BLASTX nr result
ID: Catharanthus22_contig00013462
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00013462
(390 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271564.2| PREDICTED: ribosome biogenesis GTPase A-like... 97 3e-18
gb|EMJ01410.1| hypothetical protein PRUPE_ppa015646mg [Prunus pe... 96 6e-18
ref|XP_004150129.1| PREDICTED: ribosome biogenesis GTPase A-like... 94 2e-17
ref|XP_002520741.1| Nucleolar GTP-binding protein, putative [Ric... 93 3e-17
ref|XP_006352778.1| PREDICTED: mitochondrial ribosome-associated... 93 4e-17
ref|XP_006444070.1| hypothetical protein CICLE_v10020657mg [Citr... 91 2e-16
ref|XP_006444069.1| hypothetical protein CICLE_v10020657mg [Citr... 91 2e-16
ref|XP_004290652.1| PREDICTED: ribosome biogenesis GTPase A-like... 90 4e-16
ref|XP_002307583.1| GTP-binding family protein [Populus trichoca... 89 5e-16
ref|XP_006383665.1| hypothetical protein POPTR_0005s23150g [Popu... 89 5e-16
ref|XP_004242332.1| PREDICTED: ribosome biogenesis GTPase A-like... 89 6e-16
gb|EOX94772.1| GTP-binding family protein [Theobroma cacao] 89 8e-16
ref|XP_006859139.1| hypothetical protein AMTR_s00070p00106620 [A... 87 3e-15
ref|XP_006603706.1| PREDICTED: uncharacterized protein LOC100784... 84 3e-14
gb|EMT08793.1| Ribosome biogenesis GTPase A [Aegilops tauschii] 84 3e-14
gb|EMS47043.1| Ribosome biogenesis GTPase A [Triticum urartu] 84 3e-14
dbj|BAJ93679.1| predicted protein [Hordeum vulgare subsp. vulgare] 84 3e-14
ref|NP_001242175.1| uncharacterized protein LOC100784201 [Glycin... 84 3e-14
gb|ESW34421.1| hypothetical protein PHAVU_001G151200g [Phaseolus... 83 3e-14
ref|XP_003566214.1| PREDICTED: LOW QUALITY PROTEIN: ribosome bio... 83 3e-14
>ref|XP_002271564.2| PREDICTED: ribosome biogenesis GTPase A-like [Vitis vinifera]
gi|296086696|emb|CBI32331.3| unnamed protein product
[Vitis vinifera]
Length = 367
Score = 96.7 bits (239), Expect = 3e-18
Identities = 44/51 (86%), Positives = 48/51 (94%)
Frame = -3
Query: 388 RYKIETDGHCGRIFVQKLARQLFNGDSHQAAFRILSDFRKGKFGWMALERP 236
RYKI+TDG CG IFVQKLA QLFNGD+HQAAFRIL+DFRKGKFGW+ALERP
Sbjct: 315 RYKIDTDGLCGNIFVQKLALQLFNGDTHQAAFRILTDFRKGKFGWIALERP 365
>gb|EMJ01410.1| hypothetical protein PRUPE_ppa015646mg [Prunus persica]
Length = 392
Score = 95.5 bits (236), Expect = 6e-18
Identities = 41/51 (80%), Positives = 47/51 (92%)
Frame = -3
Query: 388 RYKIETDGHCGRIFVQKLARQLFNGDSHQAAFRILSDFRKGKFGWMALERP 236
RYK++ DGHCG+ FVQKLA +FNGDSHQAAFR+LSDFRKGKFGW+ALERP
Sbjct: 340 RYKMDVDGHCGKTFVQKLAVHMFNGDSHQAAFRVLSDFRKGKFGWIALERP 390
>ref|XP_004150129.1| PREDICTED: ribosome biogenesis GTPase A-like [Cucumis sativus]
gi|449507918|ref|XP_004163166.1| PREDICTED: ribosome
biogenesis GTPase A-like [Cucumis sativus]
Length = 370
Score = 93.6 bits (231), Expect = 2e-17
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = -3
Query: 388 RYKIETDGHCGRIFVQKLARQLFNGDSHQAAFRILSDFRKGKFGWMALERP 236
RYK++ G CG+IFVQKLA QLFNGD+HQAAFRILSDFRKGKFGW ALERP
Sbjct: 317 RYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERP 367
>ref|XP_002520741.1| Nucleolar GTP-binding protein, putative [Ricinus communis]
gi|223540126|gb|EEF41703.1| Nucleolar GTP-binding
protein, putative [Ricinus communis]
Length = 366
Score = 93.2 bits (230), Expect = 3e-17
Identities = 42/51 (82%), Positives = 48/51 (94%)
Frame = -3
Query: 388 RYKIETDGHCGRIFVQKLARQLFNGDSHQAAFRILSDFRKGKFGWMALERP 236
RYKI+ DG+ GRIF+QKLA QLFNGD+HQAAFRIL+DFRKGKFGW+ALERP
Sbjct: 293 RYKIDVDGYNGRIFIQKLAIQLFNGDTHQAAFRILTDFRKGKFGWVALERP 343
>ref|XP_006352778.1| PREDICTED: mitochondrial ribosome-associated GTPase 1-like [Solanum
tuberosum]
Length = 370
Score = 92.8 bits (229), Expect = 4e-17
Identities = 43/53 (81%), Positives = 47/53 (88%)
Frame = -3
Query: 388 RYKIETDGHCGRIFVQKLARQLFNGDSHQAAFRILSDFRKGKFGWMALERPLK 230
RYKIE DG CG+IFVQKLA QLFN D++QAAFRIL DFRKGKFGW+ALERP K
Sbjct: 318 RYKIEADGRCGKIFVQKLAVQLFNADNNQAAFRILQDFRKGKFGWIALERPPK 370
>ref|XP_006444070.1| hypothetical protein CICLE_v10020657mg [Citrus clementina]
gi|568852105|ref|XP_006479721.1| PREDICTED:
mitochondrial ribosome-associated GTPase 1-like isoform
X1 [Citrus sinensis] gi|557546332|gb|ESR57310.1|
hypothetical protein CICLE_v10020657mg [Citrus
clementina]
Length = 373
Score = 90.5 bits (223), Expect = 2e-16
Identities = 40/51 (78%), Positives = 46/51 (90%)
Frame = -3
Query: 388 RYKIETDGHCGRIFVQKLARQLFNGDSHQAAFRILSDFRKGKFGWMALERP 236
RYKI+ DG CG+ FVQKLA LFNGD+HQAAFRIL+DFRKGKFGW++LERP
Sbjct: 320 RYKIDMDGTCGKTFVQKLALHLFNGDTHQAAFRILTDFRKGKFGWISLERP 370
>ref|XP_006444069.1| hypothetical protein CICLE_v10020657mg [Citrus clementina]
gi|557546331|gb|ESR57309.1| hypothetical protein
CICLE_v10020657mg [Citrus clementina]
Length = 372
Score = 90.5 bits (223), Expect = 2e-16
Identities = 40/51 (78%), Positives = 46/51 (90%)
Frame = -3
Query: 388 RYKIETDGHCGRIFVQKLARQLFNGDSHQAAFRILSDFRKGKFGWMALERP 236
RYKI+ DG CG+ FVQKLA LFNGD+HQAAFRIL+DFRKGKFGW++LERP
Sbjct: 320 RYKIDMDGTCGKTFVQKLALHLFNGDTHQAAFRILTDFRKGKFGWISLERP 370
>ref|XP_004290652.1| PREDICTED: ribosome biogenesis GTPase A-like [Fragaria vesca subsp.
vesca]
Length = 370
Score = 89.7 bits (221), Expect = 4e-16
Identities = 38/51 (74%), Positives = 47/51 (92%)
Frame = -3
Query: 388 RYKIETDGHCGRIFVQKLARQLFNGDSHQAAFRILSDFRKGKFGWMALERP 236
RYK++ DG+CG+ +VQKLA LFNGD+HQAAFRIL+DFRKG+FGW+ALERP
Sbjct: 318 RYKMDADGYCGKTYVQKLAVHLFNGDTHQAAFRILTDFRKGRFGWIALERP 368
>ref|XP_002307583.1| GTP-binding family protein [Populus trichocarpa]
gi|222857032|gb|EEE94579.1| GTP-binding family protein
[Populus trichocarpa]
Length = 387
Score = 89.4 bits (220), Expect = 5e-16
Identities = 40/51 (78%), Positives = 45/51 (88%)
Frame = -3
Query: 388 RYKIETDGHCGRIFVQKLARQLFNGDSHQAAFRILSDFRKGKFGWMALERP 236
RYK++ D CG+IFVQKL+ LFNGD+HQAAFRILSDFRKGKFGW ALERP
Sbjct: 315 RYKMDADDFCGKIFVQKLSVHLFNGDTHQAAFRILSDFRKGKFGWAALERP 365
>ref|XP_006383665.1| hypothetical protein POPTR_0005s23150g [Populus trichocarpa]
gi|118485967|gb|ABK94828.1| unknown [Populus
trichocarpa] gi|550339581|gb|ERP61462.1| hypothetical
protein POPTR_0005s23150g [Populus trichocarpa]
Length = 367
Score = 89.4 bits (220), Expect = 5e-16
Identities = 40/51 (78%), Positives = 45/51 (88%)
Frame = -3
Query: 388 RYKIETDGHCGRIFVQKLARQLFNGDSHQAAFRILSDFRKGKFGWMALERP 236
RYK++ D CG+IFVQKL+ LFNGD+HQAAFRILSDFRKGKFGW ALERP
Sbjct: 315 RYKMDADDFCGKIFVQKLSVHLFNGDTHQAAFRILSDFRKGKFGWAALERP 365
>ref|XP_004242332.1| PREDICTED: ribosome biogenesis GTPase A-like [Solanum lycopersicum]
Length = 370
Score = 89.0 bits (219), Expect = 6e-16
Identities = 42/53 (79%), Positives = 46/53 (86%)
Frame = -3
Query: 388 RYKIETDGHCGRIFVQKLARQLFNGDSHQAAFRILSDFRKGKFGWMALERPLK 230
RYKIE DG G+IFVQKLA QLFN D++QAAFRIL DFRKGKFGW+ALERP K
Sbjct: 318 RYKIEADGRSGKIFVQKLAVQLFNADNNQAAFRILQDFRKGKFGWIALERPPK 370
>gb|EOX94772.1| GTP-binding family protein [Theobroma cacao]
Length = 370
Score = 88.6 bits (218), Expect = 8e-16
Identities = 37/51 (72%), Positives = 46/51 (90%)
Frame = -3
Query: 388 RYKIETDGHCGRIFVQKLARQLFNGDSHQAAFRILSDFRKGKFGWMALERP 236
RYK++ DG CG+IF++K+A +LFNGD QAAFR+LSDFRKGKFGW+ALERP
Sbjct: 318 RYKVDVDGQCGKIFIEKVALRLFNGDIQQAAFRVLSDFRKGKFGWVALERP 368
>ref|XP_006859139.1| hypothetical protein AMTR_s00070p00106620 [Amborella trichopoda]
gi|548863252|gb|ERN20606.1| hypothetical protein
AMTR_s00070p00106620 [Amborella trichopoda]
Length = 368
Score = 86.7 bits (213), Expect = 3e-15
Identities = 37/51 (72%), Positives = 45/51 (88%)
Frame = -3
Query: 388 RYKIETDGHCGRIFVQKLARQLFNGDSHQAAFRILSDFRKGKFGWMALERP 236
RYK++ DG CG+ FV K+A QLFNGD HQAAFR+L+DFRKGKFGW++LERP
Sbjct: 316 RYKMDPDGLCGKTFVDKIALQLFNGDVHQAAFRVLTDFRKGKFGWVSLERP 366
>ref|XP_006603706.1| PREDICTED: uncharacterized protein LOC100784201 isoform X1 [Glycine
max]
Length = 366
Score = 83.6 bits (205), Expect = 3e-14
Identities = 38/53 (71%), Positives = 45/53 (84%)
Frame = -3
Query: 388 RYKIETDGHCGRIFVQKLARQLFNGDSHQAAFRILSDFRKGKFGWMALERPLK 230
RYKI+ D GRIF++KLA ++FNGD HQAAFR+L+DFRKGKFGW ALERP K
Sbjct: 314 RYKIDVDCRDGRIFIEKLAVRVFNGDVHQAAFRVLADFRKGKFGWTALERPPK 366
>gb|EMT08793.1| Ribosome biogenesis GTPase A [Aegilops tauschii]
Length = 395
Score = 83.6 bits (205), Expect = 3e-14
Identities = 37/51 (72%), Positives = 44/51 (86%)
Frame = -3
Query: 388 RYKIETDGHCGRIFVQKLARQLFNGDSHQAAFRILSDFRKGKFGWMALERP 236
RYKI+ D CG++FV KL+ LFNGD+ QAAFRILSDFRKG+FGW+ALERP
Sbjct: 343 RYKIDVDSDCGKLFVTKLSVHLFNGDTTQAAFRILSDFRKGRFGWVALERP 393
>gb|EMS47043.1| Ribosome biogenesis GTPase A [Triticum urartu]
Length = 410
Score = 83.6 bits (205), Expect = 3e-14
Identities = 37/51 (72%), Positives = 44/51 (86%)
Frame = -3
Query: 388 RYKIETDGHCGRIFVQKLARQLFNGDSHQAAFRILSDFRKGKFGWMALERP 236
RYKI+ D CG++FV KL+ LFNGD+ QAAFRILSDFRKG+FGW+ALERP
Sbjct: 358 RYKIDVDSDCGKLFVTKLSVHLFNGDTTQAAFRILSDFRKGRFGWVALERP 408
>dbj|BAJ93679.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 372
Score = 83.6 bits (205), Expect = 3e-14
Identities = 37/51 (72%), Positives = 44/51 (86%)
Frame = -3
Query: 388 RYKIETDGHCGRIFVQKLARQLFNGDSHQAAFRILSDFRKGKFGWMALERP 236
RYKI+ D CG++FV KL+ LFNGD+ QAAFRILSDFRKG+FGW+ALERP
Sbjct: 320 RYKIDVDSDCGKLFVTKLSVHLFNGDTTQAAFRILSDFRKGRFGWVALERP 370
>ref|NP_001242175.1| uncharacterized protein LOC100784201 [Glycine max]
gi|255634965|gb|ACU17841.1| unknown [Glycine max]
Length = 391
Score = 83.6 bits (205), Expect = 3e-14
Identities = 38/53 (71%), Positives = 45/53 (84%)
Frame = -3
Query: 388 RYKIETDGHCGRIFVQKLARQLFNGDSHQAAFRILSDFRKGKFGWMALERPLK 230
RYKI+ D GRIF++KLA ++FNGD HQAAFR+L+DFRKGKFGW ALERP K
Sbjct: 314 RYKIDVDCRDGRIFIEKLAVRVFNGDVHQAAFRVLADFRKGKFGWTALERPPK 366
>gb|ESW34421.1| hypothetical protein PHAVU_001G151200g [Phaseolus vulgaris]
Length = 365
Score = 83.2 bits (204), Expect = 3e-14
Identities = 37/51 (72%), Positives = 44/51 (86%)
Frame = -3
Query: 388 RYKIETDGHCGRIFVQKLARQLFNGDSHQAAFRILSDFRKGKFGWMALERP 236
RYKI+ D G+IFV+KLA ++FNGD HQAAFR+L+DFRKGKFGW ALERP
Sbjct: 313 RYKIDVDSQNGKIFVEKLAVRVFNGDVHQAAFRVLADFRKGKFGWTALERP 363
>ref|XP_003566214.1| PREDICTED: LOW QUALITY PROTEIN: ribosome biogenesis GTPase A-like
[Brachypodium distachyon]
Length = 376
Score = 83.2 bits (204), Expect = 3e-14
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -3
Query: 388 RYKIETDGHCGRIFVQKLARQLFNGDSHQAAFRILSDFRKGKFGWMALERP 236
RYKI D CG++FV KL+ LFNGD+ QAAFRILSDFRKG+FGW+ALERP
Sbjct: 324 RYKINVDSDCGKMFVTKLSLHLFNGDTSQAAFRILSDFRKGRFGWVALERP 374