BLASTX nr result
ID: Catharanthus22_contig00012913
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00012913
(663 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga... 155 8e-36
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 152 9e-35
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 152 9e-35
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 152 1e-34
ref|XP_006490008.1| PREDICTED: uncharacterized protein LOC102624... 146 5e-33
ref|XP_006480844.1| PREDICTED: putative ribonuclease H protein A... 145 1e-32
ref|XP_004301578.1| PREDICTED: uncharacterized protein LOC101313... 143 4e-32
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta... 142 9e-32
gb|EMJ13914.1| hypothetical protein PRUPE_ppa018769mg, partial [... 142 1e-31
gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas... 141 2e-31
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ... 141 2e-31
ref|XP_004305437.1| PREDICTED: uncharacterized protein LOC101296... 138 1e-30
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ... 132 7e-29
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript... 129 1e-27
emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|73210... 127 2e-27
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas... 125 1e-26
gb|EOY30506.1| Uncharacterized protein TCM_037692 [Theobroma cacao] 122 1e-25
ref|XP_004301440.1| PREDICTED: putative ribonuclease H protein A... 122 1e-25
gb|EMJ21003.1| hypothetical protein PRUPE_ppa026469mg, partial [... 121 2e-25
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga... 120 5e-25
>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1378
Score = 155 bits (393), Expect = 8e-36
Identities = 85/214 (39%), Positives = 125/214 (58%), Gaps = 9/214 (4%)
Frame = +3
Query: 42 SSTPLSIIWNGGRSENIQPSKGAERSSS---------MEVLGHMISKSIENGKWKGVKAA 194
SS L I+WNG E I P++G + ME L H+I + + NG WK VKA+
Sbjct: 617 SSANLQILWNGEPMEKICPTRGLRQGDPLSPYLYVICMERLAHLIDQEVTNGNWKPVKAS 676
Query: 195 RRGPILSHIFFADDLILFGEATNTQAKCTEDVLSKF*RMSGQRVNSEKSKLFILANILVR 374
R GP +S++ FADDLILF EA+ QA+ + L +F SG +VN +KSK++ AN +
Sbjct: 677 RNGPPISNLAFADDLILFSEASVEQAQVMKWCLDRFCEASGSKVNEDKSKIYFSANTHLD 736
Query: 375 TARVLSANFGIPLTGDLGKYLGVPLMHNRMNGRMFGYVVEKMRKKLSGWKTKFLSKSTRS 554
+ + T D GKYLGVP ++ R + R + Y+V+++ KL+GWKTK LS + R+
Sbjct: 737 IRDAVCNTLAMEATADFGKYLGVPTINGRSSKREYQYLVDRINGKLAGWKTKTLSIAGRA 796
Query: 555 ILIETTIVAIPAYSMQIVKLLVSVIEQVKQIYRS 656
LI++ +IP Y+MQ KL S + + + RS
Sbjct: 797 TLIQSAFSSIPYYTMQSTKLPRSTCDDIDRKSRS 830
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 152 bits (384), Expect = 9e-35
Identities = 85/232 (36%), Positives = 127/232 (54%), Gaps = 15/232 (6%)
Frame = +3
Query: 6 LEDF-----LIKLIMF*-SSTPLSIIWNGGRSENIQPSKGAERSSS---------MEVLG 140
LEDF LI LI+F + L+I+WNGGR +P +G + ME L
Sbjct: 597 LEDFGFPRRLIDLILFSLQESSLAILWNGGRLPPFKPGRGLRQGDPLAPYLFNLVMERLA 656
Query: 141 HMISKSIENGKWKGVKAARRGPILSHIFFADDLILFGEATNTQAKCTEDVLSKF*RMSGQ 320
H I + WK V R G +SH+FFADDL+LFGEA+ QA+ D L F SG
Sbjct: 657 HDIQTRVNARTWKPVHITRGGTGISHLFFADDLMLFGEASEHQAQIMFDCLDSFSNASGL 716
Query: 321 RVNSEKSKLFILANILVRTARVLSANFGIPLTGDLGKYLGVPLMHNRMNGRMFGYVVEKM 500
+VN KS LF +N+ R + + +P+ LG YLG+P++ R++ F V++KM
Sbjct: 717 KVNFSKSLLFCSSNVNAGLKRAIGSILQVPVAESLGTYLGIPMLKERVSRNTFNAVIDKM 776
Query: 501 RKKLSGWKTKFLSKSTRSILIETTIVAIPAYSMQIVKLLVSVIEQVKQIYRS 656
R KLS WK L+ + R +L++ ++ +P Y+MQ++ L VS ++ + R+
Sbjct: 777 RTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRN 828
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 152 bits (384), Expect = 9e-35
Identities = 85/232 (36%), Positives = 127/232 (54%), Gaps = 15/232 (6%)
Frame = +3
Query: 6 LEDF-----LIKLIMF*-SSTPLSIIWNGGRSENIQPSKGAERSSS---------MEVLG 140
LEDF LI LI+F + L+I+WNGGR +P +G + ME L
Sbjct: 597 LEDFGFPRRLIDLILFSLQESSLAILWNGGRLPPFKPGRGLRQGDPLAPYLFNLVMERLA 656
Query: 141 HMISKSIENGKWKGVKAARRGPILSHIFFADDLILFGEATNTQAKCTEDVLSKF*RMSGQ 320
H I + WK V R G +SH+FFADDL+LFGEA+ QA+ D L F SG
Sbjct: 657 HDIQTRVNARTWKPVHITRGGTGISHLFFADDLMLFGEASEHQAQIMFDCLDSFSNASGL 716
Query: 321 RVNSEKSKLFILANILVRTARVLSANFGIPLTGDLGKYLGVPLMHNRMNGRMFGYVVEKM 500
+VN KS LF +N+ R + + +P+ LG YLG+P++ R++ F V++KM
Sbjct: 717 KVNFSKSLLFCSSNVNAGLKRAIGSILQVPVAESLGTYLGIPMLKERVSRNTFNAVIDKM 776
Query: 501 RKKLSGWKTKFLSKSTRSILIETTIVAIPAYSMQIVKLLVSVIEQVKQIYRS 656
R KLS WK L+ + R +L++ ++ +P Y+MQ++ L VS ++ + R+
Sbjct: 777 RTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRN 828
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 152 bits (383), Expect = 1e-34
Identities = 85/232 (36%), Positives = 127/232 (54%), Gaps = 15/232 (6%)
Frame = +3
Query: 6 LEDF-----LIKLIMF*-SSTPLSIIWNGGRSENIQPSKGAERSSS---------MEVLG 140
LEDF LI LI+F + L+I+WNGGR +P +G + ME L
Sbjct: 1129 LEDFGFPRRLIDLILFSLQESSLAILWNGGRPPPFKPGRGLRQGDPLVPYLFNLVMERLA 1188
Query: 141 HMISKSIENGKWKGVKAARRGPILSHIFFADDLILFGEATNTQAKCTEDVLSKF*RMSGQ 320
H I + WK V R G +SH+FFADDL+LFGEA+ QA+ D L F SG
Sbjct: 1189 HDIQTRVNARTWKPVHITRGGTGISHLFFADDLMLFGEASEHQAQIMFDCLDSFSDASGL 1248
Query: 321 RVNSEKSKLFILANILVRTARVLSANFGIPLTGDLGKYLGVPLMHNRMNGRMFGYVVEKM 500
+VN KS LF +N+ R + + +P+ LG YLG+P++ R++ F V++KM
Sbjct: 1249 KVNFSKSLLFCSSNVNAGLKRAIGSILQVPVAESLGTYLGIPMLKERVSRNTFNAVIDKM 1308
Query: 501 RKKLSGWKTKFLSKSTRSILIETTIVAIPAYSMQIVKLLVSVIEQVKQIYRS 656
R KLS WK L+ + R +L++ ++ +P Y+MQ++ L VS ++ + R+
Sbjct: 1309 RTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRN 1360
>ref|XP_006490008.1| PREDICTED: uncharacterized protein LOC102624085 [Citrus sinensis]
Length = 1635
Score = 146 bits (369), Expect = 5e-33
Identities = 81/226 (35%), Positives = 129/226 (57%), Gaps = 10/226 (4%)
Frame = +3
Query: 6 LEDFLIKLIMF*SSTP-LSIIWNGGRSENIQPSKGAERSSSM---------EVLGHMISK 155
L LI LIM +T ++++WNG S P +G + + E L H IS+
Sbjct: 1094 LPTMLINLIMECITTATMNVLWNGELSSEFCPGRGVRQGDPLSPYIFVLCIERLSHGISR 1153
Query: 156 SIENGKWKGVKAARRGPILSHIFFADDLILFGEATNTQAKCTEDVLSKF*RMSGQRVNSE 335
SI+ G WK ++ AR G LSH+FFADDL+ EA++ QA ++ +F SG +VN
Sbjct: 1154 SIQQGHWKPIRLARMGTPLSHLFFADDLLFLSEASSQQAIIINKIIDEFSASSGAKVNKS 1213
Query: 336 KSKLFILANILVRTARVLSANFGIPLTGDLGKYLGVPLMHNRMNGRMFGYVVEKMRKKLS 515
K+ ++ ANI A + ++ G +T +LGKYLGVPL H+R++ + + +V+K+ ++LS
Sbjct: 1214 KTLVYFSANISAMEASRIGSDLGYSVTDNLGKYLGVPLCHSRISKQTYQSIVDKIDQRLS 1273
Query: 516 GWKTKFLSKSTRSILIETTIVAIPAYSMQIVKLLVSVIEQVKQIYR 653
GW L+ + R L ++ + AI Y+MQ KL S+ ++ Q+ R
Sbjct: 1274 GWNASHLTLAGRITLAQSVLQAISVYAMQTTKLPRSIKMKIDQLCR 1319
>ref|XP_006480844.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 768
Score = 145 bits (366), Expect = 1e-32
Identities = 81/222 (36%), Positives = 129/222 (58%), Gaps = 10/222 (4%)
Frame = +3
Query: 18 LIKLIM-F*SSTPLSIIWNGGRSENIQPSKGAERSSSM---------EVLGHMISKSIEN 167
LI+LIM +ST ++I+W+G +++ PS+G + + E L H I +SI
Sbjct: 32 LIQLIMECITSTSMNILWHGELTDDFSPSRGVRQGDPLSPYIFVLCVERLSHGIYQSIHQ 91
Query: 168 GKWKGVKAARRGPILSHIFFADDLILFGEATNTQAKCTEDVLSKF*RMSGQRVNSEKSKL 347
WK ++ +R G LSH+FF DDL+LF EAT+ QA+C VL F SG +VN K+ +
Sbjct: 92 DHWKPIRLSRLGTPLSHLFFTDDLLLFAEATSGQAQCINSVLGDFCLSSGTKVNQSKTHV 151
Query: 348 FILANILVRTARVLSANFGIPLTGDLGKYLGVPLMHNRMNGRMFGYVVEKMRKKLSGWKT 527
+ N+ A + + G +T DLGKYLG+PL+H+R++ + + +++K +KL GW
Sbjct: 152 YFSKNVPDAVATRIWRDLGYTVTKDLGKYLGMPLLHSRVSQQTYQGILDKTDQKLLGWAA 211
Query: 528 KFLSKSTRSILIETTIVAIPAYSMQIVKLLVSVIEQVKQIYR 653
LS + R L ++ + A+P Y+MQ L S+ ++ QI R
Sbjct: 212 SQLSLAGRITLTQSVLQAVPIYAMQTTNLPGSIKTKLDQICR 253
>ref|XP_004301578.1| PREDICTED: uncharacterized protein LOC101313223 [Fragaria vesca
subsp. vesca]
Length = 543
Score = 143 bits (361), Expect = 4e-32
Identities = 73/176 (41%), Positives = 111/176 (63%)
Frame = +3
Query: 129 EVLGHMISKSIENGKWKGVKAARRGPILSHIFFADDLILFGEATNTQAKCTEDVLSKF*R 308
++L +I ++E G WK V A++ GP +SH+FF DDL+LF EAT QA + L F
Sbjct: 224 KMLSDLIHSAVEYGHWKSVNASQSGPRISHLFFVDDLMLFAEATEHQAYGLKTCLDNFCA 283
Query: 309 MSGQRVNSEKSKLFILANILVRTARVLSANFGIPLTGDLGKYLGVPLMHNRMNGRMFGYV 488
+SGQ ++ EKS +F N A +SA G PLT DLGKYLG+PL+H+R+N + +
Sbjct: 284 ISGQIISYEKSLIFCSPNTTKTMASSISATCGSPLTSDLGKYLGMPLIHSRVNKHTYDAI 343
Query: 489 VEKMRKKLSGWKTKFLSKSTRSILIETTIVAIPAYSMQIVKLLVSVIEQVKQIYRS 656
K++ +LS WK+K L+ + R LI++ AIP Y+MQ K VS+ +++ ++ R+
Sbjct: 344 FYKVQSRLSSWKSKVLNMAGRLTLIQSVTSAIPNYAMQTTKFPVSLCDRLDKLNRN 399
>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 142 bits (358), Expect = 9e-32
Identities = 75/210 (35%), Positives = 122/210 (58%), Gaps = 9/210 (4%)
Frame = +3
Query: 54 LSIIWNGGRSENIQPSKGAERSSSM---------EVLGHMISKSIENGKWKGVKAARRGP 206
+S++WNG R+++ P++G + + E L H+I S+ +WK + + G
Sbjct: 478 MSVLWNGERTDSFVPARGLRQGDPLSPYLFVLCLERLCHLIEASVGKREWKPIAVSCGGS 537
Query: 207 ILSHIFFADDLILFGEATNTQAKCTEDVLSKF*RMSGQRVNSEKSKLFILANILVRTARV 386
LSH+ FADDLILF EA+ Q + VL +F SGQ+V+ EKSK+F N+ ++
Sbjct: 538 KLSHVCFADDLILFAEASVAQIRIIRRVLERFCEASGQKVSLEKSKIFFSHNVSREMEQL 597
Query: 387 LSANFGIPLTGDLGKYLGVPLMHNRMNGRMFGYVVEKMRKKLSGWKTKFLSKSTRSILIE 566
+S GI T +LGKYLG+P++ RMN FG V+E++ +L+GWK + LS + R L +
Sbjct: 598 ISEESGIGCTKELGKYLGMPILQKRMNKETFGEVLERVSARLAGWKGRSLSLAGRITLTK 657
Query: 567 TTIVAIPAYSMQIVKLLVSVIEQVKQIYRS 656
+ +IP + M + L VS ++ + + R+
Sbjct: 658 AVLSSIPVHVMSAILLPVSTLDTLDRYSRT 687
>gb|EMJ13914.1| hypothetical protein PRUPE_ppa018769mg, partial [Prunus persica]
Length = 387
Score = 142 bits (357), Expect = 1e-31
Identities = 76/179 (42%), Positives = 112/179 (62%)
Frame = +3
Query: 126 MEVLGHMISKSIENGKWKGVKAARRGPILSHIFFADDLILFGEATNTQAKCTEDVLSKF* 305
+E L H+I + +WK VK++ GP +SH+FFADDL+LF EA+ QA+ D L KF
Sbjct: 23 IEKLSHIIFDEVGKKRWKCVKSSHSGPCVSHLFFADDLVLFAEASTKQAQIMRDCLEKFC 82
Query: 306 RMSGQRVNSEKSKLFILANILVRTARVLSANFGIPLTGDLGKYLGVPLMHNRMNGRMFGY 485
+SGQ VN +KS +F N A+ LS G PLT +LG YLG+P++HN++ +G
Sbjct: 83 SVSGQAVNFDKSAIFCSPNTGNVLAQDLSRICGSPLTANLGNYLGMPILHNKVCKDTYGG 142
Query: 486 VVEKMRKKLSGWKTKFLSKSTRSILIETTIVAIPAYSMQIVKLLVSVIEQVKQIYRSIF 662
+V K++ L+ WK+K LS + R+ LI++ +IP Y+MQ KL VSV + +I + F
Sbjct: 143 LVNKVQNCLTLWKSKHLSLAGRATLIQSVTSSIPVYTMQTAKLPVSVCNALDRINCNFF 201
>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
Polynucleotidyl transferase, Ribonuclease H fold
[Medicago truncatula]
Length = 729
Score = 141 bits (356), Expect = 2e-31
Identities = 79/222 (35%), Positives = 123/222 (55%), Gaps = 10/222 (4%)
Frame = +3
Query: 18 LIKLIMF*SSTP-LSIIWNGGRSENIQPSKGAERSSS---------MEVLGHMISKSIEN 167
LI +I STP I+WNG +SE+ PS+G + ME L H+I+ +E
Sbjct: 32 LINIIHHCISTPSYKIMWNGDKSESFYPSRGIRQGDPLSPYLFVICMERLSHIIADQVEA 91
Query: 168 GKWKGVKAARRGPILSHIFFADDLILFGEATNTQAKCTEDVLSKF*RMSGQRVNSEKSKL 347
WK ++A R GP +SH+ FADDL+LF EA+ QA C L F + SGQ++N EK+++
Sbjct: 92 DYWKPMRAGRYGPPISHLLFADDLLLFAEASIEQAHCVLHCLDMFCQSSGQKINREKTQV 151
Query: 348 FILANILVRTARVLSANFGIPLTGDLGKYLGVPLMHNRMNGRMFGYVVEKMRKKLSGWKT 527
+ N+ + + G LGKYLG + R + F +++ K++ KLSGWK
Sbjct: 152 YFSKNVDNHLREDIIQHTGFNQVNSLGKYLGANITPGRTSRGHFNHIINKIQNKLSGWKQ 211
Query: 528 KFLSKSTRSILIETTIVAIPAYSMQIVKLLVSVIEQVKQIYR 653
+ LS + R L + I +IP Y MQ K+ ++ +++++I R
Sbjct: 212 QCLSLAGRITLSKFVISSIPYYHMQYAKIPKTICDEIEKIQR 253
>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
Length = 799
Score = 141 bits (355), Expect = 2e-31
Identities = 74/210 (35%), Positives = 123/210 (58%), Gaps = 9/210 (4%)
Frame = +3
Query: 54 LSIIWNGGRSENIQPSKGAERSSSM---------EVLGHMISKSIENGKWKGVKAARRGP 206
++++WNG ++E+ PS+G + + E L H I ++ +WK + +R GP
Sbjct: 70 MTVLWNGEKTESFIPSRGLRQGDPLSPYLFVLCLERLCHQIDLAVGTKEWKPISMSRGGP 129
Query: 207 ILSHIFFADDLILFGEATNTQAKCTEDVLSKF*RMSGQRVNSEKSKLFILANILVRTARV 386
+LSHI FADDLILF EA+ Q + VL KF SGQ+V+ EKSK+F N+ +
Sbjct: 130 LLSHICFADDLILFAEASVAQIRVVRKVLEKFCIASGQKVSLEKSKIFFSQNVHRDLEKF 189
Query: 387 LSANFGIPLTGDLGKYLGVPLMHNRMNGRMFGYVVEKMRKKLSGWKTKFLSKSTRSILIE 566
+S GI T +LGKYLG+P++ R+N FG ++ ++ +L+GWK + LS + R L +
Sbjct: 190 ISDESGIKSTKELGKYLGMPVLQKRINKDTFGEILLRVSSRLAGWKGRMLSLAGRLTLTK 249
Query: 567 TTIVAIPAYSMQIVKLLVSVIEQVKQIYRS 656
+ + +IP ++M + L + ++ +I +S
Sbjct: 250 SVLSSIPIHTMSTIALPKATLDGFDRISKS 279
>ref|XP_004305437.1| PREDICTED: uncharacterized protein LOC101296313 [Fragaria vesca
subsp. vesca]
Length = 449
Score = 138 bits (348), Expect = 1e-30
Identities = 73/176 (41%), Positives = 112/176 (63%)
Frame = +3
Query: 126 MEVLGHMISKSIENGKWKGVKAARRGPILSHIFFADDLILFGEATNTQAKCTEDVLSKF* 305
+E L H+I +I+ G WK VKA++ GP + H+FFADDLILF EA++ Q + L F
Sbjct: 217 VEKLSHLIQSAIDYGYWKAVKASQSGPKILHLFFADDLILFVEASSQQTSLLKTCLDNFC 276
Query: 306 RMSGQRVNSEKSKLFILANILVRTARVLSANFGIPLTGDLGKYLGVPLMHNRMNGRMFGY 485
+S Q V+ EKS +F N TA ++S G PLT DLGKYLG+PL+++R+N +
Sbjct: 277 ALSRQTVSFEKSLVFCSPNTSKSTASLISNVCGSPLTCDLGKYLGMPLIYDRVNKCTYAG 336
Query: 486 VVEKMRKKLSGWKTKFLSKSTRSILIETTIVAIPAYSMQIVKLLVSVIEQVKQIYR 653
+ +K++K+L WK+K LS R L+++ AIP Y+MQ K V++ +++ ++ R
Sbjct: 337 LFDKVQKRLFSWKSKVLSFVGRLTLVQSVTSAIPMYAMQTAKFHVNLCDKLDKLNR 392
>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
gi|7268307|emb|CAB78601.1| reverse transcriptase like
protein [Arabidopsis thaliana]
Length = 929
Score = 132 bits (333), Expect = 7e-29
Identities = 76/228 (33%), Positives = 128/228 (56%), Gaps = 10/228 (4%)
Frame = +3
Query: 3 GLEDFLIKLIMF*SSTP-LSIIWNGGRSENIQPSKGAERSSSM---------EVLGHMIS 152
GL + IK IM + P +S++WNG ++++ P +G + + E L H I
Sbjct: 412 GLSEGWIKRIMECVAGPEMSLLWNGEKTDSFTPERGLRQGDPISPYLFVLCIERLCHQIE 471
Query: 153 KSIENGKWKGVKAARRGPILSHIFFADDLILFGEATNTQAKCTEDVLSKF*RMSGQRVNS 332
++ G WK + ++ GP +SH+ FADDLILF EA+ Q+V+
Sbjct: 472 TAVGRGDWKSISISQGGPKVSHVCFADDLILFAEAS-----------------VAQKVSL 514
Query: 333 EKSKLFILANILVRTARVLSANFGIPLTGDLGKYLGVPLMHNRMNGRMFGYVVEKMRKKL 512
EKSK+F N+ +++A GI T +LGKYLG+P++ R+N FG V+E++ +L
Sbjct: 515 EKSKIFFSNNVSRDLEGLITAETGIGSTRELGKYLGMPVLQKRINKDTFGEVLERVSSRL 574
Query: 513 SGWKTKFLSKSTRSILIETTIVAIPAYSMQIVKLLVSVIEQVKQIYRS 656
SGWK++ LS + R L + +++IP ++M + L S++EQ+ ++ R+
Sbjct: 575 SGWKSRSLSLAGRITLTKAVLMSIPIHTMSSILLPASLLEQLDKVSRN 622
>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 732
Score = 129 bits (323), Expect = 1e-27
Identities = 67/167 (40%), Positives = 103/167 (61%)
Frame = +3
Query: 156 SIENGKWKGVKAARRGPILSHIFFADDLILFGEATNTQAKCTEDVLSKF*RMSGQRVNSE 335
SI WK + ++ GP LSHI FADDLILF EA+ Q + VL +F SGQ+V+ E
Sbjct: 183 SIARKDWKPISLSQGGPKLSHICFADDLILFAEASVAQIRVIRRVLERFCVASGQKVSLE 242
Query: 336 KSKLFILANILVRTARVLSANFGIPLTGDLGKYLGVPLMHNRMNGRMFGYVVEKMRKKLS 515
KSK+F N+ +++S GI T +LGKYLG+P++ R+N FG ++EK+ +L+
Sbjct: 243 KSKIFFSENVSRDLGKLISDESGISSTRELGKYLGMPVLQRRINKDTFGDILEKLTTRLA 302
Query: 516 GWKTKFLSKSTRSILIETTIVAIPAYSMQIVKLLVSVIEQVKQIYRS 656
GWK +FLS + R L + + +IP ++M + L S ++ + ++ RS
Sbjct: 303 GWKGRFLSLAGRVTLTKAVLSSIPVHTMSTIALPKSTLDGLDKVSRS 349
>emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|7321072|emb|CAB82119.1|
putative protein [Arabidopsis thaliana]
Length = 947
Score = 127 bits (320), Expect = 2e-27
Identities = 66/175 (37%), Positives = 108/175 (61%)
Frame = +3
Query: 129 EVLGHMISKSIENGKWKGVKAARRGPILSHIFFADDLILFGEATNTQAKCTEDVLSKF*R 308
E L HMI +++ +WK + ++ GP +SHI FADDLILF EA+ +Q + +L F
Sbjct: 326 ERLCHMIDRAVAVKEWKSIGLSQGGPKISHICFADDLILFAEASVSQIRVIRRILETFCI 385
Query: 309 MSGQRVNSEKSKLFILANILVRTARVLSANFGIPLTGDLGKYLGVPLMHNRMNGRMFGYV 488
SGQ+V+ +KSK+F N+ +++S GI T +LGKYLG+P++ R+N FG V
Sbjct: 386 ASGQKVSLDKSKIFFSKNVSRDLEKLISKESGIKSTRELGKYLGMPILQRRINKDTFGEV 445
Query: 489 VEKMRKKLSGWKTKFLSKSTRSILIETTIVAIPAYSMQIVKLLVSVIEQVKQIYR 653
+E++ +L+GWK + LS + R L ++ + IP ++M + L S +E + ++ R
Sbjct: 446 LERVSSRLAGWKGRSLSFAGRLTLTKSVLSLIPIHTMSTISLPQSTLEGLDKLAR 500
>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
[Medicago truncatula]
Length = 1296
Score = 125 bits (314), Expect = 1e-26
Identities = 71/228 (31%), Positives = 119/228 (52%), Gaps = 10/228 (4%)
Frame = +3
Query: 3 GLEDFLIKLIMF*-SSTPLSIIWNGGRSENIQPSKGAERSSS---------MEVLGHMIS 152
G D ++KLIM SS S++WNG + +P+ G + ME L I
Sbjct: 599 GFPDIIVKLIMHCVSSANYSLLWNGNKMPPFKPTHGLRQGDPLSPYLFILCMEKLSVAIQ 658
Query: 153 KSIENGKWKGVKAARRGPILSHIFFADDLILFGEATNTQAKCTEDVLSKF*RMSGQRVNS 332
++ G W+ + GP +SH+ FADD++LF +A ++Q + ++ +F R SG ++N
Sbjct: 659 DAVLQGSWEPIHIINDGPQISHLLFADDVLLFTKAKSSQLQFITNLFDRFSRASGLKINI 718
Query: 333 EKSKLFILANILVRTARVLSANFGIPLTGDLGKYLGVPLMHNRMNGRMFGYVVEKMRKKL 512
KS+ + + L+A GI T LGKYLG P++ R F +++EKM+ +L
Sbjct: 719 SKSRAYYSSGTPNGKINNLTAISGIQSTTTLGKYLGFPMLQGRPKRSDFNFILEKMQTRL 778
Query: 513 SGWKTKFLSKSTRSILIETTIVAIPAYSMQIVKLLVSVIEQVKQIYRS 656
+ WK + L+++ R L + + IP Y MQI L ++ + + Q R+
Sbjct: 779 ASWKNRLLNRTGRLTLATSVLSTIPTYYMQINWLPQNICDSIDQTARN 826
>gb|EOY30506.1| Uncharacterized protein TCM_037692 [Theobroma cacao]
Length = 475
Score = 122 bits (306), Expect = 1e-25
Identities = 70/207 (33%), Positives = 112/207 (54%), Gaps = 8/207 (3%)
Frame = +3
Query: 60 IIWNGGRSENI---QPSKGAERSS-----SMEVLGHMISKSIENGKWKGVKAARRGPILS 215
+IWNG S N + +G S M+ L H I++++ G WK ++ R GP L
Sbjct: 138 VIWNGSFSNNFFLTRVKRGDPLSFFFFFLCMQCLSHGINEAVTQGLWKPIRFGRGGPALP 197
Query: 216 HIFFADDLILFGEATNTQAKCTEDVLSKF*RMSGQRVNSEKSKLFILANILVRTARVLSA 395
H+FF DDLILF EA + + V + F + S ++VN EK+ + N+ + +S
Sbjct: 198 HLFFVDDLILFAEALVPRMDVIKGVSNHFRKYSDEKVNVEKTSFYFSKNVGMDIIHAISE 257
Query: 396 NFGIPLTGDLGKYLGVPLMHNRMNGRMFGYVVEKMRKKLSGWKTKFLSKSTRSILIETTI 575
G + +LGKYLGVPL+ R +F Y+ EK+ +LS WK LS + R L+++ +
Sbjct: 258 CSGFSHSTNLGKYLGVPLLRGRKKYSLFKYLEEKICNRLSSWKASALSFAGRLTLVKSIL 317
Query: 576 VAIPAYSMQIVKLLVSVIEQVKQIYRS 656
+ IP+Y+MQ V + E+++ R+
Sbjct: 318 LYIPSYAMQTVAIPEKTREKIEMHCRN 344
>ref|XP_004301440.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 786
Score = 122 bits (306), Expect = 1e-25
Identities = 68/208 (32%), Positives = 110/208 (52%), Gaps = 9/208 (4%)
Frame = +3
Query: 42 SSTPLSIIWNGGRSENIQPSKGAERSSSM---------EVLGHMISKSIENGKWKGVKAA 194
SS SI+ NG ++ P +G + + EVL +++++++ G+K
Sbjct: 50 SSVSFSIVLNGCPGKSFFPGRGLRQGDPLSPYLFLIISEVLSVRLTRAVQDKSLLGIKLC 109
Query: 195 RRGPILSHIFFADDLILFGEATNTQAKCTEDVLSKF*RMSGQRVNSEKSKLFILANILVR 374
RRGP LSH+FFADD + F +AT ++ ++ + SGQ +N EKS + N +
Sbjct: 110 RRGPTLSHMFFADDALFFLKATLGNVCRLMEIFKEYCKASGQLINGEKSSAYFSPNTPDQ 169
Query: 375 TARVLSANFGIPLTGDLGKYLGVPLMHNRMNGRMFGYVVEKMRKKLSGWKTKFLSKSTRS 554
+R+L G D GKYLG+P + R GY+V+++++KL GWK + LS + +
Sbjct: 170 MSRLLGELMGFAEVEDPGKYLGLPTLWGRSKKEAVGYIVDRVQRKLVGWKQRSLSWAGKE 229
Query: 555 ILIETTIVAIPAYSMQIVKLLVSVIEQV 638
ILI++ AIPAY M K V + +
Sbjct: 230 ILIKSVATAIPAYPMACFKFPKGVCDTI 257
>gb|EMJ21003.1| hypothetical protein PRUPE_ppa026469mg, partial [Prunus persica]
Length = 212
Score = 121 bits (304), Expect = 2e-25
Identities = 63/155 (40%), Positives = 96/155 (61%)
Frame = +3
Query: 168 GKWKGVKAARRGPILSHIFFADDLILFGEATNTQAKCTEDVLSKF*RMSGQRVNSEKSKL 347
GKWK VK+ + GPI+SH+F DDLILF EA+ +A+ + L F + SGQ V+ +KS +
Sbjct: 1 GKWKPVKSFQTGPIVSHLFLVDDLILFTEASTQRARMMKGCLDLFCQASGQTVSFDKSTV 60
Query: 348 FILANILVRTARVLSANFGIPLTGDLGKYLGVPLMHNRMNGRMFGYVVEKMRKKLSGWKT 527
F N + A+ +S +G PLT +LGKYLG+ ++H+R+ + ++ K+ +L+ WK+
Sbjct: 61 FCSPNTIRALAQEISFIYGSPLTDNLGKYLGMHILHSRVTRSTYSSLLSKIHCRLANWKS 120
Query: 528 KFLSKSTRSILIETTIVAIPAYSMQIVKLLVSVIE 632
K LS + R+ LI IP YSMQ L V + +
Sbjct: 121 KLLSSAGRATLIHAITSVIPIYSMQNYLLKVHLYQ 155
>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 120 bits (300), Expect = 5e-25
Identities = 68/223 (30%), Positives = 119/223 (53%), Gaps = 10/223 (4%)
Frame = +3
Query: 3 GLEDFLIKLIM-F*SSTPLSIIWNGGRSENIQPSKGAERSSSM---------EVLGHMIS 152
G + + LIM F SS S I NG ++ P++G + + + MI
Sbjct: 601 GFDGRWVNLIMEFVSSVTYSFIINGSVCGSVVPARGLRQGDPLSPYLFIMVADAFSKMIQ 660
Query: 153 KSIENGKWKGVKAARRGPILSHIFFADDLILFGEATNTQAKCTEDVLSKF*RMSGQRVNS 332
+ +++ + G KA+R GP +SH+FFADD +LF A + D+L+++ SGQ++N
Sbjct: 661 RKVQDKQLHGAKASRSGPEISHLFFADDSLLFTRANRQECTIIVDILNQYELASGQKINY 720
Query: 333 EKSKLFILANILVRTARVLSANFGIPLTGDLGKYLGVPLMHNRMNGRMFGYVVEKMRKKL 512
EKS++ + V L+ + KYLG+P + R +F +++++ KKL
Sbjct: 721 EKSEVSYSRGVSVSQKDELTNILNMRQVDRHEKYLGIPSISGRSKKAIFDSLIDRIWKKL 780
Query: 513 SGWKTKFLSKSTRSILIETTIVAIPAYSMQIVKLLVSVIEQVK 641
GWK K LS++ + +L+++ I AIP Y M + K V +I++++
Sbjct: 781 QGWKEKLLSRAGKEVLLKSVIQAIPTYLMGVYKFPVFIIQKIQ 823