subsp.
           lyrata] gi|297335775|gb|EFH66192.1| hypothetical protein
           ARALYDRAFT_471390 [Arabidopsis lyrata subsp. lyrata]
          Length = 71

 Score = 90.5 bits (223), Expect = 4e-16
 Identities = 40/58 (68%), Positives = 51/58 (87%)
 Frame = +3

Query: 216 DVPMAQFIINMNAALPQSQKFIIHILDNTHLFVRSDVAGMIRSAIADFREQNTYEKPS 389
           D+PM QFI+NMN ++P SQKFIIH+LD+THLFV+  V  MIRSAI+DFR+QN+YEKP+
Sbjct: 13  DIPMTQFIVNMNNSMPPSQKFIIHVLDSTHLFVQPHVEQMIRSAISDFRDQNSYEKPT 70


>ref|NP_172702.1| nucleotide excision repair, TFIIH, subunit TTDA [Arabidopsis
           thaliana] gi|38566546|gb|AAR24163.1| At1g12400
           [Arabidopsis thaliana] gi|40823747|gb|AAR92302.1|
           At1g12400 [Arabidopsis thaliana]
           gi|332190754|gb|AEE28875.1| nucleotide excision repair,
           TFIIH, subunit TTDA [Arabidopsis thaliana]
          Length = 71

 Score = 90.5 bits (223), Expect = 4e-16
 Identities = 40/58 (68%), Positives = 51/58 (87%)
 Frame = +3

Query: 216 DVPMAQFIINMNAALPQSQKFIIHILDNTHLFVRSDVAGMIRSAIADFREQNTYEKPS 389
           D+PM QFI+NMN ++P SQKFIIH+LD+THLFV+  V  MIRSAI+DFR+QN+YEKP+
Sbjct: 13  DIPMTQFIVNMNNSMPPSQKFIIHVLDSTHLFVQPHVEQMIRSAISDFRDQNSYEKPT 70


>ref|XP_006417239.1| hypothetical protein EUTSA_v10009271mg [Eutrema salsugineum]
           gi|557095010|gb|ESQ35592.1| hypothetical protein
           EUTSA_v10009271mg [Eutrema salsugineum]
          Length = 70

 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 39/58 (67%), Positives = 51/58 (87%)
 Frame = +3

Query: 216 DVPMAQFIINMNAALPQSQKFIIHILDNTHLFVRSDVAGMIRSAIADFREQNTYEKPS 389
           D+PMAQFI+NMN+++P SQKFIIH+LD THLFV+  V  MIRS I++FR+QN+YEKP+
Sbjct: 13  DIPMAQFIVNMNSSMPSSQKFIIHVLDGTHLFVQPHVEQMIRSTISEFRDQNSYEKPT 70


>ref|XP_004147953.1| PREDICTED: general transcription factor IIH subunit 5-like [Cucumis
           sativus] gi|449494289|ref|XP_004159503.1| PREDICTED:
           general transcription factor IIH subunit 5-like [Cucumis
           sativus]
          Length = 70

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 41/58 (70%), Positives = 51/58 (87%)
 Frame = +3

Query: 216 DVPMAQFIINMNAALPQSQKFIIHILDNTHLFVRSDVAGMIRSAIADFREQNTYEKPS 389
           D+PMAQFIIN NA+LP S +FIIHILDNTH+FV+  VA MIR+AI++FREQ +YEKP+
Sbjct: 13  DIPMAQFIINYNASLPASHRFIIHILDNTHMFVQPHVADMIRNAISEFREQISYEKPT 70


>ref|XP_002313692.1| hypothetical protein POPTR_0009s14080g [Populus trichocarpa]
           gi|222850100|gb|EEE87647.1| hypothetical protein
           POPTR_0009s14080g [Populus trichocarpa]
          Length = 70

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 40/57 (70%), Positives = 50/57 (87%)
 Frame = +3

Query: 216 DVPMAQFIINMNAALPQSQKFIIHILDNTHLFVRSDVAGMIRSAIADFREQNTYEKP 386
           D+PM QFIIN+NA+LP  QKF+IHILD++H+FV+  V+ MIRSA ADFREQN+YEKP
Sbjct: 13  DIPMVQFIINLNASLPALQKFVIHILDSSHMFVQPHVSEMIRSATADFREQNSYEKP 69


>ref|XP_006584882.1| PREDICTED: general transcription factor IIH subunit 5-like [Glycine
           max]
          Length = 70

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 42/58 (72%), Positives = 48/58 (82%)
 Frame = +3

Query: 216 DVPMAQFIINMNAALPQSQKFIIHILDNTHLFVRSDVAGMIRSAIADFREQNTYEKPS 389
           D+PMAQ+IINMNA+LP S KFIIHILDNTH+FV+  V  MIRS IA FRE NTY KP+
Sbjct: 13  DIPMAQYIINMNASLPASDKFIIHILDNTHMFVQPHVEQMIRSRIAKFREDNTYVKPN 70


>ref|XP_003525223.2| PREDICTED: general transcription factor IIH subunit 5-like [Glycine
           max]
          Length = 115

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 42/58 (72%), Positives = 48/58 (82%)
 Frame = +3

Query: 216 DVPMAQFIINMNAALPQSQKFIIHILDNTHLFVRSDVAGMIRSAIADFREQNTYEKPS 389
           D+PMAQ+IINMNA+LP S KFIIHILDNTH+FV+  V  MIRS IA FRE NTY KP+
Sbjct: 58  DIPMAQYIINMNASLPASDKFIIHILDNTHMFVQPHVEQMIRSQIAKFREDNTYVKPN 115


>gb|EMJ12143.1| hypothetical protein PRUPE_ppa024121mg [Prunus persica]
           gi|462406895|gb|EMJ12359.1| hypothetical protein
           PRUPE_ppb011951mg [Prunus persica]
          Length = 70

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 40/58 (68%), Positives = 50/58 (86%)
 Frame = +3

Query: 216 DVPMAQFIINMNAALPQSQKFIIHILDNTHLFVRSDVAGMIRSAIADFREQNTYEKPS 389
           D+PMAQFIIN N  LP SQ+FIIH+LD+THLFV+   A MIRSAI++FR+QN+YEKP+
Sbjct: 13  DIPMAQFIINYNNTLPPSQQFIIHVLDSTHLFVQPHAAEMIRSAISEFRDQNSYEKPT 70


>ref|XP_003614588.1| General transcription factor IIH subunit [Medicago truncatula]
           gi|355515923|gb|AES97546.1| General transcription factor
           IIH subunit [Medicago truncatula]
           gi|388522225|gb|AFK49174.1| unknown [Medicago
           truncatula]
          Length = 70

 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 41/58 (70%), Positives = 48/58 (82%)
 Frame = +3

Query: 216 DVPMAQFIINMNAALPQSQKFIIHILDNTHLFVRSDVAGMIRSAIADFREQNTYEKPS 389
           D+PMAQ+I+NMNA+LP S KFIIHILD+TH+FV+  V  MIRS IA FRE NTY KPS
Sbjct: 13  DIPMAQYIVNMNASLPASDKFIIHILDSTHMFVQPHVEQMIRSQIAKFREDNTYVKPS 70


>ref|XP_004515139.1| PREDICTED: general transcription factor IIH subunit 5-like [Cicer
           arietinum] gi|502178393|ref|XP_004516242.1| PREDICTED:
           general transcription factor IIH subunit 5-like isoform
           X1 [Cicer arietinum] gi|502178397|ref|XP_004516243.1|
           PREDICTED: general transcription factor IIH subunit
           5-like isoform X2 [Cicer arietinum]
           gi|502178401|ref|XP_004516244.1| PREDICTED: general
           transcription factor IIH subunit 5-like isoform X3
           [Cicer arietinum]
          Length = 70

 Score = 87.0 bits (214), Expect = 4e-15
 Identities = 42/58 (72%), Positives = 48/58 (82%)
 Frame = +3

Query: 216 DVPMAQFIINMNAALPQSQKFIIHILDNTHLFVRSDVAGMIRSAIADFREQNTYEKPS 389
           D+PMAQ+IINMNA+LP S KFIIHILD+TH+FV+  V  MIRS IA FRE NTY KPS
Sbjct: 13  DIPMAQYIINMNASLPASDKFIIHILDSTHMFVQPHVELMIRSQIAKFREDNTYVKPS 70