BLASTX nr result
ID: Catharanthus22_contig00012976
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus22_contig00012976 (984 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABA95319.1| retrotransposon protein, putative, unclassified [... 145 8e-37 gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e... 148 1e-36 emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group] 151 1e-36 gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group] 143 1e-36 gb|ADB85290.1| putative retrotransposon protein [Phyllostachys e... 157 6e-36 gb|AAP53789.1| retrotransposon protein, putative, unclassified [... 154 8e-36 gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sa... 150 3e-35 ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g... 147 3e-35 gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japo... 147 3e-35 gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putativ... 142 9e-35 emb|CAH66715.1| OSIGBa0118P15.5 [Oryza sativa Indica Group] 142 2e-34 emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera] 140 8e-34 emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group] 144 2e-33 gb|ABA93917.1| retrotransposon protein, putative, unclassified [... 131 5e-33 gb|AAX96125.1| retrotransposon protein, putative, unclassified [... 147 8e-33 ref|NP_001175365.1| Os08g0123950 [Oryza sativa Japonica Group] g... 136 1e-31 gb|AAK55448.1|AC069300_3 putative polyprotein [Oryza sativa Japo... 142 2e-31 emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group] 142 2e-31 emb|CAE04934.2| OSJNBa0017P10.11 [Oryza sativa Japonica Group] 139 3e-31 gb|ABA95357.2| retrotransposon protein, putative, unclassified [... 142 3e-31 >gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 955 Score = 145 bits (366), Expect(4) = 8e-37 Identities = 84/212 (39%), Positives = 119/212 (56%), Gaps = 2/212 (0%) Frame = +3 Query: 78 TTRGYSRVQASYHRAK-LYFWPGMKEHIKEVISCCDTHERNNDDRV*YIVLLQPLPIPEK 254 T G+ ++A+Y R K L++WPG+K+ ++ I C + + V LL PL +P+ Sbjct: 546 TFGGHCGIRATYQRIKKLFYWPGLKKGVENHIRNCPVCQVTKSEHVHIPGLLNPLEVPDM 605 Query: 255 SWIHISMDFFEGLPK*RERDVILVSS**TY*LWSFCGCNSVIFLHRR*QKFSWKIFTGCV 434 +W HISMDF EGLPK + +DVILV F + + Q F I Sbjct: 606 AWTHISMDFVEGLPKSKGKDVILVVVDRLTKYAHFIALSHPYTVEEVVQVFMDNIHKLHG 665 Query: 435 GYHSIVSDK-KIFTSRFWKELFKQLGTKIDMSTACHP*TDGLIERLNYTLETYLRYFCSH 611 +IV+D+ ++FTS F++E+FK ++ STA HP TDG ER+N LE+YLR Sbjct: 666 MPIAIVTDRDRVFTSTFFQEVFKSQKVQLRFSTAYHPQTDGQTERVNQCLESYLRCMTFQ 725 Query: 612 GPHKWAELLFMAEWWYNTTYHATIQMTLFESL 707 P W + +AEWWYNTTYH IQMT F++L Sbjct: 726 EPQNWCSWIALAEWWYNTTYHTAIQMTPFKAL 757 Score = 29.3 bits (64), Expect(4) = 8e-37 Identities = 21/63 (33%), Positives = 32/63 (50%) Frame = +1 Query: 700 KALCGYN*KPPILGIGAYENGSNAALGSMLEERMRIEA*VKENLWKAQERMKQ*ADNGKT 879 KAL GY+ PP + + + LEE+ I +K ++ AQ RMK AD +T Sbjct: 755 KALYGYS--PPQISEFSVPCDVSQEARVTLEEKETIVQKLKASMEDAQRRMKYYADRNRT 812 Query: 880 EKR 888 E++ Sbjct: 813 ERK 815 Score = 23.9 bits (50), Expect(4) = 8e-37 Identities = 9/25 (36%), Positives = 15/25 (60%) Frame = +1 Query: 13 GRIYIDASNNVRQKIINEIHASQQG 87 GRIY+ + +R ++I H+S G Sbjct: 524 GRIYVGETGEIRGQLIQAYHSSTFG 548 Score = 23.5 bits (49), Expect(4) = 8e-37 Identities = 9/16 (56%), Positives = 12/16 (75%) Frame = +2 Query: 884 KENFEVGDLGFLKLQP 931 + EVGD+ +LKLQP Sbjct: 813 ERKLEVGDMVYLKLQP 828 >gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis] Length = 1348 Score = 148 bits (374), Expect(3) = 1e-36 Identities = 84/209 (40%), Positives = 121/209 (57%), Gaps = 2/209 (0%) Frame = +3 Query: 87 GYSRVQASYHRAK-LYFWPGMKEHIKEVISCCDTHERNNDDRV*YIVLLQPLPIPEKSWI 263 G+S A+Y R K L++WPGMK+ I ++ C +R+ + Y LL+PLPIP+ +W Sbjct: 930 GHSGRVATYQRVKHLFYWPGMKKEIHTMVRECAVCQRSKAEHCHYPGLLEPLPIPDMAWT 989 Query: 264 HISMDFFEGLPK*RERDVILVSS**TY*LWSFCGCNSVIFLHRR*QKFSWKIFTGCVGYH 443 HISMDF EGLP + ++VI V + + Q F IF Sbjct: 990 HISMDFIEGLPSSKGKEVIFVVVDRFTKYAHSVPLSHPYSVQLVAQAFIDNIFKLHGFPI 1049 Query: 444 SIVSDK-KIFTSRFWKELFKQLGTKIDMSTACHP*TDGLIERLNYTLETYLRYFCSHGPH 620 +IVSD+ +IFTS+ W+ELFK + ++ STA HP TDG ER+N +E+YLR P Sbjct: 1050 AIVSDRDRIFTSKLWQELFKSMKVQLRFSTAYHPQTDGQTERVNQCVESYLRCMAMQEPK 1109 Query: 621 KWAELLFMAEWWYNTTYHATIQMTLFESL 707 KW L +AEWWYNTT+H ++++ F++L Sbjct: 1110 KWVSWLPLAEWWYNTTFHTALKLSPFQAL 1138 Score = 32.3 bits (72), Expect(3) = 1e-36 Identities = 19/58 (32%), Positives = 31/58 (53%) Frame = +1 Query: 715 YN*KPPILGIGAYENGSNAALGSMLEERMRIEA*VKENLWKAQERMKQ*ADNGKTEKR 888 Y PP++ A + LEE+ + +KENL +AQ RMK+ AD ++E++ Sbjct: 1139 YGFPPPLINEVAIPGPEDNEARDFLEEKQVMLRRLKENLAQAQTRMKKYADLNRSERQ 1196 Score = 20.8 bits (42), Expect(3) = 1e-36 Identities = 7/18 (38%), Positives = 12/18 (66%) Frame = +2 Query: 878 QKKENFEVGDLGFLKLQP 931 + + VGD+ +LK+QP Sbjct: 1192 RSERQLTVGDMVYLKMQP 1209 >emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group] Length = 1311 Score = 151 bits (382), Expect(3) = 1e-36 Identities = 86/209 (41%), Positives = 119/209 (56%), Gaps = 2/209 (0%) Frame = +3 Query: 87 GYSRVQASYHRAKL-YFWPGMKEHIKEVISCCDTHERNNDDRV*YIVLLQPLPIPEKSWI 263 G+S +A+Y RAKL ++WPGMK+ I + C ++N + LL PLPIPE +W Sbjct: 905 GHSGERATYQRAKLLFYWPGMKKDIASYVKLCPVCQKNKSEHNLQPGLLHPLPIPEMAWT 964 Query: 264 HISMDFFEGLPK*RERDVILVSS**TY*LWSFCGCNSVIFLHRR*QKFSWKIFTGCVGYH 443 HISMDF EGLPK +DVI V F + + +F + Sbjct: 965 HISMDFIEGLPKSDNKDVIWVIVDRFTKYAHFVALSHPFTADQIVTQFVENYYKHHGLPA 1024 Query: 444 SIVSDK-KIFTSRFWKELFKQLGTKIDMSTACHP*TDGLIERLNYTLETYLRYFCSHGPH 620 IVSD+ +IFTS+ WK++F++ G K+ S+A HP TDG ER+N LE YLR P Sbjct: 1025 VIVSDRDRIFTSQTWKDVFEKAGVKLHFSSAYHPQTDGQTERVNQCLENYLRCMTFTKPK 1084 Query: 621 KWAELLFMAEWWYNTTYHATIQMTLFESL 707 KW LL A+WWYNT++H T+ MT +++L Sbjct: 1085 KWKSLLAYAKWWYNTSFHTTLGMTPYQAL 1113 Score = 28.9 bits (63), Expect(3) = 1e-36 Identities = 18/53 (33%), Positives = 25/53 (47%) Frame = +1 Query: 727 PPILGIGAYENGSNAALGSMLEERMRIEA*VKENLWKAQERMKQ*ADNGKTEK 885 PP+L + E + I A +K +L KAQ RMK AD +TE+ Sbjct: 1118 PPLLAESFLSPSLFTDARNKAEAKSVITAAIKSSLLKAQARMKHFADMNRTER 1170 Score = 21.2 bits (43), Expect(3) = 1e-36 Identities = 9/22 (40%), Positives = 14/22 (63%) Frame = +2 Query: 899 VGDLGFLKLQPEDRRNLKQETS 964 VGD+ +LK+QP +L +S Sbjct: 1174 VGDMVYLKMQPYRHNSLGLHSS 1195 >gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1475 Score = 143 bits (361), Expect(4) = 1e-36 Identities = 83/209 (39%), Positives = 119/209 (56%), Gaps = 2/209 (0%) Frame = +3 Query: 87 GYSRVQASYHRAK-LYFWPGMKEHIKEVISCCDTHERNNDDRV*YIVLLQPLPIPEKSWI 263 G+S ++A++HR K L++W GM+ ++ I C T + + V LL PL IP+ +W Sbjct: 1069 GHSGMRATHHRIKMLFYWHGMRGEVERFIRECPTCQITKSEHVHIPGLLNPLEIPDMAWT 1128 Query: 264 HISMDFFEGLPK*RERDVILVSS**TY*LWSFCGCNSVIFLHRR*QKFSWKIFTGCVGYH 443 HI+MDF EGLPK + +DVILV F + + + F I Sbjct: 1129 HITMDFIEGLPKSQGKDVILVVVDRLTKYAHFIALAHPYDVEQVVEAFMNNIHKLHGMPM 1188 Query: 444 SIVSDK-KIFTSRFWKELFKQLGTKIDMSTACHP*TDGLIERLNYTLETYLRYFCSHGPH 620 I++D+ +IFTS ++E+FK + K+ STA HP DG ER+N LE+YLR PH Sbjct: 1189 VIITDRDRIFTSSLFQEIFKAMKVKLRFSTAYHPQMDGQTERVNQCLESYLRNMTFQEPH 1248 Query: 621 KWAELLFMAEWWYNTTYHATIQMTLFESL 707 KW L +AEWWYNTT+H IQMT F+++ Sbjct: 1249 KWYSWLALAEWWYNTTFHTAIQMTPFKAM 1277 Score = 27.7 bits (60), Expect(4) = 1e-36 Identities = 20/62 (32%), Positives = 31/62 (50%) Frame = +1 Query: 700 KALCGYN*KPPILGIGAYENGSNAALGSMLEERMRIEA*VKENLWKAQERMKQ*ADNGKT 879 KA+ GY+ PP + + + +EE+ I +K +L AQ RMK AD +T Sbjct: 1275 KAMYGYS--PPQINEFSVPCNISEEARVTIEEKEAILNKLKNSLADAQHRMKYFADKNRT 1332 Query: 880 EK 885 E+ Sbjct: 1333 ER 1334 Score = 25.8 bits (55), Expect(4) = 1e-36 Identities = 9/25 (36%), Positives = 17/25 (68%) Frame = +1 Query: 13 GRIYIDASNNVRQKIINEIHASQQG 87 GRIY+ + ++R+++I H+S G Sbjct: 1044 GRIYVGEATDIRRQLITTYHSSSFG 1068 Score = 24.3 bits (51), Expect(4) = 1e-36 Identities = 9/16 (56%), Positives = 13/16 (81%) Frame = +2 Query: 884 KENFEVGDLGFLKLQP 931 + N EVGD+ +LKL+P Sbjct: 1333 ERNLEVGDMVYLKLKP 1348 >gb|ADB85290.1| putative retrotransposon protein [Phyllostachys edulis] Length = 592 Score = 157 bits (397), Expect = 6e-36 Identities = 89/215 (41%), Positives = 125/215 (58%), Gaps = 8/215 (3%) Frame = +3 Query: 87 GYSRVQASYHRAKLYF-WPGMKEHIKEVISCCDTHERNNDDRV*YIVLLQPLPIPEKSWI 263 G+S + +Y R KL F WP MK+ ++E + D ++NN + V Y LLQP+PIPE +W Sbjct: 315 GHSGGRVTYQRLKLIFHWPRMKQEVEEFVKLYDVCQKNNCEHVPYPGLLQPIPIPEMAWT 374 Query: 264 HISMDFFEGLPK*RERDVILVSS**TY*LWSFCGCNSVIFL-HRR*QKFSWKIFTGCVGY 440 HISMDF EGLPK +++VILV + F + I L H + K+F V Sbjct: 375 HISMDFIEGLPKSEDKEVILVV------VDRFTKYSHFIALSHPFTVQHVVKVFVDNVFK 428 Query: 441 HS------IVSDKKIFTSRFWKELFKQLGTKIDMSTACHP*TDGLIERLNYTLETYLRYF 602 H I + +FTS W++LFK LG K+ +ST+ HP TDG +R+N LE YLR Sbjct: 429 HHGLPSVIITNRDMVFTSHLWQDLFKTLGVKLRLSTSYHPETDGQTKRVNQCLEGYLRCM 488 Query: 603 CSHGPHKWAELLFMAEWWYNTTYHATIQMTLFESL 707 P KW L AEWWY+T++H +++MT F++L Sbjct: 489 VFANPKKWCSWLSTAEWWYDTSFHTSLKMTPFQAL 523 >gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1611 Score = 154 bits (389), Expect(2) = 8e-36 Identities = 87/209 (41%), Positives = 123/209 (58%), Gaps = 2/209 (0%) Frame = +3 Query: 87 GYSRVQASYHRAK-LYFWPGMKEHIKEVISCCDTHERNNDDRV*YIVLLQPLPIPEKSWI 263 G+S ++A+YHR K L++WPG+K+ ++ I C T + + + LL PL +P+ +W Sbjct: 1205 GHSGIRATYHRIKQLFYWPGLKKQVEHYIRECPTCQITKAEHIHIPGLLNPLEVPDMAWT 1264 Query: 264 HISMDFFEGLPK*RERDVILVSS**TY*LWSFCGCNSVIFLHRR*QKFSWKIFTGCVGYH 443 HI+MDF EGLPK + +DVILV F + + + Q F I Sbjct: 1265 HITMDFIEGLPKSQGKDVILVVVDRLTKYAHFLALSHPYTVEQVVQIFMDNIHKLHGMPM 1324 Query: 444 SIVSDK-KIFTSRFWKELFKQLGTKIDMSTACHP*TDGLIERLNYTLETYLRYFCSHGPH 620 IV+D+ ++FTS F++E+FK K+ STA HP TDG ER+N LE+YLR P Sbjct: 1325 VIVTDRDRVFTSNFFQEIFKTQKVKLRFSTAHHPQTDGQTERVNQCLESYLRSMTFQEPQ 1384 Query: 621 KWAELLFMAEWWYNTTYHATIQMTLFESL 707 KW L +AEWWYNTTYH +IQMT F++L Sbjct: 1385 KWFSWLALAEWWYNTTYHTSIQMTPFQAL 1413 Score = 23.9 bits (50), Expect(2) = 8e-36 Identities = 9/25 (36%), Positives = 14/25 (56%) Frame = +1 Query: 13 GRIYIDASNNVRQKIINEIHASQQG 87 GRIY+ + +R ++ HAS G Sbjct: 1180 GRIYVGETTEIRMLLLEAYHASYFG 1204 >gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sativa Japonica Group] Length = 1608 Score = 150 bits (380), Expect(2) = 3e-35 Identities = 87/209 (41%), Positives = 120/209 (57%), Gaps = 2/209 (0%) Frame = +3 Query: 87 GYSRVQASYHRAK-LYFWPGMKEHIKEVISCCDTHERNNDDRV*YIVLLQPLPIPEKSWI 263 G+S +Y + K L+ WPGMK+ IKE + C + DR Y LLQPLP+P +W Sbjct: 1134 GHSGFPVTYRKVKSLFAWPGMKKLIKEQLQSCQVCLQAKPDRARYPGLLQPLPVPAGAWQ 1193 Query: 264 HISMDFFEGLPK*RERDVILVSS**TY*LWSFCGCNSVIFLHRR*QKFSWKIFTGCVGYH 443 IS+DF EGLP+ + ILV F + Q+F I+ Sbjct: 1194 TISLDFIEGLPRSSHYNCILVVVDKFSKYSHFIPLSHPFNAGGVAQEFMKNIYKLHGLPR 1253 Query: 444 SIVSDK-KIFTSRFWKELFKQLGTKIDMSTACHP*TDGLIERLNYTLETYLRYFCSHGPH 620 +I+SD+ KIFTS+FW +LF + GT + MS+A HP +DG ER+N LE YLR F PH Sbjct: 1254 AIISDRDKIFTSQFWDQLFSKFGTDLHMSSAYHPQSDGQTERVNQCLEIYLRCFVHAAPH 1313 Query: 621 KWAELLFMAEWWYNTTYHATIQMTLFESL 707 KW+ L++AE+WYNT++H+T+ T FE L Sbjct: 1314 KWSSWLYLAEFWYNTSFHSTLNKTPFEVL 1342 Score = 25.4 bits (54), Expect(2) = 3e-35 Identities = 8/25 (32%), Positives = 18/25 (72%) Frame = +1 Query: 13 GRIYIDASNNVRQKIINEIHASQQG 87 G+I++ + ++ K++NE+HA+ G Sbjct: 1109 GKIWVGNNTALQHKLVNELHATPLG 1133 >ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa Japonica Group] Length = 866 Score = 147 bits (371), Expect(3) = 3e-35 Identities = 85/209 (40%), Positives = 119/209 (56%), Gaps = 2/209 (0%) Frame = +3 Query: 87 GYSRVQASYHRAK-LYFWPGMKEHIKEVISCCDTHERNNDDRV*YIVLLQPLPIPEKSWI 263 G+S +A+Y R K L++WPGMK + + + C ++N + LLQPLP+PE +W Sbjct: 460 GHSGERATYQRMKQLFYWPGMKLAVTQFVKACPVCQKNKTEHNMPAGLLQPLPLPEMAWS 519 Query: 264 HISMDFFEGLPK*RERDVILVSS**TY*LWSFCGCNSVIFLHRR*QKFSWKIFTGCVGYH 443 HI+MDF EGLPK +DVI V F + + +F + Sbjct: 520 HITMDFVEGLPKSEGKDVIWVIVDRFTKYAHFIPLSHPFTADQILTQFLEHFYKLHGLPT 579 Query: 444 SIVSDK-KIFTSRFWKELFKQLGTKIDMSTACHP*TDGLIERLNYTLETYLRYFCSHGPH 620 IVSD+ +IFTS WKE+F++ G K+ S+A HP TDG ER+N LE YLR S P Sbjct: 580 VIVSDRDRIFTSSTWKEVFEKAGVKLHFSSAYHPQTDGQSERVNQCLENYLRCMTSSKPR 639 Query: 621 KWAELLFMAEWWYNTTYHATIQMTLFESL 707 KW LL AEWWYNTT+H ++ M+ +++L Sbjct: 640 KWKALLPHAEWWYNTTFHTSLGMSPYQAL 668 Score = 25.0 bits (53), Expect(3) = 3e-35 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 7/43 (16%) Frame = +1 Query: 778 GSMLE-ERMRIEA*------VKENLWKAQERMKQ*ADNGKTEK 885 GS+LE ER + EA +K +L KAQ RMK AD + E+ Sbjct: 683 GSLLEGERNKQEAKAALLETIKSHLVKAQARMKYFADQHRQER 725 Score = 24.3 bits (51), Expect(3) = 3e-35 Identities = 10/29 (34%), Positives = 18/29 (62%) Frame = +2 Query: 878 QKKENFEVGDLGFLKLQPEDRRNLKQETS 964 +++ EVGD+ +LK+QP +L +S Sbjct: 722 RQERTLEVGDMVYLKMQPYRHNSLGLHSS 750 >gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japonica Group] Length = 645 Score = 147 bits (371), Expect(3) = 3e-35 Identities = 85/209 (40%), Positives = 119/209 (56%), Gaps = 2/209 (0%) Frame = +3 Query: 87 GYSRVQASYHRAK-LYFWPGMKEHIKEVISCCDTHERNNDDRV*YIVLLQPLPIPEKSWI 263 G+S +A+Y R K L++WPGMK + + + C ++N + LLQPLP+PE +W Sbjct: 239 GHSGERATYQRMKQLFYWPGMKLAVTQFVKACPVCQKNKTEHNMPAGLLQPLPLPEMAWS 298 Query: 264 HISMDFFEGLPK*RERDVILVSS**TY*LWSFCGCNSVIFLHRR*QKFSWKIFTGCVGYH 443 HI+MDF EGLPK +DVI V F + + +F + Sbjct: 299 HITMDFVEGLPKSEGKDVIWVIVDRFTKYAHFIPLSHPFTADQILTQFLEHFYKLHGLPT 358 Query: 444 SIVSDK-KIFTSRFWKELFKQLGTKIDMSTACHP*TDGLIERLNYTLETYLRYFCSHGPH 620 IVSD+ +IFTS WKE+F++ G K+ S+A HP TDG ER+N LE YLR S P Sbjct: 359 VIVSDRDRIFTSSTWKEVFEKAGVKLHFSSAYHPQTDGQSERVNQCLENYLRCMTSSKPR 418 Query: 621 KWAELLFMAEWWYNTTYHATIQMTLFESL 707 KW LL AEWWYNTT+H ++ M+ +++L Sbjct: 419 KWKALLPHAEWWYNTTFHTSLGMSPYQAL 447 Score = 25.0 bits (53), Expect(3) = 3e-35 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 7/43 (16%) Frame = +1 Query: 778 GSMLE-ERMRIEA*------VKENLWKAQERMKQ*ADNGKTEK 885 GS+LE ER + EA +K +L KAQ RMK AD + E+ Sbjct: 462 GSLLEGERNKQEAKAALLETIKSHLVKAQARMKYFADQHRQER 504 Score = 24.3 bits (51), Expect(3) = 3e-35 Identities = 10/29 (34%), Positives = 18/29 (62%) Frame = +2 Query: 878 QKKENFEVGDLGFLKLQPEDRRNLKQETS 964 +++ EVGD+ +LK+QP +L +S Sbjct: 501 RQERTLEVGDMVYLKMQPYRHNSLGLHSS 529 >gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana] Length = 1447 Score = 142 bits (359), Expect(3) = 9e-35 Identities = 90/214 (42%), Positives = 115/214 (53%), Gaps = 4/214 (1%) Frame = +3 Query: 72 CFTTRGYSRVQASYHRAK-LYFWPGMKEHIKEVISCCDTHERNNDDRV*YIVLLQPLPIP 248 C G S AS+ R K L++W GM + I+ I C T ++ D Y LLQPLPIP Sbjct: 1061 CSGMGGRSGRDASHQRVKSLFYWKGMVKDIQAFIRSCGTCQQCKSDNAAYPGLLQPLPIP 1120 Query: 249 EKSWIHISMDFFEGLPK*RERDVILVSS**TY*LWSFCGCNSVIFLHRR*QKFSWKIFT- 425 +K W +SMDF EGLP + VI+V F Q F ++ Sbjct: 1121 DKIWCDVSMDFIEGLPNSGGKSVIMVVVDRLSKAAHFVALAHPYSALTVAQAFLDNVYKH 1180 Query: 426 -GCVGYHSIVSDKKI-FTSRFWKELFKQLGTKIDMSTACHP*TDGLIERLNYTLETYLRY 599 GC SIVSD+ + FTS FWKE FK G ++ MS+A HP +DG E +N LE YLR Sbjct: 1181 HGCPT--SIVSDRDVLFTSDFWKEFFKLQGVELRMSSAYHPQSDGQTEVVNRCLENYLRC 1238 Query: 600 FCSHGPHKWAELLFMAEWWYNTTYHATIQMTLFE 701 C PH W + L +AE+WYNT YH++ QMT FE Sbjct: 1239 MCHARPHLWNKWLPLAEYWYNTNYHSSSQMTPFE 1272 Score = 30.0 bits (66), Expect(3) = 9e-35 Identities = 16/39 (41%), Positives = 24/39 (61%) Frame = +1 Query: 769 AALGSMLEERMRIEA*VKENLWKAQERMKQ*ADNGKTEK 885 A + L+ER + +K +L +AQ RMKQ AD +TE+ Sbjct: 1293 AVVARSLQERENMLLFLKFHLMRAQHRMKQFADQHRTER 1331 Score = 22.3 bits (46), Expect(3) = 9e-35 Identities = 7/16 (43%), Positives = 12/16 (75%) Frame = +2 Query: 884 KENFEVGDLGFLKLQP 931 + F++GD ++KLQP Sbjct: 1330 ERTFDIGDFVYVKLQP 1345 >emb|CAH66715.1| OSIGBa0118P15.5 [Oryza sativa Indica Group] Length = 1434 Score = 142 bits (357), Expect(3) = 2e-34 Identities = 77/209 (36%), Positives = 116/209 (55%), Gaps = 1/209 (0%) Frame = +3 Query: 84 RGYSRVQASYHRAK-LYFWPGMKEHIKEVISCCDTHERNNDDRV*YIVLLQPLPIPEKSW 260 RG+S V+ +YHR K +++WP +K+ +++++S C T + + V LL PL IPE +W Sbjct: 1072 RGHSGVKVTYHRIKKIFYWPQLKKEVEKIVSECPTCQITKAEHVHSPGLLDPLQIPEMAW 1131 Query: 261 IHISMDFFEGLPK*RERDVILVSS**TY*LWSFCGCNSVIFLHRR*QKFSWKIFTGCVGY 440 HISMDF EGLPK + +D+ + + ++ G VI R Sbjct: 1132 THISMDFIEGLPKSQGKDIFMEN------VYRLHGMPLVIVFDR---------------- 1169 Query: 441 HSIVSDKKIFTSRFWKELFKQLGTKIDMSTACHP*TDGLIERLNYTLETYLRYFCSHGPH 620 KIFTS ++ +FK +GT + ST+ HP +DG ER+N +E YLR P Sbjct: 1170 ------DKIFTSDLFQNVFKSMGTTLRFSTSYHPQSDGQTERVNQCVEAYLRCMVFQEPR 1223 Query: 621 KWAELLFMAEWWYNTTYHATIQMTLFESL 707 W + L AEWWYNT+YH ++Q+T +E+L Sbjct: 1224 DWHKWLPTAEWWYNTSYHTSLQVTPYEAL 1252 Score = 30.0 bits (66), Expect(3) = 2e-34 Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 7/58 (12%) Frame = +1 Query: 733 ILGIGAYENGSNAALGSMLEE-------RMRIEA*VKENLWKAQERMKQ*ADNGKTEK 885 + G+ +NG A G++ EE R + +K+NL +AQ R+K+ AD ++E+ Sbjct: 1252 LYGVHPPQNGEQAIPGNVTEEIRITAQQREELMLRLKDNLLRAQNRIKKFADRLRSER 1309 Score = 22.3 bits (46), Expect(3) = 2e-34 Identities = 7/18 (38%), Positives = 14/18 (77%) Frame = +2 Query: 878 QKKENFEVGDLGFLKLQP 931 + + +F+ GD+ +LK+QP Sbjct: 1306 RSERSFQEGDMVYLKMQP 1323 >emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera] Length = 1469 Score = 140 bits (354), Expect(2) = 8e-34 Identities = 84/209 (40%), Positives = 114/209 (54%), Gaps = 2/209 (0%) Frame = +3 Query: 87 GYSRVQASYHRAKL-YFWPGMKEHIKEVISCCDTHERNNDDRV*YIVLLQPLPIPEKSWI 263 G+S + HRAK ++W GM++ ++ I CD ++N + + LLQPLPIP K W Sbjct: 1060 GHSGFHKTLHRAKSEFYWEGMRKEVRRFIKECDICQQNKSENIHPAGLLQPLPIPTKVWT 1119 Query: 264 HISMDFFEGLPK*RERDVILVSS**TY*LWSFCGCNSVIFLHRR*QKFSWKIFTGCVGYH 443 IS+DF EGLP VI+V F + + Q F IF + Sbjct: 1120 DISLDFIEGLPNSESYSVIMVVVDRLSKYAHFIPISHPYTASKIAQVFLANIFKLHGLPN 1179 Query: 444 SIVSDKK-IFTSRFWKELFKQLGTKIDMSTACHP*TDGLIERLNYTLETYLRYFCSHGPH 620 SIV+D+ FTS FWKELFK GT + S+A HP TDG E +N +E YLR F P Sbjct: 1180 SIVTDRDPTFTSTFWKELFKLQGTTLKFSSAYHPQTDGQTEIVNKMVEQYLRCFSGDKPK 1239 Query: 621 KWAELLFMAEWWYNTTYHATIQMTLFESL 707 W + L +AEWWYNT HA+ +++ FES+ Sbjct: 1240 GWVKWLPLAEWWYNTNIHASTKLSPFESV 1268 Score = 30.8 bits (68), Expect(2) = 8e-34 Identities = 12/29 (41%), Positives = 21/29 (72%) Frame = +1 Query: 1 IYKDGRIYIDASNNVRQKIINEIHASQQG 87 ++ GR+YI AS +R++I+ +H+S QG Sbjct: 1031 LFYKGRLYIPASKELREQILYLLHSSPQG 1059 >emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group] Length = 1586 Score = 144 bits (364), Expect(2) = 2e-33 Identities = 81/209 (38%), Positives = 122/209 (58%), Gaps = 2/209 (0%) Frame = +3 Query: 87 GYSRVQASYHRAK-LYFWPGMKEHIKEVISCCDTHERNNDDRV*YIVLLQPLPIPEKSWI 263 G+S ++A+YHR K L++WPG+K+ ++ I C + + + LL PL +P+ +W Sbjct: 1180 GHSGMRATYHRIKSLFYWPGLKKAVEGFIRECPICQVTKAEHIHIPGLLDPLEVPDMAWA 1239 Query: 264 HISMDFFEGLPK*RERDVILVSS**TY*LWSFCGCNSVIFLHRR*QKFSWKIFTGCVGYH 443 HI+MDF EGLPK +DVILV F + + + F I Sbjct: 1240 HITMDFVEGLPKSNGKDVILVVVDRLTKYAHFIAMAHPYTVEQVVELFMNNIHRLHGMPM 1299 Query: 444 SIVSDK-KIFTSRFWKELFKQLGTKIDMSTACHP*TDGLIERLNYTLETYLRYFCSHGPH 620 +I++D+ +IFTS+ ++E+FK + ++ ST+ HP TDG ER+N LE+YLR P Sbjct: 1300 AIITDRDRIFTSQLFQEIFKSMKVRLKFSTSYHPQTDGQTERVNQCLESYLRSMTFQEPT 1359 Query: 621 KWAELLFMAEWWYNTTYHATIQMTLFESL 707 +W L +AEWWYNTTYH +IQMT F++L Sbjct: 1360 RWHSWLALAEWWYNTTYHTSIQMTPFQAL 1388 Score = 25.8 bits (55), Expect(2) = 2e-33 Identities = 9/25 (36%), Positives = 16/25 (64%) Frame = +1 Query: 13 GRIYIDASNNVRQKIINEIHASQQG 87 GRIY+ + +R+++I H+S G Sbjct: 1155 GRIYVGENTEIREELIRSYHSSAFG 1179 >gb|ABA93917.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1091 Score = 131 bits (330), Expect(3) = 5e-33 Identities = 78/209 (37%), Positives = 114/209 (54%), Gaps = 2/209 (0%) Frame = +3 Query: 87 GYSRVQASYHRA-KLYFWPGMKEHIKEVISCCDTHERNNDDRV*YIVLLQPLPIPEKSWI 263 G+S V +Y R +L+ WPG++ + + + CD +R + V Y +LQPLP+P+ +W Sbjct: 629 GHSGVNVTYQRVLQLFAWPGLRSSVAKSVQACDICQRAKSEHVRYPSMLQPLPVPDHAWQ 688 Query: 264 HISMDFFEGLPK*RERDVILVSS**TY*LWSFCGCNSVIFLHRR*QKFSWKIFTGCVGYH 443 +S+DF EGL K + ILV F + F I Sbjct: 689 IVSLDFIEGLSKSASFNCILVVVDKFSKYSHFVPLAHPFTALDVAEAFMQHIHRLHGLPQ 748 Query: 444 SIVSDK-KIFTSRFWKELFKQLGTKIDMSTACHP*TDGLIERLNYTLETYLRYFCSHGPH 620 SI+SD+ +IFTS W LF GT++ MS++ HP TDG ER+N LET+LR F P Sbjct: 749 SIISDRDRIFTSTLWTTLFCLAGTQLQMSSSYHPQTDGQTERVNQCLETFLRCFVHACPS 808 Query: 621 KWAELLFMAEWWYNTTYHATIQMTLFESL 707 W + L +AE+WYNT++H+++ MT FE L Sbjct: 809 HWTKWLALAEYWYNTSFHSSLGMTPFEVL 837 Score = 35.0 bits (79), Expect(3) = 5e-33 Identities = 18/57 (31%), Positives = 31/57 (54%) Frame = +1 Query: 715 YN*KPPILGIGAYENGSNAALGSMLEERMRIEA*VKENLWKAQERMKQ*ADNGKTEK 885 Y KP G+ + L L +R +++ ++E+L +AQ RMK AD G++E+ Sbjct: 838 YGHKPRYFGLSTNAACLSPELTDWLHDRAKMQNLIREHLLRAQTRMKMQADKGRSER 894 Score = 22.7 bits (47), Expect(3) = 5e-33 Identities = 9/18 (50%), Positives = 13/18 (72%) Frame = +2 Query: 878 QKKENFEVGDLGFLKLQP 931 + + +F VGD +LKLQP Sbjct: 891 RSERSFAVGDWVYLKLQP 908 >gb|AAX96125.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] gi|77550700|gb|ABA93497.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1448 Score = 147 bits (370), Expect = 8e-33 Identities = 88/209 (42%), Positives = 118/209 (56%), Gaps = 2/209 (0%) Frame = +3 Query: 87 GYSRVQASYHRAK-LYFWPGMKEHIKEVISCCDTHERNNDDRV*YIVLLQPLPIPEKSWI 263 G+S +Y R K L+ WP MK+ IK + C ++ DR Y LLQPL +P +W Sbjct: 978 GHSGFPVTYRRIKTLFAWPDMKKQIKLKVKECSICQQAKPDRFRYPGLLQPLLVPSGAWQ 1037 Query: 264 HISMDFFEGLPK*RERDVILVSS**TY*LWSFCGCNSVIFLHRR*QKFSWKIFTGCVGYH 443 ++MDF EGLPK R + I+V F Q + +F Sbjct: 1038 TVTMDFIEGLPKSRRFNCIMVVVDKLSRYAHFLPLAHPFSAADVAQLYMEGVFKLHGLPL 1097 Query: 444 SIVSDK-KIFTSRFWKELFKQLGTKIDMSTACHP*TDGLIERLNYTLETYLRYFCSHGPH 620 ++VSD KIFTS FW++LF+ + TK+ MSTA HP TDG ER+N LETYLR F P Sbjct: 1098 AVVSDHDKIFTSNFWEQLFQSVSTKLHMSTAYHPQTDGQTERVNQCLETYLRCFTHSCPS 1157 Query: 621 KWAELLFMAEWWYNTTYHATIQMTLFESL 707 KW+ L++AE+WYNTTYH+T++ T FE L Sbjct: 1158 KWSTWLYLAEYWYNTTYHSTLEQTPFEVL 1186 >ref|NP_001175365.1| Os08g0123950 [Oryza sativa Japonica Group] gi|255678117|dbj|BAH94093.1| Os08g0123950, partial [Oryza sativa Japonica Group] Length = 783 Score = 136 bits (342), Expect(2) = 1e-31 Identities = 83/209 (39%), Positives = 113/209 (54%), Gaps = 2/209 (0%) Frame = +3 Query: 87 GYSRVQASYHRAK-LYFWPGMKEHIKEVISCCDTHERNNDDRV*YIVLLQPLPIPEKSWI 263 G+S +Y R K L+ W GMK IKE ++ C + DR Y LLQPLP+P+ +W Sbjct: 303 GHSGFPVTYRRIKQLFAWNGMKSQIKETLANCQICAQAKPDRSRYPRLLQPLPVPKGAWQ 362 Query: 264 HISMDFFEGLPK*RERDVILVSS**TY*LWSFCGCNSVIFLHRR*QKFSWKIFTGCVGYH 443 IS+DF EGLP+ + ILV F + F ++ Sbjct: 363 TISLDFIEGLPRSSHYNCILVVVDKFSKYSHFIPLRHPFTAIDVAKAFMSNVYKLHGLPQ 422 Query: 444 SIVSDK-KIFTSRFWKELFKQLGTKIDMSTACHP*TDGLIERLNYTLETYLRYFCSHGPH 620 I+SD+ KIFTS+ W++LF + GTK+ S+A HP +DG ER N LE YL+ F P Sbjct: 423 IIISDRDKIFTSQLWEQLFLRSGTKLHYSSAYHPQSDGQTERGNQCLEIYLKCFVQSAPS 482 Query: 621 KWAELLFMAEWWYNTTYHATIQMTLFESL 707 KW L +AE+WYN +YH+TI T FE+L Sbjct: 483 KWPSWLHLAEYWYNNSYHSTIDRTPFEAL 511 Score = 27.7 bits (60), Expect(2) = 1e-31 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = +1 Query: 13 GRIYIDASNNVRQKIINEIHASQQG 87 G I+I S +++ KIINE+HAS G Sbjct: 278 GNIWIGNSPDLQLKIINEMHASPVG 302 >gb|AAK55448.1|AC069300_3 putative polyprotein [Oryza sativa Japonica Group] gi|31433481|gb|AAP54986.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1409 Score = 142 bits (359), Expect = 2e-31 Identities = 79/205 (38%), Positives = 121/205 (59%), Gaps = 2/205 (0%) Frame = +3 Query: 99 VQASYHRAK-LYFWPGMKEHIKEVISCCDTHERNNDDRV*YIVLLQPLPIPEKSWIHISM 275 ++A+YHR K L++W G+K+ +++ I C + + V LL PL +P+ +W HI+M Sbjct: 1105 MRATYHRIKSLFYWLGLKKVVEQFIRECPVCQVTKAEHVHIPGLLNPLEVPDMAWTHITM 1164 Query: 276 DFFEGLPK*RERDVILVSS**TY*LWSFCGCNSVIFLHRR*QKFSWKIFTGCVGYHSIVS 455 DF EGLPK + +DVILV F + + + F I +I++ Sbjct: 1165 DFIEGLPKSKGKDVILVVVDRLTKYAHFLALTHPYSVEQVVEVFMDNIHKLHGMPMAIIT 1224 Query: 456 DK-KIFTSRFWKELFKQLGTKIDMSTACHP*TDGLIERLNYTLETYLRYFCSHGPHKWAE 632 D+ +IFTS+ ++E+FK + ++ STA HP TDG ER+N LE+YLR PH+W Sbjct: 1225 DRDRIFTSQLFQEVFKAMKVQLRFSTAYHPQTDGQTERVNQCLESYLRSMAFQEPHQWYS 1284 Query: 633 LLFMAEWWYNTTYHATIQMTLFESL 707 L +AEWWYNTTYH ++QMT F+++ Sbjct: 1285 WLALAEWWYNTTYHTSLQMTPFQAM 1309 >emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group] Length = 1602 Score = 142 bits (358), Expect = 2e-31 Identities = 86/209 (41%), Positives = 117/209 (55%), Gaps = 2/209 (0%) Frame = +3 Query: 87 GYSRVQASYHRAK-LYFWPGMKEHIKEVISCCDTHERNNDDRV*YIVLLQPLPIPEKSWI 263 G+S +Y + K L+ WP MK+ IKE + C + DR+ Y LLQPLP+PE SW Sbjct: 1118 GHSGFPVTYRKIKQLFAWPNMKKMIKESVQRCQVCLQAKPDRLKYPGLLQPLPVPEGSWQ 1177 Query: 264 HISMDFFEGLPK*RERDVILVSS**TY*LWSFCGCNSVIFLHRR*QKFSWKIFTGCVGYH 443 +S+DF EGLPK + ILV F Q + + I+ Sbjct: 1178 AVSLDFIEGLPKSAGYNCILVVVDRFSKYAHFVALKHPFTAIDVAQAYMFHIYKLHGLPQ 1237 Query: 444 SIVSDK-KIFTSRFWKELFKQLGTKIDMSTACHP*TDGLIERLNYTLETYLRYFCSHGPH 620 +IVSD+ KIFTS+ W++LF + GTK+ S+A HP +DG ER+N LE YLR F P Sbjct: 1238 TIVSDRDKIFTSQLWEQLFLRAGTKLHYSSAYHPQSDGQTERVNQCLEIYLRCFVHSTPS 1297 Query: 621 KWAELLFMAEWWYNTTYHATIQMTLFESL 707 KW L +AE+WYN+TYH+++ T FE L Sbjct: 1298 KWYSWLHLAEYWYNSTYHSSLGTTPFEVL 1326 >emb|CAE04934.2| OSJNBa0017P10.11 [Oryza sativa Japonica Group] Length = 1012 Score = 139 bits (350), Expect(2) = 3e-31 Identities = 84/209 (40%), Positives = 117/209 (55%), Gaps = 2/209 (0%) Frame = +3 Query: 87 GYSRVQASYHRAK-LYFWPGMKEHIKEVISCCDTHERNNDDRV*YIVLLQPLPIPEKSWI 263 G+S + +Y RAK L+ WP MK+ I ++ C ++ DR Y LLQPLP+PE +W Sbjct: 530 GHSGIPVTYRRAKALFAWPSMKKMILSLLKQCQVCLQSKPDRAKYPGLLQPLPVPEGAWQ 589 Query: 264 HISMDFFEGLPK*RERDVILVSS**TY*LWSFCGCNSVIFLHRR*QKFSWKIFTGCVGYH 443 +S+DF EGLPK + ILV F Q+F ++ Sbjct: 590 VVSLDFIEGLPKSHGFNCILVVVDKFSKYAHFIPLYHPFTTASVAQEFMTHVYKLHGLPR 649 Query: 444 SIVSDK-KIFTSRFWKELFKQLGTKIDMSTACHP*TDGLIERLNYTLETYLRYFCSHGPH 620 +I+SD+ +IFTS+ W+ LF + GTK+ S+A HP TDG ER+N LETYLR F P Sbjct: 650 TIISDRDRIFTSQLWEFLFTKSGTKLHKSSAYHPQTDGQTERVNQCLETYLRCFVHAVPS 709 Query: 621 KWAELLFMAEWWYNTTYHATIQMTLFESL 707 KW L++AE+WYN +YH+ I+ T F L Sbjct: 710 KWFYWLYLAEFWYNCSYHSAIRATPFSVL 738 Score = 23.9 bits (50), Expect(2) = 3e-31 Identities = 10/25 (40%), Positives = 17/25 (68%) Frame = +1 Query: 13 GRIYIDASNNVRQKIINEIHASQQG 87 GRI+I + ++ II+E+H+S G Sbjct: 505 GRIWIGNNTQLQHIIIDELHSSFMG 529 >gb|ABA95357.2| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 2811 Score = 142 bits (357), Expect = 3e-31 Identities = 82/209 (39%), Positives = 119/209 (56%), Gaps = 2/209 (0%) Frame = +3 Query: 87 GYSRVQASYHRAK-LYFWPGMKEHIKEVISCCDTHERNNDDRV*YIVLLQPLPIPEKSWI 263 G+S + +Y R K L+ WPGM++ ++E + CD +R + V Y LLQPL +P +SW Sbjct: 2356 GHSGILVTYQRVKQLFSWPGMRKDVQEFVQHCDICQRAKSEHVKYPGLLQPLEVPSQSWQ 2415 Query: 264 HISMDFFEGLPK*RERDVILVSS**TY*LWSFCGCNSVIFLHRR*QKFSWKIFTGCVGYH 443 I+MDF EGLPK D ILV F Q F I + Sbjct: 2416 VITMDFIEGLPKSASFDCILVIVDKFSKFAHFLPLKHPFTAFGVAQLFMEHIHSIHGLPQ 2475 Query: 444 SIVSDK-KIFTSRFWKELFKQLGTKIDMSTACHP*TDGLIERLNYTLETYLRYFCSHGPH 620 +IVSD+ ++FTS WKELF++ GT++ MS++ HP +DG ER+N +E +LR F P Sbjct: 2476 AIVSDRDRVFTSSLWKELFRRAGTQLRMSSSYHPQSDGQTERVNQCVEMFLRCFVHSCPS 2535 Query: 621 KWAELLFMAEWWYNTTYHATIQMTLFESL 707 +W L +A++WYNT++H+ + MT FE L Sbjct: 2536 RWKHWLALAQYWYNTSFHSALGMTPFEVL 2564