BLASTX nr result

ID: Catharanthus22_contig00012914 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00012914
         (377 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004231079.1| PREDICTED: pre-rRNA-processing protein ESF2-...    57   3e-06
ref|XP_006366296.1| PREDICTED: pre-rRNA-processing protein ESF2-...    56   4e-06
ref|XP_006364111.1| PREDICTED: pre-rRNA-processing protein ESF2-...    56   4e-06
ref|XP_004248182.1| PREDICTED: pre-rRNA-processing protein ESF2-...    56   4e-06

>ref|XP_004231079.1| PREDICTED: pre-rRNA-processing protein ESF2-like [Solanum
           lycopersicum]
          Length = 196

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/42 (61%), Positives = 31/42 (73%)
 Frame = -3

Query: 369 SDVPEPQFVPKTIRQYPQKKPVGAKEGEGKLGLSKDLLAGIF 244
           SD P  QF PK IRQ+PQKKPV  + G+ K  LSKD+LAG+F
Sbjct: 130 SDFPSDQFAPKVIRQFPQKKPVADQTGKIKPSLSKDILAGVF 171


>ref|XP_006366296.1| PREDICTED: pre-rRNA-processing protein ESF2-like isoform X1
           [Solanum tuberosum] gi|565401624|ref|XP_006366297.1|
           PREDICTED: pre-rRNA-processing protein ESF2-like isoform
           X2 [Solanum tuberosum]
          Length = 247

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/42 (61%), Positives = 31/42 (73%)
 Frame = -3

Query: 369 SDVPEPQFVPKTIRQYPQKKPVGAKEGEGKLGLSKDLLAGIF 244
           SD P  QF PK IRQ+PQKKPV  + G+ K  LSKD+LAG+F
Sbjct: 203 SDFPSDQFAPKVIRQFPQKKPVADQAGKLKPSLSKDVLAGVF 244


>ref|XP_006364111.1| PREDICTED: pre-rRNA-processing protein ESF2-like, partial [Solanum
           tuberosum]
          Length = 279

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/42 (61%), Positives = 31/42 (73%)
 Frame = -3

Query: 369 SDVPEPQFVPKTIRQYPQKKPVGAKEGEGKLGLSKDLLAGIF 244
           SD P  QF PK IRQ+PQKKPV  + G+ K  LSKD+LAG+F
Sbjct: 235 SDFPSDQFAPKVIRQFPQKKPVADQAGKLKPSLSKDVLAGVF 276


>ref|XP_004248182.1| PREDICTED: pre-rRNA-processing protein ESF2-like [Solanum
           lycopersicum]
          Length = 247

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/42 (61%), Positives = 31/42 (73%)
 Frame = -3

Query: 369 SDVPEPQFVPKTIRQYPQKKPVGAKEGEGKLGLSKDLLAGIF 244
           SD P  QF PK IRQ+PQKKPV  + G+ K  LSKD+LAG+F
Sbjct: 203 SDFPSDQFAPKVIRQFPQKKPVADQAGKLKPSLSKDVLAGVF 244


Top