BLASTX nr result
ID: Catharanthus22_contig00013377
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00013377
(2100 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006352332.1| PREDICTED: pentatricopeptide repeat-containi... 119 5e-24
gb|EMJ05969.1| hypothetical protein PRUPE_ppa015604mg [Prunus pe... 101 1e-18
ref|XP_006383060.1| pentatricopeptide repeat-containing family p... 98 2e-17
ref|XP_002327644.1| predicted protein [Populus trichocarpa] 98 2e-17
emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera] 97 4e-17
ref|XP_006425390.1| hypothetical protein CICLE_v10027592mg [Citr... 94 2e-16
gb|EXC35313.1| hypothetical protein L484_026636 [Morus notabilis] 93 5e-16
gb|ESW29877.1| hypothetical protein PHAVU_002G106000g [Phaseolus... 91 2e-15
ref|XP_003516541.1| PREDICTED: pentatricopeptide repeat-containi... 91 3e-15
ref|XP_003612228.1| Pentatricopeptide repeat-containing protein ... 90 3e-15
ref|XP_004158900.1| PREDICTED: pentatricopeptide repeat-containi... 88 2e-14
ref|XP_004135020.1| PREDICTED: pentatricopeptide repeat-containi... 88 2e-14
ref|XP_004250558.1| PREDICTED: pentatricopeptide repeat-containi... 87 3e-14
ref|XP_004512166.1| PREDICTED: pentatricopeptide repeat-containi... 86 8e-14
ref|XP_006857380.1| hypothetical protein AMTR_s00067p00130250 [A... 79 1e-11
ref|XP_006403930.1| hypothetical protein EUTSA_v10010283mg [Eutr... 76 7e-11
ref|NP_190700.2| pentatricopeptide repeat-containing protein [Ar... 76 7e-11
emb|CAB62654.1| putative protein [Arabidopsis thaliana] 76 7e-11
ref|XP_002877796.1| binding protein [Arabidopsis lyrata subsp. l... 75 1e-10
ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containi... 72 7e-10
>ref|XP_006352332.1| PREDICTED: pentatricopeptide repeat-containing protein At3g51320-like
isoform X1 [Solanum tuberosum]
gi|565371484|ref|XP_006352333.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g51320-like isoform X2 [Solanum tuberosum]
Length = 534
Score = 119 bits (298), Expect = 5e-24
Identities = 53/95 (55%), Positives = 72/95 (75%)
Frame = -2
Query: 1814 IFRCIQFPSPFCVNTMIKACSCSSVPHMAMLLYIERRKDGFCPNSFSFPSLVSAYSKMGI 1635
+F+CI FP F VNT+IKA +CSS+P A++ Y +R K+GF PNSF+FP L+SA ++ G
Sbjct: 87 VFKCIHFPDTFSVNTVIKAYACSSLPDNAVVFYFQRLKNGFLPNSFTFPPLMSACARRGR 146
Query: 1634 LNLGRQCHGQAAKNEFDFVLLVQNSMLHFYACVGF 1530
L+ G++CHGQ KN D VL VQNS++HFY+C GF
Sbjct: 147 LDSGQKCHGQVVKNGVDGVLQVQNSLVHFYSCCGF 181
>gb|EMJ05969.1| hypothetical protein PRUPE_ppa015604mg [Prunus persica]
Length = 568
Score = 101 bits (251), Expect = 1e-18
Identities = 45/90 (50%), Positives = 63/90 (70%)
Frame = -2
Query: 1814 IFRCIQFPSPFCVNTMIKACSCSSVPHMAMLLYIERRKDGFCPNSFSFPSLVSAYSKMGI 1635
IFRCI P FCVNT+IKA S SS+P A+++Y E ++GF P S++F L+ + +KMG
Sbjct: 101 IFRCIDLPGTFCVNTVIKAYSVSSMPDQALVVYFEWLRNGFAPTSYTFVPLIGSCAKMGS 160
Query: 1634 LNLGRQCHGQAAKNEFDFVLLVQNSMLHFY 1545
+ GR+CHGQ K+ D +L VQNS++H Y
Sbjct: 161 VESGRKCHGQVVKHGLDSLLQVQNSLIHMY 190
>ref|XP_006383060.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550338637|gb|ERP60857.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 564
Score = 97.8 bits (242), Expect = 2e-17
Identities = 48/100 (48%), Positives = 65/100 (65%)
Frame = -2
Query: 1814 IFRCIQFPSPFCVNTMIKACSCSSVPHMAMLLYIERRKDGFCPNSFSFPSLVSAYSKMGI 1635
IF+ I P F VN ++KA S SS P+ A++ Y E K GFCPNS++F SL +K+G
Sbjct: 103 IFKFIASPGTFVVNNVVKAYSLSSEPNKALVFYFEMLKSGFCPNSYTFVSLFGCCAKVGC 162
Query: 1634 LNLGRQCHGQAAKNEFDFVLLVQNSMLHFYACVGFDAGLS 1515
LG++ HGQA KN D +L V+NS++H Y C G D GL+
Sbjct: 163 AKLGKKYHGQAVKNGVDRILPVENSLIHCYGCCG-DMGLA 201
>ref|XP_002327644.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 97.8 bits (242), Expect = 2e-17
Identities = 48/100 (48%), Positives = 65/100 (65%)
Frame = -2
Query: 1814 IFRCIQFPSPFCVNTMIKACSCSSVPHMAMLLYIERRKDGFCPNSFSFPSLVSAYSKMGI 1635
IF+ I P F VN ++KA S SS P+ A++ Y E K GFCPNS++F SL +K+G
Sbjct: 103 IFKFIASPGTFVVNNVVKAYSLSSEPNKALVFYFEMLKSGFCPNSYTFVSLFGCCAKVGC 162
Query: 1634 LNLGRQCHGQAAKNEFDFVLLVQNSMLHFYACVGFDAGLS 1515
LG++ HGQA KN D +L V+NS++H Y C G D GL+
Sbjct: 163 AKLGKKYHGQAVKNGVDRILPVENSLIHCYGCCG-DMGLA 201
>emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera]
Length = 901
Score = 96.7 bits (239), Expect = 4e-17
Identities = 49/94 (52%), Positives = 58/94 (61%)
Frame = -2
Query: 1814 IFRCIQFPSPFCVNTMIKACSCSSVPHMAMLLYIERRKDGFCPNSFSFPSLVSAYSKMGI 1635
IFR I P CVN +IKA S SSV H A++ Y E ++GF NSF+FP L S K G
Sbjct: 426 IFRSIDSPDTVCVNAVIKAYSISSVAHQALVFYFETLRNGFMCNSFTFPPLFSCCRKXGC 485
Query: 1634 LNLGRQCHGQAAKNEFDFVLLVQNSMLHFYACVG 1533
+ G + HGQA KN D VL VQNSM+H Y C G
Sbjct: 486 VEYGEKFHGQAIKNGVDNVLDVQNSMVHMYGCCG 519
>ref|XP_006425390.1| hypothetical protein CICLE_v10027592mg [Citrus clementina]
gi|557527380|gb|ESR38630.1| hypothetical protein
CICLE_v10027592mg [Citrus clementina]
Length = 563
Score = 94.0 bits (232), Expect = 2e-16
Identities = 43/94 (45%), Positives = 59/94 (62%)
Frame = -2
Query: 1814 IFRCIQFPSPFCVNTMIKACSCSSVPHMAMLLYIERRKDGFCPNSFSFPSLVSAYSKMGI 1635
+F+CI P FCVN ++KA S S VP A++ Y + K+GF PNS++F SL + +K G
Sbjct: 103 VFKCINNPGTFCVNAVVKAYSNSCVPDQAVVFYFQMIKNGFMPNSYTFVSLFGSCAKTGC 162
Query: 1634 LNLGRQCHGQAAKNEFDFVLLVQNSMLHFYACVG 1533
+ G CHG A KN DF L V NS+++ Y C G
Sbjct: 163 VERGGMCHGLALKNGVDFELPVMNSLINMYGCFG 196
>gb|EXC35313.1| hypothetical protein L484_026636 [Morus notabilis]
Length = 577
Score = 92.8 bits (229), Expect = 5e-16
Identities = 41/94 (43%), Positives = 59/94 (62%)
Frame = -2
Query: 1814 IFRCIQFPSPFCVNTMIKACSCSSVPHMAMLLYIERRKDGFCPNSFSFPSLVSAYSKMGI 1635
IFR I FP FCVNT+++A S + A++ Y E ++GF PNS++F +++ +K+G
Sbjct: 98 IFRYIDFPGAFCVNTVLRAYSVGFDSNQALIFYFESLRNGFSPNSYTFVTVLGCCAKLGS 157
Query: 1634 LNLGRQCHGQAAKNEFDFVLLVQNSMLHFYACVG 1533
L G C GQA KN D L +QNS++H Y C G
Sbjct: 158 LESGEMCRGQAIKNGVDSALQIQNSLIHMYGCCG 191
>gb|ESW29877.1| hypothetical protein PHAVU_002G106000g [Phaseolus vulgaris]
Length = 583
Score = 90.9 bits (224), Expect = 2e-15
Identities = 43/94 (45%), Positives = 57/94 (60%)
Frame = -2
Query: 1814 IFRCIQFPSPFCVNTMIKACSCSSVPHMAMLLYIERRKDGFCPNSFSFPSLVSAYSKMGI 1635
IFR I FCVNT+I A S PH ++ Y GF PNS++F LV + ++ G
Sbjct: 99 IFRHINSSDTFCVNTVIHAYCDSDAPHQTVIFYFRSLMRGFFPNSYTFVPLVGSCARTGC 158
Query: 1634 LNLGRQCHGQAAKNEFDFVLLVQNSMLHFYACVG 1533
++ G++CH QA KN D VL VQNS++H YAC G
Sbjct: 159 VDSGKECHAQATKNGVDSVLPVQNSLIHMYACCG 192
>ref|XP_003516541.1| PREDICTED: pentatricopeptide repeat-containing protein At3g51320-like
[Glycine max]
Length = 579
Score = 90.5 bits (223), Expect = 3e-15
Identities = 44/94 (46%), Positives = 58/94 (61%)
Frame = -2
Query: 1814 IFRCIQFPSPFCVNTMIKACSCSSVPHMAMLLYIERRKDGFCPNSFSFPSLVSAYSKMGI 1635
IFR I FCVN +I+A S S P A++ Y GF PNS++F LV++ +KMG
Sbjct: 95 IFRSINSLDTFCVNIVIQAYSNSHAPREAIVFYFRSLMRGFFPNSYTFVPLVASCAKMGC 154
Query: 1634 LNLGRQCHGQAAKNEFDFVLLVQNSMLHFYACVG 1533
+ G++CH QA KN D VL VQNS++H Y C G
Sbjct: 155 IGSGKECHAQATKNGVDSVLPVQNSLIHMYVCCG 188
>ref|XP_003612228.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513563|gb|AES95186.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 665
Score = 90.1 bits (222), Expect = 3e-15
Identities = 43/85 (50%), Positives = 56/85 (65%)
Frame = -2
Query: 1784 FCVNTMIKACSCSSVPHMAMLLYIERRKDGFCPNSFSFPSLVSAYSKMGILNLGRQCHGQ 1605
FCVNT+I + S VPH A++ Y K GF NS++F SL+SA SKM ++ G+ CHGQ
Sbjct: 103 FCVNTVINSYCNSYVPHKAIVFYFSSLKIGFFANSYTFVSLISACSKMSCVDNGKMCHGQ 162
Query: 1604 AAKNEFDFVLLVQNSMLHFYACVGF 1530
A KN DFVL V+NS+ H Y G+
Sbjct: 163 AVKNGVDFVLPVENSLAHMYGSCGY 187
>ref|XP_004158900.1| PREDICTED: pentatricopeptide repeat-containing protein At3g51320-like
[Cucumis sativus]
Length = 547
Score = 87.8 bits (216), Expect = 2e-14
Identities = 44/92 (47%), Positives = 61/92 (66%)
Frame = -2
Query: 1814 IFRCIQFPSPFCVNTMIKACSCSSVPHMAMLLYIERRKDGFCPNSFSFPSLVSAYSKMGI 1635
IFR I+ P+ FCVN +IKA S S+VP A+ +Y E +G P+S++F SL SA + G
Sbjct: 104 IFRHIKVPNTFCVNRVIKAYSLSTVPLEAVFVYFEWLGNGLRPDSYTFLSLFSACASFGC 163
Query: 1634 LNLGRQCHGQAAKNEFDFVLLVQNSMLHFYAC 1539
GR+CHGQA KN D V+++ NS++H Y C
Sbjct: 164 GASGRKCHGQAFKNGVDSVMVLGNSLIHMYGC 195
>ref|XP_004135020.1| PREDICTED: pentatricopeptide repeat-containing protein At3g51320-like
[Cucumis sativus]
Length = 575
Score = 87.8 bits (216), Expect = 2e-14
Identities = 44/92 (47%), Positives = 61/92 (66%)
Frame = -2
Query: 1814 IFRCIQFPSPFCVNTMIKACSCSSVPHMAMLLYIERRKDGFCPNSFSFPSLVSAYSKMGI 1635
IFR I+ P+ FCVN +IKA S S+VP A+ +Y E +G P+S++F SL SA + G
Sbjct: 103 IFRHIKVPNTFCVNRVIKAYSLSTVPLEAVFVYFEWLGNGLRPDSYTFLSLFSACASFGC 162
Query: 1634 LNLGRQCHGQAAKNEFDFVLLVQNSMLHFYAC 1539
GR+CHGQA KN D V+++ NS++H Y C
Sbjct: 163 GASGRKCHGQAFKNGVDSVMVLGNSLIHMYGC 194
>ref|XP_004250558.1| PREDICTED: pentatricopeptide repeat-containing protein At3g51320-like
[Solanum lycopersicum]
Length = 195
Score = 87.0 bits (214), Expect = 3e-14
Identities = 39/72 (54%), Positives = 54/72 (75%)
Frame = -2
Query: 1745 SVPHMAMLLYIERRKDGFCPNSFSFPSLVSAYSKMGILNLGRQCHGQAAKNEFDFVLLVQ 1566
++P A++ Y +R K+GF PNSF+FP L+SA +K G L+ G++CHGQ KN D VL VQ
Sbjct: 36 TLPDNAVVFYYQRLKNGFLPNSFTFPPLMSACAKTGSLDSGQKCHGQVMKNGVDGVLQVQ 95
Query: 1565 NSMLHFYACVGF 1530
NS++HFY+C GF
Sbjct: 96 NSIVHFYSCCGF 107
>ref|XP_004512166.1| PREDICTED: pentatricopeptide repeat-containing protein At3g51320-like
[Cicer arietinum]
Length = 598
Score = 85.5 bits (210), Expect = 8e-14
Identities = 41/84 (48%), Positives = 55/84 (65%)
Frame = -2
Query: 1784 FCVNTMIKACSCSSVPHMAMLLYIERRKDGFCPNSFSFPSLVSAYSKMGILNLGRQCHGQ 1605
FCVNT+I + S VP+ A++ Y + K F PNS++F L+ + S MG ++ GR CH Q
Sbjct: 115 FCVNTVINSYCNSYVPNKAIVFYFQSLKIRFFPNSYTFVPLIGSCSNMGCVDSGRMCHAQ 174
Query: 1604 AAKNEFDFVLLVQNSMLHFYACVG 1533
A KN DFVL VQNS++H YA G
Sbjct: 175 AVKNGVDFVLPVQNSLVHMYASCG 198
>ref|XP_006857380.1| hypothetical protein AMTR_s00067p00130250 [Amborella trichopoda]
gi|548861473|gb|ERN18847.1| hypothetical protein
AMTR_s00067p00130250 [Amborella trichopoda]
Length = 823
Score = 78.6 bits (192), Expect = 1e-11
Identities = 46/122 (37%), Positives = 63/122 (51%)
Frame = -2
Query: 1847 CLSMGFFNYN*IFRCIQFPSPFCVNTMIKACSCSSVPHMAMLLYIERRKDGFCPNSFSFP 1668
CLS +FR + P NT+IKA S SS P A+ Y E G PN+F+FP
Sbjct: 70 CLSYALM----VFRQLNSPELRAYNTIIKALSLSSDPIQAISFYHEMVLKGVHPNNFTFP 125
Query: 1667 SLVSAYSKMGILNLGRQCHGQAAKNEFDFVLLVQNSMLHFYACVGFDAGLSSNFNVFVYG 1488
LV++ +K+ +N G +CH + K FD V+ V NS++H YAC + F V
Sbjct: 126 PLVASCAKVTAINEGEKCHTEVVKRGFDQVIFVANSLVHMYACFKLISYARQVFYEMVER 185
Query: 1487 DF 1482
DF
Sbjct: 186 DF 187
>ref|XP_006403930.1| hypothetical protein EUTSA_v10010283mg [Eutrema salsugineum]
gi|557105049|gb|ESQ45383.1| hypothetical protein
EUTSA_v10010283mg [Eutrema salsugineum]
Length = 529
Score = 75.9 bits (185), Expect = 7e-11
Identities = 36/84 (42%), Positives = 49/84 (58%)
Frame = -2
Query: 1784 FCVNTMIKACSCSSVPHMAMLLYIERRKDGFCPNSFSFPSLVSAYSKMGILNLGRQCHGQ 1605
+C N + KA SS P A+ Y + RK GF P+++SF L K ++ G+ CHGQ
Sbjct: 84 YCANPVFKAYLLSSTPQQALGFYFDIRKCGFVPDTYSFVPLFGCIEKTCCVDSGKMCHGQ 143
Query: 1604 AAKNEFDFVLLVQNSMLHFYACVG 1533
A K+ D VL VQNS++H Y C G
Sbjct: 144 AIKHGCDQVLPVQNSLMHMYTCCG 167
>ref|NP_190700.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122230198|sp|Q0WVU0.1|PP278_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g51320 gi|110741620|dbj|BAE98758.1| hypothetical
protein [Arabidopsis thaliana]
gi|332645257|gb|AEE78778.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 530
Score = 75.9 bits (185), Expect = 7e-11
Identities = 36/84 (42%), Positives = 51/84 (60%)
Frame = -2
Query: 1784 FCVNTMIKACSCSSVPHMAMLLYIERRKDGFCPNSFSFPSLVSAYSKMGILNLGRQCHGQ 1605
+C N + KA SS P A+ Y + + GF P+S++F SL+S K ++ G+ CHGQ
Sbjct: 84 YCANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQ 143
Query: 1604 AAKNEFDFVLLVQNSMLHFYACVG 1533
A K+ D VL VQNS++H Y C G
Sbjct: 144 AIKHGCDQVLPVQNSLMHMYTCCG 167
>emb|CAB62654.1| putative protein [Arabidopsis thaliana]
Length = 486
Score = 75.9 bits (185), Expect = 7e-11
Identities = 36/84 (42%), Positives = 51/84 (60%)
Frame = -2
Query: 1784 FCVNTMIKACSCSSVPHMAMLLYIERRKDGFCPNSFSFPSLVSAYSKMGILNLGRQCHGQ 1605
+C N + KA SS P A+ Y + + GF P+S++F SL+S K ++ G+ CHGQ
Sbjct: 61 YCANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQ 120
Query: 1604 AAKNEFDFVLLVQNSMLHFYACVG 1533
A K+ D VL VQNS++H Y C G
Sbjct: 121 AIKHGCDQVLPVQNSLMHMYTCCG 144
>ref|XP_002877796.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297323634|gb|EFH54055.1| binding protein [Arabidopsis
lyrata subsp. lyrata]
Length = 530
Score = 75.1 bits (183), Expect = 1e-10
Identities = 36/84 (42%), Positives = 51/84 (60%)
Frame = -2
Query: 1784 FCVNTMIKACSCSSVPHMAMLLYIERRKDGFCPNSFSFPSLVSAYSKMGILNLGRQCHGQ 1605
+C N + KA SS P A+ Y + + GF P++++F SLVS K ++ G+ CHGQ
Sbjct: 84 YCANPVFKAYLVSSSPKQALGFYFDILRFGFVPDTYTFVSLVSCIEKTCCVDSGKMCHGQ 143
Query: 1604 AAKNEFDFVLLVQNSMLHFYACVG 1533
A K+ D VL VQNS++H Y C G
Sbjct: 144 AIKHGCDQVLPVQNSLIHMYTCCG 167
>ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein At5g06540-like
[Vitis vinifera]
Length = 623
Score = 72.4 bits (176), Expect = 7e-10
Identities = 38/110 (34%), Positives = 59/110 (53%)
Frame = -2
Query: 1814 IFRCIQFPSPFCVNTMIKACSCSSVPHMAMLLYIERRKDGFCPNSFSFPSLVSAYSKMGI 1635
IF IQ P+ F N MI+ S S P A Y++ ++ G P++ +FP LV + +K+
Sbjct: 75 IFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHC 134
Query: 1634 LNLGRQCHGQAAKNEFDFVLLVQNSMLHFYACVGFDAGLSSNFNVFVYGD 1485
+++G Q HG K+ F+ + VQNS++H YA G + F Y D
Sbjct: 135 ISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVD 184