BLASTX nr result
ID: Catharanthus22_contig00012914
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus22_contig00012914 (377 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004231079.1| PREDICTED: pre-rRNA-processing protein ESF2-... 57 3e-06 ref|XP_006366296.1| PREDICTED: pre-rRNA-processing protein ESF2-... 56 4e-06 ref|XP_006364111.1| PREDICTED: pre-rRNA-processing protein ESF2-... 56 4e-06 ref|XP_004248182.1| PREDICTED: pre-rRNA-processing protein ESF2-... 56 4e-06 >ref|XP_004231079.1| PREDICTED: pre-rRNA-processing protein ESF2-like [Solanum lycopersicum] Length = 196 Score = 56.6 bits (135), Expect = 3e-06 Identities = 26/42 (61%), Positives = 31/42 (73%) Frame = -3 Query: 369 SDVPEPQFVPKTIRQYPQKKPVGAKEGEGKLGLSKDLLAGIF 244 SD P QF PK IRQ+PQKKPV + G+ K LSKD+LAG+F Sbjct: 130 SDFPSDQFAPKVIRQFPQKKPVADQTGKIKPSLSKDILAGVF 171 >ref|XP_006366296.1| PREDICTED: pre-rRNA-processing protein ESF2-like isoform X1 [Solanum tuberosum] gi|565401624|ref|XP_006366297.1| PREDICTED: pre-rRNA-processing protein ESF2-like isoform X2 [Solanum tuberosum] Length = 247 Score = 56.2 bits (134), Expect = 4e-06 Identities = 26/42 (61%), Positives = 31/42 (73%) Frame = -3 Query: 369 SDVPEPQFVPKTIRQYPQKKPVGAKEGEGKLGLSKDLLAGIF 244 SD P QF PK IRQ+PQKKPV + G+ K LSKD+LAG+F Sbjct: 203 SDFPSDQFAPKVIRQFPQKKPVADQAGKLKPSLSKDVLAGVF 244 >ref|XP_006364111.1| PREDICTED: pre-rRNA-processing protein ESF2-like, partial [Solanum tuberosum] Length = 279 Score = 56.2 bits (134), Expect = 4e-06 Identities = 26/42 (61%), Positives = 31/42 (73%) Frame = -3 Query: 369 SDVPEPQFVPKTIRQYPQKKPVGAKEGEGKLGLSKDLLAGIF 244 SD P QF PK IRQ+PQKKPV + G+ K LSKD+LAG+F Sbjct: 235 SDFPSDQFAPKVIRQFPQKKPVADQAGKLKPSLSKDVLAGVF 276 >ref|XP_004248182.1| PREDICTED: pre-rRNA-processing protein ESF2-like [Solanum lycopersicum] Length = 247 Score = 56.2 bits (134), Expect = 4e-06 Identities = 26/42 (61%), Positives = 31/42 (73%) Frame = -3 Query: 369 SDVPEPQFVPKTIRQYPQKKPVGAKEGEGKLGLSKDLLAGIF 244 SD P QF PK IRQ+PQKKPV + G+ K LSKD+LAG+F Sbjct: 203 SDFPSDQFAPKVIRQFPQKKPVADQAGKLKPSLSKDVLAGVF 244