BLASTX nr result
ID: Catharanthus22_contig00012905
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00012905
(1056 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tpg|DAA57563.1| TPA: hypothetical protein ZEAMMB73_276663 [Zea m... 64 1e-07
ref|NP_001140314.1| uncharacterized protein LOC100272359 [Zea ma... 64 1e-07
gb|AFW85044.1| hypothetical protein ZEAMMB73_708833 [Zea mays] 64 1e-07
gb|AFW85043.1| EMB1417 [Zea mays] 64 1e-07
ref|NP_001150239.1| EMB1417 [Zea mays] gi|195637738|gb|ACG38337.... 64 1e-07
ref|XP_006644734.1| PREDICTED: pentatricopeptide repeat-containi... 62 4e-07
gb|EEE55404.1| hypothetical protein OsJ_03510 [Oryza sativa Japo... 62 4e-07
gb|EEC71511.1| hypothetical protein OsI_03797 [Oryza sativa Indi... 62 4e-07
ref|NP_001044296.1| Os01g0757700 [Oryza sativa Japonica Group] g... 62 4e-07
ref|XP_004970013.1| PREDICTED: pentatricopeptide repeat-containi... 61 6e-07
ref|XP_004970011.1| PREDICTED: pentatricopeptide repeat-containi... 61 6e-07
ref|XP_004970010.1| PREDICTED: pentatricopeptide repeat-containi... 61 6e-07
gb|ESW24137.1| hypothetical protein PHAVU_004G106000g [Phaseolus... 61 8e-07
ref|XP_006372373.1| hypothetical protein POPTR_0017s00990g [Popu... 60 1e-06
ref|XP_006836534.1| hypothetical protein AMTR_s00131p00023460 [A... 60 1e-06
ref|XP_004140747.1| PREDICTED: pentatricopeptide repeat-containi... 60 1e-06
ref|XP_002327501.1| predicted protein [Populus trichocarpa] 60 1e-06
gb|EXC05953.1| hypothetical protein L484_014222 [Morus notabilis] 60 2e-06
ref|XP_006422051.1| hypothetical protein CICLE_v10005483mg [Citr... 60 2e-06
gb|EOY23346.1| Pentatricopeptide repeat (PPR) superfamily protei... 60 2e-06
>tpg|DAA57563.1| TPA: hypothetical protein ZEAMMB73_276663 [Zea mays]
Length = 193
Score = 63.9 bits (154), Expect = 1e-07
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +3
Query: 927 VFHHLRIFFKLS*VCAAKGPRPRYPRVWKTRKRIGTISKSQK 1052
V HH++ F VC A+GPRPRYPRVWKTRK+IGTISKSQK
Sbjct: 20 VRHHIK--FNCVVVCGARGPRPRYPRVWKTRKKIGTISKSQK 59
>ref|NP_001140314.1| uncharacterized protein LOC100272359 [Zea mays]
gi|194698952|gb|ACF83560.1| unknown [Zea mays]
gi|224032859|gb|ACN35505.1| unknown [Zea mays]
gi|414880433|tpg|DAA57564.1| TPA: hypothetical protein
ZEAMMB73_276663 [Zea mays] gi|414880434|tpg|DAA57565.1|
TPA: hypothetical protein ZEAMMB73_276663 [Zea mays]
gi|414880435|tpg|DAA57566.1| TPA: hypothetical protein
ZEAMMB73_276663 [Zea mays]
Length = 296
Score = 63.9 bits (154), Expect = 1e-07
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +3
Query: 927 VFHHLRIFFKLS*VCAAKGPRPRYPRVWKTRKRIGTISKSQK 1052
V HH++ F VC A+GPRPRYPRVWKTRK+IGTISKSQK
Sbjct: 20 VRHHIK--FNCVVVCGARGPRPRYPRVWKTRKKIGTISKSQK 59
>gb|AFW85044.1| hypothetical protein ZEAMMB73_708833 [Zea mays]
Length = 287
Score = 63.5 bits (153), Expect = 1e-07
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +3
Query: 927 VFHHLRIFFKLS*VCAAKGPRPRYPRVWKTRKRIGTISKSQK 1052
V HH++ F VC A+GPRPRYPRVWKTRK+IGTISKSQK
Sbjct: 20 VRHHIK--FNSVVVCGARGPRPRYPRVWKTRKKIGTISKSQK 59
>gb|AFW85043.1| EMB1417 [Zea mays]
Length = 296
Score = 63.5 bits (153), Expect = 1e-07
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +3
Query: 927 VFHHLRIFFKLS*VCAAKGPRPRYPRVWKTRKRIGTISKSQK 1052
V HH++ F VC A+GPRPRYPRVWKTRK+IGTISKSQK
Sbjct: 20 VRHHIK--FNSVVVCGARGPRPRYPRVWKTRKKIGTISKSQK 59
>ref|NP_001150239.1| EMB1417 [Zea mays] gi|195637738|gb|ACG38337.1| EMB1417 [Zea mays]
Length = 296
Score = 63.5 bits (153), Expect = 1e-07
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +3
Query: 927 VFHHLRIFFKLS*VCAAKGPRPRYPRVWKTRKRIGTISKSQK 1052
V HH++ F VC A+GPRPRYPRVWKTRK+IGTISKSQK
Sbjct: 20 VRHHIK--FNSIVVCGARGPRPRYPRVWKTRKKIGTISKSQK 59
>ref|XP_006644734.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21190-like
[Oryza brachyantha]
Length = 295
Score = 62.0 bits (149), Expect = 4e-07
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +3
Query: 966 VCAAKGPRPRYPRVWKTRKRIGTISKSQK 1052
VC A+GPRPRYPRVWKTRKRIGT+SKSQK
Sbjct: 31 VCGARGPRPRYPRVWKTRKRIGTVSKSQK 59
>gb|EEE55404.1| hypothetical protein OsJ_03510 [Oryza sativa Japonica Group]
Length = 295
Score = 62.0 bits (149), Expect = 4e-07
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +3
Query: 966 VCAAKGPRPRYPRVWKTRKRIGTISKSQK 1052
VC A+GPRPRYPRVWKTRKRIGT+SKSQK
Sbjct: 31 VCGARGPRPRYPRVWKTRKRIGTVSKSQK 59
>gb|EEC71511.1| hypothetical protein OsI_03797 [Oryza sativa Indica Group]
Length = 295
Score = 62.0 bits (149), Expect = 4e-07
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +3
Query: 966 VCAAKGPRPRYPRVWKTRKRIGTISKSQK 1052
VC A+GPRPRYPRVWKTRKRIGT+SKSQK
Sbjct: 31 VCGARGPRPRYPRVWKTRKRIGTVSKSQK 59
>ref|NP_001044296.1| Os01g0757700 [Oryza sativa Japonica Group]
gi|113533827|dbj|BAF06210.1| Os01g0757700 [Oryza sativa
Japonica Group] gi|215734974|dbj|BAG95696.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 213
Score = 62.0 bits (149), Expect = 4e-07
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +3
Query: 966 VCAAKGPRPRYPRVWKTRKRIGTISKSQK 1052
VC A+GPRPRYPRVWKTRKRIGT+SKSQK
Sbjct: 31 VCGARGPRPRYPRVWKTRKRIGTVSKSQK 59
>ref|XP_004970013.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21190-like
isoform X4 [Setaria italica]
Length = 313
Score = 61.2 bits (147), Expect = 6e-07
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +3
Query: 966 VCAAKGPRPRYPRVWKTRKRIGTISKSQK 1052
VC A+GPRPRYPRVWKTRK+IGTISKSQK
Sbjct: 34 VCGARGPRPRYPRVWKTRKKIGTISKSQK 62
>ref|XP_004970011.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21190-like
isoform X2 [Setaria italica]
Length = 299
Score = 61.2 bits (147), Expect = 6e-07
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +3
Query: 966 VCAAKGPRPRYPRVWKTRKRIGTISKSQK 1052
VC A+GPRPRYPRVWKTRK+IGTISKSQK
Sbjct: 34 VCGARGPRPRYPRVWKTRKKIGTISKSQK 62
>ref|XP_004970010.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21190-like
isoform X1 [Setaria italica]
Length = 311
Score = 61.2 bits (147), Expect = 6e-07
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +3
Query: 966 VCAAKGPRPRYPRVWKTRKRIGTISKSQK 1052
VC A+GPRPRYPRVWKTRK+IGTISKSQK
Sbjct: 32 VCGARGPRPRYPRVWKTRKKIGTISKSQK 60
>gb|ESW24137.1| hypothetical protein PHAVU_004G106000g [Phaseolus vulgaris]
Length = 344
Score = 60.8 bits (146), Expect = 8e-07
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +3
Query: 966 VCAAKGPRPRYPRVWKTRKRIGTISKSQK 1052
VCAAKGPRPRYPRVWKT K+IGTISKS+K
Sbjct: 29 VCAAKGPRPRYPRVWKTNKKIGTISKSEK 57
>ref|XP_006372373.1| hypothetical protein POPTR_0017s00990g [Populus trichocarpa]
gi|550318992|gb|ERP50170.1| hypothetical protein
POPTR_0017s00990g [Populus trichocarpa]
Length = 336
Score = 60.5 bits (145), Expect = 1e-06
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +3
Query: 966 VCAAKGPRPRYPRVWKTRKRIGTISKSQK 1052
VCAAKGPRPRYPRVWKT++RIGTISKS K
Sbjct: 30 VCAAKGPRPRYPRVWKTKRRIGTISKSAK 58
>ref|XP_006836534.1| hypothetical protein AMTR_s00131p00023460 [Amborella trichopoda]
gi|548839073|gb|ERM99387.1| hypothetical protein
AMTR_s00131p00023460 [Amborella trichopoda]
Length = 317
Score = 60.5 bits (145), Expect = 1e-06
Identities = 25/29 (86%), Positives = 28/29 (96%)
Frame = +3
Query: 966 VCAAKGPRPRYPRVWKTRKRIGTISKSQK 1052
+C AKGPRPRYPRVWKTRKRIG+ISKS+K
Sbjct: 20 ICVAKGPRPRYPRVWKTRKRIGSISKSEK 48
>ref|XP_004140747.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21190-like
[Cucumis sativus]
Length = 331
Score = 60.5 bits (145), Expect = 1e-06
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +3
Query: 966 VCAAKGPRPRYPRVWKTRKRIGTISKSQK 1052
VCAAKGPRPRYPRVWKT+KRIGTISK+ K
Sbjct: 47 VCAAKGPRPRYPRVWKTKKRIGTISKAAK 75
>ref|XP_002327501.1| predicted protein [Populus trichocarpa]
Length = 229
Score = 60.5 bits (145), Expect = 1e-06
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +3
Query: 966 VCAAKGPRPRYPRVWKTRKRIGTISKSQK 1052
VCAAKGPRPRYPRVWKT++RIGTISKS K
Sbjct: 1 VCAAKGPRPRYPRVWKTKRRIGTISKSAK 29
>gb|EXC05953.1| hypothetical protein L484_014222 [Morus notabilis]
Length = 305
Score = 59.7 bits (143), Expect = 2e-06
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = +3
Query: 966 VCAAKGPRPRYPRVWKTRKRIGTISKSQKF 1055
VCAAKGPRPRY RVWKT KRIGT+SKS KF
Sbjct: 30 VCAAKGPRPRYARVWKTNKRIGTVSKSAKF 59
>ref|XP_006422051.1| hypothetical protein CICLE_v10005483mg [Citrus clementina]
gi|568875045|ref|XP_006490621.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g21190-like [Citrus sinensis]
gi|557523924|gb|ESR35291.1| hypothetical protein
CICLE_v10005483mg [Citrus clementina]
Length = 310
Score = 59.7 bits (143), Expect = 2e-06
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = +3
Query: 966 VCAAKGPRPRYPRVWKTRKRIGTISKSQK 1052
VCAA+GPRPRYPRVWK RKRIGTISKS K
Sbjct: 29 VCAARGPRPRYPRVWKARKRIGTISKSAK 57
>gb|EOY23346.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 2
[Theobroma cacao]
Length = 238
Score = 59.7 bits (143), Expect = 2e-06
Identities = 25/29 (86%), Positives = 28/29 (96%)
Frame = +3
Query: 966 VCAAKGPRPRYPRVWKTRKRIGTISKSQK 1052
VCAAKGPRPRYPRVWK+R+RIGT+SKS K
Sbjct: 3 VCAAKGPRPRYPRVWKSRRRIGTVSKSAK 31