BLASTX nr result
ID: Catharanthus22_contig00013426
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00013426
(380 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006356106.1| PREDICTED: putative SWI/SNF-related matrix-a... 97 3e-18
ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-a... 96 5e-18
ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricin... 96 5e-18
ref|NP_199166.1| Helicase protein with RING/U-box domain [Arabid... 96 7e-18
ref|XP_002865418.1| SNF2 domain-containing protein [Arabidopsis ... 96 7e-18
ref|XP_004234234.1| PREDICTED: putative SWI/SNF-related matrix-a... 95 9e-18
ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-a... 95 9e-18
emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera] 95 9e-18
gb|EOY05973.1| Helicase protein with RING/U-box domain [Theobrom... 94 2e-17
gb|EMS62933.1| Putative SWI/SNF-related matrix-associated actin-... 94 2e-17
gb|EMT07824.1| Putative SWI/SNF-related matrix-associated actin-... 93 3e-17
ref|XP_004297995.1| PREDICTED: putative SWI/SNF-related matrix-a... 93 3e-17
ref|XP_006279560.1| hypothetical protein CARUB_v10025760mg [Caps... 93 4e-17
gb|EXB98159.1| SMARCA3-like protein 3 [Morus notabilis] 92 6e-17
ref|XP_006385564.1| hypothetical protein POPTR_0003s08160g [Popu... 92 7e-17
gb|EMJ26646.1| hypothetical protein PRUPE_ppa000367mg [Prunus pe... 92 9e-17
ref|XP_002867887.1| hypothetical protein ARALYDRAFT_914628 [Arab... 91 1e-16
emb|CBI23583.3| unnamed protein product [Vitis vinifera] 91 2e-16
ref|XP_002329602.1| chromatin remodeling complex subunit [Populu... 90 3e-16
ref|XP_006653171.1| PREDICTED: putative SWI/SNF-related matrix-a... 89 8e-16
>ref|XP_006356106.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 3-like 3-like
[Solanum tuberosum]
Length = 1138
Score = 96.7 bits (239), Expect = 3e-18
Identities = 49/54 (90%), Positives = 53/54 (98%)
Frame = +2
Query: 2 GQKRTVRVRRFIVKDTVEERLQQVQARKQRMIAGALTNEEVRSARIEELNMLFR 163
GQK+TVRVRRFIV+DTVEER+QQVQARKQRMIAGALT+EEVRSARIEEL MLFR
Sbjct: 1085 GQKKTVRVRRFIVEDTVEERMQQVQARKQRMIAGALTDEEVRSARIEELKMLFR 1138
>ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 3-like 3-like
[Cucumis sativus] gi|449523563|ref|XP_004168793.1|
PREDICTED: putative SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A member
3-like 3-like [Cucumis sativus]
Length = 1113
Score = 95.9 bits (237), Expect = 5e-18
Identities = 49/54 (90%), Positives = 52/54 (96%)
Frame = +2
Query: 2 GQKRTVRVRRFIVKDTVEERLQQVQARKQRMIAGALTNEEVRSARIEELNMLFR 163
GQKR VRVRRFIVKDTVEER+QQVQARKQRMIAGALT+EEVR+ARIEEL MLFR
Sbjct: 1060 GQKRRVRVRRFIVKDTVEERMQQVQARKQRMIAGALTDEEVRTARIEELKMLFR 1113
>ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricinus communis]
gi|223531235|gb|EEF33080.1| DNA repair helicase rad5,16,
putative [Ricinus communis]
Length = 1051
Score = 95.9 bits (237), Expect = 5e-18
Identities = 49/54 (90%), Positives = 52/54 (96%)
Frame = +2
Query: 2 GQKRTVRVRRFIVKDTVEERLQQVQARKQRMIAGALTNEEVRSARIEELNMLFR 163
GQKRTV VRRFIVKDT+EER+QQVQARKQRMIAGALT+EEVRSARIEEL MLFR
Sbjct: 998 GQKRTVTVRRFIVKDTLEERMQQVQARKQRMIAGALTDEEVRSARIEELKMLFR 1051
>ref|NP_199166.1| Helicase protein with RING/U-box domain [Arabidopsis thaliana]
gi|60390960|sp|Q9FIY7.1|SM3L3_ARATH RecName:
Full=Putative SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A member
3-like 3; Short=SMARCA3-like protein 3
gi|10178192|dbj|BAB11616.1| DNA repair protein-like
[Arabidopsis thaliana] gi|332007595|gb|AED94978.1|
Helicase protein with RING/U-box domain [Arabidopsis
thaliana]
Length = 1277
Score = 95.5 bits (236), Expect = 7e-18
Identities = 49/54 (90%), Positives = 52/54 (96%)
Frame = +2
Query: 2 GQKRTVRVRRFIVKDTVEERLQQVQARKQRMIAGALTNEEVRSARIEELNMLFR 163
GQKRTV VRRFIVKDTVEER+QQVQARKQRMIAGALT+EEVRSAR+EEL MLFR
Sbjct: 1224 GQKRTVFVRRFIVKDTVEERMQQVQARKQRMIAGALTDEEVRSARLEELKMLFR 1277
>ref|XP_002865418.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297311253|gb|EFH41677.1| SNF2 domain-containing
protein [Arabidopsis lyrata subsp. lyrata]
Length = 1305
Score = 95.5 bits (236), Expect = 7e-18
Identities = 49/54 (90%), Positives = 52/54 (96%)
Frame = +2
Query: 2 GQKRTVRVRRFIVKDTVEERLQQVQARKQRMIAGALTNEEVRSARIEELNMLFR 163
GQKRTV VRRFIVKDTVEER+QQVQARKQRMIAGALT+EEVRSAR+EEL MLFR
Sbjct: 1252 GQKRTVFVRRFIVKDTVEERMQQVQARKQRMIAGALTDEEVRSARLEELKMLFR 1305
>ref|XP_004234234.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 3-like 3-like
[Solanum lycopersicum]
Length = 1120
Score = 95.1 bits (235), Expect = 9e-18
Identities = 48/54 (88%), Positives = 52/54 (96%)
Frame = +2
Query: 2 GQKRTVRVRRFIVKDTVEERLQQVQARKQRMIAGALTNEEVRSARIEELNMLFR 163
GQK+ VRVRRFIVKDTVEER+QQVQARKQRMIAGALT+EEVRSAR+EEL MLFR
Sbjct: 1067 GQKKIVRVRRFIVKDTVEERMQQVQARKQRMIAGALTDEEVRSARLEELKMLFR 1120
>ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 3-like 3-like
[Vitis vinifera]
Length = 1224
Score = 95.1 bits (235), Expect = 9e-18
Identities = 48/54 (88%), Positives = 52/54 (96%)
Frame = +2
Query: 2 GQKRTVRVRRFIVKDTVEERLQQVQARKQRMIAGALTNEEVRSARIEELNMLFR 163
GQ+RTVRVRRFIVKDTVEER+QQVQARKQRMI GALT+EEVR+ARIEEL MLFR
Sbjct: 1171 GQERTVRVRRFIVKDTVEERMQQVQARKQRMITGALTDEEVRTARIEELKMLFR 1224
>emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera]
Length = 1249
Score = 95.1 bits (235), Expect = 9e-18
Identities = 48/54 (88%), Positives = 52/54 (96%)
Frame = +2
Query: 2 GQKRTVRVRRFIVKDTVEERLQQVQARKQRMIAGALTNEEVRSARIEELNMLFR 163
GQ+RTVRVRRFIVKDTVEER+QQVQARKQRMI GALT+EEVR+ARIEEL MLFR
Sbjct: 1196 GQERTVRVRRFIVKDTVEERMQQVQARKQRMITGALTDEEVRTARIEELKMLFR 1249
>gb|EOY05973.1| Helicase protein with RING/U-box domain [Theobroma cacao]
Length = 1125
Score = 94.0 bits (232), Expect = 2e-17
Identities = 48/54 (88%), Positives = 51/54 (94%)
Frame = +2
Query: 2 GQKRTVRVRRFIVKDTVEERLQQVQARKQRMIAGALTNEEVRSARIEELNMLFR 163
GQKR V VRRFIVKDTVEER+QQVQARKQ+MIAGALT+EEVRSARIEEL MLFR
Sbjct: 1072 GQKRAVSVRRFIVKDTVEERMQQVQARKQKMIAGALTDEEVRSARIEELQMLFR 1125
>gb|EMS62933.1| Putative SWI/SNF-related matrix-associated actin-dependent regulator
of chromatin subfamily A member 3-like 3 [Triticum
urartu]
Length = 965
Score = 93.6 bits (231), Expect = 2e-17
Identities = 47/54 (87%), Positives = 52/54 (96%)
Frame = +2
Query: 2 GQKRTVRVRRFIVKDTVEERLQQVQARKQRMIAGALTNEEVRSARIEELNMLFR 163
GQKR V+VRRFIVKDTVEER+QQVQARKQRMIAGALT+EEVRS+RIEEL MLF+
Sbjct: 912 GQKRAVQVRRFIVKDTVEERMQQVQARKQRMIAGALTDEEVRSSRIEELKMLFK 965
>gb|EMT07824.1| Putative SWI/SNF-related matrix-associated actin-dependent regulator
of chromatin subfamily A member 3-like protein 3
[Aegilops tauschii]
Length = 912
Score = 93.2 bits (230), Expect = 3e-17
Identities = 47/54 (87%), Positives = 51/54 (94%)
Frame = +2
Query: 2 GQKRTVRVRRFIVKDTVEERLQQVQARKQRMIAGALTNEEVRSARIEELNMLFR 163
GQKR V VRRFIVKDTVEER+QQVQARKQRMIAGALT+EEVRS+RIEEL MLF+
Sbjct: 859 GQKRAVHVRRFIVKDTVEERMQQVQARKQRMIAGALTDEEVRSSRIEELKMLFK 912
>ref|XP_004297995.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 3-like 3-like
[Fragaria vesca subsp. vesca]
Length = 1231
Score = 93.2 bits (230), Expect = 3e-17
Identities = 49/53 (92%), Positives = 50/53 (94%)
Frame = +2
Query: 2 GQKRTVRVRRFIVKDTVEERLQQVQARKQRMIAGALTNEEVRSARIEELNMLF 160
GQKRTV VRRFIVKDTVEERL QVQARKQRMIAGALT+EEVRSARIEEL MLF
Sbjct: 1178 GQKRTVTVRRFIVKDTVEERLLQVQARKQRMIAGALTDEEVRSARIEELKMLF 1230
>ref|XP_006279560.1| hypothetical protein CARUB_v10025760mg [Capsella rubella]
gi|482548264|gb|EOA12458.1| hypothetical protein
CARUB_v10025760mg [Capsella rubella]
Length = 1196
Score = 92.8 bits (229), Expect = 4e-17
Identities = 48/54 (88%), Positives = 51/54 (94%)
Frame = +2
Query: 2 GQKRTVRVRRFIVKDTVEERLQQVQARKQRMIAGALTNEEVRSARIEELNMLFR 163
GQKRTV VRRFIVK TVEER+QQVQARKQRMIAGALT+EEVRSAR+EEL MLFR
Sbjct: 1143 GQKRTVCVRRFIVKGTVEERMQQVQARKQRMIAGALTDEEVRSARLEELKMLFR 1196
>gb|EXB98159.1| SMARCA3-like protein 3 [Morus notabilis]
Length = 1373
Score = 92.4 bits (228), Expect = 6e-17
Identities = 47/54 (87%), Positives = 51/54 (94%)
Frame = +2
Query: 2 GQKRTVRVRRFIVKDTVEERLQQVQARKQRMIAGALTNEEVRSARIEELNMLFR 163
GQKRTV VRRFIVKDT+EER+QQVQARKQR+IAGALT+EEVR ARIEEL MLFR
Sbjct: 1320 GQKRTVSVRRFIVKDTLEERMQQVQARKQRLIAGALTDEEVRYARIEELKMLFR 1373
>ref|XP_006385564.1| hypothetical protein POPTR_0003s08160g [Populus trichocarpa]
gi|550342691|gb|ERP63361.1| hypothetical protein
POPTR_0003s08160g [Populus trichocarpa]
Length = 937
Score = 92.0 bits (227), Expect = 7e-17
Identities = 48/54 (88%), Positives = 51/54 (94%)
Frame = +2
Query: 2 GQKRTVRVRRFIVKDTVEERLQQVQARKQRMIAGALTNEEVRSARIEELNMLFR 163
GQKRTV VRRFIV+ TVEERLQQVQA+KQRMIAGALT+EEVRSARIEEL MLFR
Sbjct: 884 GQKRTVFVRRFIVESTVEERLQQVQAKKQRMIAGALTDEEVRSARIEELKMLFR 937
>gb|EMJ26646.1| hypothetical protein PRUPE_ppa000367mg [Prunus persica]
Length = 1241
Score = 91.7 bits (226), Expect = 9e-17
Identities = 47/53 (88%), Positives = 51/53 (96%)
Frame = +2
Query: 2 GQKRTVRVRRFIVKDTVEERLQQVQARKQRMIAGALTNEEVRSARIEELNMLF 160
GQKRTV VRRFIVKD+VEER+QQVQARKQ+MIAGALT+EEVRSARIEEL MLF
Sbjct: 1188 GQKRTVVVRRFIVKDSVEERMQQVQARKQKMIAGALTDEEVRSARIEELKMLF 1240
>ref|XP_002867887.1| hypothetical protein ARALYDRAFT_914628 [Arabidopsis lyrata subsp.
lyrata] gi|297313723|gb|EFH44146.1| hypothetical protein
ARALYDRAFT_914628 [Arabidopsis lyrata subsp. lyrata]
Length = 94
Score = 91.3 bits (225), Expect = 1e-16
Identities = 47/54 (87%), Positives = 50/54 (92%)
Frame = +2
Query: 2 GQKRTVRVRRFIVKDTVEERLQQVQARKQRMIAGALTNEEVRSARIEELNMLFR 163
GQKRTV VRRFIVKDTVEER+QQVQARKQRMI GALT+EEVRS R+EEL MLFR
Sbjct: 41 GQKRTVFVRRFIVKDTVEERMQQVQARKQRMIDGALTDEEVRSERLEELKMLFR 94
>emb|CBI23583.3| unnamed protein product [Vitis vinifera]
Length = 1287
Score = 90.9 bits (224), Expect = 2e-16
Identities = 46/52 (88%), Positives = 50/52 (96%)
Frame = +2
Query: 2 GQKRTVRVRRFIVKDTVEERLQQVQARKQRMIAGALTNEEVRSARIEELNML 157
GQ+RTVRVRRFIVKDTVEER+QQVQARKQRMI GALT+EEVR+ARIEEL ML
Sbjct: 1140 GQERTVRVRRFIVKDTVEERMQQVQARKQRMITGALTDEEVRTARIEELKML 1191
>ref|XP_002329602.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 148
Score = 90.1 bits (222), Expect = 3e-16
Identities = 47/53 (88%), Positives = 50/53 (94%)
Frame = +2
Query: 2 GQKRTVRVRRFIVKDTVEERLQQVQARKQRMIAGALTNEEVRSARIEELNMLF 160
GQKRTV VRRFIV+ TVEERLQQVQA+KQRMIAGALT+EEVRSARIEEL MLF
Sbjct: 96 GQKRTVFVRRFIVESTVEERLQQVQAKKQRMIAGALTDEEVRSARIEELKMLF 148
>ref|XP_006653171.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 3-like 3-like
[Oryza brachyantha]
Length = 1138
Score = 88.6 bits (218), Expect = 8e-16
Identities = 44/53 (83%), Positives = 50/53 (94%)
Frame = +2
Query: 2 GQKRTVRVRRFIVKDTVEERLQQVQARKQRMIAGALTNEEVRSARIEELNMLF 160
GQKR V+VRRFIVKDTVEER+Q VQARKQRMI+GALT++EVRSARIE+L MLF
Sbjct: 1085 GQKRAVQVRRFIVKDTVEERMQNVQARKQRMISGALTDDEVRSARIEQLKMLF 1137