BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00012663
         (1157 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF,...   237   6e-60
ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF,...   237   8e-60
emb|CBI32760.3| unnamed protein product [Vitis vinifera]              236   1e-59
ref|XP_006354351.1| PREDICTED: RNA polymerase sigma factor sigF,...   235   2e-59
ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD ...   231   3e-58
ref|XP_004246643.1| PREDICTED: RNA polymerase sigma factor sigF,...   229   1e-57
ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF,...   228   3e-57
gb|EOY07878.1| RNA polymerase sigma factor rpoD, putative [Theob...   225   2e-56
gb|EMJ06193.1| hypothetical protein PRUPE_ppa003513mg [Prunus pe...   221   3e-55
ref|XP_006428731.1| hypothetical protein CICLE_v10011376mg [Citr...   219   1e-54
ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [...   218   4e-54
ref|XP_002326192.1| predicted protein [Populus trichocarpa]           212   3e-52
gb|EXC16188.1| RNA polymerase sigma factor rpoD [Morus notabilis]     211   3e-52
ref|XP_006381426.1| RNA POLYMERASE SIGMA-70 FACTOR family protei...   211   3e-52
ref|XP_006428732.1| hypothetical protein CICLE_v10011376mg [Citr...   211   6e-52
ref|XP_006428730.1| hypothetical protein CICLE_v10011376mg [Citr...   204   4e-50
ref|XP_004304450.1| PREDICTED: RNA polymerase sigma factor sigF,...   196   2e-47
ref|XP_006588793.1| PREDICTED: RNA polymerase sigma factor sigF,...   192   2e-46
gb|ESW16353.1| hypothetical protein PHAVU_007G149600g [Phaseolus...   186   2e-44
ref|XP_003542550.1| PREDICTED: RNA polymerase sigma factor sigF,...   185   3e-44

>ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            isoform X2 [Citrus sinensis]
          Length = 569

 Score =  237 bits (605), Expect = 6e-60
 Identities = 149/340 (43%), Positives = 208/340 (61%), Gaps = 17/340 (5%)
 Frame = +3

Query: 144  MEAARNFLVSPPLIPSS---RTHLRNCSFTSSSPSVLTLHEQAAPALNNTPTAYLARHFP 314
            MEA RN L SPP  PS    +  L + + +SSS SVL  +EQ+APA+ + PT+ +ARHFP
Sbjct: 1    MEAGRNLLSSPPSFPSRTRVKHSLSSSASSSSSSSVLMHNEQSAPAVASVPTSSVARHFP 60

Query: 315  TSVHIQDHHDEALSTLLLSKDQRTSQATLDRRLINATAXXXXXXXXXXXXXXXKS-RIQL 491
            TSV +Q+  DE    L + K+ +TSQAT D R +   A               +    Q 
Sbjct: 61   TSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKNSGDLDQLVQDLEHQF 120

Query: 492  LHMPGLWYLFRSLE---------AIQSVPMEAEKFSNVEAKSVIVLAKKALSASREATLL 644
            LH P LW L   ++          +QS+  + E+  + E    + LA+KALSAS+EA  L
Sbjct: 121  LHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAASL 180

Query: 645  AEQSKLSGNNL-DVALSPSPLTSESADIHLEVVKTVKSTRLLERRSKRRGAKTKFVVPER 821
            AE  KL+G    D++L+       S    LE VKTV+ST+ LERRSK+R      V    
Sbjct: 181  AENPKLNGAEFTDISLT------SSLGYPLEEVKTVRSTQFLERRSKKRKVSKPKVTNHE 234

Query: 822  NY-SGKLHLQRKITEAFDKNDALRIFT-GPET-KLLTANEESDLIMKIQEYLKLEEVKNK 992
             Y S K  +++K++E FD+ND LR+F  GPET KLLTA+EE +LI +IQ+ ++LE+ K+K
Sbjct: 235  TYNSRKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFELIAQIQDLIRLEKEKSK 294

Query: 993  LQNEFGHEPSLVEWGEAVGLSCRDLQSQLYSGKLSREKLL 1112
            LQ++FG EP+L+EW +A+GLSCRDL+S+L+SG  SREKL+
Sbjct: 295  LQSQFGREPTLIEWAKAIGLSCRDLKSELHSGNSSREKLI 334


>ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            isoform X1 [Citrus sinensis]
          Length = 570

 Score =  237 bits (604), Expect = 8e-60
 Identities = 150/342 (43%), Positives = 210/342 (61%), Gaps = 19/342 (5%)
 Frame = +3

Query: 144  MEAARNFLVSPPLIPSSRTHLRN-----CSFTSSSPSVLTLHEQAAPALNNTPTAYLARH 308
            MEA RN L SPP  PS RT +++      S +SSS +VL  +EQ+APA+ + PT+ +ARH
Sbjct: 1    MEAGRNLLSSPPSFPS-RTRVKHSLSSSASSSSSSSAVLMHNEQSAPAVASVPTSSVARH 59

Query: 309  FPTSVHIQDHHDEALSTLLLSKDQRTSQATLDRRLINATAXXXXXXXXXXXXXXXKS-RI 485
            FPTSV +Q+  DE    L + K+ +TSQAT D R +   A               +    
Sbjct: 60   FPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKNSGDLDQLVQDLEH 119

Query: 486  QLLHMPGLWYLFRSLE---------AIQSVPMEAEKFSNVEAKSVIVLAKKALSASREAT 638
            Q LH P LW L   ++          +QS+  + E+  + E    + LA+KALSAS+EA 
Sbjct: 120  QFLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAA 179

Query: 639  LLAEQSKLSGNNL-DVALSPSPLTSESADIHLEVVKTVKSTRLLERRSKRRGAKTKFVVP 815
             LAE  KL+G    D++L+       S    LE VKTV+ST+ LERRSK+R      V  
Sbjct: 180  SLAENPKLNGAEFTDISLT------SSLGYPLEEVKTVRSTQFLERRSKKRKVSKPKVTN 233

Query: 816  ERNY-SGKLHLQRKITEAFDKNDALRIFT-GPET-KLLTANEESDLIMKIQEYLKLEEVK 986
               Y S K  +++K++E FD+ND LR+F  GPET KLLTA+EE +LI +IQ+ ++LE+ K
Sbjct: 234  HETYNSRKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFELIAQIQDLIRLEKEK 293

Query: 987  NKLQNEFGHEPSLVEWGEAVGLSCRDLQSQLYSGKLSREKLL 1112
            +KLQ++FG EP+L+EW +A+GLSCRDL+S+L+SG  SREKL+
Sbjct: 294  SKLQSQFGREPTLIEWAKAIGLSCRDLKSELHSGNSSREKLI 335


>emb|CBI32760.3| unnamed protein product [Vitis vinifera]
          Length = 561

 Score =  236 bits (603), Expect = 1e-59
 Identities = 155/335 (46%), Positives = 201/335 (60%), Gaps = 12/335 (3%)
 Frame = +3

Query: 144  MEAARNFLVSPPLIPSSRTHLRNCSFTSSSPSVLTLHEQAAPALNNTPTAYLARHFPTSV 323
            MEA  N L S P  P  RTH RN     SS SVL LH+Q APA+ + PT  +AR FPTSV
Sbjct: 1    MEAGTNILSSTPSFPP-RTHFRN-----SSSSVLMLHDQVAPAVASIPTT-IARKFPTSV 53

Query: 324  HIQDHHDEALSTLLLSKDQRTSQATLDRRLINATAXXXXXXXXXXXXXXXKSRIQLLHMP 503
             +Q+  DE        KD+RT QATL++R +                       QLL  P
Sbjct: 54   LLQEQRDEYRPFPQALKDERTFQATLEKRQMEIVVSADEENSDDHNQYMVNFERQLLLQP 113

Query: 504  GLWYLFRSLEA----------IQSVPMEAEKFSNVEAKSVIVLAKKALSASREATLLAEQ 653
            GLWY   S +           ++S+  + E   +V+   V+ LAKKALSAS++A  L E 
Sbjct: 114  GLWYSLPSSQTGEKSPFSSSIMKSITTDIENSMDVKPCDVLALAKKALSASKQAVSLYEN 173

Query: 654  SKLSGNNLDVALSPSPLTSESADIHLEVVKTVKSTRLLERRSKRRGAKTKFVVPERNYSG 833
            +KL G +L+ + SPS     S ++ LE  KTV+STRLLERRSK+R    K  V E + S 
Sbjct: 174  AKLLGADLEDSPSPSLGAISSPNLPLEE-KTVRSTRLLERRSKKR-RNPKVAVHENHGSR 231

Query: 834  KLHLQRKITEAFDKNDALRIFT-GPET-KLLTANEESDLIMKIQEYLKLEEVKNKLQNEF 1007
            +  +QRKI E +D  D LR+F  GPET KLLTA EES+LI++IQE ++LEEVK +LQ+  
Sbjct: 232  RAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESELIVQIQELMRLEEVKKRLQSHL 291

Query: 1008 GHEPSLVEWGEAVGLSCRDLQSQLYSGKLSREKLL 1112
              EP++VEW EAVGLSC+ LQSQL+SG  SR+KL+
Sbjct: 292  KREPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLI 326


>ref|XP_006354351.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            [Solanum tuberosum]
          Length = 562

 Score =  235 bits (600), Expect = 2e-59
 Identities = 157/337 (46%), Positives = 205/337 (60%), Gaps = 14/337 (4%)
 Frame = +3

Query: 144  MEAA-RNFLVSPPLIPSSRTHLRNCSFTSSSPSVLTLHEQAAPALNNTPTAYLARHFPTS 320
            MEAA RN L SPP   S +T LRNCS      SVL LHE AAP L++ P AYL RH P S
Sbjct: 1    MEAAGRNLLSSPPTF-SQKTQLRNCS-----SSVLMLHEHAAPVLSSVPHAYLGRHVPAS 54

Query: 321  VHIQDHHDEALSTLLLSKDQRTSQATLDRRLINATAXXXXXXXXXXXXXXXKS-RIQLLH 497
                +   E    L L K+++TS AT+DRRL++A +                + ++QLL 
Sbjct: 55   AIGPEQQFENRLQLHLVKEEKTSLATIDRRLVDAASSELEENDAVDSEQNINALQVQLLR 114

Query: 498  MPGLWYLFRSLEAIQSVPM---------EAEKFSNVEAKSVIVLAKKALSASREATLLAE 650
             PG  Y F         P+         + +K  N E  SV+ LA+KAL ASREA LLAE
Sbjct: 115  CPGPSYSFPPYYLKGKGPLSPNKEPLHSKGDKLMNFEPHSVVALARKALLASREAALLAE 174

Query: 651  QSKLSGNNLDVALSPSPLTSESADIHLEVVKTVKSTRLLERRSKRRGA-KTKFVVPERNY 827
             SKL    LD +  P+ L++   D  L+  +TV+STR  ER+S++RGA K    V E N 
Sbjct: 175  DSKL----LDDSNFPNFLSTNLVDDKLKEQRTVRSTRFTERQSRKRGAPKPTQQVQETNR 230

Query: 828  SGKLHLQRKITEAFDKNDALRIFT-GPETK-LLTANEESDLIMKIQEYLKLEEVKNKLQN 1001
            SG+  ++RK+ E+ D ND LR+F  GPETK LLTA EES+LI+KIQ  +KL+EVK++LQ 
Sbjct: 231  SGRPDVRRKVNESIDLNDPLRMFLWGPETKQLLTAKEESELIVKIQISMKLQEVKHQLQI 290

Query: 1002 EFGHEPSLVEWGEAVGLSCRDLQSQLYSGKLSREKLL 1112
            +F HEP+ VEW EA G++ R+L+SQL SGK SREKL+
Sbjct: 291  QFAHEPTSVEWAEAAGITSRELKSQLLSGKSSREKLI 327


>ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
          Length = 572

 Score =  231 bits (590), Expect = 3e-58
 Identities = 153/341 (44%), Positives = 202/341 (59%), Gaps = 18/341 (5%)
 Frame = +3

Query: 144  MEAARNFLVSPPLIPSSRTHLRNCSFTSSS------PSVLTLHEQAAPALNNTPTAYLAR 305
            MEA  N L S P  P  RTH RN S + ++        VL LH+Q APA+ + PT  +AR
Sbjct: 1    MEAGTNILSSTPSFPP-RTHFRNSSSSGNAFFFYVVLFVLMLHDQVAPAVASIPTT-IAR 58

Query: 306  HFPTSVHIQDHHDEALSTLLLSKDQRTSQATLDRRLINATAXXXXXXXXXXXXXXXKSRI 485
             FPTSV +Q+  DE        KD+RT QATL++R +                       
Sbjct: 59   KFPTSVLLQEQRDEYRPFPQALKDERTFQATLEKRQMEIVVSADEENSDDHNQYMVNFER 118

Query: 486  QLLHMPGLWYLFRSLEA----------IQSVPMEAEKFSNVEAKSVIVLAKKALSASREA 635
            QLL  PGLWY   S +           ++S+  + E   +V+   V+ LAKKALSAS++A
Sbjct: 119  QLLLQPGLWYSLPSSQTGEKSPFSSSIMKSITTDIENSMDVKPCDVLALAKKALSASKQA 178

Query: 636  TLLAEQSKLSGNNLDVALSPSPLTSESADIHLEVVKTVKSTRLLERRSKRRGAKTKFVVP 815
              L E +KL G +L+ + SPS     S ++ LE  KTV+STRLLERRSK+R    K  V 
Sbjct: 179  VSLYENAKLLGADLEDSPSPSLGAISSPNLPLEE-KTVRSTRLLERRSKKR-RNPKVAVH 236

Query: 816  ERNYSGKLHLQRKITEAFDKNDALRIFT-GPET-KLLTANEESDLIMKIQEYLKLEEVKN 989
            E + S +  +QRKI E +D  D LR+F  GPET KLLTA EES+LI++IQE ++LEEVK 
Sbjct: 237  ENHGSRRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESELIVQIQELMRLEEVKK 296

Query: 990  KLQNEFGHEPSLVEWGEAVGLSCRDLQSQLYSGKLSREKLL 1112
            +LQ+    EP++VEW EAVGLSC+ LQSQL+SG  SR+KL+
Sbjct: 297  RLQSHLKREPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLI 337


>ref|XP_004246643.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            [Solanum lycopersicum]
          Length = 563

 Score =  229 bits (585), Expect = 1e-57
 Identities = 152/338 (44%), Positives = 203/338 (60%), Gaps = 15/338 (4%)
 Frame = +3

Query: 144  MEAA-RNFLVSPPLIPSSRTHLRNCSFTSSSPSVLTLHEQAAPALNNTPTAYLARHFPTS 320
            MEAA RN L SPP   S +T LRNCS      SVL LHE AAP L++ P  YL R+ P S
Sbjct: 1    MEAAGRNLLSSPPTF-SQKTQLRNCS-----SSVLMLHEHAAPVLSSVPHTYLGRYVPAS 54

Query: 321  VHIQDHHDEALSTLLLSKDQRTSQATLDRRLINATAXXXXXXXXXXXXXXXKS-RIQLLH 497
                + H E    L L K+++TS AT+DRRL+ A +                + ++QLLH
Sbjct: 55   AIGPEQHFENRLQLHLVKEEKTSLATIDRRLVEAASSELEENDAVDSEQNINALQVQLLH 114

Query: 498  MPGLWYLFRSLEAIQSVPM---------EAEKFSNVEAKSVIVLAKKALSASREATLLAE 650
             PG  Y F         P+         + +K  N E  SV+ LA+KAL AS+EA LLAE
Sbjct: 115  WPGPSYSFPPYYLKGKGPLSPNKEPLHSKGDKLMNFEPHSVVALARKALLASKEAALLAE 174

Query: 651  QSKLSGNNLDVALSPSPLTSESADIHLEVVKTVKSTRLLERRSKRRGAKTKF--VVPERN 824
             SKL    LD +  P+ L++   D  L+  +TV+STR +ER+S++RGA      V    N
Sbjct: 175  DSKL----LDDSHFPNFLSTHLVDDKLKEQRTVRSTRFIERQSRKRGAPKPIQEVQETNN 230

Query: 825  YSGKLHLQRKITEAFDKNDALRIFT-GPETK-LLTANEESDLIMKIQEYLKLEEVKNKLQ 998
             SG+  ++RK+ E+ D ND LR+F  GPETK LLTA EES+LI+KIQ  +KL+EVK++LQ
Sbjct: 231  RSGRPDVRRKVNESIDLNDPLRMFLWGPETKQLLTAKEESELIVKIQISMKLQEVKHQLQ 290

Query: 999  NEFGHEPSLVEWGEAVGLSCRDLQSQLYSGKLSREKLL 1112
             +F  EP+ +EW EA G++ R+L+SQL SGK SREKL+
Sbjct: 291  IQFAREPTSLEWAEAAGITSRELKSQLLSGKSSREKLI 328


>ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            isoform X3 [Citrus sinensis]
          Length = 561

 Score =  228 bits (582), Expect = 3e-57
 Identities = 145/337 (43%), Positives = 204/337 (60%), Gaps = 14/337 (4%)
 Frame = +3

Query: 144  MEAARNFLVSPPLIPSSRTHLRNCSFTSSSPSVLTLHEQAAPALNNTPTAYLARHFPTSV 323
            MEA RN L SPP  PS RT +++   +S+S S       +APA+ + PT+ +ARHFPTSV
Sbjct: 1    MEAGRNLLSSPPSFPS-RTRVKHSLSSSASSS----SSSSAPAVASVPTSSVARHFPTSV 55

Query: 324  HIQDHHDEALSTLLLSKDQRTSQATLDRRLINATAXXXXXXXXXXXXXXXKS-RIQLLHM 500
             +Q+  DE    L + K+ +TSQAT D R +   A               +    Q LH 
Sbjct: 56   LLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKNSGDLDQLVQDLEHQFLHW 115

Query: 501  PGLWYLFRSLE---------AIQSVPMEAEKFSNVEAKSVIVLAKKALSASREATLLAEQ 653
            P LW L   ++          +QS+  + E+  + E    + LA+KALSAS+EA  LAE 
Sbjct: 116  PDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAASLAEN 175

Query: 654  SKLSGNNL-DVALSPSPLTSESADIHLEVVKTVKSTRLLERRSKRRGAKTKFVVPERNY- 827
             KL+G    D++L+       S    LE VKTV+ST+ LERRSK+R      V     Y 
Sbjct: 176  PKLNGAEFTDISLT------SSLGYPLEEVKTVRSTQFLERRSKKRKVSKPKVTNHETYN 229

Query: 828  SGKLHLQRKITEAFDKNDALRIFT-GPET-KLLTANEESDLIMKIQEYLKLEEVKNKLQN 1001
            S K  +++K++E FD+ND LR+F  GPET KLLTA+EE +LI +IQ+ ++LE+ K+KLQ+
Sbjct: 230  SRKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFELIAQIQDLIRLEKEKSKLQS 289

Query: 1002 EFGHEPSLVEWGEAVGLSCRDLQSQLYSGKLSREKLL 1112
            +FG EP+L+EW +A+GLSCRDL+S+L+SG  SREKL+
Sbjct: 290  QFGREPTLIEWAKAIGLSCRDLKSELHSGNSSREKLI 326


>gb|EOY07878.1| RNA polymerase sigma factor rpoD, putative [Theobroma cacao]
          Length = 568

 Score =  225 bits (574), Expect = 2e-56
 Identities = 146/338 (43%), Positives = 207/338 (61%), Gaps = 15/338 (4%)
 Frame = +3

Query: 144  MEAARNFLVSPPLIPSSRTHLRNCSFTSSSPSVLTLHEQAAPALNNTPTAYLARHFPTSV 323
            MEAARN L+SPP   S+RT L++  F++SS SVL  HEQAAPA  + P   +ARHFPTSV
Sbjct: 1    MEAARN-LLSPPPTFSTRTQLKSSVFSTSSSSVLMFHEQAAPAATSIPITSVARHFPTSV 59

Query: 324  HIQDHHDE--ALSTLLLSKDQRTSQATLDRRLINATAXXXXXXXXXXXXXXXKSRIQLLH 497
             +Q+  D+   L  L   K+ +      D++ I   A                 + +LL 
Sbjct: 60   LLQEQRDDYRPLPVLHFFKEDKAYPGATDKQQIENGASLNEENASNNFGQLGFEK-KLLQ 118

Query: 498  MPGLWYLFRSLEA---------IQSVPMEAEKFSNVEAKSVIVLAKKALSASREATLLAE 650
             P L  L   LE+         +QSV  + ++  +VE  +++ LAKKALSAS++A  L+E
Sbjct: 119  WPDLTQLLSLLESEENPSSTSNMQSVAADTKEIVDVEPSNIVALAKKALSASKQAASLSE 178

Query: 651  QSKLSGNNLDVALSPSPLTSESADIHLEV--VKTVKSTRLLERRSKRRGAKTKFVVPERN 824
              KL   +LD +LS S  ++ S  + +E   V TV+STR LER+SKRR  + K  + E  
Sbjct: 179  DLKL---DLDDSLSNSLGSANSCTLPVEKEEVVTVRSTRRLERQSKRRRVQPKVTIRETY 235

Query: 825  YSGKLHLQRKITEAFDKNDALRIFT-GPETK-LLTANEESDLIMKIQEYLKLEEVKNKLQ 998
             S +  ++RK++E FD ND LR+F  GPETK LLTA EES+L  ++Q  ++LE+VK+KLQ
Sbjct: 236  SSRRTDVRRKLSEGFDPNDPLRLFLWGPETKQLLTAKEESELSNQVQNLMRLEKVKSKLQ 295

Query: 999  NEFGHEPSLVEWGEAVGLSCRDLQSQLYSGKLSREKLL 1112
            ++FG EP+LVEW EA+GL C  LQ++L+SG  SR+KL+
Sbjct: 296  SQFGREPTLVEWAEAIGLRCSALQAELHSGNSSRDKLI 333


>gb|EMJ06193.1| hypothetical protein PRUPE_ppa003513mg [Prunus persica]
          Length = 568

 Score =  221 bits (564), Expect = 3e-55
 Identities = 151/340 (44%), Positives = 204/340 (60%), Gaps = 17/340 (5%)
 Frame = +3

Query: 144  MEAARNFLVSPPLIPSSRTHLRNCSFTSSSPS--VLTLHEQAAPALNNTPTAYLARHFPT 317
            MEA R+FL S    PS+ THLR+    SSSPS  VL LHEQA PA+ + P   +ARHFPT
Sbjct: 1    MEAGRHFLSSSSAFPST-THLRH-PLPSSSPSTSVLMLHEQAVPAVTSVPITSVARHFPT 58

Query: 318  SVHIQDHHDEALSTLLLSKDQRTSQATLDRRLINATAXXXXXXXXXXXXXXXKSRIQLLH 497
            SV +Q+  DE    L + K+ +TS+A LDR  I   A                S    L 
Sbjct: 59   SVLLQEQRDEFKPLLHVLKEDKTSEAALDRMQIETGASVHEDLDIDDFYPLVNSSKPQLL 118

Query: 498  MPGLWYLFRSLEA---------IQSVPMEAEKFSNVEAKSVIVLAKKALSASREATLLAE 650
               +  +F SL+          ++S+   + K  +VE  +V+ LAKKALSASREA  LAE
Sbjct: 119  NHDILDVFSSLQTGAKPSTPLTLESLTTASNKHMDVEPCNVVALAKKALSASREAASLAE 178

Query: 651  QSKLSGNNLDVALSPSPLTSESADIHLEVVKTVKSTRLLERRSKR----RGAKTKFVVPE 818
             S+  G + D  L  + L    A+  +E  KTV+STR+LERR KR    +  K+K +  E
Sbjct: 179  DSQSMGADFD-DLGYTSL----ANWIVEEEKTVRSTRILERRRKRIKTRKVPKSKVIGHE 233

Query: 819  RNYSGKLHLQRKITEAFDKNDALRIFT-GPETK-LLTANEESDLIMKIQEYLKLEEVKNK 992
             N      +++KI+E F+ ND LR+F  GPET+ LLTA EE++LI ++Q+  KLEEVK++
Sbjct: 234  SNSFTGSDVRKKISEGFNPNDPLRLFLWGPETRQLLTAKEEAELIARVQDLFKLEEVKSR 293

Query: 993  LQNEFGHEPSLVEWGEAVGLSCRDLQSQLYSGKLSREKLL 1112
            LQ +FG EP+L+EW EAVG+SC+ L+SQL SG  SREKL+
Sbjct: 294  LQTQFGREPTLIEWAEAVGISCQILKSQLRSGTSSREKLI 333


>ref|XP_006428731.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
            gi|557530788|gb|ESR41971.1| hypothetical protein
            CICLE_v10011376mg [Citrus clementina]
          Length = 569

 Score =  219 bits (559), Expect = 1e-54
 Identities = 147/340 (43%), Positives = 203/340 (59%), Gaps = 17/340 (5%)
 Frame = +3

Query: 144  MEAARNFLVSPPLIPSS---RTHLRNCSFTSSSPSVLTLHEQAAPALNNTPTAYLARHFP 314
            MEA RN L SPP  PS    +  L + + +SSS SVL  +EQ+APA+ + PT+ +ARHFP
Sbjct: 1    MEAGRNLLSSPPSFPSRTRVKHSLSSSASSSSSSSVLMHNEQSAPAVASVPTSSVARHFP 60

Query: 315  TSVHIQDHHDEALSTLLLSKDQRTSQATLDRRLINATAXXXXXXXXXXXXXXXKS-RIQL 491
            TSV +Q+  DE    L + K+ +TSQAT D R +   A               +    Q 
Sbjct: 61   TSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKNSGDLDQLVQDLEHQF 120

Query: 492  LHMPGLWYLFRSLE---------AIQSVPMEAEKFSNVEAKSVIVLAKKALSASREATLL 644
            LH P LW L   ++          +QS+  + E+  + E    + LA+KALSAS+EA  L
Sbjct: 121  LHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAASL 180

Query: 645  AEQSKLSGNNL-DVALSPSPLTSESADIHLEVVKTVKSTRLLERRSKRRG-AKTKFVVPE 818
            AE  KL+G    D++L      + S    LE VKTV+STR LERRSK+R  +K K    E
Sbjct: 181  AENPKLNGAEFTDISL------TSSLGYPLEEVKTVRSTRFLERRSKKRKVSKPKVTNHE 234

Query: 819  RNYSGKLHLQRKITEAFDKNDALRIFT-GPET-KLLTANEESDLIMKIQEYLKLEEVKNK 992
               S K  +++K++E FD ND LR+F  GPET KLLTA+EE +LI +IQ+ ++LE+ K+K
Sbjct: 235  TYNSRKASVKKKLSEGFDPNDPLRLFLWGPETRKLLTADEEFELIAQIQDLIRLEKEKSK 294

Query: 993  LQNEFGHEPSLVEWGEAVGLSCRDLQSQLYSGKLSREKLL 1112
            LQ++FG EP+L+       LSCRDL+S+L+SG  SREKL+
Sbjct: 295  LQSQFGREPTLILKLLRFHLSCRDLKSELHSGNSSREKLI 334


>ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223541372|gb|EEF42923.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 548

 Score =  218 bits (555), Expect = 4e-54
 Identities = 144/329 (43%), Positives = 195/329 (59%), Gaps = 6/329 (1%)
 Frame = +3

Query: 144  MEAARNFLVSPPLIPSSRTHLRNCSFTSSS---PSVLTLHEQAAPALNNTPTAYLARHFP 314
            ME AR FL SPP  PS RTH +N   +S +     V  LHEQA PA+ + PT  +AR+FP
Sbjct: 1    METARTFLSSPPPFPS-RTHFKNSLSSSDAYVDNFVFMLHEQAVPAVTSAPTTSIARNFP 59

Query: 315  TSVHIQDHHDEALSTLLLSKDQRTSQATLDRRLINATAXXXXXXXXXXXXXXXKSRIQLL 494
            TSV +Q+  DE    L + K+ +T QAT+D + ++                       +L
Sbjct: 60   TSVLLQEQRDEFRPLLNIFKEDKTFQATVDTKQMDPGTSDQEGICSDVLDQL------IL 113

Query: 495  HMPGLWYLFRSLEAIQSVPMEAEKFSNVEAKSVIVLAKKALSASREATLLAEQSKLSGNN 674
            H    W L      +QS+    ++   VE  +VI LA+KALSAS+EA LLA++     + 
Sbjct: 114  HSNLSWSL-----TMQSITTNTDELMVVEPTNVIDLARKALSASKEAALLAQKCANLDDT 168

Query: 675  LDVALSPSPLTSESADIHLEVVKTVKSTRLLERRSK-RRGAKTKFVVPERNYSGKLHLQR 851
            +   L P+ L++ S    LE VKTV+STR LER+SK RR  KTK +  E   S +  +Q+
Sbjct: 169  VSTGLEPTDLSNFS----LEEVKTVRSTRRLERQSKNRRVTKTKEIFHEPYSSRRAGVQK 224

Query: 852  KITEAFDKNDALRIFT-GPETK-LLTANEESDLIMKIQEYLKLEEVKNKLQNEFGHEPSL 1025
            KI E FD  D LR+F  GPETK LLTA EES+LI ++Q+ + LE VK K + +FG +P+L
Sbjct: 225  KINEGFDPKDPLRLFLWGPETKQLLTAKEESELIGQVQDLMSLENVKEKFKLQFGRDPTL 284

Query: 1026 VEWGEAVGLSCRDLQSQLYSGKLSREKLL 1112
            VEW +AVGLS   +QSQL+SG  SREKL+
Sbjct: 285  VEWADAVGLSYSVMQSQLHSGNRSREKLI 313


>ref|XP_002326192.1| predicted protein [Populus trichocarpa]
          Length = 535

 Score =  212 bits (539), Expect = 3e-52
 Identities = 142/327 (43%), Positives = 189/327 (57%), Gaps = 4/327 (1%)
 Frame = +3

Query: 144  MEAARNFLVSPPLIPSSRTHLRNCSFTSSSPSVLTLHEQAAPALNNTPTAYLARHFPTSV 323
            MEA R  L S P  P+ RTHL+N    S + SVL L EQA PA+++ PT   A+HFPTSV
Sbjct: 1    MEAGRTLLSSSPSFPT-RTHLKN----SLTSSVLILREQATPAVSSIPTTSTAQHFPTSV 55

Query: 324  HIQDHHDEALSTLLLSKDQRTSQATLDRRLIN-ATAXXXXXXXXXXXXXXXKSRIQLLHM 500
             +Q+  DE      + K+ R SQATLDRR     T+                   QL H 
Sbjct: 56   LLQEQRDEFRPLQNIFKEDRASQATLDRRKTEIGTSGHEGKDSDELDQLVENFEYQLHHW 115

Query: 501  PGLWYLFRSLEAIQSVPMEAEKFSNVEAKSVIVLAKKALSASREATLLAEQSKLSGNNLD 680
            P  W L              +K  +VE  +VI LAK+ALSAS+ A  LA+      NN D
Sbjct: 116  PAYWNL-------------TDKLIDVEPTNVINLAKRALSASKHAAFLAD------NNTD 156

Query: 681  VALSPSPLTSESADIHLEVVKTVKSTRLLERRS-KRRGAKTKFVVPERNYSGKLHLQRKI 857
            +    +  ++ S+   LE VK V+S R L R+S  RR  KTK ++ E   S    +Q+++
Sbjct: 157  L---DNLASTSSSSFSLEEVKIVRSRRHLARQSLNRRAPKTKDLIFETYDSKSADIQKRL 213

Query: 858  TEAFDKNDALRIFT-GPETK-LLTANEESDLIMKIQEYLKLEEVKNKLQNEFGHEPSLVE 1031
            ++ FD ND LR+F  GPETK LLTA EE +LI +IQ+ + LE VKN+L+++FG EP+LVE
Sbjct: 214  SQGFDPNDPLRLFLWGPETKQLLTAKEEFELIAQIQDLMNLEGVKNRLESQFGREPTLVE 273

Query: 1032 WGEAVGLSCRDLQSQLYSGKLSREKLL 1112
            W +AVGLSC  L+ QL+SG  SREKL+
Sbjct: 274  WAQAVGLSCHVLKLQLHSGNRSREKLI 300


>gb|EXC16188.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 543

 Score =  211 bits (538), Expect = 3e-52
 Identities = 143/335 (42%), Positives = 191/335 (57%), Gaps = 12/335 (3%)
 Frame = +3

Query: 144  MEAARNFLVSPPLIPSSRTHLRNCSFTSSSPSVLTLHEQAAPALNNTPTAYLARHFPTSV 323
            ME  RN L  PP  PS RTHLRN   +SSS S        A  + + P   +A+ F TSV
Sbjct: 1    MEVGRNLLSPPPSFPS-RTHLRNYLPSSSSASTSA---NVATGITSMPATSIAQPFSTSV 56

Query: 324  HIQDHHDEALSTLLLSKDQRTSQATLDRRLINATAXXXXXXXXXXXXXXXKSRIQLLHMP 503
             +Q+  DE    L ++K+ +TSQ  L+RR  ++ A               +     +H P
Sbjct: 57   LLQEQRDEFKPLLRVNKEDKTSQGVLNRRQNDSGALVHEDTLEDYNQFVWEFERPSVHWP 116

Query: 504  GLWYLFRSLEA----IQSVPMEAEKFS-----NVEAKSVIVLAKKALSASREATLLAEQS 656
            G W++  SL+       S+ ME    S     +VE    I LAKKAL AS+EA  LAE+S
Sbjct: 117  GFWHVLPSLKTKVKLSSSLTMETTMGSCTKDVDVEVSDAIALAKKALMASKEAASLAEES 176

Query: 657  KLSGNNLDVALSPSPLTSESADIHLEVVKTVKSTRLLERRSKRRGAKTKFVVPERNYSGK 836
            KL G + D  LS S L            KTV+STRLLERRSKRR      V+   N   +
Sbjct: 177  KLVGTDSDDMLSVSFLGKGD--------KTVRSTRLLERRSKRRKVPESSVLFYENPRNR 228

Query: 837  L-HLQRKITEAFDKNDALRIF-TGPETK-LLTANEESDLIMKIQEYLKLEEVKNKLQNEF 1007
               ++++++E  + +D LR+F  GPET+ LLT  EES+LI ++Q+ +KLE+VK +LQ+EF
Sbjct: 229  AADIRKRLSEGLNSDDPLRLFLAGPETRQLLTFEEESELIAQVQDLIKLEQVKARLQSEF 288

Query: 1008 GHEPSLVEWGEAVGLSCRDLQSQLYSGKLSREKLL 1112
            G EP+LVEW EAVGLSCR LQSQ+ SG  SREKL+
Sbjct: 289  GREPTLVEWAEAVGLSCRILQSQIQSGTSSREKLI 323


>ref|XP_006381426.1| RNA POLYMERASE SIGMA-70 FACTOR family protein [Populus trichocarpa]
            gi|550336129|gb|ERP59223.1| RNA POLYMERASE SIGMA-70
            FACTOR family protein [Populus trichocarpa]
          Length = 535

 Score =  211 bits (538), Expect = 3e-52
 Identities = 142/327 (43%), Positives = 189/327 (57%), Gaps = 4/327 (1%)
 Frame = +3

Query: 144  MEAARNFLVSPPLIPSSRTHLRNCSFTSSSPSVLTLHEQAAPALNNTPTAYLARHFPTSV 323
            MEA R  L S P  P+ RTHL+N    S + SVL L EQA PA+++ PT   A+HFPTSV
Sbjct: 1    MEAGRTLLSSSPSFPT-RTHLKN----SLTSSVLILREQATPAVSSIPTTSTAQHFPTSV 55

Query: 324  HIQDHHDEALSTLLLSKDQRTSQATLDRRLIN-ATAXXXXXXXXXXXXXXXKSRIQLLHM 500
             +Q+  DE      + K+ R SQATLDRR     T+                   QL H 
Sbjct: 56   LLQEQRDEFRPLQNIFKEDRASQATLDRRKTEIGTSGHEGKDSDELDQLVENFEYQLHHW 115

Query: 501  PGLWYLFRSLEAIQSVPMEAEKFSNVEAKSVIVLAKKALSASREATLLAEQSKLSGNNLD 680
            P  W L              +K  +VE  +VI LAK+ALSAS+ A  LA+      NN D
Sbjct: 116  PAYWNL-------------TDKLIDVEPTNVINLAKRALSASKHAAFLAD------NNTD 156

Query: 681  VALSPSPLTSESADIHLEVVKTVKSTRLLERRS-KRRGAKTKFVVPERNYSGKLHLQRKI 857
            +    +  ++ S+   LE VK V+S R L R+S  RR  KTK ++ E   S    +Q+++
Sbjct: 157  L---DNLASTSSSSFSLEEVKIVRSRRHLARQSLNRRAPKTKDLIFETYDSKSADVQKRL 213

Query: 858  TEAFDKNDALRIFT-GPETK-LLTANEESDLIMKIQEYLKLEEVKNKLQNEFGHEPSLVE 1031
            ++ FD ND LR+F  GPETK LLTA EE +LI +IQ+ + LE VKN+L+++FG EP+LVE
Sbjct: 214  SQGFDPNDPLRLFLWGPETKQLLTAKEEFELIAQIQDLMNLEGVKNRLESQFGREPTLVE 273

Query: 1032 WGEAVGLSCRDLQSQLYSGKLSREKLL 1112
            W +AVGLSC  L+ QL+SG  SREKL+
Sbjct: 274  WAQAVGLSCHVLKLQLHSGNRSREKLI 300


>ref|XP_006428732.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
            gi|557530789|gb|ESR41972.1| hypothetical protein
            CICLE_v10011376mg [Citrus clementina]
          Length = 561

 Score =  211 bits (536), Expect = 6e-52
 Identities = 143/337 (42%), Positives = 199/337 (59%), Gaps = 14/337 (4%)
 Frame = +3

Query: 144  MEAARNFLVSPPLIPSSRTHLRNCSFTSSSPSVLTLHEQAAPALNNTPTAYLARHFPTSV 323
            MEA RN L SPP  PS RT +++   +S+S S       +APA+ + PT+ +ARHFPTSV
Sbjct: 1    MEAGRNLLSSPPSFPS-RTRVKHSLSSSASSS----SSSSAPAVASVPTSSVARHFPTSV 55

Query: 324  HIQDHHDEALSTLLLSKDQRTSQATLDRRLINATAXXXXXXXXXXXXXXXKS-RIQLLHM 500
             +Q+  DE    L + K+ +TSQAT D R +   A               +    Q LH 
Sbjct: 56   LLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKNSGDLDQLVQDLEHQFLHW 115

Query: 501  PGLWYLFRSLE---------AIQSVPMEAEKFSNVEAKSVIVLAKKALSASREATLLAEQ 653
            P LW L   ++          +QS+  + E+  + E    + LA+KALSAS+EA  LAE 
Sbjct: 116  PDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAASLAEN 175

Query: 654  SKLSGNNL-DVALSPSPLTSESADIHLEVVKTVKSTRLLERRSKRRG-AKTKFVVPERNY 827
             KL+G    D++L      + S    LE VKTV+STR LERRSK+R  +K K    E   
Sbjct: 176  PKLNGAEFTDISL------TSSLGYPLEEVKTVRSTRFLERRSKKRKVSKPKVTNHETYN 229

Query: 828  SGKLHLQRKITEAFDKNDALRIFT-GPET-KLLTANEESDLIMKIQEYLKLEEVKNKLQN 1001
            S K  +++K++E FD ND LR+F  GPET KLLTA+EE +LI +IQ+ ++LE+ K+KLQ+
Sbjct: 230  SRKASVKKKLSEGFDPNDPLRLFLWGPETRKLLTADEEFELIAQIQDLIRLEKEKSKLQS 289

Query: 1002 EFGHEPSLVEWGEAVGLSCRDLQSQLYSGKLSREKLL 1112
            +FG EP+L+       LSCRDL+S+L+SG  SREKL+
Sbjct: 290  QFGREPTLILKLLRFHLSCRDLKSELHSGNSSREKLI 326


>ref|XP_006428730.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
            gi|557530787|gb|ESR41970.1| hypothetical protein
            CICLE_v10011376mg [Citrus clementina]
          Length = 558

 Score =  204 bits (520), Expect = 4e-50
 Identities = 139/337 (41%), Positives = 196/337 (58%), Gaps = 14/337 (4%)
 Frame = +3

Query: 144  MEAARNFLVSPPLIPSSRTHLRNCSFTSSSPSVLTLHEQAAPALNNTPTAYLARHFPTSV 323
            MEA RN L SPP  PS RT +++   +S+S S       ++ ++ + PT+ +ARHFPTSV
Sbjct: 1    MEAGRNLLSSPPSFPS-RTRVKHSLSSSASSS-------SSSSVASVPTSSVARHFPTSV 52

Query: 324  HIQDHHDEALSTLLLSKDQRTSQATLDRRLINATAXXXXXXXXXXXXXXXKS-RIQLLHM 500
             +Q+  DE    L + K+ +TSQAT D R +   A               +    Q LH 
Sbjct: 53   LLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKNSGDLDQLVQDLEHQFLHW 112

Query: 501  PGLWYLFRSLE---------AIQSVPMEAEKFSNVEAKSVIVLAKKALSASREATLLAEQ 653
            P LW L   ++          +QS+  + E+  + E    + LA+KALSAS+EA  LAE 
Sbjct: 113  PDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAASLAEN 172

Query: 654  SKLSGNNL-DVALSPSPLTSESADIHLEVVKTVKSTRLLERRSKRRGAKTKFVVPERNY- 827
             KL+G    D++L+       S    LE VKTV+STR LERRSK+R      V     Y 
Sbjct: 173  PKLNGAEFTDISLT------SSLGYPLEEVKTVRSTRFLERRSKKRKVSKPKVTNHETYN 226

Query: 828  SGKLHLQRKITEAFDKNDALRIFT-GPET-KLLTANEESDLIMKIQEYLKLEEVKNKLQN 1001
            S K  +++K++E FD ND LR+F  GPET KLLTA+EE +LI +IQ+ ++LE+ K+KLQ+
Sbjct: 227  SRKASVKKKLSEGFDPNDPLRLFLWGPETRKLLTADEEFELIAQIQDLIRLEKEKSKLQS 286

Query: 1002 EFGHEPSLVEWGEAVGLSCRDLQSQLYSGKLSREKLL 1112
            +FG EP+L+       LSCRDL+S+L+SG  SREKL+
Sbjct: 287  QFGREPTLILKLLRFHLSCRDLKSELHSGNSSREKLI 323


>ref|XP_004304450.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            [Fragaria vesca subsp. vesca]
          Length = 554

 Score =  196 bits (497), Expect = 2e-47
 Identities = 136/329 (41%), Positives = 181/329 (55%), Gaps = 6/329 (1%)
 Frame = +3

Query: 144  MEAARNFLVSPPLIPSSRTHLRNCSFTSSSPSVLTLHEQAAPALNNTPTAYLARHFPTSV 323
            MEA R+FL S    PS+         +S S SVL LHEQAAPA+ + PT+++ RHFPTSV
Sbjct: 1    MEAGRHFLSSSSAFPSTTQLRHPLPPSSPSTSVLMLHEQAAPAVTSVPTSFITRHFPTSV 60

Query: 324  HIQDHHDEALSTLLLSKDQRTSQATLDRRLINATAXXXXXXXXXXXXXXXKSRIQLLHMP 503
             +Q+  DE    L + K+++ SQATLDR  I  T                  R   +   
Sbjct: 61   LLQEQRDEFKPLLHIFKEEKASQATLDRIQIENTTAEEDFNIDDFYKLVKDFRQLHVTPS 120

Query: 504  GLWYLFRSLEAIQSVPMEAEKFSNVEAKSVIVLAKKALSASREATLLAEQSKLSGNNLDV 683
             +     +  A++S    A    +VE   V+ LAK ALSAS EA  LAE SK     L+ 
Sbjct: 121  QIGENSPTGSALES-NTTANVHMDVEPSDVLTLAKHALSASLEAASLAETSKSISAGLNE 179

Query: 684  ALSPSPLTSESADIHLEVVKTVKSTRLLERRSKRRGAKTKFVVPERNY----SGKLHLQR 851
            + S      E         +TV+ST+LLERR KR   +        NY    S    L+R
Sbjct: 180  STSLGLGWEE---------ETVRSTQLLERRRKRLKKRNLLNSKVPNYENSSSNSSDLRR 230

Query: 852  KITEAFDKNDALRIFT-GPETK-LLTANEESDLIMKIQEYLKLEEVKNKLQNEFGHEPSL 1025
            K  E  + ND LR+F  GPET+ LLT  EE++LI ++Q+  KLE VK++LQ++FG EP+L
Sbjct: 231  KYREGLNPNDPLRLFLWGPETRQLLTLKEETELIARVQDVFKLEAVKSRLQSQFGREPTL 290

Query: 1026 VEWGEAVGLSCRDLQSQLYSGKLSREKLL 1112
            +EW EAVG+SC+ LQSQL  G  SREKL+
Sbjct: 291  IEWAEAVGISCQMLQSQLRCGTSSREKLI 319


>ref|XP_006588793.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            [Glycine max]
          Length = 575

 Score =  192 bits (489), Expect = 2e-46
 Identities = 134/342 (39%), Positives = 184/342 (53%), Gaps = 19/342 (5%)
 Frame = +3

Query: 144  MEAARN-FLVSPPLIPSSRTHLRNCSFTSSSPSVLTLHEQAAPALNNTPTAYLARHFPTS 320
            ME AR  F  SPP  P +         +SS+ SVL LHEQA+P + +  + + A++FP S
Sbjct: 1    MEFARTMFCSSPPFPPRTHHPWSTLPSSSSTSSVLMLHEQASPTVASWSSNFSAQNFPAS 60

Query: 321  VHIQDHHDEALSTLLLSKDQRTSQATLDRRLINATAXXXXXXXXXXXXXXXKSRIQLLHM 500
            V + +  DE    L +SK+ +TSQA L  R ++                    R  L H 
Sbjct: 61   VLLPEQRDEYRPLLHMSKEDKTSQAMLSTRQMDTVTVHEENNTENADQVVLDFRKHLHHW 120

Query: 501  PGLWYLFRSLE--------AIQSVPMEAEKFSNVEAKSVIVLAKKALSASREATLLAEQS 656
            P L YL  S +         ++ V ++ E+  N    + + LAKKALS S++ + + E  
Sbjct: 121  PNLQYLLTSSQIGEVAASSTLEHVSVDLERRPNGVQFNGVSLAKKALSTSKQESSVVED- 179

Query: 657  KLSGNNLDVALSPSPLTSES-ADIHLEVVKTVKSTRLLERRSKRRGAKTKFVVPERNYSG 833
             L     D    P  L S S AD  +   KTV+STRLLERRSK+R      V+ +  Y  
Sbjct: 180  -LKSIKADDDSIPFGLASTSLADPSIGRNKTVRSTRLLERRSKQRKVPKSKVIDDETYLA 238

Query: 834  -------KLHLQRKITEAFDKNDALRIFT-GPETK-LLTANEESDLIMKIQEYLKLEEVK 986
                   KL  ++K  E  D++D LR+F  GPETK LLT  +ES LI +IQ+ L+LEEVK
Sbjct: 239  RKDDAQEKLRAEKKKNEELDQDDPLRLFLWGPETKQLLTLEQESQLISQIQDLLRLEEVK 298

Query: 987  NKLQNEFGHEPSLVEWGEAVGLSCRDLQSQLYSGKLSREKLL 1112
              LQ++FG EP++ EW E  GL+CR LQSQL+SG  SREKL+
Sbjct: 299  TNLQSQFGREPTMAEWAEGAGLNCRLLQSQLHSGNRSREKLI 340


>gb|ESW16353.1| hypothetical protein PHAVU_007G149600g [Phaseolus vulgaris]
          Length = 582

 Score =  186 bits (472), Expect = 2e-44
 Identities = 129/343 (37%), Positives = 186/343 (54%), Gaps = 20/343 (5%)
 Frame = +3

Query: 144  MEAARNFLVSPPLIPSSRTHLRNCSFTSSSPSVLTLHEQAAPALNNTPTAYLARHFPTSV 323
            ME AR    S P  P  RTH  N   TSSS SVL L EQA+  + +  + + A++FP SV
Sbjct: 10   MEFARTMFCSSPPFPP-RTHPWNTHPTSSSTSVLMLREQASSTVASWSSNFSAQNFPASV 68

Query: 324  HIQDHHDEALSTLLLSKDQRTSQATLDRRLINATAXXXXXXXXXXXXXXXKSRIQLLHMP 503
             +Q+  DE    L +SK+ +TSQA L+ R ++                    R  L   P
Sbjct: 69   LLQEQRDEYRPLLHMSKEDKTSQAILNTRQMDMDTVHEENNTGNADQIVLDFRKHLHLWP 128

Query: 504  GLWYLFRSLEA--------IQSVPMEAEKFSNVEAKSVIVLAKKALSASREATLLAE--- 650
             L  L  S +         +Q V +++E+ ++    + + LAKKALS +++ + + E   
Sbjct: 129  RLQNLLNSSQTGEIAASSTLQHVSVDSERRTDGVQCNGVSLAKKALSTAKQTSSVVEGLK 188

Query: 651  QSKLSGNNLDVALSPSPLTSESADIHLEVVKTVKSTRLLERRSKRRGAKTKFVVPERNY- 827
              K   +++   L+ + L   S   +    KTV+STRLLERR+K+R      V  +  Y 
Sbjct: 189  SIKADDDSIPFGLASTGLADPSVGRN----KTVRSTRLLERRAKQRKVSKSIVKDDETYL 244

Query: 828  ------SGKLHLQRKITEAFDKNDALRIFT-GPETK-LLTANEESDLIMKIQEYLKLEEV 983
                    ++  ++KI E FD+ND LR+F  GPETK LLT  +ES+LI KIQ+ LKLEE+
Sbjct: 245  TRKDDAQERIRKEKKINEEFDQNDTLRMFLRGPETKQLLTLEQESELISKIQDLLKLEEL 304

Query: 984  KNKLQNEFGHEPSLVEWGEAVGLSCRDLQSQLYSGKLSREKLL 1112
            K +LQ++FG EP++ EW E  GL+CR L SQL  G  SREKL+
Sbjct: 305  KTRLQSQFGREPTMAEWAEGAGLNCRMLHSQLRHGNRSREKLI 347


>ref|XP_003542550.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Glycine
            max]
          Length = 574

 Score =  185 bits (469), Expect = 3e-44
 Identities = 131/341 (38%), Positives = 179/341 (52%), Gaps = 18/341 (5%)
 Frame = +3

Query: 144  MEAARNFLVSPPLIPSSRTHLRNCSFTSSSPSVLTLHEQAAPALNNTPTAYLARHFPTSV 323
            ME +R    S P  P    H  N    SSS SVL L EQA+P + +  + + A++FP SV
Sbjct: 1    MEFSRTMFCSSPPFPPRTHHPWNTLPLSSSTSVLMLREQASPTVASWSSNFSAQNFPASV 60

Query: 324  HIQDHHDEALSTLLLSKDQRTSQATLDRRLINATAXXXXXXXXXXXXXXXKSRIQLLHMP 503
             +Q+  DE    L +SK+ +TSQA L  R ++                    R  L + P
Sbjct: 61   LLQEQRDEYRPLLHMSKEDKTSQAMLSTRQMDTVMVHEENNTENADQVVLDFRKHLHYWP 120

Query: 504  GLWYLFRSLEA--------IQSVPMEAEKFSNVEAKSVIVLAKKALSASREATLLAEQSK 659
             L  L  S +         +Q V  + ++ +N    + + LAKKALS S++ + + E   
Sbjct: 121  HLQNLLASSQTGEISASSTLQQVSSDLDRHTNGVQCNRVSLAKKALSTSKQGSSVVED-- 178

Query: 660  LSGNNLDVALSPSPLTSES-ADIHLEVVKTVKSTRLLERRSKRRGAKTKFVVPERNYSG- 833
            L     D    P  L S   AD  +   KTV+STRLLERRSK+R      V+ +  Y   
Sbjct: 179  LKSIKADDDSIPFGLASTGLADPSIGRNKTVRSTRLLERRSKQRKVPKSKVIDDETYLAR 238

Query: 834  ------KLHLQRKITEAFDKNDALRIFT-GPETK-LLTANEESDLIMKIQEYLKLEEVKN 989
                  KL +++K  E  D+ND L  F  GPETK LLT  +ES LI +IQ+ L+LEEVK 
Sbjct: 239  KDDAHEKLRVEKKKNEELDQNDPLCFFLRGPETKQLLTLEQESQLISQIQDLLRLEEVKT 298

Query: 990  KLQNEFGHEPSLVEWGEAVGLSCRDLQSQLYSGKLSREKLL 1112
            KLQ++FG EP++ EW E VGL+CR L +QL SG  SREKL+
Sbjct: 299  KLQSQFGREPTMAEWAEGVGLNCRMLHAQLRSGSRSREKLI 339