BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00012729
         (2862 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006347775.1| PREDICTED: multisubstrate pseudouridine synt...   941   0.0  
ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synt...   940   0.0  
ref|XP_004230110.1| PREDICTED: multisubstrate pseudouridine synt...   932   0.0  
emb|CBI34194.3| unnamed protein product [Vitis vinifera]              926   0.0  
ref|XP_006471920.1| PREDICTED: multisubstrate pseudouridine synt...   921   0.0  
gb|EOY11114.1| Pseudouridine synthase family protein isoform 2 [...   918   0.0  
gb|EXB39195.1| Multisubstrate pseudouridine synthase 7 [Morus no...   899   0.0  
ref|XP_006432989.1| hypothetical protein CICLE_v10003382mg [Citr...   896   0.0  
ref|XP_004302031.1| PREDICTED: multisubstrate pseudouridine synt...   896   0.0  
gb|EOY11113.1| Pseudouridine synthase family protein, putative i...   896   0.0  
ref|XP_006382775.1| hypothetical protein POPTR_0005s05300g [Popu...   887   0.0  
gb|EMJ09385.1| hypothetical protein PRUPE_ppa020985mg [Prunus pe...   885   0.0  
ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ric...   882   0.0  
ref|XP_004302030.1| PREDICTED: multisubstrate pseudouridine synt...   882   0.0  
ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana] g...   867   0.0  
ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C...   864   0.0  
ref|XP_006577278.1| PREDICTED: multisubstrate pseudouridine synt...   834   0.0  
ref|XP_002884472.1| pseudouridylate synthase [Arabidopsis lyrata...   833   0.0  
ref|XP_006300094.1| hypothetical protein CARUB_v10016322mg [Caps...   831   0.0  
gb|ESW19147.1| hypothetical protein PHAVU_006G100200g [Phaseolus...   829   0.0  

>ref|XP_006347775.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Solanum
            tuberosum]
          Length = 685

 Score =  941 bits (2433), Expect = 0.0
 Identities = 490/693 (70%), Positives = 564/693 (81%), Gaps = 4/693 (0%)
 Frame = +2

Query: 221  MKSLDESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSLVAPPELVDEKE 400
            MK++DESDVGI CYIS LPGFRGILKQRYSDFIVNEVDL+  VV LT L AP E  + K+
Sbjct: 1    MKTMDESDVGISCYISNLPGFRGILKQRYSDFIVNEVDLDENVVHLTLLEAPKECSENKD 60

Query: 401  VKVSDEPNKSYDAEIQSFRAVAGDSDADMLKTFIDKIGPGVEVNIEPIVLSPSSDKSHRT 580
            V +SD+ N+SY  EI+SFR++AG+SDAD LK FID++  G +V+ E IVLSPSSDKSHRT
Sbjct: 61   VNISDQLNRSYVTEIESFRSLAGNSDADKLKAFIDELNSGADVSDESIVLSPSSDKSHRT 120

Query: 581  AVHNFFKERLKFLVTDTVDGPDTTSKCIRVRLNMGNTHGRD-GSKKRKNRDDKPYDSRGS 757
            A+HNFFKERLKFLVTDT+DG +  SKC+RVRLN    +GR   S+KRK+RDDK YDSRGS
Sbjct: 121  AIHNFFKERLKFLVTDTIDGVEDQSKCVRVRLNNDRNNGRGRSSRKRKDRDDKRYDSRGS 180

Query: 758  ESWPESLGKFLRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFK 937
            +SWP  LGKFLRFHL KENKDTQEAL VI KMLG+Q RSFGFAGTKDKR+VSTQRVTVFK
Sbjct: 181  DSWPGHLGKFLRFHLFKENKDTQEALNVIAKMLGVQLRSFGFAGTKDKRAVSTQRVTVFK 240

Query: 938  QRASRLAALNERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKESVNAL 1117
            Q+AS+LAALN+RLIGIK+GDFCHV EGL+LGQL+GNRFTITLRGV AESEDIIK S  AL
Sbjct: 241  QQASKLAALNKRLIGIKVGDFCHVKEGLLLGQLYGNRFTITLRGVSAESEDIIKASAVAL 300

Query: 1118 TKQGFINYFGLQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGEKEAIRRVREYYKE 1297
             K GFINYFGLQRFGSSSVPTHLIGA LLRGEWKAAV LILDPREGEK AI  VREYYKE
Sbjct: 301  GKHGFINYFGLQRFGSSSVPTHLIGAALLRGEWKAAVSLILDPREGEKNAISTVREYYKE 360

Query: 1298 TGDIEGTLRQLPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYLWNHAA 1477
            +GDI+GTLRQLPR+LVAEKAI+QCL++SPGN+LQALKAIPRTLRMMYVHSYQSYLWNHAA
Sbjct: 361  SGDIDGTLRQLPRYLVAEKAILQCLKRSPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAA 420

Query: 1478 SMRIEKYGVDQVVLGDLVYWKEQCAGKEIGTAYSEREDGSSNDTQNPDHLDEISETDMPE 1657
            SMR++K+G DQVVLGDLVY KE+   KE  +  +E ED + N+  +  +LDEISETD+PE
Sbjct: 421  SMRVQKHGFDQVVLGDLVYSKEEYKVKE--SFVAECEDVNDNNMDDYSNLDEISETDLPE 478

Query: 1658 ETISFVKAVTEEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSINLLESAH 1837
            E    VK + EEDL +GTY +DDV+LPLPGSRVIYP NDIGEVY DLA+KD I+L E+AH
Sbjct: 479  ERNIPVKVINEEDLKSGTYAIDDVLLPLPGSRVIYPSNDIGEVYCDLAQKDDISLTETAH 538

Query: 1838 SIKEFSITSMTGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSRSAEQANLGNG 2017
             IKEFSIT+MTG YRRVFQK KDFEWE+L+Y DG +PLAETDFDVI  S  ++       
Sbjct: 539  KIKEFSITNMTGAYRRVFQKPKDFEWELLSYTDGTIPLAETDFDVIANSVKSKVREEDPT 598

Query: 2018 KGRHEDAIDNEEQSVS---FPGSLKDSSKDNEGGSDRTGFVQTEISDGSRSDNQETQTAL 2188
             G  E   D+   SV      G + +   +NE G      +Q+E S  S  + +E+Q AL
Sbjct: 599  NGSKELPADSSAISVGGDMLSGKVCEEKINNEAG------MQSEKSQ-SGGNAEESQMAL 651

Query: 2189 KLSFTLPASCYATMAIRELLKTSTSVAFHKTLN 2287
            KLSFTLPASCYATMA+RELLKTSTSVAFHK+LN
Sbjct: 652  KLSFTLPASCYATMAVRELLKTSTSVAFHKSLN 684


>ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Vitis
            vinifera]
          Length = 694

 Score =  940 bits (2430), Expect = 0.0
 Identities = 485/697 (69%), Positives = 556/697 (79%), Gaps = 7/697 (1%)
 Frame = +2

Query: 221  MKSLDESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSLVAPPELVDEKE 400
            MK L+ESDVGI  YIS+LPGFRGILKQRY DFIVNEVD +G VV LTSL APPE +++ E
Sbjct: 1    MKHLEESDVGISFYISQLPGFRGILKQRYCDFIVNEVDSDGNVVHLTSLDAPPESMEKNE 60

Query: 401  VKVSDEPNKSYDAEIQSFRAVAGDSDADMLKTFIDKIGPGVEVNIEPIVLSPSSDKSHRT 580
             K+SD+ NK Y +EI+ FR++ GDSD + LK  ID++  G+E  + PIVLS SSDKSHRT
Sbjct: 61   TKISDQSNKGYASEIELFRSLVGDSDVECLKGLIDQVASGIEDGVSPIVLSSSSDKSHRT 120

Query: 581  AVHNFFKERLKFLVTDTVDGPDTTSKCIRVRLNMGNTHGRD-GSKKRKNRDDKPYDSRGS 757
            AVHNFFKE LKFLVTDT+DGPDT+SKCIRVRLN G +H     S+KRK+R DKP+DSRGS
Sbjct: 121  AVHNFFKENLKFLVTDTIDGPDTSSKCIRVRLNSGGSHNNGRNSRKRKDRRDKPFDSRGS 180

Query: 758  ESWPESLGKFLRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFK 937
            ++W E +GKFLRFHL+KENKDTQEA+G+IGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFK
Sbjct: 181  DNWSEHVGKFLRFHLYKENKDTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFK 240

Query: 938  QRASRLAALNERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKESVNAL 1117
            Q A+RLAALNERLIGIK+GDFCHV EGLVLGQL GNRFTITLRGVVA+SE+ IK S +AL
Sbjct: 241  QHANRLAALNERLIGIKVGDFCHVREGLVLGQLLGNRFTITLRGVVADSEETIKASADAL 300

Query: 1118 TKQGFINYFGLQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGEKEAIRRVREYYKE 1297
             + GFINYFGLQRFGS SVPTHLIGA LLRGEW+ AV LILDPREGE++AIR+ REYYKE
Sbjct: 301  GRLGFINYFGLQRFGSGSVPTHLIGAALLRGEWETAVSLILDPREGERDAIRKAREYYKE 360

Query: 1298 TGDIEGTLRQLPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYLWNHAA 1477
            + DIEGTLRQ PRHLVAE+AI+QCL+K PGN+LQALKAIPRTLRMMYVHSYQSYLWNHAA
Sbjct: 361  SDDIEGTLRQFPRHLVAERAILQCLKKYPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAA 420

Query: 1478 SMRIEKYGVDQVVLGDLVYWKEQCAGKEIGTAYSEREDGSSNDTQNPDHLDEISETDMPE 1657
            SMR++ YG  QVVLGDLVY K   A K      SE +D   +D  +  H DEISETD+PE
Sbjct: 421  SMRVQNYGTKQVVLGDLVYCKGDNAEKVTRVVNSEFDDDGCSDAFDSSHFDEISETDLPE 480

Query: 1658 ETISFVKAVTEEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSINLLESAH 1837
            E    VKA+  EDL  G Y +DDVVLPLPGSR IYP NDI +VYHD AKKD+I+L ESAH
Sbjct: 481  ERNDPVKALDAEDLLTGNYTIDDVVLPLPGSRAIYPTNDIAQVYHDFAKKDAISLTESAH 540

Query: 1838 SIKEFSITSMTGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSR-----SAEQA 2002
            S+KEFSIT+MTGG+RRVFQK  DFEWE+LTY +GN+PLAETD+D I KS+       E +
Sbjct: 541  SVKEFSITNMTGGFRRVFQKPIDFEWELLTYTEGNIPLAETDWDKITKSKPSNIIGGEDS 600

Query: 2003 NLGNGKGRHEDAIDNEEQSVSFPGSLKDSSKDNE-GGSDRTGFVQTEISDGSRSDNQETQ 2179
              GN K   E++    +QS SF  ++  S+ +NE  G    G  Q E      S   E Q
Sbjct: 601  RNGNEK---ENSFQCMKQSESFEHNVNLSTDNNEPNGVTEIGLPQVE--PQFESGAPEAQ 655

Query: 2180 TALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLNT 2290
             ALKLSFTLPASCYATMAIRELLKTSTSVAF KTLNT
Sbjct: 656  RALKLSFTLPASCYATMAIRELLKTSTSVAFQKTLNT 692


>ref|XP_004230110.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Solanum
            lycopersicum]
          Length = 685

 Score =  932 bits (2409), Expect = 0.0
 Identities = 486/693 (70%), Positives = 561/693 (80%), Gaps = 4/693 (0%)
 Frame = +2

Query: 221  MKSLDESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSLVAPPELVDEKE 400
            MK++DESDVGI CYIS LPGFRGILKQRYSDFIVNEVDL+  VV L SL AP E  + K+
Sbjct: 1    MKTMDESDVGISCYISNLPGFRGILKQRYSDFIVNEVDLDENVVHLNSLEAPKECSENKD 60

Query: 401  VKVSDEPNKSYDAEIQSFRAVAGDSDADMLKTFIDKIGPGVEVNIEPIVLSPSSDKSHRT 580
            V +SD+ N+SY  EI+SFR++AG+SDAD LK FID++  G +V+ E IVLSPSSDKSHRT
Sbjct: 61   VNISDQLNRSYVTEIESFRSLAGNSDADKLKAFIDELNSGADVSDESIVLSPSSDKSHRT 120

Query: 581  AVHNFFKERLKFLVTDTVDGPDTTSKCIRVRLNMGNTHGRDG-SKKRKNRDDKPYDSRGS 757
             +HNFFKERLKFLVTDT+DG +  SKC+RVRLN    +GR   S+KRK+R+DK YDSRGS
Sbjct: 121  EIHNFFKERLKFLVTDTIDGVEDQSKCVRVRLNNDRNNGRGRYSRKRKDRNDKRYDSRGS 180

Query: 758  ESWPESLGKFLRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFK 937
            +SWP  LGKFLRFHL KENKDTQEAL VI KMLG+Q RSFGFAGTKDKR+VSTQRVTVFK
Sbjct: 181  DSWPGHLGKFLRFHLFKENKDTQEALNVIAKMLGVQLRSFGFAGTKDKRAVSTQRVTVFK 240

Query: 938  QRASRLAALNERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKESVNAL 1117
            Q+AS+LAALN+RLIGIK+GDFCHV EGL+LGQL+GNRFTITLRGV AESEDIIK S  AL
Sbjct: 241  QQASKLAALNKRLIGIKVGDFCHVKEGLLLGQLYGNRFTITLRGVSAESEDIIKASAVAL 300

Query: 1118 TKQGFINYFGLQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGEKEAIRRVREYYKE 1297
             K GFINYFGLQRFGSSSVPTHLIGA LLRGEWKAAV LILDPREGEK  I  VREYYKE
Sbjct: 301  GKHGFINYFGLQRFGSSSVPTHLIGAALLRGEWKAAVSLILDPREGEKNTISTVREYYKE 360

Query: 1298 TGDIEGTLRQLPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYLWNHAA 1477
            +GDI+GTLRQLPR+LVAEKAI+Q L++SPGN+LQALKAIPRTLRMMYVHSYQSYLWNHAA
Sbjct: 361  SGDIDGTLRQLPRYLVAEKAILQSLKRSPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAA 420

Query: 1478 SMRIEKYGVDQVVLGDLVYWKEQCAGKEIGTAYSEREDGSSNDTQNPDHLDEISETDMPE 1657
            SMR++K+G DQVVLGDLVY KE    KE  +  +E ED + N+  +  +LDEISETD+PE
Sbjct: 421  SMRVQKHGFDQVVLGDLVYSKEDYKVKE--SFVAECEDVNDNNMDDYSNLDEISETDLPE 478

Query: 1658 ETISFVKAVTEEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSINLLESAH 1837
            E    VK + EEDL +GTY +DDV+LPL GSRVIYP NDIGEVY DLA+KD I+L E+AH
Sbjct: 479  ERNIPVKVINEEDLKSGTYTIDDVLLPLSGSRVIYPSNDIGEVYRDLAQKDGISLTETAH 538

Query: 1838 SIKEFSITSMTGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSRSAEQANLGNG 2017
             IKEFSIT+MTG YRRVFQK KDFEWE+L+Y DG +PLAETDFDVI KS  ++       
Sbjct: 539  KIKEFSITNMTGAYRRVFQKPKDFEWELLSYTDGTIPLAETDFDVIAKSVKSKVIEEVPS 598

Query: 2018 KGRHEDAIDNEEQSVS---FPGSLKDSSKDNEGGSDRTGFVQTEISDGSRSDNQETQTAL 2188
             G  E   D+   SV      G + + + +NE G      +Q+E S  S  + +E+Q AL
Sbjct: 599  NGSKELPADSSAISVGGDMLSGKVCEETINNEAG------MQSEKSQ-SGGNAEESQMAL 651

Query: 2189 KLSFTLPASCYATMAIRELLKTSTSVAFHKTLN 2287
            KLSFTLPASCYATMA+RELLKTSTSVAFHK+LN
Sbjct: 652  KLSFTLPASCYATMAVRELLKTSTSVAFHKSLN 684


>emb|CBI34194.3| unnamed protein product [Vitis vinifera]
          Length = 693

 Score =  926 bits (2394), Expect = 0.0
 Identities = 481/697 (69%), Positives = 552/697 (79%), Gaps = 7/697 (1%)
 Frame = +2

Query: 221  MKSLDESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSLVAPPELVDEKE 400
            MK L+ESDVGI  YIS+LPGFRGILKQRY DFIVNEVD +G VV LTSL APPE +++ E
Sbjct: 1    MKHLEESDVGISFYISQLPGFRGILKQRYCDFIVNEVDSDGNVVHLTSLDAPPESMEKNE 60

Query: 401  VKVSDEPNKSYDAEIQSFRAVAGDSDADMLKTFIDKIGPGVEVNIEPIVLSPSSDKSHRT 580
             K+SD+ NK Y +EI+ FR++ GDSD + LK  ID++  G+E  + PIVLS SSDKSHRT
Sbjct: 61   TKISDQSNKGYASEIELFRSLVGDSDVECLKGLIDQVASGIEDGVSPIVLSSSSDKSHRT 120

Query: 581  AVHNFFKERLKFLVTDTVDGPDTTSKCIRVRLNMGNTHGRD-GSKKRKNRDDKPYDSRGS 757
            AVHNFFKE LKFLVTDT+DGPDT+SKCIRVRLN G +H     S+KRK+R DKP+DSRGS
Sbjct: 121  AVHNFFKENLKFLVTDTIDGPDTSSKCIRVRLNSGGSHNNGRNSRKRKDRRDKPFDSRGS 180

Query: 758  ESWPESLGKFLRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFK 937
            ++W E +GKFLRFHL+KENKDTQEA+G+IGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFK
Sbjct: 181  DNWSEHVGKFLRFHLYKENKDTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFK 240

Query: 938  QRASRLAALNERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKESVNAL 1117
            Q A+RLAALNERLIGIK+GDFCHV EGLVLGQL GNRFTITLRGVVA+SE+ IK S +AL
Sbjct: 241  QHANRLAALNERLIGIKVGDFCHVREGLVLGQLLGNRFTITLRGVVADSEETIKASADAL 300

Query: 1118 TKQGFINYFGLQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGEKEAIRRVREYYKE 1297
             + GFINYFGLQRFGS SVPTHLIGA LLRGEW+ AV LILDPREG+   + + REYYKE
Sbjct: 301  GRLGFINYFGLQRFGSGSVPTHLIGAALLRGEWETAVSLILDPREGDI-LLLKAREYYKE 359

Query: 1298 TGDIEGTLRQLPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYLWNHAA 1477
            + DIEGTLRQ PRHLVAE+AI+QCL+K PGN+LQALKAIPRTLRMMYVHSYQSYLWNHAA
Sbjct: 360  SDDIEGTLRQFPRHLVAERAILQCLKKYPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAA 419

Query: 1478 SMRIEKYGVDQVVLGDLVYWKEQCAGKEIGTAYSEREDGSSNDTQNPDHLDEISETDMPE 1657
            SMR++ YG  QVVLGDLVY K   A K      SE +D   +D  +  H DEISETD+PE
Sbjct: 420  SMRVQNYGTKQVVLGDLVYCKGDNAEKVTRVVNSEFDDDGCSDAFDSSHFDEISETDLPE 479

Query: 1658 ETISFVKAVTEEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSINLLESAH 1837
            E    VKA+  EDL  G Y +DDVVLPLPGSR IYP NDI +VYHD AKKD+I+L ESAH
Sbjct: 480  ERNDPVKALDAEDLLTGNYTIDDVVLPLPGSRAIYPTNDIAQVYHDFAKKDAISLTESAH 539

Query: 1838 SIKEFSITSMTGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSR-----SAEQA 2002
            S+KEFSIT+MTGG+RRVFQK  DFEWE+LTY +GN+PLAETD+D I KS+       E +
Sbjct: 540  SVKEFSITNMTGGFRRVFQKPIDFEWELLTYTEGNIPLAETDWDKITKSKPSNIIGGEDS 599

Query: 2003 NLGNGKGRHEDAIDNEEQSVSFPGSLKDSSKDNE-GGSDRTGFVQTEISDGSRSDNQETQ 2179
              GN K   E++    +QS SF  ++  S+ +NE  G    G  Q E      S   E Q
Sbjct: 600  RNGNEK---ENSFQCMKQSESFEHNVNLSTDNNEPNGVTEIGLPQVE--PQFESGAPEAQ 654

Query: 2180 TALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLNT 2290
             ALKLSFTLPASCYATMAIRELLKTSTSVAF KTLNT
Sbjct: 655  RALKLSFTLPASCYATMAIRELLKTSTSVAFQKTLNT 691


>ref|XP_006471920.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1
            [Citrus sinensis]
          Length = 739

 Score =  921 bits (2381), Expect = 0.0
 Identities = 476/705 (67%), Positives = 560/705 (79%), Gaps = 11/705 (1%)
 Frame = +2

Query: 206  ISSSRMKSLDESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSLVAPPE- 382
            ++++ MK++DESD GILC+IS LPGFRGILKQRY DFIVNEVD + KVV LTSL  PPE 
Sbjct: 40   LTTTTMKTVDESDAGILCFISNLPGFRGILKQRYCDFIVNEVDTDRKVVHLTSLDVPPEE 99

Query: 383  -LVDEKEVKVSDEPNKSYDAEIQSFRAVAGDSDADMLKTFIDKIGPGV-EVNIEPIVLSP 556
              V+  E K SD+ N+SY +EI+SFR++AGDSDA  L+T I+++  G  E +I PIVLS 
Sbjct: 100  AAVEHNETKASDQLNRSYASEIESFRSLAGDSDAQCLETLINQVTSGKNEDSIPPIVLSA 159

Query: 557  SSDKSHRTAVHNFFKERLKFLVTDTVDGPDTTSKCIRVRLNMG---NTHGRDGSKKRKNR 727
            +SDKSHRTA+HNFFK+  KFLVTDTVDGPD +SKCIRVRLN G   N+ GR+ SKKRK R
Sbjct: 160  NSDKSHRTAIHNFFKDNFKFLVTDTVDGPDASSKCIRVRLNSGGNNNSMGRN-SKKRKER 218

Query: 728  DDKPYDSRGSESWPESLGKFLRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRS 907
             D P+DSRGSE+WPE LGKFLRFHL+KENKDTQEALG+I KMLGI PRSFGFAGTKDKRS
Sbjct: 219  GDNPFDSRGSENWPEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRS 278

Query: 908  VSTQRVTVFKQRASRLAALNERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESE 1087
            VSTQRVTVFKQRAS+LAALN+RLIGI+LGDFC+V EGL+LGQL GNRFTITLRGVV +SE
Sbjct: 279  VSTQRVTVFKQRASKLAALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSE 338

Query: 1088 DIIKESVNALTKQGFINYFGLQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGEKEA 1267
            D+IK S N+L + GFINYFGLQRFGS SVPTHL+GATLLRGEWK+AV +ILDPREGE+  
Sbjct: 339  DVIKASANSLGRNGFINYFGLQRFGSGSVPTHLVGATLLRGEWKSAVKMILDPREGERNE 398

Query: 1268 IRRVREYYKETGDIEGTLRQLPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHS 1447
            I + REYYKET DI+GTLR+LPRHLVAE+AI+QCL+K PGN+LQALKAIPRTLRMMYVHS
Sbjct: 399  ISKAREYYKETDDIDGTLRKLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHS 458

Query: 1448 YQSYLWNHAASMRIEKYGVDQVVLGDLVYWKEQCAGKEIGTAYSEREDGSSNDTQNPDHL 1627
            YQS+LWNHAAS R++K+G + VV+GDLV+ K     KE+G    E E  SSND  +  HL
Sbjct: 459  YQSFLWNHAASARVQKHGTEHVVVGDLVFCKGDDTEKELGCVNPEFEYESSNDADDSSHL 518

Query: 1628 DEISETDMPEETISFVKAVTEEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKK 1807
            DE+ ETD P+   + VK VT ED+++G Y +DDVVLPLPGSRVIYP ND+ EVYH LA+K
Sbjct: 519  DEVPETDHPDGRHNLVKTVTAEDINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHLAEK 578

Query: 1808 DSINLLESAHSIKEFSITSMTGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSR 1987
            D INL ES H++KEFSITSMTG YRRVFQK  DFEWE+LTY DGN PLAETD D I K +
Sbjct: 579  DGINLTESLHNVKEFSITSMTGNYRRVFQKPMDFEWELLTYIDGNKPLAETDLDKIAKDK 638

Query: 1988 SA-----EQANLGNGKGRHEDAIDNEEQSVSFPGSLKDSSKDNEGGSDRTGFVQTEISDG 2152
             A     E+A  GN K   +D  D  +QS S    +K S+++NE    +    Q  +   
Sbjct: 639  LANIVKEEEAVCGNKK---KDPSDCMKQSESLSKDIKLSTENNEAACAKE-VKQPHVESV 694

Query: 2153 SRSDNQETQTALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLN 2287
              +D+Q  Q ALKL  TLP+SCYATMAIRELLKTSTSVAFHKTLN
Sbjct: 695  CGADSQGKQMALKLGLTLPSSCYATMAIRELLKTSTSVAFHKTLN 739


>gb|EOY11114.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
          Length = 732

 Score =  918 bits (2372), Expect = 0.0
 Identities = 478/707 (67%), Positives = 553/707 (78%), Gaps = 11/707 (1%)
 Frame = +2

Query: 200  PEISSSR----MKSLDESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSL 367
            P I SS     M ++ ESDVGILC+IS LPGFRGILKQRYSDFIVNEVD EG VV LTSL
Sbjct: 32   PVIKSSNSLTLMTTITESDVGILCFISHLPGFRGILKQRYSDFIVNEVDTEGNVVHLTSL 91

Query: 368  VAPPELVDEKEVKVSDEPNKSYDAEIQSFRAVAGDSDADMLKTFIDKIGPGVEVNIEPIV 547
             APPE V E E K  D+ NK Y +EI  FR++AGD+DAD L+ FI++I  G E +I PIV
Sbjct: 92   DAPPEAVQEGETKTPDQLNKCYASEIIKFRSLAGDTDADRLEAFINQITSGSEEDICPIV 151

Query: 548  LSPSSDKSHRTAVHNFFKERLKFLVTDTVDGPDTTSKCIRVRLNMGNTHGRDGSKKRKNR 727
            LSP SDKSHRTA+HNFFKE L+FLVTDTVDGPD++SKCIRVRLN GN +    SKKRK R
Sbjct: 152  LSPDSDKSHRTAMHNFFKENLRFLVTDTVDGPDSSSKCIRVRLNSGNNNKGRNSKKRKER 211

Query: 728  DDKPYDSRGSESWPESLGKFLRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRS 907
             DKPYDSRGS  WPE LGKFLRFHL+KENKDTQEALG+IGKMLGIQPRSFGFAGTKDKRS
Sbjct: 212  GDKPYDSRGSSHWPEHLGKFLRFHLYKENKDTQEALGLIGKMLGIQPRSFGFAGTKDKRS 271

Query: 908  VSTQRVTVFKQRASRLAALNERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESE 1087
            VSTQRVTVFKQ ASRLAALNERLIGIK+GDFC+V +  +LGQL GNRFTI LRG+VA+SE
Sbjct: 272  VSTQRVTVFKQHASRLAALNERLIGIKVGDFCYVKDDFLLGQLLGNRFTIILRGIVADSE 331

Query: 1088 DIIKESVNALTKQGFINYFGLQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGEKEA 1267
            + IK SV +L + GFINYFGLQRFGS S+PTH IGATLLRGEW+AA   ILDPREGE++ 
Sbjct: 332  ETIKASVESLGRHGFINYFGLQRFGSGSIPTHRIGATLLRGEWQAAASTILDPREGERDF 391

Query: 1268 IRRVREYYKETGDIEGTLRQLPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHS 1447
            + + REYYKETGDIEGTLRQLPRHLVAE+A++QCL+K PGN+LQALKAIPRTLRMMYVHS
Sbjct: 392  VSKAREYYKETGDIEGTLRQLPRHLVAERAMLQCLKKCPGNYLQALKAIPRTLRMMYVHS 451

Query: 1448 YQSYLWNHAASMRIEKYGVDQVVLGDLVYWKEQCAGKEIGTAYSEREDGSSNDTQNPDHL 1627
            YQSYLWNHAASMR+EKYG ++VVLGDLVY K   A K +    SE ED +  D  +   L
Sbjct: 452  YQSYLWNHAASMRVEKYGSNEVVLGDLVYCKGNDAEK-VKVVPSEHEDNNFEDAYDCSQL 510

Query: 1628 DEISETDMPEETISFVKAVTEEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKK 1807
            DEIS TD+PE   + VKA+T  D+S G Y ++DVVLP+PGSR+IYP NDI  VYHD+AKK
Sbjct: 511  DEISGTDLPEGKNNLVKAITAADISTGNYTIEDVVLPMPGSRIIYPVNDIANVYHDMAKK 570

Query: 1808 DSINLLESAHSIKEFSITSMTGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSR 1987
            D I+L ES H+IKEFSITSMTG YRRVFQK  DFEWE+L+Y DG++ L+ETD D I K++
Sbjct: 571  DGISLTESVHNIKEFSITSMTGSYRRVFQKPIDFEWELLSYTDGSIALSETDLDKIAKTK 630

Query: 1988 SA----EQANLGNGKGRHEDAIDNEEQSVSFPGSLKDSSKDNEGGSDRTGFVQTE---IS 2146
                  E+      +G  +D+ D+ E   SF    +D  K + G  +  G  + E   I 
Sbjct: 631  PVNLVKEEKPTDGTEG--QDSSDHMEHIESF----EDDKKFSTGNVEVEGSREAEPPQIH 684

Query: 2147 DGSRSDNQETQTALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLN 2287
                S++  TQ ALKL+FTLPASCYATMAIRELLKTSTSVAFHKTLN
Sbjct: 685  SLPESNSLGTQKALKLAFTLPASCYATMAIRELLKTSTSVAFHKTLN 731


>gb|EXB39195.1| Multisubstrate pseudouridine synthase 7 [Morus notabilis]
          Length = 784

 Score =  899 bits (2322), Expect = 0.0
 Identities = 464/689 (67%), Positives = 542/689 (78%), Gaps = 4/689 (0%)
 Frame = +2

Query: 212  SSRMKSLDESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSLVAPPELVD 391
            ++ MK+LDESDVGI CYIS LPGFRGILKQRYSDFIVNEVD +G VV LTSL APPE  +
Sbjct: 57   TTAMKTLDESDVGIFCYISNLPGFRGILKQRYSDFIVNEVDTDGNVVHLTSLDAPPETRE 116

Query: 392  EKEVKVSDEPNKSYDAEIQSFRAVAGDSDADMLKTFIDKIGPGVEVNIEPIVLSPSSDKS 571
            E   +  D   KSY +EI+SFR +AGDSDA+ L+  I++I  G    + PIVLSPSSDKS
Sbjct: 117  ETRTETIDAGTKSYTSEIESFRCLAGDSDAESLEALINQINSGGGEEVSPIVLSPSSDKS 176

Query: 572  HRTAVHNFFKERLKFLVTDTVDGPDTTSKCIRVRLNMG--NTHGRDGSKKRKNRDDKPYD 745
            HRT +HNFFK+  KFLVTDTVDGPD +SKCIRVRLN G  N HGR+ SKKRK R DKP+D
Sbjct: 177  HRTEIHNFFKKNFKFLVTDTVDGPDASSKCIRVRLNSGRHNNHGRN-SKKRKERGDKPFD 235

Query: 746  SRGSESWPESLGKFLRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQRV 925
             RGS+ WPE +GKFLRFHL+KENKD+QEALG+IGKMLGIQPRSFGFAGTKDKRSVSTQRV
Sbjct: 236  RRGSDDWPEHVGKFLRFHLYKENKDSQEALGLIGKMLGIQPRSFGFAGTKDKRSVSTQRV 295

Query: 926  TVFKQRASRLAALNERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKES 1105
            TVFKQRASRLAALN+RLIGI++GDFC+V E LVLGQL GNRFT+TLRGVVA+SE+ IK S
Sbjct: 296  TVFKQRASRLAALNDRLIGIQVGDFCYVKEELVLGQLSGNRFTVTLRGVVADSEETIKAS 355

Query: 1106 VNALTKQGFINYFGLQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGE--KEAIRRV 1279
             +AL ++GFINYFGLQRFGS SVPT+LIGA L RGEWK AV +ILDPREG+   + I + 
Sbjct: 356  ASALGRRGFINYFGLQRFGSGSVPTYLIGAMLFRGEWKDAVHMILDPREGDILLDVITKA 415

Query: 1280 REYYKETGDIEGTLRQLPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSY 1459
            REYYKET DI+GTLRQLPRHLVAE AI+QCL+K PGN+LQALKAIPRTLRMMYVHSYQSY
Sbjct: 416  REYYKETNDIDGTLRQLPRHLVAENAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSY 475

Query: 1460 LWNHAASMRIEKYGVDQVVLGDLVYWKEQCAGKEIGTAYSEREDGSSNDTQNPDHLDEIS 1639
            LWNHAAS R++KYG DQVV+GDLV+ KE    K  GTA ++ +D  SN       +DE+S
Sbjct: 476  LWNHAASTRVQKYGTDQVVVGDLVFCKEHNIEKVKGTASADCKDEDSNAIFGSHDIDEVS 535

Query: 1640 ETDMPEETISFVKAVTEEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSIN 1819
              ++PEE  + VK V  ED+ AG + +DDVVLPLPGSRVI P NDI +VYHDLAKKD+I+
Sbjct: 536  GAELPEERNNPVKVVAAEDILAGNFAIDDVVLPLPGSRVILPTNDIAQVYHDLAKKDAIS 595

Query: 1820 LLESAHSIKEFSITSMTGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSRSAEQ 1999
            L ESAH++KEFSITSMTG YRRVFQK  D+EWE+LTY +G +PLAETD D+I KS+ A  
Sbjct: 596  LTESAHNVKEFSITSMTGSYRRVFQKPVDYEWELLTYTNGTIPLAETDLDIIAKSKPAHV 655

Query: 2000 ANLGNGKGRHEDAIDNEEQSVSFPGSLKDSSKDNEGGSDRTGFVQTEISDGSRSDNQETQ 2179
            A      G  E    + ++S          + DN+   +R   +Q E + G+ S  QE Q
Sbjct: 656  AEENEVNGNEE----STKRSKRVENEAVLQTDDNKVDGEREAELQAESTCGTNS--QEPQ 709

Query: 2180 TALKLSFTLPASCYATMAIRELLKTSTSV 2266
             ALKLSFTLPASCYATMAIRELLKTSTSV
Sbjct: 710  MALKLSFTLPASCYATMAIRELLKTSTSV 738


>ref|XP_006432989.1| hypothetical protein CICLE_v10003382mg [Citrus clementina]
            gi|557535111|gb|ESR46229.1| hypothetical protein
            CICLE_v10003382mg [Citrus clementina]
          Length = 697

 Score =  896 bits (2316), Expect = 0.0
 Identities = 467/694 (67%), Positives = 549/694 (79%), Gaps = 11/694 (1%)
 Frame = +2

Query: 221  MKSLDESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSLVAPPE--LVDE 394
            MK++DESD GILC+IS LPGFRGILKQRY DFIVNEVD + KVV LTSL  PPE   V+ 
Sbjct: 1    MKTVDESDAGILCFISNLPGFRGILKQRYCDFIVNEVDTDRKVVHLTSLDVPPEEAAVEH 60

Query: 395  KEVKVSDEPNKSYDAEIQSFRAVAGDSDADMLKTFIDKIGPGV-EVNIEPIVLSPSSDKS 571
             E K SD+ N+SY +EI+SFR++AGDSDA  L+T I+++  G  E +I PIVLS +SDKS
Sbjct: 61   NETKASDQLNRSYASEIESFRSLAGDSDAQCLETLINQVTSGKNEDSIPPIVLSANSDKS 120

Query: 572  HRTAVHNFFKERLKFLVTDTVDGPDTTSKCIRVRLNMG---NTHGRDGSKKRKNRDDKPY 742
            HRTA+HNFFK+  KFLVTDTVDGPD +SKCIRVRLN G   N+ GR+ SKKRK R D P+
Sbjct: 121  HRTAIHNFFKDNFKFLVTDTVDGPDASSKCIRVRLNSGGNNNSMGRN-SKKRKERGDNPF 179

Query: 743  DSRGSESWPESLGKFLRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQR 922
            DSRGSE+WPE LGKFLRFHL+KENKDTQEALG+I KMLGI PRSFGFAGTKDKRSVSTQR
Sbjct: 180  DSRGSENWPEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQR 239

Query: 923  VTVFKQRASRLAALNERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKE 1102
            VTVFKQRAS+LAALN+RLIGI+LGDFC+V EGL+LGQL GNRFTITLRGVV +SED+IK 
Sbjct: 240  VTVFKQRASKLAALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKA 299

Query: 1103 SVNALTKQGFINYFGLQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGEKEAIRRVR 1282
            S N+L + GFINYFGLQRFGS SVPTHL+GATLLRGEWK+AV +ILDPREG+   + + R
Sbjct: 300  SANSLGRNGFINYFGLQRFGSGSVPTHLVGATLLRGEWKSAVKMILDPREGDI-LLFKAR 358

Query: 1283 EYYKETGDIEGTLRQLPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYL 1462
            EYYKET DI+GTLR+LPRHLVAE+AI+QCL+K PGN+LQALKAIPRTLRMMYVHSYQS+L
Sbjct: 359  EYYKETDDIDGTLRKLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSFL 418

Query: 1463 WNHAASMRIEKYGVDQVVLGDLVYWKEQCAGKEIGTAYSEREDGSSNDTQNPDHLDEISE 1642
            WNHAAS R++K+G + VV+GDLV+ K     KE+G    E E  SSND  +  HLDE+ E
Sbjct: 419  WNHAASARVQKHGTEHVVVGDLVFCKGDDTEKELGCVNPEFEYESSNDADDSSHLDEVPE 478

Query: 1643 TDMPEETISFVKAVTEEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSINL 1822
            TD P+   + VK VT ED+++G Y +DDVVLPLPGSRVIYP ND+ EVYH LA+KD INL
Sbjct: 479  TDHPDGRHNLVKTVTAEDINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHLAEKDGINL 538

Query: 1823 LESAHSIKEFSITSMTGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSRSA--- 1993
             ES H++KEFSITSMTG YRRVFQK  DFEWE+LTY DGN PLAETD D I K + A   
Sbjct: 539  TESLHNVKEFSITSMTGNYRRVFQKPMDFEWELLTYIDGNKPLAETDLDKIAKDKLANIV 598

Query: 1994 --EQANLGNGKGRHEDAIDNEEQSVSFPGSLKDSSKDNEGGSDRTGFVQTEISDGSRSDN 2167
              E+A  GN K   +D  D  +QS S    +K S+++NE    +    Q  +     +D+
Sbjct: 599  KEEEAVCGNKK---KDPSDCMKQSESLSKDIKLSTENNEAACAKE-VKQPHVESVCGADS 654

Query: 2168 QETQTALKLSFTLPASCYATMAIRELLKTSTSVA 2269
            Q  Q ALKL  TLP+SCYATMAIRELLKTSTSV+
Sbjct: 655  QGKQMALKLGLTLPSSCYATMAIRELLKTSTSVS 688


>ref|XP_004302031.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform 2
            [Fragaria vesca subsp. vesca]
          Length = 693

 Score =  896 bits (2316), Expect = 0.0
 Identities = 460/694 (66%), Positives = 541/694 (77%), Gaps = 10/694 (1%)
 Frame = +2

Query: 236  ESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSLVAPPELVDEKEVKVSD 415
            ES+VGI CYIS LPGFRGILKQRYSDF+VNEVD+EG VV LT+L APPE+V E   K  D
Sbjct: 5    ESEVGIFCYISPLPGFRGILKQRYSDFMVNEVDMEGNVVHLTNLEAPPEVVKENGAKTED 64

Query: 416  EPNKSYDAEIQSFRAVAGDSDADMLKTFIDKIGPGVEVNIEPIVLSPSSDKSHRTAVHNF 595
              +K Y AEI+ FR +A   D + L+ FI ++  G E  + PIVLSP  DK HRTAVHNF
Sbjct: 65   AASKDYSAEIEKFRCLASGEDVERLEAFIREVNSGSEDGVMPIVLSPDYDKVHRTAVHNF 124

Query: 596  FKERLKFLVTDTVDGPDTTSKCIRVRLNMGNTHGRD-GSKKRKNRDDKPYDSRGSESWPE 772
            FKE LKFLVTD VDGPD +SKCIRVRLN G  +GR   SKKRK R DKP+DSRG + W E
Sbjct: 125  FKENLKFLVTDAVDGPDASSKCIRVRLNSGGQNGRGRNSKKRKERGDKPFDSRGVDDWSE 184

Query: 773  SLGKFLRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQRASR 952
             +GKFLRFHL KENKDTQEALGVIGKMLGIQPR+FGFAGTKDKR+V+ QRVTVFKQ ASR
Sbjct: 185  HVGKFLRFHLFKENKDTQEALGVIGKMLGIQPRAFGFAGTKDKRAVTCQRVTVFKQFASR 244

Query: 953  LAALNERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKESVNALTKQGF 1132
            LAALN+RLIGIK+GDFC+V EGL LGQL GNRFTITLRGVVA+SEDII+ S NAL KQGF
Sbjct: 245  LAALNDRLIGIKVGDFCYVKEGLSLGQLLGNRFTITLRGVVADSEDIIQASANALGKQGF 304

Query: 1133 INYFGLQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGEKEAIRRVREYYKETGDIE 1312
            +NYFGLQRFGS S+PTHLIGA+LLRGEWK+ V ++L+PREGE++ I   R+YYKE+ DI+
Sbjct: 305  VNYFGLQRFGSGSIPTHLIGASLLRGEWKSTVSMMLEPREGERDVITEARKYYKESNDID 364

Query: 1313 GTLRQLPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYLWNHAASMRIE 1492
            GTLR+LPR+LVAE+A++QCL+K PGN+ QALKA+PRTLRMMYVHSYQSYLWNHAASMR++
Sbjct: 365  GTLRKLPRYLVAERAVLQCLKKCPGNYSQALKAVPRTLRMMYVHSYQSYLWNHAASMRVQ 424

Query: 1493 KYGVDQVVLGDLVYWKEQCAGKEIGTAYSEREDGSSN-----DTQNPDHLDEISETDMPE 1657
            KYG D+VV+GDLVY K     K  G   SE  D + N     DT +P+HLD+ISET++PE
Sbjct: 425  KYGTDRVVVGDLVYCKGHETEKVTGIVSSECVDENVNDENCDDTFDPNHLDDISETNVPE 484

Query: 1658 ETISFVKAVTEEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSINLLESAH 1837
              +S VKAVT ED++ GTY +DD+VLPLPGSRVI+P+NDI  V+HDLAKKD I+L ES H
Sbjct: 485  ARVSLVKAVTAEDINNGTYTIDDIVLPLPGSRVIFPENDIAAVFHDLAKKDGISLTESVH 544

Query: 1838 SIKEFSITSMTGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSR----SAEQAN 2005
            ++KEFSIT++TG YRRVFQK  DFEW++L Y DGN+PL ETDF+ I K++    + E   
Sbjct: 545  NVKEFSITNVTGSYRRVFQKPVDFEWDILKYIDGNIPLVETDFEKIAKTKPVNVNKEYPT 604

Query: 2006 LGNGKGRHEDAIDNEEQSVSFPGSLKDSSKDNEGGSDRTGFVQTEISDGSRSDNQETQTA 2185
              +G G   D I   E SV+    ++   KDNE  S+       E   G     Q TQ A
Sbjct: 605  GVSGDGSLHDRIKQSECSVN---DVQLPKKDNEVESEGEKLPHVESLGGPIP--QGTQIA 659

Query: 2186 LKLSFTLPASCYATMAIRELLKTSTSVAFHKTLN 2287
            LKLSFTLPASCYATMAIRELLKTSTSVAFHKTLN
Sbjct: 660  LKLSFTLPASCYATMAIRELLKTSTSVAFHKTLN 693


>gb|EOY11113.1| Pseudouridine synthase family protein, putative isoform 1 [Theobroma
            cacao]
          Length = 763

 Score =  896 bits (2315), Expect = 0.0
 Identities = 478/738 (64%), Positives = 554/738 (75%), Gaps = 42/738 (5%)
 Frame = +2

Query: 200  PEISSSR----MKSLDESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSL 367
            P I SS     M ++ ESDVGILC+IS LPGFRGILKQRYSDFIVNEVD EG VV LTSL
Sbjct: 32   PVIKSSNSLTLMTTITESDVGILCFISHLPGFRGILKQRYSDFIVNEVDTEGNVVHLTSL 91

Query: 368  VAPPEL-------------VDEKEVKVSDEPNKSYDAEIQSFRAVAGDSDADMLKTFIDK 508
             APPE+             V E E K  D+ NK Y +EI  FR++AGD+DAD L+ FI++
Sbjct: 92   DAPPEVMIDVFSLNKFTQAVQEGETKTPDQLNKCYASEIIKFRSLAGDTDADRLEAFINQ 151

Query: 509  IGPGVEVNIEPIVLSPSSDKSHRTAVHNFFKERLKFLVTDTVDGPDTTSKCIRVRLNMGN 688
            I  G E +I PIVLSP SDKSHRTA+HNFFKE L+FLVTDTVDGPD++SKCIRVRLN GN
Sbjct: 152  ITSGSEEDICPIVLSPDSDKSHRTAMHNFFKENLRFLVTDTVDGPDSSSKCIRVRLNSGN 211

Query: 689  THGRDGSKKRKNRDDKPYDSRGSESWPESLGKFLRFHLHKENKDTQEALGVIGKMLGIQP 868
             +    SKKRK R DKPYDSRGS  WPE LGKFLRFHL+KENKDTQEALG+IGKMLGIQP
Sbjct: 212  NNKGRNSKKRKERGDKPYDSRGSSHWPEHLGKFLRFHLYKENKDTQEALGLIGKMLGIQP 271

Query: 869  RSFGFAGTKDKRSVSTQRVTVFKQRASRLAALNERLIGIKLGDFCHVNEGLVLGQLHGNR 1048
            RSFGFAGTKDKRSVSTQRVTVFKQ ASRLAALNERLIGIK+GDFC+V +  +LGQL GNR
Sbjct: 272  RSFGFAGTKDKRSVSTQRVTVFKQHASRLAALNERLIGIKVGDFCYVKDDFLLGQLLGNR 331

Query: 1049 FTITLRGVVAESEDIIKESVNALTKQGFINYFGLQRFGSSSVPTHLIGATLLRGEWKAAV 1228
            FTI LRG+VA+SE+ IK SV +L + GFINYFGLQRFGS S+PTH IGATLLRGEW+AA 
Sbjct: 332  FTIILRGIVADSEETIKASVESLGRHGFINYFGLQRFGSGSIPTHRIGATLLRGEWQAAA 391

Query: 1229 DLILDPREGEKEAI------------------RRVREYYKETGDIEGTLRQLPRHLVAEK 1354
              ILDPREG+  ++                  +R REYYKETGDIEGTLRQLPRHLVAE+
Sbjct: 392  STILDPREGDILSLTFFFPFLLGKALFRCLTTQRAREYYKETGDIEGTLRQLPRHLVAER 451

Query: 1355 AIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYLWNHAASMRIEKYGVDQVVLGDLVY 1534
            A++QCL+K PGN+LQALKAIPRTLRMMYVHSYQSYLWNHAASMR+EKYG ++VVLGDLVY
Sbjct: 452  AMLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVEKYGSNEVVLGDLVY 511

Query: 1535 WKEQCAGKEIGTAYSEREDGSSNDTQNPDHLDEISETDMPEETISFVKAVTEEDLSAGTY 1714
             K   A K +    SE ED +  D  +   LDEIS TD+PE   + VKA+T  D+S G Y
Sbjct: 512  CKGNDAEK-VKVVPSEHEDNNFEDAYDCSQLDEISGTDLPEGKNNLVKAITAADISTGNY 570

Query: 1715 NVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSINLLESAHSIKEFSITSMTGGYRRVFQ 1894
             ++DVVLP+PGSR+IYP NDI  VYHD+AKKD I+L ES H+IKEFSITSMTG YRRVFQ
Sbjct: 571  TIEDVVLPMPGSRIIYPVNDIANVYHDMAKKDGISLTESVHNIKEFSITSMTGSYRRVFQ 630

Query: 1895 KLKDFEWEMLTYRDGNVPLAETDFDVIVKSRSA----EQANLGNGKGRHEDAIDNEEQSV 2062
            K  DFEWE+L+Y DG++ L+ETD D I K++      E+      +G  +D+ D+ E   
Sbjct: 631  KPIDFEWELLSYTDGSIALSETDLDKIAKTKPVNLVKEEKPTDGTEG--QDSSDHMEHIE 688

Query: 2063 SFPGSLKDSSKDNEGGSDRTGFVQTE---ISDGSRSDNQETQTALKLSFTLPASCYATMA 2233
            SF    +D  K + G  +  G  + E   I     S++  TQ ALKL+FTLPASCYATMA
Sbjct: 689  SF----EDDKKFSTGNVEVEGSREAEPPQIHSLPESNSLGTQKALKLAFTLPASCYATMA 744

Query: 2234 IRELLKTSTSVAFHKTLN 2287
            IRELLKTSTSVAFHKTLN
Sbjct: 745  IRELLKTSTSVAFHKTLN 762


>ref|XP_006382775.1| hypothetical protein POPTR_0005s05300g [Populus trichocarpa]
            gi|550338143|gb|ERP60572.1| hypothetical protein
            POPTR_0005s05300g [Populus trichocarpa]
          Length = 752

 Score =  887 bits (2291), Expect = 0.0
 Identities = 468/705 (66%), Positives = 550/705 (78%), Gaps = 18/705 (2%)
 Frame = +2

Query: 227  SLDESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSLVAPPELVDEKE-- 400
            S++ESDVGILCYIS+LPGFRGILKQRY+DFIVNEVD +G VV LT L  PP++V+E +  
Sbjct: 54   SMEESDVGILCYISQLPGFRGILKQRYADFIVNEVDTDGNVVHLTCLEPPPQMVEETKEC 113

Query: 401  -VKVSDEP---NKSYDAEIQSFRAVAGDSDADMLKTFIDKIGP--GVEVNIEPIVLSPSS 562
              KVSDE    +KSY+AEI+ FR++AGDSDA+ L++ I ++    G E ++  IVLSP S
Sbjct: 114  GAKVSDEKMSESKSYEAEIELFRSLAGDSDAEKLESLISQVDSCTGSEDSVPHIVLSPDS 173

Query: 563  DKSHRTAVHNFFKERLKFLVTDTVDGPDTTSKCIRVRLNMGNTHGRDG--SKKRKNRDDK 736
            DK+HRTAVHNFFK+  KFLVTDT DGPD +SKCIRVRL+ G  H  +G  SKKRK R +K
Sbjct: 174  DKTHRTAVHNFFKQNFKFLVTDTTDGPDASSKCIRVRLDSGG-HKNNGRNSKKRKERGEK 232

Query: 737  PYDSRGSESWPESLGKFLRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVST 916
            P+DSRGS +WPE LGKFLRFHL+KENKDTQEALG+IGKMLGIQ +SFGFAGTKDKR+VST
Sbjct: 233  PFDSRGSSNWPEHLGKFLRFHLYKENKDTQEALGIIGKMLGIQSKSFGFAGTKDKRAVST 292

Query: 917  QRVTVFKQRASRLAALNERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESEDII 1096
            QRVTVFKQ+ASRLAALN+RLIGIK+GDFCHV EGL+LG+L GNRFT+TLRGV+A+SED I
Sbjct: 293  QRVTVFKQQASRLAALNDRLIGIKVGDFCHVKEGLLLGRLLGNRFTVTLRGVIADSEDTI 352

Query: 1097 KESVNALTKQGFINYFGLQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGE-----K 1261
            K + ++L + GFINYFGLQRFG+ SVPTHLIGA LLRGEWK AV +ILDPREG+      
Sbjct: 353  KAAADSLGRHGFINYFGLQRFGTGSVPTHLIGAALLRGEWKTAVSMILDPREGDILLLFP 412

Query: 1262 EAIRRVREYYKETGDIEGTLRQLPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYV 1441
              IR+ REYYKE+ DIEGTLRQLPRHLVAE+A++QCL+K PG++LQA+KAIPRTLRMMYV
Sbjct: 413  YVIRKAREYYKESNDIEGTLRQLPRHLVAERAVLQCLKKCPGDYLQAMKAIPRTLRMMYV 472

Query: 1442 HSYQSYLWNHAASMRIEKYGVDQVVLGDLVYWKEQCAGKEIGTAYSEREDGSSNDTQNPD 1621
            H YQSYLWNHAAS R++KYG DQV+LGDLVY K   + KE     SE  D + +DT +  
Sbjct: 473  HGYQSYLWNHAASERVQKYGFDQVLLGDLVYCKGDDSEKETVGVNSECNDDNCDDTYDCS 532

Query: 1622 HLDEISETDMPEETISFVKAVTEEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLA 1801
            HLDE S TD+ E   + VK VT ED+S G Y VDDVVLP+PGSRVI+P N+I +VYHDLA
Sbjct: 533  HLDETSGTDLLERKNTLVKVVTVEDMSTGNYTVDDVVLPMPGSRVIFPTNEIAKVYHDLA 592

Query: 1802 KKDSINLLESAHSIKEFSITSMTGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVK 1981
            KKD+INL ES H +KEFSITSMTG YRRVFQK  DFEWE+LTY D N PLAETD D I K
Sbjct: 593  KKDAINLTESVHRVKEFSITSMTGSYRRVFQKPLDFEWELLTYNDSNKPLAETDLDKISK 652

Query: 1982 SRSA---EQANLGNGKGRHEDAIDNEEQSVSFPGSLKDSSKDNEGGSDRTGFVQTEISDG 2152
            + S    +Q   G G     D  D  +  V    S+  SS  NE  S+R    + E    
Sbjct: 653  TGSTNIIKQEEQGKG-DEDNDLSDCTKLPVCSRNSIALSSDTNE-ESER----EVESEQV 706

Query: 2153 SRSDNQETQTALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLN 2287
            S S+ QETQ ALKLS TLPASCYATMAIRELLKTSTSVA+HKTLN
Sbjct: 707  SGSNWQETQMALKLSLTLPASCYATMAIRELLKTSTSVAYHKTLN 751


>gb|EMJ09385.1| hypothetical protein PRUPE_ppa020985mg [Prunus persica]
          Length = 691

 Score =  885 bits (2288), Expect = 0.0
 Identities = 464/686 (67%), Positives = 536/686 (78%), Gaps = 4/686 (0%)
 Frame = +2

Query: 221  MKSLDESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSLVAPPELVDEKE 400
            MK+ +E DVGI CYIS+LPGFRGILKQRYSDF+VNEVD E  VV LT+L AP E V E E
Sbjct: 1    MKTTEEPDVGIFCYISQLPGFRGILKQRYSDFMVNEVDTEENVVHLTNLDAPAETVKEIE 60

Query: 401  VKVSDEPNKSYDAEIQSFRAVAGDSDADMLKTFIDKIGPGVEVNIEPIVLSPSSDKSHRT 580
             K  D  +K Y  EI+SFR++    DA+ L+  I++I  G E +I PIVLSP  DKSHRT
Sbjct: 61   TKTHDATSKDYTTEIESFRSLVDPDDAERLEAIINQINSGSEDSILPIVLSPDYDKSHRT 120

Query: 581  AVHNFFKERLKFLVTDTVDGPDTTSKCIRVRLNMG--NTHGRDGSKKRKNRDDKPYDSRG 754
            AVHNFFKE  KFLVTDTVDGPD +SKCIRVR+N G  N+ GR+ S+KRK R DKP+DSRG
Sbjct: 121  AVHNFFKENFKFLVTDTVDGPDASSKCIRVRINSGGQNSRGRN-SRKRKERGDKPFDSRG 179

Query: 755  SESWPESLGKFLRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVF 934
            S+ W E++GKFLRFHL+KENKDTQEALG+I KMLGIQPRSFGFAGTKDKR+V+TQRVTVF
Sbjct: 180  SDDWSENVGKFLRFHLYKENKDTQEALGIIAKMLGIQPRSFGFAGTKDKRAVTTQRVTVF 239

Query: 935  KQRASRLAALNERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKESVNA 1114
            KQ ASRLAALN+RLIGIK+GDFC+V EGLVLGQL GNRFTITLRGVVA+SED IK SV A
Sbjct: 240  KQLASRLAALNDRLIGIKVGDFCYVKEGLVLGQLLGNRFTITLRGVVADSEDTIKASVIA 299

Query: 1115 LTKQGFINYFGLQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGE--KEAIRRVREY 1288
            L KQGFINYFGLQRFGS SVPTHLIGATLLRGEWK+ V L LDPREG+     +   REY
Sbjct: 300  LGKQGFINYFGLQRFGSGSVPTHLIGATLLRGEWKSTVSLFLDPREGDILLMLLGIAREY 359

Query: 1289 YKETGDIEGTLRQLPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYLWN 1468
            YKET DIEGTLRQLPRHLV+EKAI+QCL+K PGN+LQALKAIPRTLRMMYVHSYQSYLWN
Sbjct: 360  YKETNDIEGTLRQLPRHLVSEKAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWN 419

Query: 1469 HAASMRIEKYGVDQVVLGDLVYWKEQCAGKEIGTAYSEREDGSSNDTQNPDHLDEISETD 1648
            HAASMR++KYG D+VVLGDLVY K     K      S+  D + NDT +P  LD+IS T+
Sbjct: 420  HAASMRVQKYGTDRVVLGDLVYCKGNETEKVSEVVSSKCVDENGNDTLDPIDLDDISGTN 479

Query: 1649 MPEETISFVKAVTEEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSINLLE 1828
            +PEE ++ VKAVT ED+ +G Y +DDVVLP+PGSRVI+P+NDI  V+HDLAKKD+I+L E
Sbjct: 480  LPEERLNLVKAVTAEDILSGNYTIDDVVLPMPGSRVIFPENDIAHVFHDLAKKDAISLTE 539

Query: 1829 SAHSIKEFSITSMTGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSRSAEQANL 2008
            S H++KEFSITSMTG YRRVFQK  DFEWE+L Y DGN PL +TDFD I K++ +     
Sbjct: 540  SVHNVKEFSITSMTGSYRRVFQKPMDFEWEILKYIDGNKPLVDTDFDKIAKTKPSSL--- 596

Query: 2009 GNGKGRHEDAIDNEEQSVSFPGSLKDSSKDNEGGSDRTGFVQTEISDGSRSDNQETQTAL 2188
             N  GR     D  +QS      +   + DN  G+   G    +      ++ QETQTAL
Sbjct: 597  -NEDGRLH---DKTKQSECLDNDIGLQTDDN--GAKAKGEELPQAESLCDTNPQETQTAL 650

Query: 2189 KLSFTLPASCYATMAIRELLKTSTSV 2266
            KLSFTLPASCYATMAIRELLKTSTSV
Sbjct: 651  KLSFTLPASCYATMAIRELLKTSTSV 676


>ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ricinus communis]
            gi|223548191|gb|EEF49682.1| tRNA pseudouridine synthase
            d, putative [Ricinus communis]
          Length = 753

 Score =  882 bits (2280), Expect = 0.0
 Identities = 464/706 (65%), Positives = 546/706 (77%), Gaps = 17/706 (2%)
 Frame = +2

Query: 221  MKSLDESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSLVAPPELVD--- 391
            M +++ESDVGI CYIS++PGFRGILKQRYSDFIVNEVD  G VV LTSL  P E+V+   
Sbjct: 49   MTTIEESDVGISCYISKVPGFRGILKQRYSDFIVNEVDNNGNVVHLTSLHVPREIVEVAE 108

Query: 392  EKEVKVSDEPNKSYDAEIQSFRAVAGDSDADMLKTFIDK-IGPGVEVNIEPIVLSPSSDK 568
            E+E +++++  K+Y AEI+SFR +AGD+D   L+ FI++ I     +NI PI+LSP SDK
Sbjct: 109  EREEEITNQVGKNYAAEIESFRELAGDADTQRLEAFINQVISEDNCINISPILLSPDSDK 168

Query: 569  SHRTAVHNFFKERLKFLVTDTVDGPDTTSKCIRVRLNM-GNTH-GRDGSKKRKNRDDKPY 742
            +HRTA HNFFKE+LKFLVTDTVDGPD +SKCIRVRLN  GN + G   SKKRK+R+DKP+
Sbjct: 169  AHRTATHNFFKEKLKFLVTDTVDGPDASSKCIRVRLNSRGNINEGNRNSKKRKDRNDKPF 228

Query: 743  DSRGSESWPESLGKFLRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQR 922
            DSRGS+ WPE LGKFLRFHL+KENKDTQEA+G+IGKMLGIQPRSFGFAGTKDKRSVSTQR
Sbjct: 229  DSRGSDHWPEHLGKFLRFHLYKENKDTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVSTQR 288

Query: 923  VTVFKQRASRLAALNERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKE 1102
            VTVFKQ ASRLAALN+RLIGIK+GDFC+VNEGL+LGQL GNRFT+TLRGVVA+SED IK 
Sbjct: 289  VTVFKQHASRLAALNDRLIGIKVGDFCYVNEGLLLGQLLGNRFTVTLRGVVADSEDTIKG 348

Query: 1103 SVNALTKQGFINYFGLQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGEKEAI---- 1270
            S ++L + GFINYFGLQRFGS SVPTHLIGA LLRGEWK AV +ILDPREG+   +    
Sbjct: 349  SADSLGRHGFINYFGLQRFGSGSVPTHLIGAALLRGEWKYAVSMILDPREGDILLLVICF 408

Query: 1271 ---RRVREYYKETGDIEGTLRQLPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYV 1441
               R  REYYKE+ DI+GTLRQLPR+L AE+A++QCL+K PGN+LQALKAIPRTLRMMYV
Sbjct: 409  MWMRMAREYYKESDDIDGTLRQLPRYLTAERAVLQCLKKCPGNYLQALKAIPRTLRMMYV 468

Query: 1442 HSYQSYLWNHAASMRIEKYGVDQVVLGDLVYWKEQCAGKEIGTAYSEREDGSSNDTQNPD 1621
            HSYQSYLWNHAASMR++KYG DQVV+GDLVY K     +EIG+A S  ED    D     
Sbjct: 469  HSYQSYLWNHAASMRVQKYGTDQVVVGDLVYCKGDDTEREIGSANSACEDDDCEDMYGCS 528

Query: 1622 HLDEISETDMPEETISFVK---AVTEEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYH 1792
            +LDE S TD+ E   + VK   AV  EDLS G Y ++DV+LP+PGSRV YP NDI +VYH
Sbjct: 529  NLDETSGTDLSERKDTLVKVEQAVNAEDLSTGNYTINDVILPMPGSRVSYPTNDIAKVYH 588

Query: 1793 DLAKKDSINLLESAHSIKEFSITSMTGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDV 1972
            DLA+KD+INL ES HS KEFSITSMTG YRRVFQK  DFEWE+L+Y DG  PLAETD + 
Sbjct: 589  DLAEKDAINLAESVHSAKEFSITSMTGSYRRVFQKPMDFEWEILSYTDGTTPLAETDMEK 648

Query: 1973 IVKSRSAE-QANLGNGKGRHEDAIDNEEQSVSFPGSLKDSSKDNEGGSDRTGFVQTEISD 2149
            + K++S E        K   +   D   Q +S    L  S++ N  G       + E   
Sbjct: 649  LAKAKSIELNKEEETKKNDTKSPSDCMRQPMSSGNDLHLSAEYNREGEREVEVAKVEPLY 708

Query: 2150 GSRSDNQETQTALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLN 2287
            G   + +  QTALKL+FTLPASCYATMAIRELLKTSTSVAFHKTLN
Sbjct: 709  G--PNTRGAQTALKLTFTLPASCYATMAIRELLKTSTSVAFHKTLN 752


>ref|XP_004302030.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform 1
            [Fragaria vesca subsp. vesca]
          Length = 701

 Score =  882 bits (2278), Expect = 0.0
 Identities = 453/687 (65%), Positives = 534/687 (77%), Gaps = 10/687 (1%)
 Frame = +2

Query: 236  ESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSLVAPPELVDEKEVKVSD 415
            ES+VGI CYIS LPGFRGILKQRYSDF+VNEVD+EG VV LT+L APPE+V E   K  D
Sbjct: 5    ESEVGIFCYISPLPGFRGILKQRYSDFMVNEVDMEGNVVHLTNLEAPPEVVKENGAKTED 64

Query: 416  EPNKSYDAEIQSFRAVAGDSDADMLKTFIDKIGPGVEVNIEPIVLSPSSDKSHRTAVHNF 595
              +K Y AEI+ FR +A   D + L+ FI ++  G E  + PIVLSP  DK HRTAVHNF
Sbjct: 65   AASKDYSAEIEKFRCLASGEDVERLEAFIREVNSGSEDGVMPIVLSPDYDKVHRTAVHNF 124

Query: 596  FKERLKFLVTDTVDGPDTTSKCIRVRLNMGNTHGRD-GSKKRKNRDDKPYDSRGSESWPE 772
            FKE LKFLVTD VDGPD +SKCIRVRLN G  +GR   SKKRK R DKP+DSRG + W E
Sbjct: 125  FKENLKFLVTDAVDGPDASSKCIRVRLNSGGQNGRGRNSKKRKERGDKPFDSRGVDDWSE 184

Query: 773  SLGKFLRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQRASR 952
             +GKFLRFHL KENKDTQEALGVIGKMLGIQPR+FGFAGTKDKR+V+ QRVTVFKQ ASR
Sbjct: 185  HVGKFLRFHLFKENKDTQEALGVIGKMLGIQPRAFGFAGTKDKRAVTCQRVTVFKQFASR 244

Query: 953  LAALNERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKESVNALTKQGF 1132
            LAALN+RLIGIK+GDFC+V EGL LGQL GNRFTITLRGVVA+SEDII+ S NAL KQGF
Sbjct: 245  LAALNDRLIGIKVGDFCYVKEGLSLGQLLGNRFTITLRGVVADSEDIIQASANALGKQGF 304

Query: 1133 INYFGLQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGEKEAIRRVREYYKETGDIE 1312
            +NYFGLQRFGS S+PTHLIGA+LLRGEWK+ V ++L+PREGE++ I   R+YYKE+ DI+
Sbjct: 305  VNYFGLQRFGSGSIPTHLIGASLLRGEWKSTVSMMLEPREGERDVITEARKYYKESNDID 364

Query: 1313 GTLRQLPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYLWNHAASMRIE 1492
            GTLR+LPR+LVAE+A++QCL+K PGN+ QALKA+PRTLRMMYVHSYQSYLWNHAASMR++
Sbjct: 365  GTLRKLPRYLVAERAVLQCLKKCPGNYSQALKAVPRTLRMMYVHSYQSYLWNHAASMRVQ 424

Query: 1493 KYGVDQVVLGDLVYWKEQCAGKEIGTAYSEREDGSSN-----DTQNPDHLDEISETDMPE 1657
            KYG D+VV+GDLVY K     K  G   SE  D + N     DT +P+HLD+ISET++PE
Sbjct: 425  KYGTDRVVVGDLVYCKGHETEKVTGIVSSECVDENVNDENCDDTFDPNHLDDISETNVPE 484

Query: 1658 ETISFVKAVTEEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSINLLESAH 1837
              +S VKAVT ED++ GTY +DD+VLPLPGSRVI+P+NDI  V+HDLAKKD I+L ES H
Sbjct: 485  ARVSLVKAVTAEDINNGTYTIDDIVLPLPGSRVIFPENDIAAVFHDLAKKDGISLTESVH 544

Query: 1838 SIKEFSITSMTGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSR----SAEQAN 2005
            ++KEFSIT++TG YRRVFQK  DFEW++L Y DGN+PL ETDF+ I K++    + E   
Sbjct: 545  NVKEFSITNVTGSYRRVFQKPVDFEWDILKYIDGNIPLVETDFEKIAKTKPVNVNKEYPT 604

Query: 2006 LGNGKGRHEDAIDNEEQSVSFPGSLKDSSKDNEGGSDRTGFVQTEISDGSRSDNQETQTA 2185
              +G G   D I   E SV+    ++   KDNE  S+       E   G     Q TQ A
Sbjct: 605  GVSGDGSLHDRIKQSECSVN---DVQLPKKDNEVESEGEKLPHVESLGGPIP--QGTQIA 659

Query: 2186 LKLSFTLPASCYATMAIRELLKTSTSV 2266
            LKLSFTLPASCYATMAIRELLKTSTSV
Sbjct: 660  LKLSFTLPASCYATMAIRELLKTSTSV 686


>ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana]
            gi|52354299|gb|AAU44470.1| hypothetical protein AT3G04820
            [Arabidopsis thaliana] gi|61742699|gb|AAX55170.1|
            hypothetical protein At3g04820 [Arabidopsis thaliana]
            gi|332640619|gb|AEE74140.1| pseudouridine synthase
            [Arabidopsis thaliana]
          Length = 715

 Score =  867 bits (2240), Expect = 0.0
 Identities = 442/697 (63%), Positives = 539/697 (77%), Gaps = 8/697 (1%)
 Frame = +2

Query: 221  MKSLDESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSLVAPPELV--DE 394
            MK++DE+DVGI C+IS+LPGFRGILKQRY+DFIVNEVD++G VV LTSL  PPE+   +E
Sbjct: 37   MKTVDEADVGISCFISQLPGFRGILKQRYADFIVNEVDMDGNVVHLTSLDLPPEMAVKEE 96

Query: 395  KEVKVSDEPNKSYDAEIQSFRAVAGDSDADMLKTFIDKIGPGVEVNIEPIVLSPSSDKSH 574
             + K  D   ++Y + ++SF++++  +DA+ L+  I+++  G +  + P+VL PSSDKS 
Sbjct: 97   DKAKSCDNVPQNYTSAVESFKSISSVTDAERLEILINQVTSGTDGEVLPVVLDPSSDKSK 156

Query: 575  RTAVHNFFKERLKFLVTDTVDGPDTTSKCIRVRLNMGNTHGRDG-SKKRKNRDDKPYDSR 751
            RTA+HNF KE  KFLVTDTVDGPD+TSKCIRVR+N G  + R   SKKRK R DKP+DSR
Sbjct: 157  RTAIHNFVKENFKFLVTDTVDGPDSTSKCIRVRVNSGANNNRGNRSKKRKERGDKPFDSR 216

Query: 752  GSESWPESLGKFLRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQRVTV 931
            GSE WPE +GKFLRFHL+KENKDTQEALG+IGKMLG+QP+SFGF+GTKDKRSVSTQRVTV
Sbjct: 217  GSEHWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGVQPKSFGFSGTKDKRSVSTQRVTV 276

Query: 932  FKQRASRLAALNERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKESVN 1111
            FKQ+AS+LAALN+RL GIK+GDFC+V EGL+LGQL GNRFTITLRGVVA+SE+ IK+S  
Sbjct: 277  FKQQASKLAALNKRLFGIKVGDFCNVKEGLLLGQLMGNRFTITLRGVVADSEETIKQSAE 336

Query: 1112 ALTKQGFINYFGLQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGEKEAIRRVREYY 1291
            +L K GFINYFGLQRFGS SVPTH +GA LL+GEWK AVD+ILDPRE E+  +   REYY
Sbjct: 337  SLGKDGFINYFGLQRFGSGSVPTHHVGAALLKGEWKDAVDMILDPRETERHVVNDAREYY 396

Query: 1292 KETGDIEGTLRQLPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYLWNH 1471
            KETGDI+GTLRQLPR+LVAE+AI+QCL+K PGN+LQALK IPRTLRMMYVHSYQSYLWN+
Sbjct: 397  KETGDIDGTLRQLPRYLVAERAILQCLKKCPGNYLQALKGIPRTLRMMYVHSYQSYLWNN 456

Query: 1472 AASMRIEKYGVDQVVLGDLVYWKEQCAGKEIGTAYSEREDGSSNDTQNPDHLDEISETDM 1651
            AAS+R++ YG  QVVLGDLV  K   A + + +  SE  + SS +  + D +D+ +  D+
Sbjct: 457  AASLRVKNYGTSQVVLGDLVSTKVDAAKRMVDSLTSEHNE-SSEEALDCDQVDDTAVVDL 515

Query: 1652 PEETISFVKAVTEEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSINLLES 1831
            P E    VK V+ EDL AGTY+  D+VLPLPGSRVIYP NDI E+YHDLAKKD I+L ES
Sbjct: 516  PAERSDLVKVVSIEDLEAGTYSTSDIVLPLPGSRVIYPSNDIAEIYHDLAKKDGISLTES 575

Query: 1832 AHSIKEFSITSMTGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSRSAEQANLG 2011
             H +KEFSITSMTGGYRRVFQK  DFEWE+LTY D N PLAETD D I  ++  E+    
Sbjct: 576  IHGVKEFSITSMTGGYRRVFQKPIDFEWELLTYTDSNKPLAETDLDRIPMNKPVEKV--- 632

Query: 2012 NGKGRHEDAIDNEEQSVSFP-----GSLKDSSKDNEGGSDRTGFVQTEISDGSRSDNQET 2176
               G  E+  D   +S + P      +LKD +  NE   D TG            D+++T
Sbjct: 633  ---GSTEEIEDESMKSDTNPHDSGETNLKDQTDSNEAEKD-TG----------NPDSEQT 678

Query: 2177 QTALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLN 2287
            Q ALK++ TLP+SCYATMAIRELLKTSTSVA+HKTLN
Sbjct: 679  QMALKMALTLPSSCYATMAIRELLKTSTSVAYHKTLN 715


>ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C1A4.09-like [Cucumis
            sativus]
          Length = 719

 Score =  864 bits (2233), Expect = 0.0
 Identities = 448/698 (64%), Positives = 550/698 (78%), Gaps = 10/698 (1%)
 Frame = +2

Query: 224  KSLDESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSLVAPPE-LVDEKE 400
            KS+ ESDVGIL YIS LPGFRGILKQRYSDFIVNEVD +G VV LTSL APPE +V E  
Sbjct: 41   KSVGESDVGILSYISSLPGFRGILKQRYSDFIVNEVDTDGNVVHLTSLDAPPEVIVSESG 100

Query: 401  VKVSDEPNKSYDAEIQSFRAVAGDSDADMLKTFIDKIGPGVEVNIEPIVLSPSSDKSHRT 580
              +    ++SY +EI+ FR++AGDSDA++L+ F+ +I  GV  +I PIV SP +DK+HRT
Sbjct: 101  PTIVHSTSQSYASEIELFRSLAGDSDAEILEIFLKQINSGVNDDILPIVFSPDTDKTHRT 160

Query: 581  AVHNFFKERLKFLVTDTVDGPDTTSKCIRVRLNMG--NTHGRDGSKKRKNRDDKPYDSRG 754
            AVHNFFK + KFLVTDT+DGPD++SKC+RVR++ G  N  GR  SKKRK R DKP+DSRG
Sbjct: 161  AVHNFFK-KFKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRF-SKKRKERGDKPFDSRG 218

Query: 755  SESWPESLGKFLRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVF 934
            S++WPE +GKFLRFHL+KENKDTQEALG+IGKMLGIQ RSFGFAGTKDKRS+STQRVTVF
Sbjct: 219  SDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVF 278

Query: 935  KQRASRLAALNERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKESVNA 1114
            KQ ASR+AALN+RLIGIKLG+F ++ EGL+LGQL GNRFTITLRGVVA SED+IK S  A
Sbjct: 279  KQHASRIAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVANSEDVIKASAEA 338

Query: 1115 LTKQGFINYFGLQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGEKEAIRRVREYYK 1294
            L + GFINYFGLQRFGS SVPTHL+GA+LLRGEWK AV++ILDPREG+   + R R+YYK
Sbjct: 339  LGRHGFINYFGLQRFGSGSVPTHLVGASLLRGEWKGAVNMILDPREGDILLLMRARDYYK 398

Query: 1295 ETGDIEGTLRQLPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYLWNHA 1474
            E+ DI+GTL+QLPR+LVAE+AI+QCL+K PGN+LQALKAIPRTLRMMYVHSYQSYLWNHA
Sbjct: 399  ESDDIDGTLKQLPRYLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHA 458

Query: 1475 ASMRIEKYGVDQVVLGDLVYWKE---QCAGKEIGTAYSEREDGSSNDTQNPDHLDEISET 1645
            ASMR++KYG+D+VV+GDLVY KE   + A  +    Y + + G +N + +  HL+E+ + 
Sbjct: 459  ASMRVQKYGIDKVVVGDLVYCKENHTETAAVQNSEEYEDEDCGDAN-SYDSCHLEEVCKL 517

Query: 1646 DMPEETISFVKAVTEEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSINLL 1825
             +P E    VKAVT  D+ +G + +DDVVLPLPGSRV+YP NDI EVY+DLA KDSI+L 
Sbjct: 518  GLPTERHKLVKAVTAGDVLSGNFTIDDVVLPLPGSRVLYPTNDIAEVYNDLATKDSISLT 577

Query: 1826 ESAHSIKEFSITSMTGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSRSAEQAN 2005
             S H++KEFSITSMTG YRRVFQ+ KD+EWE+++Y D N+PLA++D   ++KS+S E + 
Sbjct: 578  NSVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHNLLKSQSVEISK 637

Query: 2006 LGN--GKGRHEDAIDNEEQSVSFPGS--LKDSSKDNEGGSDRTGFVQTEISDGSRSDNQE 2173
                  K ++ED++D+ +QSV    +  L+   K+NE G                   Q+
Sbjct: 638  EEKIADKSKNEDSLDSTDQSVCCKKNIQLEAGGKENENG----------------QGTQD 681

Query: 2174 TQTALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLN 2287
             Q ALKLSFTLPAS YATMAIRELLKTSTSVAFHKTLN
Sbjct: 682  PQMALKLSFTLPASSYATMAIRELLKTSTSVAFHKTLN 719


>ref|XP_006577278.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Glycine max]
          Length = 690

 Score =  834 bits (2155), Expect = 0.0
 Identities = 436/697 (62%), Positives = 527/697 (75%), Gaps = 8/697 (1%)
 Frame = +2

Query: 221  MKSLDESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSLVAP---PELVD 391
            MK+ +E +VGI C+IS LPGFRGILKQRYSDFIVNEVD +G VV+L+SL AP   PE   
Sbjct: 3    MKTAEEHEVGISCFISDLPGFRGILKQRYSDFIVNEVDRDGTVVQLSSLDAPQEEPESSQ 62

Query: 392  EKEVKVSDEPNKSYDAEIQSFRAVAGDSDADMLKTFIDKIGPGVEVNIEPIVLSPSSDKS 571
            E     SD    SY ++I+SF+++AGDSDA +L+ FI+KI  G E  + PIVLSP SDKS
Sbjct: 63   ENGTNTSDNV-VSYASQIESFKSLAGDSDAVLLEEFINKINAGGEDGVSPIVLSPDSDKS 121

Query: 572  HRTAVHNFFKERLKFLVTDTVDGPDTTSKCIRVRLNMGNTHGRD-GSKKRKNRDDKPYDS 748
            HR A+HNFFKE  KFLVTD VDGPD +SKCIRVRLN    + +   SKKRK R DKP+DS
Sbjct: 122  HRKAMHNFFKENFKFLVTDVVDGPDASSKCIRVRLNSAEPNNKGKNSKKRKERGDKPFDS 181

Query: 749  RGSESWPESLGKFLRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQRVT 928
            RGSE+WP+++GKFLRFHL+KENKDT EALGVIG ML +QP+SFGFAGTKDKR+V+TQRVT
Sbjct: 182  RGSENWPKNVGKFLRFHLYKENKDTHEALGVIGNMLSVQPKSFGFAGTKDKRAVTTQRVT 241

Query: 929  VFKQRASRLAALNERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKESV 1108
            V+KQRASRLA+LN+RL GIKLGDFC+V EGL LGQL GNRFTITLRG+VA+SEDIIK S 
Sbjct: 242  VYKQRASRLASLNKRLFGIKLGDFCYVKEGLCLGQLLGNRFTITLRGIVADSEDIIKASA 301

Query: 1109 NALTKQGFINYFGLQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGEKEAIRRVREY 1288
            +AL + GFINYFGLQRFGS S+PTHLIGA LL+GEWK AVD+ILDPR+GEK AI + R+Y
Sbjct: 302  DALGRHGFINYFGLQRFGSGSLPTHLIGAALLQGEWKLAVDMILDPRDGEKSAIAKARKY 361

Query: 1289 YKETGDIEGTLRQLPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYLWN 1468
            YKE+ D+ GTL+QLPR+LVAE+A++Q L+ SPGN+LQALK+IPRTLRM+YVHSYQSYLWN
Sbjct: 362  YKESSDVVGTLKQLPRYLVAERAVLQTLKTSPGNYLQALKSIPRTLRMLYVHSYQSYLWN 421

Query: 1469 HAASMRIEKYGVDQVVLGDLVYWKEQCAGK---EIGTAYSEREDGSSNDTQNPDHLDEIS 1639
            HAAS R++KYG + VVLGDLVY KE   GK    +G+ Y+E   G  +     +   EI 
Sbjct: 422  HAASKRVQKYGTENVVLGDLVYCKENSTGKVTESVGSEYAEDCSGRYDSNNEDEISGEI- 480

Query: 1640 ETDMPEETISFVKAVTEEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSIN 1819
                  E I  VK V  EDL++G Y +DDV+LP+PGSR+ YP N I  VY DLAKKD I+
Sbjct: 481  -----HEEIDSVKVVDVEDLNSGYYTIDDVILPMPGSRIKYPTNHIANVYEDLAKKDGIS 535

Query: 1820 LLESAHSIKEFSITSMTGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSR-SAE 1996
            L ES H++++FSITS+TG YRRVFQK  +FEWE+LTY D N  L ETD D + KS+    
Sbjct: 536  LTESVHNVEDFSITSITGCYRRVFQKPINFEWELLTYSDSNKQLVETDLDKVNKSKPMGT 595

Query: 1997 QANLGNGKGRHEDAIDNEEQSVSFPGSLKDSSKDNEGGSDRTGFVQTEISDGSRSDNQET 2176
               +G   G++E+A D   +  S    +K  +     G +       E   GS S  Q++
Sbjct: 596  VKQMGAANGKNEEAFDCIRELESSNDVVKVENYSEIAG-EEIKLPHDESLSGSSS--QDS 652

Query: 2177 QTALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLN 2287
            Q ALKLSFTLPASCYATMAIRELLKTSTSVA+HKTLN
Sbjct: 653  QIALKLSFTLPASCYATMAIRELLKTSTSVAYHKTLN 689


>ref|XP_002884472.1| pseudouridylate synthase [Arabidopsis lyrata subsp. lyrata]
            gi|297330312|gb|EFH60731.1| pseudouridylate synthase
            [Arabidopsis lyrata subsp. lyrata]
          Length = 710

 Score =  833 bits (2152), Expect = 0.0
 Identities = 431/694 (62%), Positives = 526/694 (75%), Gaps = 5/694 (0%)
 Frame = +2

Query: 221  MKSLDESDVGILCYISRLPGFRGILKQR-YSDFIVNEVDLEGKVVRLTSLVAPPEL--VD 391
            M ++DE+DVGI C+IS+LPGFRGILKQR Y+DFIVNEVD++G VV LTSL  PPE+   +
Sbjct: 37   MTTVDEADVGISCFISQLPGFRGILKQRSYADFIVNEVDIDGNVVHLTSLDLPPEMDVKE 96

Query: 392  EKEVKVSDEPNKSYDAEIQSFRAVAGDSDADMLKTFIDKIGPGVEVNIEPIVLSPSSDKS 571
            E + K SD   ++Y + I+SFR+++  +DA+ L+T I+++  G +  I P+VL PSSDKS
Sbjct: 97   EDKTKTSDNVPQNYTSAIESFRSISSVTDAERLETLINQVTSGTDDEISPVVLDPSSDKS 156

Query: 572  HRTAVHNFFKERLKFLVTDTVDGPDTTSKCIRVRLNMGNTHGRDG-SKKRKNRDDKPYDS 748
             RTA+HNF KE  KFLVTDTVDGPD+TSKCIRVR+N G  + R   SKKRK R DKP+DS
Sbjct: 157  KRTAIHNFVKENFKFLVTDTVDGPDSTSKCIRVRVNSGAHNNRGNRSKKRKERGDKPFDS 216

Query: 749  RGSESWPESLGKFLRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQRVT 928
            RGSE WPE +GKFLRFHL+KENKDTQEALG+IGKMLG+QP+SFGF+GTKDKRSVSTQRVT
Sbjct: 217  RGSEHWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGVQPKSFGFSGTKDKRSVSTQRVT 276

Query: 929  VFKQRASRLAALNERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKESV 1108
            VFKQ+AS+LAALN+RL GIK+GDFCHV EGL+LGQL GNRFTITLRGVVA+SE+ IK+S 
Sbjct: 277  VFKQQASKLAALNKRLFGIKVGDFCHVKEGLLLGQLMGNRFTITLRGVVADSEETIKKSA 336

Query: 1109 NALTKQGFINYFGLQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGEKEAIRRVREY 1288
             +L K GFINYFGLQRFGS SVPTH +GA LL+GEWK A              +   REY
Sbjct: 337  ESLGKDGFINYFGLQRFGSGSVPTHHVGAALLKGEWKDA------ECSNAWHVVNDAREY 390

Query: 1289 YKETGDIEGTLRQLPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYLWN 1468
            YKETGDI+GTLRQLPR+LVAE+AI+QCL+K PGN+LQALK IPRTLRMMYVHSYQSYLWN
Sbjct: 391  YKETGDIDGTLRQLPRYLVAERAILQCLKKCPGNYLQALKGIPRTLRMMYVHSYQSYLWN 450

Query: 1469 HAASMRIEKYGVDQVVLGDLVYWKEQCAGKEIGTAYSEREDGSSNDTQNPDHLDEISETD 1648
            +AAS+R+ KYG  QVVLGDLV  K     + + +  SE  + SS +  + D +D+ +  D
Sbjct: 451  NAASLRVTKYGTSQVVLGDLVSTKVDAEKRMVDSLTSEHNE-SSEEALDCDQVDDTAVVD 509

Query: 1649 MPEETISFVKAVTEEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSINLLE 1828
            +P E    VK V+ EDL AGTY   D+VLPLPGSRVIYP NDI E+YHDLAKKD I+L E
Sbjct: 510  LPAERSDLVKVVSIEDLEAGTYLTSDIVLPLPGSRVIYPSNDIAEIYHDLAKKDGISLTE 569

Query: 1829 SAHSIKEFSITSMTGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSRSAEQANL 2008
            S H +KEFSITSMTGGYRRVFQK  DFEWE+LTY D N PLAETD D I   +  ++  +
Sbjct: 570  SIHGVKEFSITSMTGGYRRVFQKPIDFEWELLTYTDSNKPLAETDLDRITVYKPVDK--V 627

Query: 2009 GNGKGRHEDAIDNE-EQSVSFPGSLKDSSKDNEGGSDRTGFVQTEISDGSRSDNQETQTA 2185
            G+ +   ++ + ++     S   +LKD +   E           +  D    D+++TQ A
Sbjct: 628  GSAEEIEDEPLKSDTNPHESCETNLKDQTDSKE-----------DEKDTRNPDSEQTQMA 676

Query: 2186 LKLSFTLPASCYATMAIRELLKTSTSVAFHKTLN 2287
            LK++ TLP+SCYATMAIRELLKTSTSVA+HKTLN
Sbjct: 677  LKMALTLPSSCYATMAIRELLKTSTSVAYHKTLN 710


>ref|XP_006300094.1| hypothetical protein CARUB_v10016322mg [Capsella rubella]
            gi|482568803|gb|EOA32992.1| hypothetical protein
            CARUB_v10016322mg [Capsella rubella]
          Length = 704

 Score =  831 bits (2146), Expect = 0.0
 Identities = 432/692 (62%), Positives = 521/692 (75%), Gaps = 3/692 (0%)
 Frame = +2

Query: 221  MKSLDESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSLVAPPEL--VDE 394
            MK++DE+DVGI C+IS+LPGFRGILKQRY+DFIVNEVD+ G VV LTSL  PPE+   +E
Sbjct: 39   MKTVDEADVGISCFISQLPGFRGILKQRYADFIVNEVDINGNVVHLTSLDLPPEMDVKEE 98

Query: 395  KEVKVSDEPNKSYDAEIQSFRAVAGDSDADMLKTFIDKIGPGVEVNIEPIVLSPSSDKSH 574
             + K SD   ++Y + I+SF++++  +DA+ L+T I+++  G +  I P+VL PSSDKS 
Sbjct: 99   DKTKSSDNVPQNYTSAIESFKSISNATDAERLETLINQVTSGTDDEISPVVLDPSSDKSK 158

Query: 575  RTAVHNFFKERLKFLVTDTVDGPDTTSKCIRVRLNMGNTHGRDG-SKKRKNRDDKPYDSR 751
            RTA+HNF KE  KFLVTDTVDGPD+TSKCIRVR+N G  + R   SKKRK R DKP+DSR
Sbjct: 159  RTAIHNFVKENFKFLVTDTVDGPDSTSKCIRVRVNSGAHNNRGNRSKKRKERGDKPFDSR 218

Query: 752  GSESWPESLGKFLRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQRVTV 931
            GSE WPE +GKFLRFHL+KENKDTQEALG+IGKMLG+QP+SFGF+GTKDKRSVSTQ VTV
Sbjct: 219  GSEHWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGVQPKSFGFSGTKDKRSVSTQCVTV 278

Query: 932  FKQRASRLAALNERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKESVN 1111
            FKQ+AS+LAALN+RL GIK+GDFCHV EGL+LGQL GNRFTITLRGVVA+SE+ IK+S  
Sbjct: 279  FKQQASKLAALNKRLFGIKVGDFCHVKEGLLLGQLMGNRFTITLRGVVADSEETIKKSAE 338

Query: 1112 ALTKQGFINYFGLQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGEKEAIRRVREYY 1291
            +L K GFINYFGLQRFGS SVPTH +GA LL+GEWK A       R      +   REYY
Sbjct: 339  SLGKDGFINYFGLQRFGSGSVPTHHVGAALLKGEWKDA------ERINAWHVVNDAREYY 392

Query: 1292 KETGDIEGTLRQLPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYLWNH 1471
            KETGDI+GTLRQLPR+LVAE+AI+QCL+K PGN+LQALK IPRTLRMMYVHSYQSYLWN+
Sbjct: 393  KETGDIDGTLRQLPRYLVAERAILQCLKKCPGNYLQALKGIPRTLRMMYVHSYQSYLWNN 452

Query: 1472 AASMRIEKYGVDQVVLGDLVYWKEQCAGKEIGTAYSEREDGSSNDTQNPDHLDEISETDM 1651
            AAS+R++KYG  QVVLGDLV  K     K   T  SE ++ ++ D  + D +D+ +  D+
Sbjct: 453  AASLRVKKYGTSQVVLGDLVSTKIDATKKMADT--SEHKE-NNEDALDCDQVDDTAIVDL 509

Query: 1652 PEETISFVKAVTEEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSINLLES 1831
            P E    VK V+ EDL AGTY+  D+VLPLPGSRVIYP NDI E+YHDLAKKD I+L +S
Sbjct: 510  PAERSDLVKVVSVEDLEAGTYSTSDIVLPLPGSRVIYPSNDIAEIYHDLAKKDGISLTDS 569

Query: 1832 AHSIKEFSITSMTGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKSRSAEQANLG 2011
             H +KEFSITSMTGGYRRVFQK  DFEWE+LTY D N PLAETD D I  +         
Sbjct: 570  IHGVKEFSITSMTGGYRRVFQKPIDFEWELLTYTDSNKPLAETDLDRITMT--------V 621

Query: 2012 NGKGRHEDAIDNEEQSVSFPGSLKDSSKDNEGGSDRTGFVQTEISDGSRSDNQETQTALK 2191
            +  G  E+  D     +S P    D +   E   D          D    ++++TQ ALK
Sbjct: 622  DKVGSAEEVEDESMNPISNPPE-TDLNDQTERKDDE--------KDTGNPNSEQTQMALK 672

Query: 2192 LSFTLPASCYATMAIRELLKTSTSVAFHKTLN 2287
            ++ TLP+SCYATMAIRELLKTSTSVA+HKTLN
Sbjct: 673  MALTLPSSCYATMAIRELLKTSTSVAYHKTLN 704


>gb|ESW19147.1| hypothetical protein PHAVU_006G100200g [Phaseolus vulgaris]
          Length = 691

 Score =  829 bits (2142), Expect = 0.0
 Identities = 438/700 (62%), Positives = 532/700 (76%), Gaps = 11/700 (1%)
 Frame = +2

Query: 221  MKSLDESDVGILCYISRLPGFRGILKQRYSDFIVNEVDLEGKVVRLTSLVAPPE---LVD 391
            MK+++E +VGI C+IS LPGFRGILKQRYSDFIVNEVD +G VV+L+SL AP E    V 
Sbjct: 3    MKTVEEDEVGISCFISDLPGFRGILKQRYSDFIVNEVDRDGAVVQLSSLDAPEEELESVQ 62

Query: 392  EKEVKVSDEPNKSYDAEIQSFRAVAGDSDADMLKTFIDKIGPGVEVNIEPIVLSPSSDKS 571
            E     SD    SY + I++F+ +AG+ DA +L+ F++KI  G EV++ PIVLSP SDKS
Sbjct: 63   ENGTNTSDTV-VSYASRIEAFKILAGEPDAILLEEFVNKINAGGEVSVSPIVLSPDSDKS 121

Query: 572  HRTAVHNFFKERLKFLVTDTVDGPDTTSKCIRVRLNMGNTHGRD-GSKKRKNRDDKPYDS 748
            HR AVHNFFKE  KFLVTD VDGPD + KCIRVRLN    + +   SKKRK R DKP+DS
Sbjct: 122  HRKAVHNFFKENFKFLVTDVVDGPDASLKCIRVRLNSAEPNNKGKNSKKRKERGDKPFDS 181

Query: 749  RGSESWPESLGKFLRFHLHKENKDTQEALGVIGKMLGIQPRSFGFAGTKDKRSVSTQRVT 928
            RGSE+WPE++GKFLRFH++KENKDT EALGVIG MLGIQP+SFGFAGTKDKR+V+TQRVT
Sbjct: 182  RGSENWPENVGKFLRFHIYKENKDTHEALGVIGNMLGIQPKSFGFAGTKDKRAVTTQRVT 241

Query: 929  VFKQRASRLAALNERLIGIKLGDFCHVNEGLVLGQLHGNRFTITLRGVVAESEDIIKESV 1108
            V+KQRASRLA+LN+RL GIKLGDFC+V EGL LGQL GNRFTITLRG+V++SEDIIK S 
Sbjct: 242  VYKQRASRLASLNKRLFGIKLGDFCYVKEGLCLGQLMGNRFTITLRGIVSDSEDIIKASA 301

Query: 1109 NALTKQGFINYFGLQRFGSSSVPTHLIGATLLRGEWKAAVDLILDPREGEKEAIRRVREY 1288
            +AL + GFINYFGLQRFGS S+PTHLIGA LLRGEWK AVD+ILDPREGE+ AI + R+Y
Sbjct: 302  DALGRLGFINYFGLQRFGSGSLPTHLIGAALLRGEWKLAVDMILDPREGERSAIAKARKY 361

Query: 1289 YKETGDIEGTLRQLPRHLVAEKAIMQCLRKSPGNHLQALKAIPRTLRMMYVHSYQSYLWN 1468
            YKE  D+ GTL+QLPR+LVAE+A++Q L+ SPGN+LQALK+IPRTLR++Y+HSYQSYLWN
Sbjct: 362  YKENNDVVGTLKQLPRYLVAERAVLQSLKTSPGNYLQALKSIPRTLRLLYIHSYQSYLWN 421

Query: 1469 HAASMRIEKYGVDQVVLGDLVYWKEQCAGK---EIGTAYSEREDGSSNDTQNPDHLDEIS 1639
            HAAS R++KYG +QVVLGDLV  KE    K    +G+ Y E   G  + +      +EIS
Sbjct: 422  HAASKRVQKYGTEQVVLGDLVNCKENSTAKITEFVGSEYPEDCSGGYDSSNQ----NEIS 477

Query: 1640 ETDMPEETISFVKAVTEEDLSAGTYNVDDVVLPLPGSRVIYPKNDIGEVYHDLAKKDSIN 1819
              D+ E+  S VK V  EDL++G Y +DDV+LP+PGSRV YP N I  VY DLAKKD I+
Sbjct: 478  -VDIHEDINSCVKVVDAEDLNSGCYTIDDVILPMPGSRVKYPTNHIANVYEDLAKKDGIS 536

Query: 1820 LLESAHSIKEFSITSMTGGYRRVFQKLKDFEWEMLTYRDGNVPLAETDFDVIVKS---RS 1990
            L ES H+++EFSITS+TG YRRVFQK  +FEWE+LTY D N  L ETD + I KS    +
Sbjct: 537  LTESVHNVEEFSITSITGCYRRVFQKPINFEWELLTYSDSNKQLVETDLEKINKSAPTNT 596

Query: 1991 AEQANLGNGKGRHE-DAIDNEEQSVSFPGSLKDSSKDNEGGSDRTGFVQTEISDGSRSDN 2167
             +  ++GNGK     D I   E S  FP    ++ KD  G   +    ++       S +
Sbjct: 597  VKPIDVGNGKTEEAFDCIREFESSDDFP--KVENFKDIAGEEVKLPHGESLCD----SSS 650

Query: 2168 QETQTALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLN 2287
            Q++ TALKLSFTLPASCYATMAIRELLKTSTSVA+HKTLN
Sbjct: 651  QDSHTALKLSFTLPASCYATMAIRELLKTSTSVAYHKTLN 690