BLASTX nr result
ID: Catharanthus22_contig00012910
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus22_contig00012910 (1323 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN79781.1| hypothetical protein VITISV_041886 [Vitis vinifera] 52 3e-09 emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera] 52 2e-08 emb|CAN73532.1| hypothetical protein VITISV_012827 [Vitis vinifera] 46 6e-06 ref|XP_002325877.1| predicted protein [Populus trichocarpa] 58 8e-06 ref|XP_002325876.1| predicted protein [Populus trichocarpa] 58 8e-06 >emb|CAN79781.1| hypothetical protein VITISV_041886 [Vitis vinifera] Length = 530 Score = 52.0 bits (123), Expect(2) = 3e-09 Identities = 21/28 (75%), Positives = 23/28 (82%) Frame = -3 Query: 1219 CCDPTTARCYVSRNVVFDEASSWRPLEK 1136 CCDPTT +CY SRNVVFDE+SSW EK Sbjct: 404 CCDPTTGKCYTSRNVVFDESSSWWSSEK 431 Score = 37.4 bits (85), Expect(2) = 3e-09 Identities = 14/20 (70%), Positives = 17/20 (85%) Frame = -2 Query: 1283 KFDKKVIRCIFVGYDSRRKG 1224 K DKK +RC+ VGYDS+RKG Sbjct: 382 KMDKKAVRCVLVGYDSQRKG 401 >emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera] Length = 1300 Score = 52.0 bits (123), Expect(2) = 2e-08 Identities = 21/28 (75%), Positives = 23/28 (82%) Frame = -3 Query: 1219 CCDPTTARCYVSRNVVFDEASSWRPLEK 1136 CCDPTT +CY SRNVVFDE+SSW EK Sbjct: 682 CCDPTTGKCYTSRNVVFDESSSWWSSEK 709 Score = 35.0 bits (79), Expect(2) = 2e-08 Identities = 13/19 (68%), Positives = 16/19 (84%) Frame = -2 Query: 1283 KFDKKVIRCIFVGYDSRRK 1227 K DKK +RC+ VGYDS+RK Sbjct: 660 KMDKKAVRCVLVGYDSQRK 678 >emb|CAN73532.1| hypothetical protein VITISV_012827 [Vitis vinifera] Length = 1194 Score = 45.8 bits (107), Expect(2) = 6e-06 Identities = 19/28 (67%), Positives = 22/28 (78%) Frame = -3 Query: 1219 CCDPTTARCYVSRNVVFDEASSWRPLEK 1136 CC+PTT + Y SRNVVFDE+SSW EK Sbjct: 679 CCNPTTGKYYTSRNVVFDESSSWWSSEK 706 Score = 32.3 bits (72), Expect(2) = 6e-06 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = -2 Query: 1283 KFDKKVIRCIFVGYDSRRK 1227 K DKK +RC+ VGYDS+ K Sbjct: 657 KMDKKXVRCVLVGYDSQXK 675 >ref|XP_002325877.1| predicted protein [Populus trichocarpa] Length = 164 Score = 58.2 bits (139), Expect = 8e-06 Identities = 23/55 (41%), Positives = 39/55 (70%), Gaps = 2/55 (3%) Frame = -2 Query: 161 LKKLNNTNYNSWGSCM*SHLESQDLLEYVKRSLTIPPDGDE--AAIKRWKVRAAK 3 +KKLN+TNYN+W +CM S+++ QDL E V S T+ P+ ++ +++WK++ K Sbjct: 10 IKKLNHTNYNTWSTCMMSYMQGQDLWEVVNGSETVQPEAEDTNGTLRKWKIKVGK 64 >ref|XP_002325876.1| predicted protein [Populus trichocarpa] Length = 264 Score = 58.2 bits (139), Expect = 8e-06 Identities = 23/55 (41%), Positives = 39/55 (70%), Gaps = 2/55 (3%) Frame = -2 Query: 161 LKKLNNTNYNSWGSCM*SHLESQDLLEYVKRSLTIPPDGDE--AAIKRWKVRAAK 3 +KKLN+TNYN+W +CM S+++ QDL E V S T+ P+ ++ +++WK++ K Sbjct: 10 IKKLNHTNYNTWSTCMMSYMQGQDLWEVVNGSETVQPEAEDTNGTLRKWKIKVGK 64