BLASTX nr result

ID: Catharanthus22_contig00012902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00012902
         (222 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]                 114   2e-23
gb|EMJ04526.1| hypothetical protein PRUPE_ppa020104mg, partial [...   113   3e-23
gb|ABD63193.1| gag-pol polyprotein, putative [Asparagus officina...   112   7e-23
gb|EMJ11389.1| hypothetical protein PRUPE_ppa017790mg [Prunus pe...   111   9e-23
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]                 111   1e-22
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat...   111   1e-22
ref|XP_004292437.1| PREDICTED: uncharacterized protein LOC101306...   110   1e-22
ref|XP_004954917.1| PREDICTED: uncharacterized protein LOC101752...   110   2e-22
gb|AAM94350.1| gag-pol polyprotein [Zea mays]                         110   2e-22
gb|ADB27474.1| gag-pol polyprotein [Melinis minutiflora]              110   2e-22
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]       109   3e-22
ref|XP_004309164.1| PREDICTED: uncharacterized protein LOC101300...   109   3e-22
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa...   109   3e-22
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni...   109   3e-22
gb|AAD19758.1| putative Ty3-gypsy-like retroelement pol polyprot...   109   3e-22
gb|EMJ22494.1| hypothetical protein PRUPE_ppa024499mg, partial [...   109   4e-22
emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]   109   4e-22
emb|CAN68706.1| hypothetical protein VITISV_001642 [Vitis vinifera]   109   4e-22
emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]   109   4e-22
gb|EOY26248.1| Uncharacterized protein TCM_046829 [Theobroma cacao]   108   6e-22

>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
          Length = 1518

 Score =  114 bits (284), Expect = 2e-23
 Identities = 55/73 (75%), Positives = 63/73 (86%)
 Frame = +2

Query: 2   AINRITIRYKFPILRLGYMLDRLSGAKVFTKINLRSGYHQIRIRMGDE*KTAFKTKNGLY 181
           AIN IT++Y+FPI RL  MLD LSGA +F+KI+LR GYHQ+RIR GDE KTAFKTK+GLY
Sbjct: 674 AINNITVKYRFPIPRLDDMLDELSGASIFSKIDLRQGYHQVRIREGDEWKTAFKTKHGLY 733

Query: 182 ESLVMPFGLSNAP 220
           E LVMPFGLSNAP
Sbjct: 734 EWLVMPFGLSNAP 746


>gb|EMJ04526.1| hypothetical protein PRUPE_ppa020104mg, partial [Prunus persica]
          Length = 428

 Score =  113 bits (282), Expect = 3e-23
 Identities = 53/73 (72%), Positives = 65/73 (89%)
 Frame = +2

Query: 2   AINRITIRYKFPILRLGYMLDRLSGAKVFTKINLRSGYHQIRIRMGDE*KTAFKTKNGLY 181
           AIN+IT++Y+FPI RL +MLD LSGAK+F KI+LRSGYHQIR+R GDE KTAFKT++GL+
Sbjct: 2   AINKITVKYRFPIPRLDHMLDHLSGAKIFLKIDLRSGYHQIRMRPGDEWKTAFKTRDGLF 61

Query: 182 ESLVMPFGLSNAP 220
           E LVMPFGL+N P
Sbjct: 62  EWLVMPFGLTNVP 74


>gb|ABD63193.1| gag-pol polyprotein, putative [Asparagus officinalis]
          Length = 358

 Score =  112 bits (279), Expect = 7e-23
 Identities = 53/73 (72%), Positives = 65/73 (89%)
 Frame = +2

Query: 2   AINRITIRYKFPILRLGYMLDRLSGAKVFTKINLRSGYHQIRIRMGDE*KTAFKTKNGLY 181
           AIN+IT++Y+FPI RL  MLD +SGA +F+KI+L+SGYHQIRIR GDE KTAFKTK+GLY
Sbjct: 7   AINKITVKYRFPIPRLDDMLDMMSGATIFSKIDLKSGYHQIRIRPGDEWKTAFKTKDGLY 66

Query: 182 ESLVMPFGLSNAP 220
           E +VMPFGL+NAP
Sbjct: 67  EWMVMPFGLTNAP 79


>gb|EMJ11389.1| hypothetical protein PRUPE_ppa017790mg [Prunus persica]
          Length = 1485

 Score =  111 bits (278), Expect = 9e-23
 Identities = 55/73 (75%), Positives = 65/73 (89%)
 Frame = +2

Query: 2   AINRITIRYKFPILRLGYMLDRLSGAKVFTKINLRSGYHQIRIRMGDE*KTAFKTKNGLY 181
           AIN+IT++Y+FPI RL  MLD LSG+KVF+KI+LRSGYHQIRIR GDE KTAFK+K+GL+
Sbjct: 684 AINKITVKYRFPIPRLEDMLDVLSGSKVFSKIDLRSGYHQIRIRPGDEWKTAFKSKDGLF 743

Query: 182 ESLVMPFGLSNAP 220
           E LVMPFGLSN P
Sbjct: 744 EWLVMPFGLSNTP 756


>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
          Length = 1475

 Score =  111 bits (277), Expect = 1e-22
 Identities = 54/73 (73%), Positives = 64/73 (87%)
 Frame = +2

Query: 2   AINRITIRYKFPILRLGYMLDRLSGAKVFTKINLRSGYHQIRIRMGDE*KTAFKTKNGLY 181
           AIN ITI+Y+FPI RL  +LD LSGA++F+KI+LR GYHQ+RI+ GDE KTAFKTK+GLY
Sbjct: 662 AINNITIKYRFPIPRLDDILDELSGAQLFSKIDLRQGYHQVRIKEGDEWKTAFKTKHGLY 721

Query: 182 ESLVMPFGLSNAP 220
           E LVMPFGLSNAP
Sbjct: 722 EWLVMPFGLSNAP 734


>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
          Length = 1358

 Score =  111 bits (277), Expect = 1e-22
 Identities = 53/73 (72%), Positives = 63/73 (86%)
 Frame = +2

Query: 2   AINRITIRYKFPILRLGYMLDRLSGAKVFTKINLRSGYHQIRIRMGDE*KTAFKTKNGLY 181
           AIN IT++Y++PI RL  MLD L GAK+F+KI+LR GYHQIR++ GDE KTAFKTKNGLY
Sbjct: 719 AINNITVKYRYPIPRLDDMLDELHGAKIFSKIDLRRGYHQIRMQKGDEWKTAFKTKNGLY 778

Query: 182 ESLVMPFGLSNAP 220
           E LVMPFGL+NAP
Sbjct: 779 EWLVMPFGLTNAP 791


>ref|XP_004292437.1| PREDICTED: uncharacterized protein LOC101306407 [Fragaria vesca
           subsp. vesca]
          Length = 1300

 Score =  110 bits (276), Expect = 1e-22
 Identities = 53/73 (72%), Positives = 65/73 (89%)
 Frame = +2

Query: 2   AINRITIRYKFPILRLGYMLDRLSGAKVFTKINLRSGYHQIRIRMGDE*KTAFKTKNGLY 181
           AIN+I +RY+FPI RL  MLD L+GAKVF+KI+LRSGYHQIR+R GDE KTAFKT++GL+
Sbjct: 727 AINKIAVRYRFPIPRLEDMLDHLAGAKVFSKIDLRSGYHQIRMRPGDEWKTAFKTRDGLF 786

Query: 182 ESLVMPFGLSNAP 220
           E +VMPFGL+NAP
Sbjct: 787 EWMVMPFGLTNAP 799


>ref|XP_004954917.1| PREDICTED: uncharacterized protein LOC101752491 [Setaria italica]
          Length = 1295

 Score =  110 bits (274), Expect = 2e-22
 Identities = 54/73 (73%), Positives = 63/73 (86%)
 Frame = +2

Query: 2    AINRITIRYKFPILRLGYMLDRLSGAKVFTKINLRSGYHQIRIRMGDE*KTAFKTKNGLY 181
            AIN IT+RY+ PI RL  MLD LSG+ +FTKI+LRSGYHQIR+++GDE KTAFKTK GLY
Sbjct: 845  AINAITVRYRHPIPRLDDMLDELSGSTIFTKIDLRSGYHQIRMKIGDEWKTAFKTKFGLY 904

Query: 182  ESLVMPFGLSNAP 220
            E LVMPFGL+NAP
Sbjct: 905  EWLVMPFGLTNAP 917


>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
          Length = 1618

 Score =  110 bits (274), Expect = 2e-22
 Identities = 55/73 (75%), Positives = 63/73 (86%)
 Frame = +2

Query: 2   AINRITIRYKFPILRLGYMLDRLSGAKVFTKINLRSGYHQIRIRMGDE*KTAFKTKNGLY 181
           AIN ITIRY+ PI RL  MLD LSGA VF+K++LRSGYHQIR+++GDE KTAFKTK GLY
Sbjct: 779 AINNITIRYRHPIPRLDDMLDELSGAIVFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLY 838

Query: 182 ESLVMPFGLSNAP 220
           E LVMPFGL+NAP
Sbjct: 839 EWLVMPFGLTNAP 851


>gb|ADB27474.1| gag-pol polyprotein [Melinis minutiflora]
          Length = 256

 Score =  110 bits (274), Expect = 2e-22
 Identities = 55/73 (75%), Positives = 63/73 (86%)
 Frame = +2

Query: 2   AINRITIRYKFPILRLGYMLDRLSGAKVFTKINLRSGYHQIRIRMGDE*KTAFKTKNGLY 181
           AIN ITIRY+ PI RL  MLD LSGA VF+K++LRSGYHQIR+++GDE KTAFKTK GLY
Sbjct: 8   AINNITIRYRHPIPRLDDMLDELSGAIVFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLY 67

Query: 182 ESLVMPFGLSNAP 220
           E LVMPFGL+NAP
Sbjct: 68  EWLVMPFGLTNAP 80


>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
          Length = 1587

 Score =  109 bits (273), Expect = 3e-22
 Identities = 55/73 (75%), Positives = 63/73 (86%)
 Frame = +2

Query: 2    AINRITIRYKFPILRLGYMLDRLSGAKVFTKINLRSGYHQIRIRMGDE*KTAFKTKNGLY 181
            AIN ITIRY+ PI RL  MLD LSG+ VF+KI+LRSGYHQIR+++GDE KTAFKTK GLY
Sbjct: 804  AINNITIRYRHPIPRLDDMLDELSGSLVFSKIDLRSGYHQIRMKLGDEWKTAFKTKFGLY 863

Query: 182  ESLVMPFGLSNAP 220
            E LVMPFGL+NAP
Sbjct: 864  EWLVMPFGLTNAP 876


>ref|XP_004309164.1| PREDICTED: uncharacterized protein LOC101300012 [Fragaria vesca
           subsp. vesca]
          Length = 1034

 Score =  109 bits (273), Expect = 3e-22
 Identities = 54/73 (73%), Positives = 65/73 (89%)
 Frame = +2

Query: 2   AINRITIRYKFPILRLGYMLDRLSGAKVFTKINLRSGYHQIRIRMGDE*KTAFKTKNGLY 181
           AIN+ITI+Y+FPI +L  MLD L G+ VF+KI+LRSGYHQIRI++GDE KTAFK+K+GLY
Sbjct: 721 AINKITIKYRFPIPQLEDMLDVLGGSVVFSKIDLRSGYHQIRIKLGDEWKTAFKSKDGLY 780

Query: 182 ESLVMPFGLSNAP 220
           E LVMPFGLSNAP
Sbjct: 781 EWLVMPFGLSNAP 793


>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|15217296|gb|AAK92640.1|AC079634_1 Putative
            retroelement [Oryza sativa Japonica Group]
            gi|31431373|gb|AAP53161.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1708

 Score =  109 bits (273), Expect = 3e-22
 Identities = 55/73 (75%), Positives = 63/73 (86%)
 Frame = +2

Query: 2    AINRITIRYKFPILRLGYMLDRLSGAKVFTKINLRSGYHQIRIRMGDE*KTAFKTKNGLY 181
            AIN ITIRY+ PI RL  MLD LSG+ VF+KI+LRSGYHQIR+++GDE KTAFKTK GLY
Sbjct: 804  AINNITIRYRHPIPRLDDMLDELSGSLVFSKIDLRSGYHQIRMKLGDEWKTAFKTKFGLY 863

Query: 182  ESLVMPFGLSNAP 220
            E LVMPFGL+NAP
Sbjct: 864  EWLVMPFGLTNAP 876


>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1616

 Score =  109 bits (273), Expect = 3e-22
 Identities = 55/73 (75%), Positives = 63/73 (86%)
 Frame = +2

Query: 2    AINRITIRYKFPILRLGYMLDRLSGAKVFTKINLRSGYHQIRIRMGDE*KTAFKTKNGLY 181
            AIN ITIRY+ PI RL  MLD LSG+ VF+KI+LRSGYHQIR+++GDE KTAFKTK GLY
Sbjct: 804  AINNITIRYRHPIPRLDDMLDELSGSLVFSKIDLRSGYHQIRMKLGDEWKTAFKTKFGLY 863

Query: 182  ESLVMPFGLSNAP 220
            E LVMPFGL+NAP
Sbjct: 864  EWLVMPFGLTNAP 876


>gb|AAD19758.1| putative Ty3-gypsy-like retroelement pol polyprotein [Arabidopsis
           thaliana]
          Length = 587

 Score =  109 bits (273), Expect = 3e-22
 Identities = 54/73 (73%), Positives = 64/73 (87%)
 Frame = +2

Query: 2   AINRITIRYKFPILRLGYMLDRLSGAKVFTKINLRSGYHQIRIRMGDE*KTAFKTKNGLY 181
           AIN+ITI+Y+FPI +L  MLD LSG+KVF+KI+LRSGYHQIRIR GDE KT FK+K+GLY
Sbjct: 402 AINKITIKYRFPIPQLDDMLDELSGSKVFSKIDLRSGYHQIRIRPGDEWKTDFKSKDGLY 461

Query: 182 ESLVMPFGLSNAP 220
           E  VMPFG+SNAP
Sbjct: 462 EWQVMPFGMSNAP 474


>gb|EMJ22494.1| hypothetical protein PRUPE_ppa024499mg, partial [Prunus persica]
          Length = 1364

 Score =  109 bits (272), Expect = 4e-22
 Identities = 53/73 (72%), Positives = 64/73 (87%)
 Frame = +2

Query: 2   AINRITIRYKFPILRLGYMLDRLSGAKVFTKINLRSGYHQIRIRMGDE*KTAFKTKNGLY 181
           AIN+IT++Y+FPI RL  ML+ L+G+K F+KI+LRSGYHQIRIR GDE KTAFKT +GLY
Sbjct: 633 AINKITVKYRFPIPRLEAMLEELAGSKWFSKIDLRSGYHQIRIREGDEWKTAFKTPDGLY 692

Query: 182 ESLVMPFGLSNAP 220
           E LVMPFG+SNAP
Sbjct: 693 EWLVMPFGMSNAP 705


>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
          Length = 1521

 Score =  109 bits (272), Expect = 4e-22
 Identities = 53/73 (72%), Positives = 64/73 (87%)
 Frame = +2

Query: 2   AINRITIRYKFPILRLGYMLDRLSGAKVFTKINLRSGYHQIRIRMGDE*KTAFKTKNGLY 181
           AIN+ITI+Y+FPI RL  MLD + G+ +F+KI+LRSGYHQIRIR GDE KT+FKTK+GLY
Sbjct: 681 AINKITIKYRFPIPRLDDMLDMMVGSVIFSKIDLRSGYHQIRIRPGDEWKTSFKTKDGLY 740

Query: 182 ESLVMPFGLSNAP 220
           E LVMPFGL+NAP
Sbjct: 741 EWLVMPFGLTNAP 753


>emb|CAN68706.1| hypothetical protein VITISV_001642 [Vitis vinifera]
          Length = 1082

 Score =  109 bits (272), Expect = 4e-22
 Identities = 53/73 (72%), Positives = 64/73 (87%)
 Frame = +2

Query: 2   AINRITIRYKFPILRLGYMLDRLSGAKVFTKINLRSGYHQIRIRMGDE*KTAFKTKNGLY 181
           AIN+ITI+Y+FPI RL  MLD + G+ +F+KI+LRSGYHQIRIR GDE KT+FKTK+GLY
Sbjct: 510 AINKITIKYRFPIPRLDDMLDMMVGSVIFSKIDLRSGYHQIRIRPGDEWKTSFKTKDGLY 569

Query: 182 ESLVMPFGLSNAP 220
           E LVMPFGL+NAP
Sbjct: 570 EWLVMPFGLTNAP 582


>emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]
          Length = 1392

 Score =  109 bits (272), Expect = 4e-22
 Identities = 53/73 (72%), Positives = 64/73 (87%)
 Frame = +2

Query: 2   AINRITIRYKFPILRLGYMLDRLSGAKVFTKINLRSGYHQIRIRMGDE*KTAFKTKNGLY 181
           AIN+ITI+Y+FPI RL  MLD + G+ +F+KI+LRSGYHQIRIR GDE KT+FKTK+GLY
Sbjct: 640 AINKITIKYRFPIPRLDDMLDMMVGSVIFSKIDLRSGYHQIRIRPGDEWKTSFKTKDGLY 699

Query: 182 ESLVMPFGLSNAP 220
           E LVMPFGL+NAP
Sbjct: 700 EWLVMPFGLTNAP 712


>gb|EOY26248.1| Uncharacterized protein TCM_046829 [Theobroma cacao]
          Length = 672

 Score =  108 bits (271), Expect = 6e-22
 Identities = 53/73 (72%), Positives = 65/73 (89%)
 Frame = +2

Query: 2   AINRITIRYKFPILRLGYMLDRLSGAKVFTKINLRSGYHQIRIRMGDE*KTAFKTKNGLY 181
           AIN+ITI+Y+FPI RL  MLD+L G++VF+KI+L+SGYHQIR+R GDE KTAFKT +GL+
Sbjct: 61  AINKITIKYRFPIPRLDEMLDQLVGSRVFSKIDLKSGYHQIRMRDGDEWKTAFKTPDGLF 120

Query: 182 ESLVMPFGLSNAP 220
           E LVMPFGLSNAP
Sbjct: 121 EWLVMPFGLSNAP 133


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