BLASTX nr result
ID: Catharanthus22_contig00013026
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00013026
(1056 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY18724.1| Pumilio 4 isoform 3 [Theobroma cacao] 130 7e-28
gb|EOY18723.1| Pumilio 4 isoform 2 [Theobroma cacao] 130 7e-28
gb|EOY18722.1| Pumilio 4 isoform 1 [Theobroma cacao] 130 7e-28
ref|XP_002273503.1| PREDICTED: pumilio homolog 4 [Vitis vinifera... 125 2e-26
ref|XP_006436466.1| hypothetical protein CICLE_v10030594mg [Citr... 115 3e-23
gb|EXC32919.1| Pumilio-4-like protein [Morus notabilis] 114 5e-23
ref|XP_002530940.1| pumilio, putative [Ricinus communis] gi|2235... 105 3e-20
ref|XP_006589409.1| PREDICTED: pumilio homolog 4-like isoform X2... 96 2e-17
ref|XP_004496247.1| PREDICTED: pumilio homolog 4-like isoform X5... 93 2e-16
ref|XP_004496245.1| PREDICTED: pumilio homolog 4-like isoform X3... 93 2e-16
gb|EMJ21481.1| hypothetical protein PRUPE_ppa000731mg [Prunus pe... 93 2e-16
ref|XP_006589408.1| PREDICTED: pumilio homolog 4-like isoform X1... 91 6e-16
ref|XP_004496246.1| PREDICTED: pumilio homolog 4-like isoform X4... 91 8e-16
ref|XP_004496243.1| PREDICTED: pumilio homolog 4-like isoform X1... 91 8e-16
ref|XP_006606263.1| PREDICTED: pumilio homolog 4-like isoform X3... 91 1e-15
ref|XP_003591862.1| 60S ribosomal protein L4 [Medicago truncatul... 90 2e-15
ref|XP_002311080.2| hypothetical protein POPTR_0008s03630g [Popu... 89 2e-15
ref|XP_004307367.1| PREDICTED: pumilio homolog 4-like [Fragaria ... 89 4e-15
ref|XP_006606261.1| PREDICTED: pumilio homolog 4-like isoform X1... 86 2e-14
ref|XP_002316382.2| pumilio/Puf RNA-binding domain-containing fa... 85 4e-14
>gb|EOY18724.1| Pumilio 4 isoform 3 [Theobroma cacao]
Length = 767
Score = 130 bits (328), Expect = 7e-28
Identities = 130/416 (31%), Positives = 194/416 (46%), Gaps = 66/416 (15%)
Frame = -2
Query: 1055 RKTALRNLSRKSSTE-------SLAALGGMPMKSGMGMRRKSFADIVQEGPGQSSASPHR 897
R T RN SRK S E L L G +G+G RRKSFADI+Q+G + +
Sbjct: 179 RNTNARNTSRKMSAEWLDRGSDGLVGLSG----TGLGARRKSFADILQDGLDRPATLSGH 234
Query: 896 LSRPPSYNSFSEMLDTADILNTSSSTDSLHK-TESFEAL-----HPIQXXXXXXXXXXXP 735
LS+P S N+FS+MLD A I S H ES E+L P
Sbjct: 235 LSQPSSRNAFSDMLDAASI--ADPSPPGFHNAAESIESLPAGVARPGVVGVQSHGKTTSH 292
Query: 734 NSFSGAGSSSTKTRTAEPHSSLRSP-PGFPAVRSQVPVDGEQNIARSN-PHVSPSGKTQI 561
+ S GSS +++ T EP+ RS G P V S+V ++NI SN + S T++
Sbjct: 293 SFASAVGSSLSRSTTPEPYLVGRSSGSGLPPVGSKVGHAEKKNIIGSNVQNGHSSAVTEL 352
Query: 560 SDILTSFQGLSLSKD-HANENALLQSA----------FEMGLSKANIQNLQQQ-LNKSRA 417
S+I + GL+LSK HA+EN+ ++S F + + Q+LQQQ ++KS A
Sbjct: 353 SEIGATLSGLTLSKTRHADENSHMRSQLQVDLDNQLDFSFNMPNGHNQSLQQQFIDKSSA 412
Query: 416 DKYVPP--YIGFARENGVVPDVNYLNF--DRQVNLPRRTSSSVNLRSLANSSEFSVLQD- 252
+K P +I AR+ G+ P++N N + QV++P+RTSSS +L + + S L+
Sbjct: 413 EKLAFPTNHIDLARKKGIAPNINAYNISSNGQVSIPKRTSSSADLYAKVHPSGLGSLEVC 472
Query: 251 ---------PKNKYQGSHSSSYNLNXXXXXXXXXXGHSNIHSP----------------- 150
+ G S+Y++N H N SP
Sbjct: 473 DVGHPNVNLANTDFIGQLPSAYSVN--QKLNSAIKNHLNAGSPLTGTGDRQSLNRAGNQG 530
Query: 149 --------DAHHDEFLEQSTNYASQAAATLRSLSQGRNCIGTSHGFVDLQYLERIY 6
D + ++L++++ Y ++AAA+ SL G N +GT HG DL L++ Y
Sbjct: 531 ADLLSPLMDPRYIQYLQRTSQYGARAAASPDSLLSG-NYVGTLHG--DLDGLQKAY 583
>gb|EOY18723.1| Pumilio 4 isoform 2 [Theobroma cacao]
Length = 907
Score = 130 bits (328), Expect = 7e-28
Identities = 130/416 (31%), Positives = 194/416 (46%), Gaps = 66/416 (15%)
Frame = -2
Query: 1055 RKTALRNLSRKSSTE-------SLAALGGMPMKSGMGMRRKSFADIVQEGPGQSSASPHR 897
R T RN SRK S E L L G +G+G RRKSFADI+Q+G + +
Sbjct: 179 RNTNARNTSRKMSAEWLDRGSDGLVGLSG----TGLGARRKSFADILQDGLDRPATLSGH 234
Query: 896 LSRPPSYNSFSEMLDTADILNTSSSTDSLHK-TESFEAL-----HPIQXXXXXXXXXXXP 735
LS+P S N+FS+MLD A I S H ES E+L P
Sbjct: 235 LSQPSSRNAFSDMLDAASI--ADPSPPGFHNAAESIESLPAGVARPGVVGVQSHGKTTSH 292
Query: 734 NSFSGAGSSSTKTRTAEPHSSLRSP-PGFPAVRSQVPVDGEQNIARSN-PHVSPSGKTQI 561
+ S GSS +++ T EP+ RS G P V S+V ++NI SN + S T++
Sbjct: 293 SFASAVGSSLSRSTTPEPYLVGRSSGSGLPPVGSKVGHAEKKNIIGSNVQNGHSSAVTEL 352
Query: 560 SDILTSFQGLSLSKD-HANENALLQSA----------FEMGLSKANIQNLQQQ-LNKSRA 417
S+I + GL+LSK HA+EN+ ++S F + + Q+LQQQ ++KS A
Sbjct: 353 SEIGATLSGLTLSKTRHADENSHMRSQLQVDLDNQLDFSFNMPNGHNQSLQQQFIDKSSA 412
Query: 416 DKYVPP--YIGFARENGVVPDVNYLNF--DRQVNLPRRTSSSVNLRSLANSSEFSVLQD- 252
+K P +I AR+ G+ P++N N + QV++P+RTSSS +L + + S L+
Sbjct: 413 EKLAFPTNHIDLARKKGIAPNINAYNISSNGQVSIPKRTSSSADLYAKVHPSGLGSLEVC 472
Query: 251 ---------PKNKYQGSHSSSYNLNXXXXXXXXXXGHSNIHSP----------------- 150
+ G S+Y++N H N SP
Sbjct: 473 DVGHPNVNLANTDFIGQLPSAYSVN--QKLNSAIKNHLNAGSPLTGTGDRQSLNRAGNQG 530
Query: 149 --------DAHHDEFLEQSTNYASQAAATLRSLSQGRNCIGTSHGFVDLQYLERIY 6
D + ++L++++ Y ++AAA+ SL G N +GT HG DL L++ Y
Sbjct: 531 ADLLSPLMDPRYIQYLQRTSQYGARAAASPDSLLSG-NYVGTLHG--DLDGLQKAY 583
>gb|EOY18722.1| Pumilio 4 isoform 1 [Theobroma cacao]
Length = 1026
Score = 130 bits (328), Expect = 7e-28
Identities = 130/416 (31%), Positives = 194/416 (46%), Gaps = 66/416 (15%)
Frame = -2
Query: 1055 RKTALRNLSRKSSTE-------SLAALGGMPMKSGMGMRRKSFADIVQEGPGQSSASPHR 897
R T RN SRK S E L L G +G+G RRKSFADI+Q+G + +
Sbjct: 179 RNTNARNTSRKMSAEWLDRGSDGLVGLSG----TGLGARRKSFADILQDGLDRPATLSGH 234
Query: 896 LSRPPSYNSFSEMLDTADILNTSSSTDSLHK-TESFEAL-----HPIQXXXXXXXXXXXP 735
LS+P S N+FS+MLD A I S H ES E+L P
Sbjct: 235 LSQPSSRNAFSDMLDAASI--ADPSPPGFHNAAESIESLPAGVARPGVVGVQSHGKTTSH 292
Query: 734 NSFSGAGSSSTKTRTAEPHSSLRSP-PGFPAVRSQVPVDGEQNIARSN-PHVSPSGKTQI 561
+ S GSS +++ T EP+ RS G P V S+V ++NI SN + S T++
Sbjct: 293 SFASAVGSSLSRSTTPEPYLVGRSSGSGLPPVGSKVGHAEKKNIIGSNVQNGHSSAVTEL 352
Query: 560 SDILTSFQGLSLSKD-HANENALLQSA----------FEMGLSKANIQNLQQQ-LNKSRA 417
S+I + GL+LSK HA+EN+ ++S F + + Q+LQQQ ++KS A
Sbjct: 353 SEIGATLSGLTLSKTRHADENSHMRSQLQVDLDNQLDFSFNMPNGHNQSLQQQFIDKSSA 412
Query: 416 DKYVPP--YIGFARENGVVPDVNYLNF--DRQVNLPRRTSSSVNLRSLANSSEFSVLQD- 252
+K P +I AR+ G+ P++N N + QV++P+RTSSS +L + + S L+
Sbjct: 413 EKLAFPTNHIDLARKKGIAPNINAYNISSNGQVSIPKRTSSSADLYAKVHPSGLGSLEVC 472
Query: 251 ---------PKNKYQGSHSSSYNLNXXXXXXXXXXGHSNIHSP----------------- 150
+ G S+Y++N H N SP
Sbjct: 473 DVGHPNVNLANTDFIGQLPSAYSVN--QKLNSAIKNHLNAGSPLTGTGDRQSLNRAGNQG 530
Query: 149 --------DAHHDEFLEQSTNYASQAAATLRSLSQGRNCIGTSHGFVDLQYLERIY 6
D + ++L++++ Y ++AAA+ SL G N +GT HG DL L++ Y
Sbjct: 531 ADLLSPLMDPRYIQYLQRTSQYGARAAASPDSLLSG-NYVGTLHG--DLDGLQKAY 583
>ref|XP_002273503.1| PREDICTED: pumilio homolog 4 [Vitis vinifera]
gi|296085990|emb|CBI31431.3| unnamed protein product
[Vitis vinifera]
Length = 1026
Score = 125 bits (315), Expect = 2e-26
Identities = 127/414 (30%), Positives = 197/414 (47%), Gaps = 64/414 (15%)
Frame = -2
Query: 1055 RKTALRNLSRKSSTE-------SLAALGGMPMKSGMGMRRKSFADIVQEGPGQSSASPHR 897
RK A R++ R++S++ L L G +G+G R KSFADI+QEG + ++
Sbjct: 183 RKAAGRHIPRQTSSDWLERGSDGLTGLSG----AGLGPRTKSFADILQEGLDRPASLSSP 238
Query: 896 LSRPPSYNSFSEMLD--------TADILNTSSSTDSLHKTESFEALHPIQXXXXXXXXXX 741
RP S+N+F +++D A++ N S SLH S +Q
Sbjct: 239 FPRPASHNAFGDVVDGTAISDCYPAELCNGVESIKSLHSRSSAPGNVRLQ-----SPGAT 293
Query: 740 XPNSF-SGAGSSSTKTRTAEPHSSLRSP-PGFPAVRSQV-PVDGEQNIARSN-PHVSPSG 573
+SF S GSS +++ T EP + R P G P V ++V PV E+NI N + S
Sbjct: 294 VSHSFPSAVGSSLSRSTTPEPQLAARLPVSGLPPVSNRVYPV--EKNIVDMNVQNGRSSS 351
Query: 572 KTQISDILTSFQGLSLSKDH-ANENALLQSA----------FEMGLSKANIQNLQQQL-N 429
T++S+I + GLS+S++ +EN+ LQS F + + N Q++QQQL +
Sbjct: 352 MTELSNITATLSGLSMSRNRCVDENSHLQSQLHAEFDDQSDFLLNMPNGNSQSVQQQLTD 411
Query: 428 KSRADKYVPP--YIGFARENGVVPDVNYLNFDRQVNLPRRTSSSVNLRSLANSSEFSVLQ 255
KS+A K Y+ AR+N +V D+ D Q+N P+RT SS +L S NSS S L+
Sbjct: 412 KSKAAKPYTSTNYLDLARKNRIVTDL-----DGQINFPKRTFSSASLYSKVNSSGLSSLE 466
Query: 254 DPKNK--------YQGSHSSSYNLN----------------------XXXXXXXXXXGHS 165
P + + G S Y++N S
Sbjct: 467 GPSYQNANIPSIDFTGHVPSGYHVNQKLNTMINNHNDSGPALSGSGDGQSLSRSGNWVSS 526
Query: 164 NIHS-PDAHHDEFLEQSTNYASQAAATLRSLSQGRNCIGTSHGFVDLQYLERIY 6
++HS + H +++ +++YA++ AA+ S RN IGTSHG DL L++ Y
Sbjct: 527 DLHSYMEPHGVHYMQGTSDYATRTAASQGDPSSVRNFIGTSHG--DLLGLQKAY 578
>ref|XP_006436466.1| hypothetical protein CICLE_v10030594mg [Citrus clementina]
gi|567887890|ref|XP_006436467.1| hypothetical protein
CICLE_v10030594mg [Citrus clementina]
gi|568864458|ref|XP_006485615.1| PREDICTED: pumilio
homolog 4-like isoform X1 [Citrus sinensis]
gi|568864460|ref|XP_006485616.1| PREDICTED: pumilio
homolog 4-like isoform X2 [Citrus sinensis]
gi|568864462|ref|XP_006485617.1| PREDICTED: pumilio
homolog 4-like isoform X3 [Citrus sinensis]
gi|557538662|gb|ESR49706.1| hypothetical protein
CICLE_v10030594mg [Citrus clementina]
gi|557538663|gb|ESR49707.1| hypothetical protein
CICLE_v10030594mg [Citrus clementina]
Length = 1029
Score = 115 bits (288), Expect = 3e-23
Identities = 119/397 (29%), Positives = 185/397 (46%), Gaps = 55/397 (13%)
Frame = -2
Query: 1055 RKTALRNLSRKSSTESLAA----LGGMPMKSGMGMRRKSFADIVQEGPGQSSASPHRLSR 888
R A RNLSR +S E L L G+P +G+G RRKSFADI+QEG + ++ LSR
Sbjct: 189 RNAARRNLSRDASAEWLERGSDRLIGVPA-AGLGSRRKSFADILQEGLDRPASLSGHLSR 247
Query: 887 PPSYNSFSEMLDTADILNTSSSTDSLHKTESFEALH-----PIQXXXXXXXXXXXPNSFS 723
P S N++ E++ T + + S + ES E LH P + S
Sbjct: 248 PASCNAYGEIVGTG--IADAHRAGSCNGAESLEVLHSAAASPGLVRTKSHNRIPSHSFAS 305
Query: 722 GAGSSSTKTRTAEPHSSLRSP-PGFPAVRSQVPVDGEQNIARSNPHVSPSGKTQISDILT 546
GSS +++ T E RS G P V S+V + SN +++DI
Sbjct: 306 AVGSSLSRSTTPEAQLVGRSSGSGLPPVGSRVGAVEKNGAVGSN----VQNDIELADIAA 361
Query: 545 SFQGLSLSK-DHANENALLQSAFEMG----------LSKANIQNLQQQ-LNKSRADK--Y 408
+ GLSLS HA+E + +QS ++ S + Q+++QQ ++KS AD +
Sbjct: 362 TLSGLSLSNIRHADEVSHVQSQLQLNPDNQSDFLYDTSNGHNQSMKQQFMDKSTADNLAF 421
Query: 407 VPPYIGFARENGVVPDVN--YLNFDRQVNLPRRTSSSVNLRSLANSSEFSVLQDPKNKYQ 234
YI F R+NG+VP++N +N + QVN+ +RTSS NL S NS+ F + Q
Sbjct: 422 STHYIDFTRKNGIVPNLNASAINSNGQVNILKRTSSP-NLYSKMNSTGFGGSSRSVGRQQ 480
Query: 233 GSHSSS---------YNLNXXXXXXXXXXGHS------------------NIHSP--DAH 141
++ SS Y++N + + HSP D
Sbjct: 481 NANISSLDFTNVSGDYSVNQKLNSLVNHHFDTVGIGATRNLNGMVNQVALDFHSPPMDPR 540
Query: 140 HDEFLEQSTNYASQAAATLRSLSQGRNCIGTSHGFVD 30
+ ++L+++++YA+++AA+ RN G+S G D
Sbjct: 541 YAQYLQRTSDYATRSAASASDPFAARNHFGSSLGDSD 577
>gb|EXC32919.1| Pumilio-4-like protein [Morus notabilis]
Length = 989
Score = 114 bits (286), Expect = 5e-23
Identities = 108/364 (29%), Positives = 165/364 (45%), Gaps = 40/364 (10%)
Frame = -2
Query: 977 SGMGMRRKSFADIVQEGPGQSSASPHRLSRPPSYNSFSEMLDTADILNTSSSTDSLHKTE 798
+G+G RRKSFADI+QEG + ++ LSRP S + F + ++ + L L +
Sbjct: 193 NGLGARRKSFADILQEGLDRPASMSSFLSRPSSCSDFGDGVELLEGLPNGRGPSGLAGVQ 252
Query: 797 SFEALHPIQXXXXXXXXXXXPNSFSGA-GSSSTKTRTAEPHSSLRSP-PGFPAVRSQV-P 627
S P +FS A GSS +++ T E RSP G P V S+V P
Sbjct: 253 SHGTASPY--------------AFSSATGSSLSRSTTPELKLVGRSPNSGLPPVGSRVFP 298
Query: 626 VDGEQNIARSNPHVSPSGKTQISDILTSFQGLSLSK-DHANENALLQSAFEMG------- 471
++ S + SG ++++I + GLSLS+ + + N+ +QS +
Sbjct: 299 IEQNNGRGLSVQNGHSSGMNELTEIAANLSGLSLSEVRNRDVNSHVQSQLHLNFDNKSDF 358
Query: 470 -LSKANIQNLQQQLNKSRADKYVPP--YIGFARENGVVPDVN--YLNFDRQVNLPRRTSS 306
+ QNLQQ+L + A+ P Y+ AR+NG+V ++N N QVNLP RTSS
Sbjct: 359 LFKNGHQQNLQQELMNANAENLSRPGIYVDLARKNGIVTNLNASKTNCTMQVNLPTRTSS 418
Query: 305 SVNLRSLANSSEFSVLQDPKNKYQGSHSSSYNLNXXXXXXXXXXGH-------------- 168
S N L SS F L+ P Q + + +
Sbjct: 419 SAN---LYGSSGFGSLEGPNAYNQNATTFGFEFMPGAFPTNQKRNSAIDNHFDAGLASTQ 475
Query: 167 --------SNIHSP--DAHHDEFLEQSTNYASQAAATLRSLSQGRNCIGTSHGFVDLQYL 18
S++HSP D + +FL++S YA++ A TL S +N TSHG DL+ +
Sbjct: 476 NGQNINSLSDLHSPIIDPRYLQFLQRSPEYAARTATTLNDPSLVKNQFATSHG--DLEGI 533
Query: 17 ERIY 6
++ Y
Sbjct: 534 QKAY 537
>ref|XP_002530940.1| pumilio, putative [Ricinus communis] gi|223529499|gb|EEF31455.1|
pumilio, putative [Ricinus communis]
Length = 1024
Score = 105 bits (262), Expect = 3e-20
Identities = 115/375 (30%), Positives = 171/375 (45%), Gaps = 51/375 (13%)
Frame = -2
Query: 977 SGMGMRRKSFADIVQEGPGQSSASPHRLSRPPSYNSFSEMLDTADILNTS--------SS 822
+G+G RRKSFADI+QEG + ++ LSRP S+N+F ++L T I ++ S
Sbjct: 211 AGLGARRKSFADILQEGLDRPASLSGHLSRPASHNAFGDLLGTTGISDSCPVGFAGGLES 270
Query: 821 TDSLHKTESFEALHPIQXXXXXXXXXXXPNSFSGA-GSSSTKTRTAEPHSSLRSP-PGFP 648
D L + L ++ +SF+ A GSS +++ T E R P G P
Sbjct: 271 LDGLRSGSASPGLVGVK-----SHGTTVSHSFASAIGSSLSRSTTPEQQLVGRCPSSGLP 325
Query: 647 AVRSQVPVDGEQNIARS---NPHVSPSGKTQISDILTSFQGLSLSK-DHANENALL---- 492
V S+V ++N S N H+ SG T++ +I + GL+LSK H +++L+
Sbjct: 326 PVGSKVAFLEKKNAVGSTAQNGHL--SGITELGEITATLSGLNLSKLRHPEQDSLIELDN 383
Query: 491 QSAFEMGLSKANIQNLQQQL-NKSRAD--KYVPPYIGFARENGVVPDVNYLNFDR--QVN 327
Q+ F S +LQQQL +KS A+ + YI A +NG +P++N F+ +V+
Sbjct: 384 QADFLFNTSD-GYNHLQQQLRDKSNAENFSFSASYIDVAMKNGAMPNLNASEFNTNGEVS 442
Query: 326 LPRRTSSSVNLRSLANSSEFSVLQDPKNKYQGSHSSSYN--------------------- 210
+P+RTSS NL S NSS LQ Q ++ S N
Sbjct: 443 IPKRTSSFTNLHSKLNSSGLGGLQRSNGHLQNANIPSMNFVSHSPGAYTSNQKLDSLLKN 502
Query: 209 -LNXXXXXXXXXXGHSNIHSPDAHHDEFLEQ--STNYASQAAAT----LRSLSQGRNCIG 51
L+ GHS + D EF Q + YA T R+ Q RN G
Sbjct: 503 HLDAGSALGGNGVGHSLNRAGDQAGPEFHSQVMDSRYAQYLRRTSDYETRTNGQLRNFFG 562
Query: 50 TSHGFVDLQYLERIY 6
SHG DL +++ Y
Sbjct: 563 ISHG--DLDEVQKAY 575
>ref|XP_006589409.1| PREDICTED: pumilio homolog 4-like isoform X2 [Glycine max]
Length = 983
Score = 95.9 bits (237), Expect = 2e-17
Identities = 99/373 (26%), Positives = 169/373 (45%), Gaps = 29/373 (7%)
Frame = -2
Query: 1037 NLSRKSSTESLAA-LGGMPMKSGMGM--RRKSFADIVQEGPGQSSASPHRLSRPPSYNSF 867
N+SR+ S++ L +GG+ SG G+ RR S+ DI+QEG Q + +SRP S+N+F
Sbjct: 188 NVSRQGSSQMLDRHMGGLTRMSGAGLGGRRTSYTDILQEGLEQPTMLSSTMSRPASHNAF 247
Query: 866 SEMLDTADILNTSSSTDSLHKTESFEALHPIQXXXXXXXXXXXPNSFS-GAGSSSTKTRT 690
+++ + I++ S + L + S L +Q +SF+ G+S ++ +T
Sbjct: 248 GDIMGSTGIVD-RESFEGLRSSASTPGLVGLQ-----NHGVNLSHSFAPSVGTSLSRVKT 301
Query: 689 AEPHSSLRSPPGFPAVRSQVPVDGEQN--IARSNPHVSPSGKTQISDILTSFQGLSLS-K 519
EP + P G A + V +N + + H S T ++D+++S GL+LS
Sbjct: 302 PEP-QVIGRPVGSAASQMGGKVFSVENSGMGVGSQHGHSSNMTDLTDVVSSLAGLNLSGV 360
Query: 518 DHANENALLQSAFEMGLSKANIQNLQQQLNKSRADKYVPPYIGFARENGVVPDVNYLNFD 339
HA +++LL+S +M + L Q N + R N +V ++N + +
Sbjct: 361 RHAEQDSLLKSKLQMDVDNHADVLLNTQSN-----------VNLPRHNDIVTNLNTFSSN 409
Query: 338 RQVNLPRRTSSSVNLRSLANSSEFSVLQDPKNKYQGSHSSSYNLNXXXXXXXXXXGHS-- 165
VNL ++T+SS NLRS +S+ + P + G S+Y +N +
Sbjct: 410 DHVNLLKKTASSANLRSKVHSTG-NAASLPSADFTGHVPSAYLVNSKLNSVSINNLETAM 468
Query: 164 ------------------NIHSP--DAHHDEFLEQSTNYASQAAATLRSLSQGRNCIGTS 45
+HS D + L+QS +Y+ Q ++ Q RN S
Sbjct: 469 RLRRDGQSLDAQGNHVGPELHSTTLDPRFIQCLQQSADYSMQGMSSSGHPLQMRNFPDAS 528
Query: 44 HGFVDLQYLERIY 6
HG DL+ L + Y
Sbjct: 529 HG--DLEGLRKAY 539
>ref|XP_004496247.1| PREDICTED: pumilio homolog 4-like isoform X5 [Cicer arietinum]
Length = 981
Score = 93.2 bits (230), Expect = 2e-16
Identities = 105/379 (27%), Positives = 176/379 (46%), Gaps = 29/379 (7%)
Frame = -2
Query: 1055 RKTALRNLSRKSSTESLAA-LGGMPMKSGMGM--RRKSFADIVQEGPGQSSASPHRLSRP 885
RK + RNLSR+SST+ L + G+ SG G+ RR F+DI+Q+G Q + S + +SRP
Sbjct: 180 RKASGRNLSRQSSTQLLDRHMDGLARMSGTGLGGRRTCFSDILQDGLDQPALSSN-MSRP 238
Query: 884 PSYNSFSEMLDTADILNTSSSTDSLHKTESFEALHPIQXXXXXXXXXXXPNSFSGA-GSS 708
S+N+F ++ D+ I+ S + L + S L +Q +SFS A GSS
Sbjct: 239 ASHNAFGDIRDSTGIVGRES-LEGLRSSASTPGLIGLQNHGVNVS-----HSFSSAVGSS 292
Query: 707 STKTRTAEPHSSLRSPPG--FPAVRSQVPVDGEQNIARSNPHVSPSGKTQISDILTSFQG 534
+++ T E H R P G P + S V + I N + S T +S++++S G
Sbjct: 293 LSRSTTPESHVIGR-PVGSAVPLMGSNVFSAEKSGIGMGNHNGHTSNMTDLSEMVSSLSG 351
Query: 533 LSLS-KDHANENALLQSAFEMGL-SKANIQNLQQQLNKSRADKYVPPYIGFARENGVVPD 360
L+LS A +++LL+S ++ + S AN+ P + + N + D
Sbjct: 352 LNLSGARRAEQDSLLKSKMQLEVDSHANVL------------LSTPNNVNLPKHNELATD 399
Query: 359 VNYLNFDRQVNLPRRTSSSVNLRSLANSS-EFSVLQ--DPKNKYQGSHSSSYNLNXXXXX 189
+N + + +VNL ++T+S +LRS +SS + L D ++ G++ ++ LN
Sbjct: 400 LNTFSLNERVNLLKKTASFASLRSNVHSSGNITSLPSIDFTSQVPGAYPANTKLNNMYNN 459
Query: 188 XXXXXGHS------------------NIHSPDAHHDEFLEQSTNYASQAAATLRSLSQGR 63
N + D + L+QS+ Y+ ++ Q R
Sbjct: 460 HIETALRGRRDGQNLDALGNQVGSEFNSTTMDPRIIQCLQQSSGYSMHGMSSSGDPFQMR 519
Query: 62 NCIGTSHGFVDLQYLERIY 6
N SHG DL+ L++ Y
Sbjct: 520 NFSDASHG--DLEGLQKAY 536
>ref|XP_004496245.1| PREDICTED: pumilio homolog 4-like isoform X3 [Cicer arietinum]
Length = 993
Score = 93.2 bits (230), Expect = 2e-16
Identities = 105/379 (27%), Positives = 176/379 (46%), Gaps = 29/379 (7%)
Frame = -2
Query: 1055 RKTALRNLSRKSSTESLAA-LGGMPMKSGMGM--RRKSFADIVQEGPGQSSASPHRLSRP 885
RK + RNLSR+SST+ L + G+ SG G+ RR F+DI+Q+G Q + S + +SRP
Sbjct: 180 RKASGRNLSRQSSTQLLDRHMDGLARMSGTGLGGRRTCFSDILQDGLDQPALSSN-MSRP 238
Query: 884 PSYNSFSEMLDTADILNTSSSTDSLHKTESFEALHPIQXXXXXXXXXXXPNSFSGA-GSS 708
S+N+F ++ D+ I+ S + L + S L +Q +SFS A GSS
Sbjct: 239 ASHNAFGDIRDSTGIVGRES-LEGLRSSASTPGLIGLQNHGVNVS-----HSFSSAVGSS 292
Query: 707 STKTRTAEPHSSLRSPPG--FPAVRSQVPVDGEQNIARSNPHVSPSGKTQISDILTSFQG 534
+++ T E H R P G P + S V + I N + S T +S++++S G
Sbjct: 293 LSRSTTPESHVIGR-PVGSAVPLMGSNVFSAEKSGIGMGNHNGHTSNMTDLSEMVSSLSG 351
Query: 533 LSLS-KDHANENALLQSAFEMGL-SKANIQNLQQQLNKSRADKYVPPYIGFARENGVVPD 360
L+LS A +++LL+S ++ + S AN+ P + + N + D
Sbjct: 352 LNLSGARRAEQDSLLKSKMQLEVDSHANVL------------LSTPNNVNLPKHNELATD 399
Query: 359 VNYLNFDRQVNLPRRTSSSVNLRSLANSS-EFSVLQ--DPKNKYQGSHSSSYNLNXXXXX 189
+N + + +VNL ++T+S +LRS +SS + L D ++ G++ ++ LN
Sbjct: 400 LNTFSLNERVNLLKKTASFASLRSNVHSSGNITSLPSIDFTSQVPGAYPANTKLNNMYNN 459
Query: 188 XXXXXGHS------------------NIHSPDAHHDEFLEQSTNYASQAAATLRSLSQGR 63
N + D + L+QS+ Y+ ++ Q R
Sbjct: 460 HIETALRGRRDGQNLDALGNQVGSEFNSTTMDPRIIQCLQQSSGYSMHGMSSSGDPFQMR 519
Query: 62 NCIGTSHGFVDLQYLERIY 6
N SHG DL+ L++ Y
Sbjct: 520 NFSDASHG--DLEGLQKAY 536
>gb|EMJ21481.1| hypothetical protein PRUPE_ppa000731mg [Prunus persica]
Length = 1021
Score = 92.8 bits (229), Expect = 2e-16
Identities = 116/400 (29%), Positives = 176/400 (44%), Gaps = 56/400 (14%)
Frame = -2
Query: 1037 NLSRKSSTESLA----ALGGMPMKSGMGMRRKSFADIVQEGPGQSSASPHRLSRPPSYNS 870
NL +++S+E L L G+ SG+G RRKSFADI+QEG P L+RP S +
Sbjct: 187 NLPKQTSSEWLDRGSDGLIGLST-SGLGARRKSFADILQEG----LDPPASLTRPSSRIA 241
Query: 869 FSEMLDTADILNTSSSTDSLHKTESFEALH----PIQXXXXXXXXXXXPNSFSGA-GSSS 705
FS+++D+ + + + + + ES E LH +SF+ A G S
Sbjct: 242 FSDIMDSTGMAD-ARAVGLCNGVESAEGLHNGAASCGLVGVQSHGTAASHSFASAVGPSL 300
Query: 704 TKTRTAEPHSSLRSPPGFPAVRSQV-PVDGEQNIARSNPHVSPSGKTQISDILTSFQGLS 528
+++RT E G P V S+V PV+ + P + SG + DI + GLS
Sbjct: 301 SRSRTPEQLFGRSPSAGLPPVGSRVFPVEKKNVAGPDMPKDNSSGMNDL-DISANLSGLS 359
Query: 527 LSKDHA-NENALLQSAFEMGLSK----------ANIQNLQQQL-NKSRADKY--VPPYIG 390
LSK + +E++ +QS + L K + Q LQQQL KS A+ + Y
Sbjct: 360 LSKGRSVDEDSRIQSQLHLDLDKQRDFLFNMPNGHNQRLQQQLIEKSNAESFSLASNYPH 419
Query: 389 FARENGVVPDVNYLNFDRQVNLPRRTSSSVNLRSLANSSEFSVLQDPKNKYQGS------ 228
A++NG++ + N D Q N RRTS+S S +SS F L+ YQ +
Sbjct: 420 LAKQNGIMTNRN--TSDGQANFGRRTSAS--FYSKGSSSGFGTLEGSNVHYQDANTPGME 475
Query: 227 ---HSSSYNLNXXXXXXXXXXGH---------------------SNIHSP--DAHHDEFL 126
HS +Y +N S +HS D + +FL
Sbjct: 476 FHGHSGAYPVNPKLNMTINNHLDAAALPGSGDGHSMNRLGNKVGSGLHSSVMDPSYIQFL 535
Query: 125 EQSTNYASQAAATLRSLSQGRNCIGTSHGFVDLQYLERIY 6
Q +YA++ + +N GT HG DL+ L++ Y
Sbjct: 536 -QRADYATRNVNSPSGYPPSKNHFGTLHG--DLEGLQKAY 572
>ref|XP_006589408.1| PREDICTED: pumilio homolog 4-like isoform X1 [Glycine max]
Length = 984
Score = 91.3 bits (225), Expect = 6e-16
Identities = 100/374 (26%), Positives = 169/374 (45%), Gaps = 30/374 (8%)
Frame = -2
Query: 1037 NLSRKSSTESLAA-LGGMPMKSGMGM--RRKSFADIVQ-EGPGQSSASPHRLSRPPSYNS 870
N+SR+ S++ L +GG+ SG G+ RR S+ DI+Q EG Q + +SRP S+N+
Sbjct: 188 NVSRQGSSQMLDRHMGGLTRMSGAGLGGRRTSYTDILQQEGLEQPTMLSSTMSRPASHNA 247
Query: 869 FSEMLDTADILNTSSSTDSLHKTESFEALHPIQXXXXXXXXXXXPNSFS-GAGSSSTKTR 693
F +++ + I++ S + L + S L +Q +SF+ G+S ++ +
Sbjct: 248 FGDIMGSTGIVDRESF-EGLRSSASTPGLVGLQNHGVNLS-----HSFAPSVGTSLSRVK 301
Query: 692 TAEPHSSLRSPPGFPAVRSQVPVDGEQN--IARSNPHVSPSGKTQISDILTSFQGLSLSK 519
T EP R P G A + V +N + + H S T ++D+++S GL+LS
Sbjct: 302 TPEPQVIGR-PVGSAASQMGGKVFSVENSGMGVGSQHGHSSNMTDLTDVVSSLAGLNLSG 360
Query: 518 -DHANENALLQSAFEMGLSKANIQNLQQQLNKSRADKYVPPYIGFARENGVVPDVNYLNF 342
HA +++LL+S +M + L Q N + R N +V ++N +
Sbjct: 361 VRHAEQDSLLKSKLQMDVDNHADVLLNTQSN-----------VNLPRHNDIVTNLNTFSS 409
Query: 341 DRQVNLPRRTSSSVNLRSLANSSEFSVLQDPKNKYQGSHSSSYNLNXXXXXXXXXXGHS- 165
+ VNL ++T+SS NLRS +S+ + P + G S+Y +N +
Sbjct: 410 NDHVNLLKKTASSANLRSKVHSTG-NAASLPSADFTGHVPSAYLVNSKLNSVSINNLETA 468
Query: 164 -------------------NIHSP--DAHHDEFLEQSTNYASQAAATLRSLSQGRNCIGT 48
+HS D + L+QS +Y+ Q ++ Q RN
Sbjct: 469 MRLRRDGQSLDAQGNHVGPELHSTTLDPRFIQCLQQSADYSMQGMSSSGHPLQMRNFPDA 528
Query: 47 SHGFVDLQYLERIY 6
SHG DL+ L + Y
Sbjct: 529 SHG--DLEGLRKAY 540
>ref|XP_004496246.1| PREDICTED: pumilio homolog 4-like isoform X4 [Cicer arietinum]
Length = 982
Score = 90.9 bits (224), Expect = 8e-16
Identities = 102/379 (26%), Positives = 172/379 (45%), Gaps = 29/379 (7%)
Frame = -2
Query: 1055 RKTALRNLSRKSSTESLAA-LGGMPMKSGMGM--RRKSFADIVQEGPGQSSASPHRLSRP 885
RK + RNLSR+SST+ L + G+ SG G+ RR F+DI+Q+ A +SRP
Sbjct: 180 RKASGRNLSRQSSTQLLDRHMDGLARMSGTGLGGRRTCFSDILQQDGLDQPALSSNMSRP 239
Query: 884 PSYNSFSEMLDTADILNTSSSTDSLHKTESFEALHPIQXXXXXXXXXXXPNSFSGA-GSS 708
S+N+F ++ D+ I+ S + L + S L +Q +SFS A GSS
Sbjct: 240 ASHNAFGDIRDSTGIVG-RESLEGLRSSASTPGLIGLQ-----NHGVNVSHSFSSAVGSS 293
Query: 707 STKTRTAEPHSSLRSPPG--FPAVRSQVPVDGEQNIARSNPHVSPSGKTQISDILTSFQG 534
+++ T E H + P G P + S V + I N + S T +S++++S G
Sbjct: 294 LSRSTTPESH-VIGRPVGSAVPLMGSNVFSAEKSGIGMGNHNGHTSNMTDLSEMVSSLSG 352
Query: 533 LSLS-KDHANENALLQSAFEMGL-SKANIQNLQQQLNKSRADKYVPPYIGFARENGVVPD 360
L+LS A +++LL+S ++ + S AN+ P + + N + D
Sbjct: 353 LNLSGARRAEQDSLLKSKMQLEVDSHANVL------------LSTPNNVNLPKHNELATD 400
Query: 359 VNYLNFDRQVNLPRRTSSSVNLRSLANSS-EFSVLQ--DPKNKYQGSHSSSYNLNXXXXX 189
+N + + +VNL ++T+S +LRS +SS + L D ++ G++ ++ LN
Sbjct: 401 LNTFSLNERVNLLKKTASFASLRSNVHSSGNITSLPSIDFTSQVPGAYPANTKLNNMYNN 460
Query: 188 XXXXXGHS------------------NIHSPDAHHDEFLEQSTNYASQAAATLRSLSQGR 63
N + D + L+QS+ Y+ ++ Q R
Sbjct: 461 HIETALRGRRDGQNLDALGNQVGSEFNSTTMDPRIIQCLQQSSGYSMHGMSSSGDPFQMR 520
Query: 62 NCIGTSHGFVDLQYLERIY 6
N SHG DL+ L++ Y
Sbjct: 521 NFSDASHG--DLEGLQKAY 537
>ref|XP_004496243.1| PREDICTED: pumilio homolog 4-like isoform X1 [Cicer arietinum]
gi|502118392|ref|XP_004496244.1| PREDICTED: pumilio
homolog 4-like isoform X2 [Cicer arietinum]
Length = 994
Score = 90.9 bits (224), Expect = 8e-16
Identities = 102/379 (26%), Positives = 172/379 (45%), Gaps = 29/379 (7%)
Frame = -2
Query: 1055 RKTALRNLSRKSSTESLAA-LGGMPMKSGMGM--RRKSFADIVQEGPGQSSASPHRLSRP 885
RK + RNLSR+SST+ L + G+ SG G+ RR F+DI+Q+ A +SRP
Sbjct: 180 RKASGRNLSRQSSTQLLDRHMDGLARMSGTGLGGRRTCFSDILQQDGLDQPALSSNMSRP 239
Query: 884 PSYNSFSEMLDTADILNTSSSTDSLHKTESFEALHPIQXXXXXXXXXXXPNSFSGA-GSS 708
S+N+F ++ D+ I+ S + L + S L +Q +SFS A GSS
Sbjct: 240 ASHNAFGDIRDSTGIVG-RESLEGLRSSASTPGLIGLQ-----NHGVNVSHSFSSAVGSS 293
Query: 707 STKTRTAEPHSSLRSPPG--FPAVRSQVPVDGEQNIARSNPHVSPSGKTQISDILTSFQG 534
+++ T E H + P G P + S V + I N + S T +S++++S G
Sbjct: 294 LSRSTTPESH-VIGRPVGSAVPLMGSNVFSAEKSGIGMGNHNGHTSNMTDLSEMVSSLSG 352
Query: 533 LSLS-KDHANENALLQSAFEMGL-SKANIQNLQQQLNKSRADKYVPPYIGFARENGVVPD 360
L+LS A +++LL+S ++ + S AN+ P + + N + D
Sbjct: 353 LNLSGARRAEQDSLLKSKMQLEVDSHANVL------------LSTPNNVNLPKHNELATD 400
Query: 359 VNYLNFDRQVNLPRRTSSSVNLRSLANSS-EFSVLQ--DPKNKYQGSHSSSYNLNXXXXX 189
+N + + +VNL ++T+S +LRS +SS + L D ++ G++ ++ LN
Sbjct: 401 LNTFSLNERVNLLKKTASFASLRSNVHSSGNITSLPSIDFTSQVPGAYPANTKLNNMYNN 460
Query: 188 XXXXXGHS------------------NIHSPDAHHDEFLEQSTNYASQAAATLRSLSQGR 63
N + D + L+QS+ Y+ ++ Q R
Sbjct: 461 HIETALRGRRDGQNLDALGNQVGSEFNSTTMDPRIIQCLQQSSGYSMHGMSSSGDPFQMR 520
Query: 62 NCIGTSHGFVDLQYLERIY 6
N SHG DL+ L++ Y
Sbjct: 521 NFSDASHG--DLEGLQKAY 537
>ref|XP_006606263.1| PREDICTED: pumilio homolog 4-like isoform X3 [Glycine max]
Length = 982
Score = 90.5 bits (223), Expect = 1e-15
Identities = 99/378 (26%), Positives = 169/378 (44%), Gaps = 28/378 (7%)
Frame = -2
Query: 1055 RKTALRNLSRKSSTESLAA-LGGMPMKSGMGM--RRKSFADIVQEGPGQSSASPHRLSRP 885
RK++ N+SR+ S++ L + G+ SG G+ RR F DI+QEG Q + +SRP
Sbjct: 181 RKSSGWNVSRQGSSQMLDRHMDGLTRMSGAGLGGRRTGFNDILQEGLEQPAPLSSTMSRP 240
Query: 884 PSYNSFSEMLDTADILNTSSSTDSLHKTESFEALHPIQXXXXXXXXXXXPNSFSGA-GSS 708
S+N+F +++ + I++ S + L + S L +Q +SF+ A G+S
Sbjct: 241 ASHNAFGDIMGSTGIVD-RESFEGLRSSASTPGLVGLQ-----NHSLNLSHSFAPAVGTS 294
Query: 707 STKTRTAEPHSSLRSPPGFPAVRSQVPVDGEQNIAR--SNPHVSPSGKTQISDILTSFQG 534
++ +T E + P A + V +NI H S T ++D+++S G
Sbjct: 295 PSRVKTPEA-QVIGRPVASAASQMGNKVFSVENIGMGLGTQHGHSSNMTDLTDVVSSLAG 353
Query: 533 LSLS-KDHANENALLQSAFEMGLSKANIQNLQQQLNKSRADKYVPPYIGFARENGVVPDV 357
L+LS HA +++LL+S +M + L Q N + R N + ++
Sbjct: 354 LNLSGARHAEQDSLLKSKLQMEVDNHADVLLSTQSN-----------VNLPRRNDIATNL 402
Query: 356 NYLNFDRQVNLPRRTSSSVNLRSLANS-----------------SEFSVLQDPKNKYQGS 228
N + + VNL ++T+SS NLRS +S S + V + Y +
Sbjct: 403 NTFSSNEHVNLLKKTASSANLRSKLHSTGNASSFPNADFTGHVPSAYLVNSKLNSVYNNN 462
Query: 227 HSSSYNLNXXXXXXXXXXGH--SNIHSP--DAHHDEFLEQSTNYASQAAATLRSLSQGRN 60
++ L H +HS + H + L+QS++Y+ Q ++ Q RN
Sbjct: 463 LETALRLRRDGQSLDAQGNHVGPELHSSTLNPHLIQCLQQSSDYSMQGMSSSGYPLQMRN 522
Query: 59 CIGTSHGFVDLQYLERIY 6
SHG DL+ L + Y
Sbjct: 523 FPDASHG--DLEGLRKAY 538
>ref|XP_003591862.1| 60S ribosomal protein L4 [Medicago truncatula]
gi|355480910|gb|AES62113.1| 60S ribosomal protein L4
[Medicago truncatula]
Length = 1176
Score = 89.7 bits (221), Expect = 2e-15
Identities = 99/373 (26%), Positives = 170/373 (45%), Gaps = 23/373 (6%)
Frame = -2
Query: 1055 RKTALRNLSRKSSTESLAA-LGGMPMKSG--MGMRRKSFADIVQEGPGQSSASPHRLSRP 885
RK + RNL R+SST+ L + GM G +G+RR ++DI+Q+G Q + S + +SRP
Sbjct: 177 RKASGRNLPRQSSTQLLDRHMDGMTRMPGTSLGVRRTCYSDILQDGFDQPTLSSN-MSRP 235
Query: 884 PSYNSFSEMLDTADILNTSSSTDSLHKTESFEALHPIQXXXXXXXXXXXPNSFSGAGSSS 705
S+N+F ++ D+ I++ + L + S L +Q N S GSS
Sbjct: 236 ASHNAFVDIRDSTGIVDREP-LEGLRSSASTPGLVGLQNHGVNSH-----NFSSVVGSSL 289
Query: 704 TKTRTAEPHSSLRSPPGFPAVRSQVPVDGEQNIARSNPHVSPSGKTQISDILTSFQGLSL 525
+++ T E H R P G + V +NI N + S T ++D+++S GL+L
Sbjct: 290 SRSTTPESHVIGR-PVGSGVPQMGSKVFSAENIGLGNHNGHSSNMTDLADMVSSLSGLNL 348
Query: 524 S-KDHANENALLQSAFEMGLSKANIQNLQQQLNKSRADKYVPPYIGFARENGVVPDVNYL 348
S A ++ LL+S ++ + N + P + + N + D+N
Sbjct: 349 SGARRAEQDNLLKSKLQVEVD-----------NHANVMLSTPNNVNLPKHNELATDLNTF 397
Query: 347 NFDRQVNLPRRTSSSVNLRSLANSSEFSVLQDPKNKYQGSHSSS------YNLNXXXXXX 186
+ + +VNL ++T+S NLRS A+S+ D + ++ ++ YN +
Sbjct: 398 SLNERVNLLKKTASYANLRSNAHSTGNLTSIDFAGQVPSAYPANTTLNNVYNNHLETALR 457
Query: 185 XXXXGHS------------NIHSPDAHHDEFLEQSTNYASQAAATLRSLSQGRNCIGTS- 45
GH+ N + D + L+QS+ Y+ ++ R Q RN S
Sbjct: 458 GRRDGHNIDALGNQVRSDFNSATLDPRIIQCLQQSSEYSMHGMSSSRDPFQMRNFSDASQ 517
Query: 44 HGFVDLQYLERIY 6
HG DL+ L++ Y
Sbjct: 518 HG--DLEGLQKAY 528
>ref|XP_002311080.2| hypothetical protein POPTR_0008s03630g [Populus trichocarpa]
gi|566182194|ref|XP_006379542.1| pumilio/Puf RNA-binding
domain-containing family protein [Populus trichocarpa]
gi|566182196|ref|XP_002311079.2| hypothetical protein
POPTR_0008s03630g [Populus trichocarpa]
gi|550332361|gb|EEE88447.2| hypothetical protein
POPTR_0008s03630g [Populus trichocarpa]
gi|550332362|gb|ERP57339.1| pumilio/Puf RNA-binding
domain-containing family protein [Populus trichocarpa]
gi|550332363|gb|EEE88446.2| hypothetical protein
POPTR_0008s03630g [Populus trichocarpa]
Length = 1031
Score = 89.4 bits (220), Expect = 2e-15
Identities = 105/403 (26%), Positives = 171/403 (42%), Gaps = 53/403 (13%)
Frame = -2
Query: 1055 RKTALRNLSRKSSTESLAALGGMPMKSGMGMRRKSFADIVQEGPGQSSASPHRLSRPPSY 876
R +RN S K + G +S +G RRKSFADI+QEG Q ++ P LS P S+
Sbjct: 189 RNNVIRNASSKWLDRGSSDPG--LQRSRLGARRKSFADILQEGLDQPTSIPGHLSSPASH 246
Query: 875 NSFSEMLDTADILNTSSSTDSLHK-TESFEALHPIQXXXXXXXXXXXPNSFSGAGSS--- 708
+FS++LDT LH ES E L+ N+FS + +S
Sbjct: 247 TTFSDLLDTTG--ECDPHQVGLHDGMESLEGLYSGAATTAFTGTQSHSNTFSHSFASAVG 304
Query: 707 STKTRTAEPHSSLRSPPGFPA---VRSQV-PVDGEQNIARSNPHVSPSGKTQISDILTSF 540
S+ +R+ P L P + V S+V P++ + + + SG T++ +I +
Sbjct: 305 SSLSRSTTPEQQLLGRPAISSLHPVGSRVGPIEKKNAVGMIVQNNHSSGITELGEIANTL 364
Query: 539 QGLSL-------SKDHANENALL----QSAFEMGLSKANIQNLQQQL---NKSRADKYVP 402
GL+L + H + + F +S Q L QQL +K +
Sbjct: 365 SGLNLLNTRLTDQESHTRGQLQMDLDSEPHFPFNMSNGAEQALHQQLIETSKVENLSFST 424
Query: 401 PYIGFARENGVVPDVN--YLNFDRQVNLPRRTSSSVNLRSLANSSEFSVLQDPKNKYQGS 228
+ R N ++P+ N ++++ +V++PRRTSSS+NL S NS L+ +Q +
Sbjct: 425 NHTDMPRNNRIIPNNNASKISYNGEVSIPRRTSSSINLHSQMNSLGLGSLERSNVYHQNA 484
Query: 227 H-------------SSSYNLN--------------XXXXXXXXXXGHSNIHSP--DAHHD 135
+ S+ LN S++ SP D +
Sbjct: 485 NIPIMDFTGHVPDDYSTLKLNSMIKNHFDTGGVGIENGFNRLGNQVGSDLRSPFLDPRYT 544
Query: 134 EFLEQSTNYASQAAATLRSLSQGRNCIGTSHGFVDLQYLERIY 6
+ L++ +YA+ A A+ S R+ GTS G DL +++ Y
Sbjct: 545 QSLQRMLDYATHAVAS-SSEPPVRDYFGTSEG--DLDRIQKAY 584
>ref|XP_004307367.1| PREDICTED: pumilio homolog 4-like [Fragaria vesca subsp. vesca]
Length = 1022
Score = 88.6 bits (218), Expect = 4e-15
Identities = 109/380 (28%), Positives = 159/380 (41%), Gaps = 57/380 (15%)
Frame = -2
Query: 977 SGMGMRRKSFADIVQEGPGQSSASPHRLSRPPSYNSFSEMLDT--------ADILNTSSS 822
+G+G RRKSFADI+QEG Q ++ P L RP S N+F +++++ + N S
Sbjct: 210 NGLGARRKSFADILQEGIDQPTSCP--LLRPSSCNAFGDVMNSKGMADPQPVGLCNGVDS 267
Query: 821 TDSLHKTESFEALHPIQXXXXXXXXXXXPNSFSGAGSSSTKTRTAEPHSSLRSPPGFPAV 642
+ LH L +Q SF AG S +R+ P L G P +
Sbjct: 268 IEGLHTGADLRGLIGMQ-----NHGTPVSQSFVSAGGHSL-SRSRTPDPQLFGSSGLPPM 321
Query: 641 RSQVPVDGEQNIARSNPHVSPSGKTQISDILTSFQGLSLSK-DHANENALLQSAFEMGLS 465
P G +I N SP+ T++ ++ +F GLSLSK A+E+ LQS L
Sbjct: 322 GRVYPNVGGADIQSDN---SPA-MTELPNMTKNFSGLSLSKATSADEDNRLQSQLRRDLD 377
Query: 464 ----------KANIQNLQQQL-NKSRADKY--VPPYIGFARENGVVPDVNYLNFDRQVNL 324
+ Q LQQQL KS A+ + Y A +NG++ + N N VN
Sbjct: 378 NQRDFLFNTPNSQNQRLQQQLIEKSNAENFSLSTNYAHLANKNGILTNRNAPN--GHVNF 435
Query: 323 PRRTSSSVNLRSLANSSEFSVLQDPKNKYQ---------------GSHSSSYNLNXXXXX 189
PRRTSS +L S +SS + +YQ G++ ++ LN
Sbjct: 436 PRRTSSP-SLYSNGSSSGLGTFEGLNAQYQDVNTPAGIDLNGHASGAYPANQKLNNHLDA 494
Query: 188 XXXXXGHSN----------------IHSP--DAHHDEFLEQSTNYASQAAATLRSLSQGR 63
N +HS D + L+ + N A +A A+ S +
Sbjct: 495 GNSSGFTGNGDGQSMNRLGNKFGPGLHSSFLDPSQIQLLQTADNCARRALASPSGYSLSK 554
Query: 62 NCIGTSHGFVDLQ--YLERI 9
N GT HG ++ Q YLE I
Sbjct: 555 NNFGTLHGELEGQRAYLEAI 574
>ref|XP_006606261.1| PREDICTED: pumilio homolog 4-like isoform X1 [Glycine max]
gi|571568627|ref|XP_006606262.1| PREDICTED: pumilio
homolog 4-like isoform X2 [Glycine max]
Length = 983
Score = 85.9 bits (211), Expect = 2e-14
Identities = 100/379 (26%), Positives = 169/379 (44%), Gaps = 29/379 (7%)
Frame = -2
Query: 1055 RKTALRNLSRKSSTESLAA-LGGMPMKSGMGM--RRKSFADIVQ-EGPGQSSASPHRLSR 888
RK++ N+SR+ S++ L + G+ SG G+ RR F DI+Q EG Q + +SR
Sbjct: 181 RKSSGWNVSRQGSSQMLDRHMDGLTRMSGAGLGGRRTGFNDILQQEGLEQPAPLSSTMSR 240
Query: 887 PPSYNSFSEMLDTADILNTSSSTDSLHKTESFEALHPIQXXXXXXXXXXXPNSFSGA-GS 711
P S+N+F +++ + I++ S + L + S L +Q +SF+ A G+
Sbjct: 241 PASHNAFGDIMGSTGIVDRESF-EGLRSSASTPGLVGLQNHSLNLS-----HSFAPAVGT 294
Query: 710 SSTKTRTAEPHSSLRSPPGFPAVRSQVPVDGEQNIARS--NPHVSPSGKTQISDILTSFQ 537
S ++ +T E R P A + V +NI H S T ++D+++S
Sbjct: 295 SPSRVKTPEAQVIGR-PVASAASQMGNKVFSVENIGMGLGTQHGHSSNMTDLTDVVSSLA 353
Query: 536 GLSLS-KDHANENALLQSAFEMGLSKANIQNLQQQLNKSRADKYVPPYIGFARENGVVPD 360
GL+LS HA +++LL+S +M + L Q N + R N + +
Sbjct: 354 GLNLSGARHAEQDSLLKSKLQMEVDNHADVLLSTQSN-----------VNLPRRNDIATN 402
Query: 359 VNYLNFDRQVNLPRRTSSSVNLRSLANS-----------------SEFSVLQDPKNKYQG 231
+N + + VNL ++T+SS NLRS +S S + V + Y
Sbjct: 403 LNTFSSNEHVNLLKKTASSANLRSKLHSTGNASSFPNADFTGHVPSAYLVNSKLNSVYNN 462
Query: 230 SHSSSYNLNXXXXXXXXXXGH--SNIHSP--DAHHDEFLEQSTNYASQAAATLRSLSQGR 63
+ ++ L H +HS + H + L+QS++Y+ Q ++ Q R
Sbjct: 463 NLETALRLRRDGQSLDAQGNHVGPELHSSTLNPHLIQCLQQSSDYSMQGMSSSGYPLQMR 522
Query: 62 NCIGTSHGFVDLQYLERIY 6
N SHG DL+ L + Y
Sbjct: 523 NFPDASHG--DLEGLRKAY 539
>ref|XP_002316382.2| pumilio/Puf RNA-binding domain-containing family protein [Populus
trichocarpa] gi|550330425|gb|EEF02553.2| pumilio/Puf
RNA-binding domain-containing family protein [Populus
trichocarpa]
Length = 1001
Score = 85.1 bits (209), Expect = 4e-14
Identities = 106/401 (26%), Positives = 167/401 (41%), Gaps = 53/401 (13%)
Frame = -2
Query: 1049 TALRN-----LSRKSSTESLAALGGMPMKSG--MGMRRKSFADIVQEGPGQSSASPHRLS 891
T LRN L+R +S E L + G +G RRKSFADI+QEG QS++ P L
Sbjct: 163 TELRNSNTTCLTRNASAEWLDRISDSHKLHGSRLGPRRKSFADILQEGLDQSTSIPGHLP 222
Query: 890 RPPSYNSFSEMLDTADILNTSSSTDSLHKTESFEALHPIQXXXXXXXXXXXPNSF----- 726
P S+N+F ++LD + + + L+ ES E LH ++
Sbjct: 223 SPASHNAFGDLLDATGVCDPHQA-GLLYGMESLEGLHSGAATTSFTGNQSRIDTLSHSLV 281
Query: 725 SGAGSSSTKTRTAEPH-SSLRSPPGFPAVRSQV-PVDGEQNIARSNPHVSPSGKTQISDI 552
S GSS +++ T E + + V S+V P++ + S + SG T++ +I
Sbjct: 282 SAVGSSLSRSTTPEQQLGGMSAISNLRHVGSRVGPIEKKNVAGMSFQNDHSSGITELGEI 341
Query: 551 LTSFQGLSL-------SKDHANENALL----QSAFEMGLSKANIQNLQQQLNKSRAD--- 414
S GLSL + H + + F + + Q LQQQL +
Sbjct: 342 GNSLSGLSLLHTRLTDQESHVRHQLQMDLENEPDFPFNVPSSGDQTLQQQLREKSNVVNL 401
Query: 413 KYVPPYIGFARENGVVPDVN--YLNFDRQVNLPRRTSSSVNLRSLANSSEFSVLQDPKNK 240
+ Y NG++P+ N + + +V++ RR +SS NL S NSS L+
Sbjct: 402 SFSTSYTDMPTNNGIIPNRNTSKITSNGEVSISRR-NSSTNLHSKMNSSGLGCLERSHVH 460
Query: 239 YQGSH-------------SSSYNLNXXXXXXXXXXGHSNIH----------SPDAHHDEF 129
Q ++ S+ LN GH H S D + ++
Sbjct: 461 IQNANVPIVDFTGRVPDDYSTQKLNSVIKNHLDKGGHGIGHGFNRLGNQAGSLDPCYPQY 520
Query: 128 LEQSTNYASQAAATLRSLSQGRNCIGTSHGFVDLQYLERIY 6
L++ ++YA+ AT S RN G S G DL +++ Y
Sbjct: 521 LQRISDYATCPVATSSDPSV-RNYFGASDG--DLDRIQKAY 558