BLASTX nr result

ID: Catharanthus22_contig00012733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00012733
         (510 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004250280.1| PREDICTED: thymidine kinase-like [Solanum ly...    59   9e-07

>ref|XP_004250280.1| PREDICTED: thymidine kinase-like [Solanum lycopersicum]
          Length = 281

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 44/111 (39%), Positives = 57/111 (51%), Gaps = 3/111 (2%)
 Frame = -1

Query: 324 MLTISSMKLVLSPGFFKLNTNTFAVRFYAQNPIFFLCRNMGSSSPLQN--SCFSLKEI-K 154
           ML +S MK +LSP               ++  I F+CR  G  S  +N  S  ++  + K
Sbjct: 1   MLPLSRMKSLLSP-------------VLSRPTIMFVCRGYGVLSTFKNLNSAQTMNPMSK 47

Query: 153 PSTASLKTFKNPSHQTRYQGMEVNSLNQQSTSGEIHVIVGPMFAGKTTTTL 1
            S+    T +N S Q R    E +  N  S SGE+HVIVGPMFAGKTTT L
Sbjct: 48  VSSFRCSTVQNHS-QIRVLSSEASGSNSGSGSGEVHVIVGPMFAGKTTTLL 97


Top