BLASTX nr result

ID: Catharanthus22_contig00012910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00012910
         (1323 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79781.1| hypothetical protein VITISV_041886 [Vitis vinifera]    52   3e-09
emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]    52   2e-08
emb|CAN73532.1| hypothetical protein VITISV_012827 [Vitis vinifera]    46   6e-06
ref|XP_002325877.1| predicted protein [Populus trichocarpa]            58   8e-06
ref|XP_002325876.1| predicted protein [Populus trichocarpa]            58   8e-06

>emb|CAN79781.1| hypothetical protein VITISV_041886 [Vitis vinifera]
          Length = 530

 Score = 52.0 bits (123), Expect(2) = 3e-09
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = -3

Query: 1219 CCDPTTARCYVSRNVVFDEASSWRPLEK 1136
            CCDPTT +CY SRNVVFDE+SSW   EK
Sbjct: 404  CCDPTTGKCYTSRNVVFDESSSWWSSEK 431



 Score = 37.4 bits (85), Expect(2) = 3e-09
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = -2

Query: 1283 KFDKKVIRCIFVGYDSRRKG 1224
            K DKK +RC+ VGYDS+RKG
Sbjct: 382  KMDKKAVRCVLVGYDSQRKG 401


>emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]
          Length = 1300

 Score = 52.0 bits (123), Expect(2) = 2e-08
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = -3

Query: 1219 CCDPTTARCYVSRNVVFDEASSWRPLEK 1136
            CCDPTT +CY SRNVVFDE+SSW   EK
Sbjct: 682  CCDPTTGKCYTSRNVVFDESSSWWSSEK 709



 Score = 35.0 bits (79), Expect(2) = 2e-08
 Identities = 13/19 (68%), Positives = 16/19 (84%)
 Frame = -2

Query: 1283 KFDKKVIRCIFVGYDSRRK 1227
            K DKK +RC+ VGYDS+RK
Sbjct: 660  KMDKKAVRCVLVGYDSQRK 678


>emb|CAN73532.1| hypothetical protein VITISV_012827 [Vitis vinifera]
          Length = 1194

 Score = 45.8 bits (107), Expect(2) = 6e-06
 Identities = 19/28 (67%), Positives = 22/28 (78%)
 Frame = -3

Query: 1219 CCDPTTARCYVSRNVVFDEASSWRPLEK 1136
            CC+PTT + Y SRNVVFDE+SSW   EK
Sbjct: 679  CCNPTTGKYYTSRNVVFDESSSWWSSEK 706



 Score = 32.3 bits (72), Expect(2) = 6e-06
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = -2

Query: 1283 KFDKKVIRCIFVGYDSRRK 1227
            K DKK +RC+ VGYDS+ K
Sbjct: 657  KMDKKXVRCVLVGYDSQXK 675


>ref|XP_002325877.1| predicted protein [Populus trichocarpa]
          Length = 164

 Score = 58.2 bits (139), Expect = 8e-06
 Identities = 23/55 (41%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
 Frame = -2

Query: 161 LKKLNNTNYNSWGSCM*SHLESQDLLEYVKRSLTIPPDGDE--AAIKRWKVRAAK 3
           +KKLN+TNYN+W +CM S+++ QDL E V  S T+ P+ ++    +++WK++  K
Sbjct: 10  IKKLNHTNYNTWSTCMMSYMQGQDLWEVVNGSETVQPEAEDTNGTLRKWKIKVGK 64


>ref|XP_002325876.1| predicted protein [Populus trichocarpa]
          Length = 264

 Score = 58.2 bits (139), Expect = 8e-06
 Identities = 23/55 (41%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
 Frame = -2

Query: 161 LKKLNNTNYNSWGSCM*SHLESQDLLEYVKRSLTIPPDGDE--AAIKRWKVRAAK 3
           +KKLN+TNYN+W +CM S+++ QDL E V  S T+ P+ ++    +++WK++  K
Sbjct: 10  IKKLNHTNYNTWSTCMMSYMQGQDLWEVVNGSETVQPEAEDTNGTLRKWKIKVGK 64


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