BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00012354
         (1814 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21810.3| unnamed protein product [Vitis vinifera]              620   e-175
ref|XP_002271727.1| PREDICTED: DNA repair protein recA homolog 1...   620   e-175
ref|XP_006346054.1| PREDICTED: DNA repair protein recA homolog 1...   610   e-172
gb|EMJ16727.1| hypothetical protein PRUPE_ppa007080mg [Prunus pe...   609   e-171
ref|XP_004243994.1| PREDICTED: DNA repair protein recA homolog 1...   609   e-171
gb|EOY13828.1| RecA DNA recombination family protein isoform 1 [...   606   e-170
ref|XP_004288592.1| PREDICTED: DNA repair protein recA homolog 1...   603   e-170
ref|XP_006370468.1| DNA repair protein recA [Populus trichocarpa...   600   e-169
ref|XP_002332188.1| predicted protein [Populus trichocarpa]           598   e-168
gb|ESW05313.1| hypothetical protein PHAVU_011G169700g [Phaseolus...   598   e-168
ref|XP_003546633.1| PREDICTED: DNA repair protein recA homolog 1...   594   e-167
ref|XP_002466766.1| hypothetical protein SORBIDRAFT_01g013810 [S...   593   e-167
gb|EXB42558.1| DNA repair protein recA-1-like protein [Morus not...   591   e-166
ref|NP_001050738.1| Os03g0639700 [Oryza sativa Japonica Group] g...   591   e-166
ref|XP_004982347.1| PREDICTED: DNA repair protein recA homolog 1...   590   e-166
ref|XP_003562018.1| PREDICTED: DNA repair protein recA homolog 1...   590   e-166
ref|XP_006651624.1| PREDICTED: DNA repair protein recA homolog 1...   588   e-165
ref|NP_001148809.1| protein recA [Zea mays] gi|195622282|gb|ACG3...   588   e-165
ref|XP_006301561.1| hypothetical protein CARUB_v10021995mg [Caps...   585   e-164
ref|XP_006477998.1| PREDICTED: DNA repair protein recA homolog 1...   585   e-164

>emb|CBI21810.3| unnamed protein product [Vitis vinifera]
          Length = 384

 Score =  620 bits (1598), Expect = e-175
 Identities = 312/364 (85%), Positives = 335/364 (92%), Gaps = 3/364 (0%)
 Frame = +3

Query: 306  IRVRSEF---VNGALSADSDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETF 476
            +R+R EF   VNGALS+D DPRF+DRQKALEAAMNDIN+SFGKGSVTRLGSAGGALVETF
Sbjct: 8    MRLRCEFEVKVNGALSSDPDPRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETF 67

Query: 477  PSGCLTLDFALGGGIPKGRIVEIYGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFDP 656
            PSGCLTLDFALGGG+PKGRIVEIYGPESSGKTTLALHAIAEVQ+LGGNAMLVDAEHAFDP
Sbjct: 68   PSGCLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP 127

Query: 657  AYSKSLGVDVENLIVCQPDNGEMALEIADRMCRSGAVDLICIDSVSALTPRAEIEGEIGM 836
            AYSK+LGVDVENLIVCQPD+GEMALEIADRMCRSGA+DLIC+DSVSALTPRAEIEGEIGM
Sbjct: 128  AYSKALGVDVENLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGM 187

Query: 837  QQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASV 1016
            QQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFAS+
Sbjct: 188  QQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASL 247

Query: 1017 RLEIRPIGKIKSVKGDEDIGLXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAE 1196
            RLEIRPIGKIKS KGDEDIGL             PYKQAEFEIIFGEGVSKLGCILDCAE
Sbjct: 248  RLEIRPIGKIKSSKGDEDIGLRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAE 307

Query: 1197 MADIVLKKGSWYSYGDHRLGQGRERALQYLRENPKISEEIEKMVRPMMVEGGGQLASFDM 1376
            + D+V+KKGSWYSYGD+RLGQGR+RALQYLRENP +  EIEK+VRPMM EG GQL +  +
Sbjct: 308  LMDVVVKKGSWYSYGDNRLGQGRDRALQYLRENPLVCHEIEKIVRPMMAEGIGQLGAPHV 367

Query: 1377 KYAP 1388
            + +P
Sbjct: 368  RLSP 371


>ref|XP_002271727.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Vitis vinifera]
          Length = 415

 Score =  620 bits (1598), Expect = e-175
 Identities = 312/364 (85%), Positives = 335/364 (92%), Gaps = 3/364 (0%)
 Frame = +3

Query: 306  IRVRSEF---VNGALSADSDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETF 476
            +R+R EF   VNGALS+D DPRF+DRQKALEAAMNDIN+SFGKGSVTRLGSAGGALVETF
Sbjct: 39   MRLRCEFEVKVNGALSSDPDPRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETF 98

Query: 477  PSGCLTLDFALGGGIPKGRIVEIYGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFDP 656
            PSGCLTLDFALGGG+PKGRIVEIYGPESSGKTTLALHAIAEVQ+LGGNAMLVDAEHAFDP
Sbjct: 99   PSGCLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP 158

Query: 657  AYSKSLGVDVENLIVCQPDNGEMALEIADRMCRSGAVDLICIDSVSALTPRAEIEGEIGM 836
            AYSK+LGVDVENLIVCQPD+GEMALEIADRMCRSGA+DLIC+DSVSALTPRAEIEGEIGM
Sbjct: 159  AYSKALGVDVENLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGM 218

Query: 837  QQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASV 1016
            QQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFAS+
Sbjct: 219  QQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASL 278

Query: 1017 RLEIRPIGKIKSVKGDEDIGLXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAE 1196
            RLEIRPIGKIKS KGDEDIGL             PYKQAEFEIIFGEGVSKLGCILDCAE
Sbjct: 279  RLEIRPIGKIKSSKGDEDIGLRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAE 338

Query: 1197 MADIVLKKGSWYSYGDHRLGQGRERALQYLRENPKISEEIEKMVRPMMVEGGGQLASFDM 1376
            + D+V+KKGSWYSYGD+RLGQGR+RALQYLRENP +  EIEK+VRPMM EG GQL +  +
Sbjct: 339  LMDVVVKKGSWYSYGDNRLGQGRDRALQYLRENPLVCHEIEKIVRPMMAEGIGQLGAPHV 398

Query: 1377 KYAP 1388
            + +P
Sbjct: 399  RLSP 402


>ref|XP_006346054.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Solanum tuberosum]
          Length = 419

 Score =  610 bits (1574), Expect = e-172
 Identities = 308/379 (81%), Positives = 335/379 (88%), Gaps = 3/379 (0%)
 Frame = +3

Query: 267  YSQLKKHHVAVKPIRVRSEF---VNGALSADSDPRFIDRQKALEAAMNDINNSFGKGSVT 437
            Y ++ +     + IRVRSEF   +NG  S DSD RF+DRQKAL+AAMNDIN+SFGKGSVT
Sbjct: 30   YQKVSRPQFPARGIRVRSEFDHKINGTFSPDSDARFLDRQKALDAAMNDINSSFGKGSVT 89

Query: 438  RLGSAGGALVETFPSGCLTLDFALGGGIPKGRIVEIYGPESSGKTTLALHAIAEVQRLGG 617
            RLGSAGGALVETFPSGCLTLDFALGGGIPKGRIVEIYGPESSGKTTLALHAIAEVQ+LGG
Sbjct: 90   RLGSAGGALVETFPSGCLTLDFALGGGIPKGRIVEIYGPESSGKTTLALHAIAEVQKLGG 149

Query: 618  NAMLVDAEHAFDPAYSKSLGVDVENLIVCQPDNGEMALEIADRMCRSGAVDLICIDSVSA 797
            NAMLVDAEHAFDPAYSK+LGVDVENLIVCQPDNGEMALEIADRMCRSGAVDLICIDSVSA
Sbjct: 150  NAMLVDAEHAFDPAYSKALGVDVENLIVCQPDNGEMALEIADRMCRSGAVDLICIDSVSA 209

Query: 798  LTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEV 977
            LTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEV
Sbjct: 210  LTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEV 269

Query: 978  TSGGIALKFFASVRLEIRPIGKIKSVKGDEDIGLXXXXXXXXXXXXXPYKQAEFEIIFGE 1157
            TSGGIALKFFASVRLEIR  GKIKS KGDE++G+             PYKQAEFEI+FGE
Sbjct: 270  TSGGIALKFFASVRLEIRSTGKIKSAKGDEEVGIKVRVRVQKSKVSRPYKQAEFEIMFGE 329

Query: 1158 GVSKLGCILDCAEMADIVLKKGSWYSYGDHRLGQGRERALQYLRENPKISEEIEKMVRPM 1337
            GVSKLGC+LDCAE+ ++V KKGSWY+YG+HRLGQGRE+ALQYLRENP +SEEIEKMVR  
Sbjct: 330  GVSKLGCVLDCAELIEVVAKKGSWYNYGEHRLGQGREKALQYLRENPLLSEEIEKMVRSS 389

Query: 1338 MVEGGGQLASFDMKYAPPR 1394
            ++E  G L S  +K+  P+
Sbjct: 390  VLETTGFLGSSSLKHPLPQ 408


>gb|EMJ16727.1| hypothetical protein PRUPE_ppa007080mg [Prunus persica]
          Length = 383

 Score =  609 bits (1571), Expect = e-171
 Identities = 309/363 (85%), Positives = 332/363 (91%), Gaps = 4/363 (1%)
 Frame = +3

Query: 291  VAVKPI-RVRSEF---VNGALSADSDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGG 458
            +AVKPI RVR E    VNGALSADSDPRFIDRQKALEAAMNDIN+SFGKGSVTRLGSAGG
Sbjct: 1    MAVKPIKRVRCELQAKVNGALSADSDPRFIDRQKALEAAMNDINSSFGKGSVTRLGSAGG 60

Query: 459  ALVETFPSGCLTLDFALGGGIPKGRIVEIYGPESSGKTTLALHAIAEVQRLGGNAMLVDA 638
            ALVETFPSGCLTLD ALGGG+PKGRIVEI+GPESSGKTTLALHAIAEVQ+LGGNAMLVDA
Sbjct: 61   ALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDA 120

Query: 639  EHAFDPAYSKSLGVDVENLIVCQPDNGEMALEIADRMCRSGAVDLICIDSVSALTPRAEI 818
            EHAFDPAYSK+LGVDVENLIVCQPD+GEMALEIADRMCRSGA+DLIC+DSVSALTPRAEI
Sbjct: 121  EHAFDPAYSKALGVDVENLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEI 180

Query: 819  EGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIAL 998
            EGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIAL
Sbjct: 181  EGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIAL 240

Query: 999  KFFASVRLEIRPIGKIKSVKGDEDIGLXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGC 1178
            KFFASVRLEIR  GKIKSVKGDE+IG+             PYKQAEFEI+FGEGV KLGC
Sbjct: 241  KFFASVRLEIRSTGKIKSVKGDEEIGVRVRVRVQKSKVSRPYKQAEFEIVFGEGVGKLGC 300

Query: 1179 ILDCAEMADIVLKKGSWYSYGDHRLGQGRERALQYLRENPKISEEIEKMVRPMMVEGGGQ 1358
            ILDCAE  D+V+KKGSWYSYGDHRLGQGR++ALQYLRENP + +EIEK+VR M+ +G GQ
Sbjct: 301  ILDCAETMDVVVKKGSWYSYGDHRLGQGRDKALQYLRENPLLLDEIEKIVRSMITDGTGQ 360

Query: 1359 LAS 1367
            + +
Sbjct: 361  VGT 363


>ref|XP_004243994.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Solanum lycopersicum]
          Length = 419

 Score =  609 bits (1571), Expect = e-171
 Identities = 308/379 (81%), Positives = 335/379 (88%), Gaps = 3/379 (0%)
 Frame = +3

Query: 267  YSQLKKHHVAVKPIRVRSEF---VNGALSADSDPRFIDRQKALEAAMNDINNSFGKGSVT 437
            Y ++ +   +   IRVRSEF   +NGA S DSD R +DRQKAL+AAMNDIN+SFGKGSVT
Sbjct: 30   YQKVSRPQFSACGIRVRSEFDHKINGAFSPDSDARILDRQKALDAAMNDINSSFGKGSVT 89

Query: 438  RLGSAGGALVETFPSGCLTLDFALGGGIPKGRIVEIYGPESSGKTTLALHAIAEVQRLGG 617
            RLGSAGGALVETFPSGCLTLDFALGGGIPKGRIVEIYGPESSGKTTLALHAIAEVQ+LGG
Sbjct: 90   RLGSAGGALVETFPSGCLTLDFALGGGIPKGRIVEIYGPESSGKTTLALHAIAEVQKLGG 149

Query: 618  NAMLVDAEHAFDPAYSKSLGVDVENLIVCQPDNGEMALEIADRMCRSGAVDLICIDSVSA 797
            NAMLVDAEHAFDPAYSK+LGVDVENLIVCQPDNGEMALEIADRMCRSGAVDLICIDSVSA
Sbjct: 150  NAMLVDAEHAFDPAYSKALGVDVENLIVCQPDNGEMALEIADRMCRSGAVDLICIDSVSA 209

Query: 798  LTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEV 977
            LTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEV
Sbjct: 210  LTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEV 269

Query: 978  TSGGIALKFFASVRLEIRPIGKIKSVKGDEDIGLXXXXXXXXXXXXXPYKQAEFEIIFGE 1157
            TSGGIALKFFASVRLEIR  GKIKS KGDE++G+             PYKQAEFEI+FGE
Sbjct: 270  TSGGIALKFFASVRLEIRSTGKIKSAKGDEEVGIKVRVRVQKSKVSRPYKQAEFEIMFGE 329

Query: 1158 GVSKLGCILDCAEMADIVLKKGSWYSYGDHRLGQGRERALQYLRENPKISEEIEKMVRPM 1337
            GVSKLGC+LDCAE+ ++V KKGSWY+YG+HRLGQGRE+ALQYLRENP +SEEIEKMVR  
Sbjct: 330  GVSKLGCVLDCAELIEVVAKKGSWYNYGEHRLGQGREKALQYLRENPLLSEEIEKMVRSS 389

Query: 1338 MVEGGGQLASFDMKYAPPR 1394
            ++E  G L S  +K+  P+
Sbjct: 390  VLETNGFLGSSSLKHPLPQ 408


>gb|EOY13828.1| RecA DNA recombination family protein isoform 1 [Theobroma cacao]
          Length = 485

 Score =  606 bits (1562), Expect = e-170
 Identities = 317/401 (79%), Positives = 343/401 (85%), Gaps = 4/401 (0%)
 Frame = +3

Query: 189  FPFKFYQSPK-LMYQNRFLLQVFQCSSYSQLKKHHVAVKPIRVRSEF---VNGALSADSD 356
            FPFK     + L  QN F  +    SS+  L    V  +  +V  EF   VNGALS +SD
Sbjct: 72   FPFKLKLHHRYLPLQNHFRQRPPLTSSHLPLAA--VKKRLRKVHCEFEPRVNGALSPNSD 129

Query: 357  PRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGIPKGRI 536
             RF+DRQKALEAAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLD ALGGG+PKGRI
Sbjct: 130  SRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRI 189

Query: 537  VEIYGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFDPAYSKSLGVDVENLIVCQPDN 716
            VE+YGPESSGKTTLALHAIAEVQ+LGGNAMLVDAEHAFDPAYSK+LGVDVENLIVCQPDN
Sbjct: 190  VEVYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDN 249

Query: 717  GEMALEIADRMCRSGAVDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGN 896
            GEMALEIADRMCRSGA+DLIC+DSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGN
Sbjct: 250  GEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGN 309

Query: 897  ASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRPIGKIKSVKGDEDIG 1076
            ASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRP GKIKSVKGDEDIG
Sbjct: 310  ASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRPSGKIKSVKGDEDIG 369

Query: 1077 LXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAEMADIVLKKGSWYSYGDHRLG 1256
            L             PYKQAEFEIIFGEGVSKLGCILDCAEM D+V+KKGSWYSYG+HRLG
Sbjct: 370  LRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEMMDVVVKKGSWYSYGEHRLG 429

Query: 1257 QGRERALQYLRENPKISEEIEKMVRPMMVEGGGQLASFDMK 1379
            QGR++ALQYLR+NP +  EIEK+VR MM +G   ++S  +K
Sbjct: 430  QGRDKALQYLRDNPVLHGEIEKIVRSMMADGTLHMSSAPVK 470


>ref|XP_004288592.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Fragaria vesca subsp. vesca]
          Length = 418

 Score =  603 bits (1555), Expect = e-170
 Identities = 309/381 (81%), Positives = 335/381 (87%), Gaps = 4/381 (1%)
 Frame = +3

Query: 258  CSSYSQLKKHHVAVKPIRVRSEF---VNGALS-ADSDPRFIDRQKALEAAMNDINNSFGK 425
            CS   +     +A K  RVRSE    VNGALS ADSD  F+DRQKALEAAMNDIN+SFGK
Sbjct: 27   CSLPQRFNLQSMAAK--RVRSELQVKVNGALSTADSDSLFLDRQKALEAAMNDINSSFGK 84

Query: 426  GSVTRLGSAGGALVETFPSGCLTLDFALGGGIPKGRIVEIYGPESSGKTTLALHAIAEVQ 605
            GSVTRLGSAGGALVETFPSGCLTLD ALGGG+PKGRIVEI+GPESSGKTTLALHAIAEVQ
Sbjct: 85   GSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQ 144

Query: 606  RLGGNAMLVDAEHAFDPAYSKSLGVDVENLIVCQPDNGEMALEIADRMCRSGAVDLICID 785
            RLGGNAMLVDAEHAFDPAYSK+LGVDVENLIVCQPD+GEMALEIADRMCRSGA+DLIC+D
Sbjct: 145  RLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDHGEMALEIADRMCRSGAIDLICVD 204

Query: 786  SVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYG 965
            SVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYG
Sbjct: 205  SVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYG 264

Query: 966  NPEVTSGGIALKFFASVRLEIRPIGKIKSVKGDEDIGLXXXXXXXXXXXXXPYKQAEFEI 1145
            NPEVTSGGIALKFFASVRLEIR  GKIKSVKGDE+IG+             PYKQAEFEI
Sbjct: 265  NPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEEIGVRVRVRVQKSKVSRPYKQAEFEI 324

Query: 1146 IFGEGVSKLGCILDCAEMADIVLKKGSWYSYGDHRLGQGRERALQYLRENPKISEEIEKM 1325
            +FGEGVSKLGCILDCAEM D+++KKGSWYSYGDHRLGQGR+++LQYLRENP + +EIEK+
Sbjct: 325  VFGEGVSKLGCILDCAEMMDVIVKKGSWYSYGDHRLGQGRDKSLQYLRENPVLLDEIEKI 384

Query: 1326 VRPMMVEGGGQLASFDMKYAP 1388
            VR  M +  GQ+ SF  ++ P
Sbjct: 385  VRSTMTDATGQVGSFHTRHLP 405


>ref|XP_006370468.1| DNA repair protein recA [Populus trichocarpa]
            gi|550349661|gb|ERP67037.1| DNA repair protein recA
            [Populus trichocarpa]
          Length = 427

 Score =  600 bits (1546), Expect = e-169
 Identities = 312/395 (78%), Positives = 341/395 (86%), Gaps = 7/395 (1%)
 Frame = +3

Query: 186  NFPFK---FYQSPKLMYQNRFLLQVFQCSSYSQLKKHHVAVKPIRVRSEF---VNGA-LS 344
            +FP K   F+ S  L +Q  F    F+ S ++ +KK     KP  +R EF   VNG+ LS
Sbjct: 15   HFPSKSTPFHPSLPLYFQ--FSRVCFKTSHFAAVKK-----KPKEIRCEFDSKVNGSPLS 67

Query: 345  ADSDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGIP 524
            +D D RF+D+QKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGG+P
Sbjct: 68   SDLDARFLDKQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGLP 127

Query: 525  KGRIVEIYGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFDPAYSKSLGVDVENLIVC 704
            KGRIVEI+GPESSGKTTLALHAIAEVQ+ GG+AMLVDAEHAFDPAYSK+LGVDVENLIVC
Sbjct: 128  KGRIVEIFGPESSGKTTLALHAIAEVQKFGGHAMLVDAEHAFDPAYSKALGVDVENLIVC 187

Query: 705  QPDNGEMALEIADRMCRSGAVDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRK 884
            QPDNGEMALEIADRMCRSGAVDLIC+DSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRK
Sbjct: 188  QPDNGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRK 247

Query: 885  MSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRPIGKIKSVKGD 1064
            MSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIR  GKIKSVKGD
Sbjct: 248  MSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGD 307

Query: 1065 EDIGLXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAEMADIVLKKGSWYSYGD 1244
            ED+G+             PYKQAEFEIIFGEGVS+LGCILDCAEM D+V+KKGSWYSYGD
Sbjct: 308  EDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSQLGCILDCAEMMDVVVKKGSWYSYGD 367

Query: 1245 HRLGQGRERALQYLRENPKISEEIEKMVRPMMVEG 1349
            HRLGQGR++ALQYLR+NP + EEIEK VR  M +G
Sbjct: 368  HRLGQGRDKALQYLRDNPHLQEEIEKKVRSTMTDG 402


>ref|XP_002332188.1| predicted protein [Populus trichocarpa]
          Length = 387

 Score =  598 bits (1543), Expect = e-168
 Identities = 307/383 (80%), Positives = 334/383 (87%), Gaps = 4/383 (1%)
 Frame = +3

Query: 213  PKLMYQNRFLLQVFQCSSYSQLKKHHVAVKPIRVRSEF---VNGA-LSADSDPRFIDRQK 380
            P L    +F    F+ S ++ +KK     KP  +R EF   VNG+ LS+D D RF+D+QK
Sbjct: 3    PSLPLYFQFSRVCFKTSHFAAVKK-----KPKEIRCEFDSKVNGSPLSSDLDARFLDKQK 57

Query: 381  ALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGIPKGRIVEIYGPES 560
            ALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGG+PKGRIVEI+GPES
Sbjct: 58   ALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGLPKGRIVEIFGPES 117

Query: 561  SGKTTLALHAIAEVQRLGGNAMLVDAEHAFDPAYSKSLGVDVENLIVCQPDNGEMALEIA 740
            SGKTTLALHAIAEVQ+ GG+AMLVDAEHAFDPAYSK+LGVDVENLIVCQPDNGEMALEIA
Sbjct: 118  SGKTTLALHAIAEVQKFGGHAMLVDAEHAFDPAYSKALGVDVENLIVCQPDNGEMALEIA 177

Query: 741  DRMCRSGAVDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTL 920
            DRMCRSGAVDLIC+DSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKMSGNASKAGCTL
Sbjct: 178  DRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTL 237

Query: 921  IFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRPIGKIKSVKGDEDIGLXXXXXXX 1100
            IFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIR  GKIKSVKGDED+G+       
Sbjct: 238  IFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVRVQ 297

Query: 1101 XXXXXXPYKQAEFEIIFGEGVSKLGCILDCAEMADIVLKKGSWYSYGDHRLGQGRERALQ 1280
                  PYKQAEFEIIFGEGVS+LGCILDCAEM D+V+KKGSWYSYGDHRLGQGR++ALQ
Sbjct: 298  KSKVSRPYKQAEFEIIFGEGVSQLGCILDCAEMMDVVVKKGSWYSYGDHRLGQGRDKALQ 357

Query: 1281 YLRENPKISEEIEKMVRPMMVEG 1349
            YLR+NP + EEIEK VR  M +G
Sbjct: 358  YLRDNPHLQEEIEKKVRSTMTDG 380


>gb|ESW05313.1| hypothetical protein PHAVU_011G169700g [Phaseolus vulgaris]
          Length = 415

 Score =  598 bits (1541), Expect = e-168
 Identities = 298/353 (84%), Positives = 321/353 (90%)
 Frame = +3

Query: 330  NGALSADSDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDFAL 509
            NGALS D DPRFIDRQKALEAAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLD AL
Sbjct: 50   NGALSGDFDPRFIDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCAL 109

Query: 510  GGGIPKGRIVEIYGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFDPAYSKSLGVDVE 689
            GGG+PKGRIVEI+GPESSGKTTLALHAIAEVQ+LGGNAMLVDAEHAFDPAYSK+LGVDVE
Sbjct: 110  GGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVE 169

Query: 690  NLIVCQPDNGEMALEIADRMCRSGAVDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMS 869
            NLIVCQPD+GEMALEIADRMCRSGA+DLIC+DSVSALTPRAEIEGEIGMQQ+GLQARLMS
Sbjct: 170  NLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMS 229

Query: 870  QALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRPIGKIK 1049
            QALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFAS+RLE+RP GKIK
Sbjct: 230  QALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEVRPAGKIK 289

Query: 1050 SVKGDEDIGLXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAEMADIVLKKGSW 1229
            S KGDE+IGL             PYK AEFEIIFGEG+SKLGCILDCAEM DIVLKKGSW
Sbjct: 290  SAKGDEEIGLKVRLRVQKSKVSRPYKLAEFEIIFGEGISKLGCILDCAEMTDIVLKKGSW 349

Query: 1230 YSYGDHRLGQGRERALQYLRENPKISEEIEKMVRPMMVEGGGQLASFDMKYAP 1388
            YSYGDHRLGQGR++A+QYL+EN  + EEIEK+VR  +V+G  Q +   MK +P
Sbjct: 350  YSYGDHRLGQGRDKAIQYLKENTNLLEEIEKVVRSSLVDGSNQASLAHMKNSP 402


>ref|XP_003546633.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Glycine max]
          Length = 414

 Score =  594 bits (1531), Expect = e-167
 Identities = 295/350 (84%), Positives = 318/350 (90%)
 Frame = +3

Query: 330  NGALSADSDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDFAL 509
            NGALS D DPRFIDRQKALEAAMNDINN+FGKGSVTRLGSAGGALVETFPSGCLTLD AL
Sbjct: 50   NGALSGDFDPRFIDRQKALEAAMNDINNNFGKGSVTRLGSAGGALVETFPSGCLTLDCAL 109

Query: 510  GGGIPKGRIVEIYGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFDPAYSKSLGVDVE 689
            GGG+PKGRI+EIYGPESSGKTTLALHAIAEVQ+LGGNAMLVDAEHAFDPAYSK+LGVDVE
Sbjct: 110  GGGLPKGRIIEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVE 169

Query: 690  NLIVCQPDNGEMALEIADRMCRSGAVDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMS 869
            NLIVCQPD+GEMALEIADRMCRSGA+DLIC+DSVSALTPRAEIEGEIGMQQ+GLQARLMS
Sbjct: 170  NLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMS 229

Query: 870  QALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRPIGKIK 1049
            QALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFAS+RLE+RP GKIK
Sbjct: 230  QALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEVRPTGKIK 289

Query: 1050 SVKGDEDIGLXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAEMADIVLKKGSW 1229
            S KGDE+IGL             PYK AEFEIIFGEG+SKLGCILDCAEM DIV KKGSW
Sbjct: 290  SAKGDEEIGLKVRLRVQKSKVSRPYKIAEFEIIFGEGISKLGCILDCAEMTDIVSKKGSW 349

Query: 1230 YSYGDHRLGQGRERALQYLRENPKISEEIEKMVRPMMVEGGGQLASFDMK 1379
            YSYGDHRLGQGR++A+QYL+EN  + EEIEK+VR  +++G  Q +   MK
Sbjct: 350  YSYGDHRLGQGRDKAIQYLKENTHLLEEIEKVVRSSLIDGTNQTSPVHMK 399


>ref|XP_002466766.1| hypothetical protein SORBIDRAFT_01g013810 [Sorghum bicolor]
            gi|241920620|gb|EER93764.1| hypothetical protein
            SORBIDRAFT_01g013810 [Sorghum bicolor]
          Length = 415

 Score =  593 bits (1529), Expect = e-167
 Identities = 296/356 (83%), Positives = 322/356 (90%), Gaps = 4/356 (1%)
 Frame = +3

Query: 309  RVRSEFV----NGALSADSDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETF 476
            R+R EFV    NGALS + DPR +DRQKAL+AAMNDIN+SFGKGSVTRLGSAGGA VETF
Sbjct: 41   RLRCEFVAGGGNGALSGEDDPRLVDRQKALDAAMNDINSSFGKGSVTRLGSAGGAFVETF 100

Query: 477  PSGCLTLDFALGGGIPKGRIVEIYGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFDP 656
            PSGCLTLDFALGGG+PKGR+VE+YGPESSGKTTLALHAIAEVQ+LGGNAMLVDAEHAFDP
Sbjct: 101  PSGCLTLDFALGGGLPKGRVVEVYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP 160

Query: 657  AYSKSLGVDVENLIVCQPDNGEMALEIADRMCRSGAVDLICIDSVSALTPRAEIEGEIGM 836
            AYSK+LGVD+ENLIVCQPDNGEMALEIADRMCRSGA+DLICIDSVSALTPRAEIEGEIGM
Sbjct: 161  AYSKALGVDIENLIVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGEIGM 220

Query: 837  QQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASV 1016
            QQMGLQARLMSQALRKMSGNASKAGCTL+FLNQIRYKIGV+YGNPEVTSGGIALKFFASV
Sbjct: 221  QQMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASV 280

Query: 1017 RLEIRPIGKIKSVKGDEDIGLXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAE 1196
            RLEIRPIGKIKS KGDED+G+             PYKQAEFEIIFGEGVSKLGC+LDCAE
Sbjct: 281  RLEIRPIGKIKSPKGDEDVGVKVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAE 340

Query: 1197 MADIVLKKGSWYSYGDHRLGQGRERALQYLRENPKISEEIEKMVRPMMVEGGGQLA 1364
            + D+V KKGSWYSY D RLGQGRE+ALQYLRE+P I +EIEK+VR M+ EG   ++
Sbjct: 341  LMDVVAKKGSWYSYKDIRLGQGREKALQYLRESPTICDEIEKVVRAMIPEGSRHMS 396


>gb|EXB42558.1| DNA repair protein recA-1-like protein [Morus notabilis]
          Length = 438

 Score =  591 bits (1524), Expect = e-166
 Identities = 304/380 (80%), Positives = 329/380 (86%), Gaps = 14/380 (3%)
 Frame = +3

Query: 261  SSYSQLKKHHVAVKPI--RVRSEF---VNGALSADSDPRFIDRQKALEAAMNDINNSFGK 425
            SS S L++  V+      R+R EF   +NGAL  + DPRF+DRQKALEAAMNDINNSFGK
Sbjct: 36   SSASSLRRRSVSSPSAIRRIRCEFDAKINGALPGEFDPRFLDRQKALEAAMNDINNSFGK 95

Query: 426  GSVTRLGSAGGALVETFPSGCLTLDFALGGGIPKGRIVEIYGPESSGKTTLALHAIAEVQ 605
            GSVTRLGSAGGALVETFPSGCLTLD ALGGG+P+GRIVEIYGPESSGKTTLALHAIAEVQ
Sbjct: 96   GSVTRLGSAGGALVETFPSGCLTLDLALGGGLPRGRIVEIYGPESSGKTTLALHAIAEVQ 155

Query: 606  RLGGNAMLVDAEHAFDPAYSKSLGVDVENLIVCQPDNGEMALEIADRMCRSGAVDLICID 785
            +LGGNAMLVDAEHAFDPAYSK+LGVDVENLIVCQPD+GEMALEIADRMCRSGA+DLIC+D
Sbjct: 156  KLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDHGEMALEIADRMCRSGAIDLICVD 215

Query: 786  SVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYG 965
            SVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKA CTLIFLNQIRYKIGVYYG
Sbjct: 216  SVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKACCTLIFLNQIRYKIGVYYG 275

Query: 966  NPEVTSGGIALKFFASVRLEIRPIGKIKSVKGDEDIGL---------XXXXXXXXXXXXX 1118
            NPEVTSGGIALKFFASVRLEIR  GKIKSVKGDE+IGL                      
Sbjct: 276  NPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEEIGLRVRVRIQKSKKGINKFPSQVSR 335

Query: 1119 PYKQAEFEIIFGEGVSKLGCILDCAEMADIVLKKGSWYSYGDHRLGQGRERALQYLRENP 1298
            PYKQAEFEIIFGEGVSKLGC+LDCAE+ D++ KKGSWYSYGDHRLGQGR+R+LQYLRENP
Sbjct: 336  PYKQAEFEIIFGEGVSKLGCVLDCAEIMDVIAKKGSWYSYGDHRLGQGRDRSLQYLRENP 395

Query: 1299 KISEEIEKMVRPMMVEGGGQ 1358
             + +EIEK+VR  + EG GQ
Sbjct: 396  LLLDEIEKIVRSKLAEGTGQ 415


>ref|NP_001050738.1| Os03g0639700 [Oryza sativa Japonica Group]
            gi|108710024|gb|ABF97819.1| DNA repair protein recA,
            chloroplast precursor, putative, expressed [Oryza sativa
            Japonica Group] gi|113549209|dbj|BAF12652.1| Os03g0639700
            [Oryza sativa Japonica Group]
            gi|215704578|dbj|BAG94211.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 418

 Score =  591 bits (1523), Expect = e-166
 Identities = 295/356 (82%), Positives = 321/356 (90%), Gaps = 4/356 (1%)
 Frame = +3

Query: 309  RVRSEFV----NGALSADSDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETF 476
            R+R EFV    NGALS + DPR IDRQKAL+AAMNDIN+SFGKGSVTRLGSAGGA VETF
Sbjct: 45   RLRCEFVAGGGNGALSGEDDPRLIDRQKALDAAMNDINSSFGKGSVTRLGSAGGAFVETF 104

Query: 477  PSGCLTLDFALGGGIPKGRIVEIYGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFDP 656
            PSGCLTLDFALGGG+PKGR+VE+YGPESSGKTTLALHAIAEVQ+LGGNAMLVDAEHAFDP
Sbjct: 105  PSGCLTLDFALGGGLPKGRVVEVYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP 164

Query: 657  AYSKSLGVDVENLIVCQPDNGEMALEIADRMCRSGAVDLICIDSVSALTPRAEIEGEIGM 836
            AYSK+LGVD+ENLIVCQPDNGEMALEIADRMCRSGA+DLICIDSVSALTPRAEIEGEIGM
Sbjct: 165  AYSKALGVDIENLIVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGEIGM 224

Query: 837  QQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASV 1016
            QQMGLQARLMSQALRKMSGNASKAGCTL+FLNQIRYKIGV+YGNPEVTSGGIALKFFASV
Sbjct: 225  QQMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASV 284

Query: 1017 RLEIRPIGKIKSVKGDEDIGLXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAE 1196
            RLEIRPIGKIKS KGDED+G+             PYKQAEFEIIFGEGVSKLGC+LDCAE
Sbjct: 285  RLEIRPIGKIKSAKGDEDVGVKVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAE 344

Query: 1197 MADIVLKKGSWYSYGDHRLGQGRERALQYLRENPKISEEIEKMVRPMMVEGGGQLA 1364
            + ++V KKGSWYSY + RLGQGRE+ALQYLRE+P I +EIEK VR M+ EG   ++
Sbjct: 345  LMEVVAKKGSWYSYKEMRLGQGREKALQYLRESPTICDEIEKAVRAMIPEGARHMS 400


>ref|XP_004982347.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Setaria italica]
          Length = 417

 Score =  590 bits (1520), Expect = e-166
 Identities = 294/357 (82%), Positives = 320/357 (89%), Gaps = 4/357 (1%)
 Frame = +3

Query: 291  VAVKPIRVRSEFV----NGALSADSDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGG 458
            V  +  R+R EFV    NGALS + DPR +DRQKAL+AAM+DINNSFGKGSVTRLGSAGG
Sbjct: 37   VTARARRLRCEFVAGGGNGALSGEDDPRLVDRQKALDAAMSDINNSFGKGSVTRLGSAGG 96

Query: 459  ALVETFPSGCLTLDFALGGGIPKGRIVEIYGPESSGKTTLALHAIAEVQRLGGNAMLVDA 638
            A VETFPSGCLTLDFALGGG+PKGR+VE+YGPESSGKTTLALHAIAE+Q+LGGNAMLVDA
Sbjct: 97   AFVETFPSGCLTLDFALGGGLPKGRVVEVYGPESSGKTTLALHAIAEIQKLGGNAMLVDA 156

Query: 639  EHAFDPAYSKSLGVDVENLIVCQPDNGEMALEIADRMCRSGAVDLICIDSVSALTPRAEI 818
            EHAFDPAYSK+LGVD+ENLIVCQPDNGEMALEIADRMCRSGA+DLICIDSVSALTPRAEI
Sbjct: 157  EHAFDPAYSKALGVDIENLIVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEI 216

Query: 819  EGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIAL 998
            EGEIGMQQMGLQARLMSQALRKMSGNASKAGCTL+FLNQIRYKIGV+YGNPEVTSGGIAL
Sbjct: 217  EGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIAL 276

Query: 999  KFFASVRLEIRPIGKIKSVKGDEDIGLXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGC 1178
            KFFASVRLEIR  GKIKS KGDED+G+             PYKQAEFEIIFGEGVSKLGC
Sbjct: 277  KFFASVRLEIRSTGKIKSAKGDEDVGVKVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGC 336

Query: 1179 ILDCAEMADIVLKKGSWYSYGDHRLGQGRERALQYLRENPKISEEIEKMVRPMMVEG 1349
            +LDCAE+ ++V KKGSWYSY D RLGQGRE+ALQYLRENP I +EIEK+VR M+ EG
Sbjct: 337  VLDCAELMEVVAKKGSWYSYKDMRLGQGREKALQYLRENPTICDEIEKVVRAMIPEG 393


>ref|XP_003562018.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            isoform 1 [Brachypodium distachyon]
          Length = 412

 Score =  590 bits (1520), Expect = e-166
 Identities = 295/351 (84%), Positives = 319/351 (90%), Gaps = 4/351 (1%)
 Frame = +3

Query: 309  RVRSEFV----NGALSADSDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETF 476
            R+R EFV    NGALS + DPR IDRQKAL+AAMNDINNSFGKGSVTRLGSAGGA VETF
Sbjct: 38   RLRCEFVASVGNGALSGEDDPRLIDRQKALDAAMNDINNSFGKGSVTRLGSAGGAFVETF 97

Query: 477  PSGCLTLDFALGGGIPKGRIVEIYGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFDP 656
            PSGCLTLDFALGGG+PKGR+VE+YGPESSGKTTLALHAIAE+Q+LGGNAMLVDAEHAFDP
Sbjct: 98   PSGCLTLDFALGGGLPKGRVVEVYGPESSGKTTLALHAIAEIQKLGGNAMLVDAEHAFDP 157

Query: 657  AYSKSLGVDVENLIVCQPDNGEMALEIADRMCRSGAVDLICIDSVSALTPRAEIEGEIGM 836
            AYSK+LGVD+ENLIVCQPDNGEMALEIADRMCRSGA+DLICIDSVSALTPRAEIEGEIGM
Sbjct: 158  AYSKALGVDIENLIVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGEIGM 217

Query: 837  QQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASV 1016
            QQMGLQARLMSQALRKMSGNASKAGCTL+FLNQIRYKIGV+YGNPEVTSGGIALKFFASV
Sbjct: 218  QQMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASV 277

Query: 1017 RLEIRPIGKIKSVKGDEDIGLXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAE 1196
            RLEIR IGKIKS KGDED+G+             PYKQAEFEI+FGEGVSKLGCILDCAE
Sbjct: 278  RLEIRHIGKIKSAKGDEDVGVKVRVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCILDCAE 337

Query: 1197 MADIVLKKGSWYSYGDHRLGQGRERALQYLRENPKISEEIEKMVRPMMVEG 1349
            + ++V KKGSWYSY D RLGQGRE+ALQYLRE+P I +EIEK+VR M+ EG
Sbjct: 338  LMEVVAKKGSWYSYKDIRLGQGREKALQYLRESPTICDEIEKVVRAMIPEG 388


>ref|XP_006651624.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like,
            partial [Oryza brachyantha]
          Length = 371

 Score =  588 bits (1516), Expect = e-165
 Identities = 291/340 (85%), Positives = 313/340 (92%)
 Frame = +3

Query: 330  NGALSADSDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDFAL 509
            NGALS + DPR IDRQKAL+AAMNDIN+SFGKGSVTRLGSAGGA VETFPSGCLTLDFAL
Sbjct: 9    NGALSGEDDPRLIDRQKALDAAMNDINSSFGKGSVTRLGSAGGAFVETFPSGCLTLDFAL 68

Query: 510  GGGIPKGRIVEIYGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFDPAYSKSLGVDVE 689
            GGG+PKGR+VE+YGPESSGKTTLALHAIAEVQ+LGGNAMLVDAEHAFDPAYSK+LGVD+E
Sbjct: 69   GGGLPKGRVVEVYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDIE 128

Query: 690  NLIVCQPDNGEMALEIADRMCRSGAVDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMS 869
            NLIVCQPDNGEMALEIADRMCRSGA+DLICIDSVSALTPRAEIEGEIGMQQMGLQARLMS
Sbjct: 129  NLIVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMS 188

Query: 870  QALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRPIGKIK 1049
            QALRKMSGNASKAGCTL+FLNQIRYKIGV+YGNPEVTSGGIALKFFASVRLEIRPIGKIK
Sbjct: 189  QALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRPIGKIK 248

Query: 1050 SVKGDEDIGLXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAEMADIVLKKGSW 1229
            S KGDED+G+             PYKQAEFEIIFGEGVSKLGC+LDCAE+ ++V KKGSW
Sbjct: 249  SAKGDEDVGVKVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAELMEVVAKKGSW 308

Query: 1230 YSYGDHRLGQGRERALQYLRENPKISEEIEKMVRPMMVEG 1349
            YSY D RLGQGRE+ALQYLRE+P I +EIEK VR M+ EG
Sbjct: 309  YSYKDMRLGQGREKALQYLRESPTICDEIEKAVRAMIPEG 348


>ref|NP_001148809.1| protein recA [Zea mays] gi|195622282|gb|ACG32971.1| protein recA [Zea
            mays] gi|238008650|gb|ACR35360.1| unknown [Zea mays]
            gi|414871794|tpg|DAA50351.1| TPA: putative recA DNA
            recombination family protein isoform 1 [Zea mays]
            gi|414871795|tpg|DAA50352.1| TPA: putative recA DNA
            recombination family protein isoform 2 [Zea mays]
          Length = 415

 Score =  588 bits (1516), Expect = e-165
 Identities = 293/356 (82%), Positives = 319/356 (89%), Gaps = 4/356 (1%)
 Frame = +3

Query: 309  RVRSEFV----NGALSADSDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETF 476
            R+R EFV    NGALS + DPR +DRQK L+AAMNDINNSFGKGSVTRLGSAGGA VETF
Sbjct: 41   RLRCEFVAGGGNGALSGEDDPRLVDRQKVLDAAMNDINNSFGKGSVTRLGSAGGAFVETF 100

Query: 477  PSGCLTLDFALGGGIPKGRIVEIYGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFDP 656
            PSGCLTLDFALGGG+PKGR+VE+YGPESSGKTTLALHAIAE+Q+LGGNAMLVDAEHAFDP
Sbjct: 101  PSGCLTLDFALGGGLPKGRVVEVYGPESSGKTTLALHAIAEIQKLGGNAMLVDAEHAFDP 160

Query: 657  AYSKSLGVDVENLIVCQPDNGEMALEIADRMCRSGAVDLICIDSVSALTPRAEIEGEIGM 836
            AYSK+LGVD+ENLIVCQPDNGEMALEIADRMCRSGA+DLICIDSVSALTPRAEIEGEIGM
Sbjct: 161  AYSKALGVDIENLIVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGEIGM 220

Query: 837  QQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASV 1016
            QQMGLQARLMSQALRKMSGNASKAGCTL+FLNQIRYKIGV+YGNPEVTSGGIALKFFASV
Sbjct: 221  QQMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASV 280

Query: 1017 RLEIRPIGKIKSVKGDEDIGLXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAE 1196
            RLEIR IGKIKS KGDED+G+             PYKQAEFEIIFGEGVSKLGC+LDCAE
Sbjct: 281  RLEIRLIGKIKSAKGDEDVGVKVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAE 340

Query: 1197 MADIVLKKGSWYSYGDHRLGQGRERALQYLRENPKISEEIEKMVRPMMVEGGGQLA 1364
            + D+V KKGSWYSY D RLGQGRE+ALQYLRE+P   +EIEK+VR M+ EG   ++
Sbjct: 341  LMDVVAKKGSWYSYKDIRLGQGREKALQYLRESPTTCDEIEKVVRAMIPEGSRHMS 396


>ref|XP_006301561.1| hypothetical protein CARUB_v10021995mg [Capsella rubella]
            gi|482570271|gb|EOA34459.1| hypothetical protein
            CARUB_v10021995mg [Capsella rubella]
          Length = 434

 Score =  585 bits (1508), Expect = e-164
 Identities = 298/368 (80%), Positives = 325/368 (88%), Gaps = 5/368 (1%)
 Frame = +3

Query: 261  SSYSQLKKHHVAVKPIR--VRSEF---VNGALSADSDPRFIDRQKALEAAMNDINNSFGK 425
            S YS+     VA K +   + SEF   +NGALS D+D RF+DRQKALEAAMNDIN+SFGK
Sbjct: 37   SCYSRRLYSQVAAKKLNHNISSEFDDRINGALSPDADSRFLDRQKALEAAMNDINSSFGK 96

Query: 426  GSVTRLGSAGGALVETFPSGCLTLDFALGGGIPKGRIVEIYGPESSGKTTLALHAIAEVQ 605
            GSVTRLGSAGGALVETFPSG LTLD ALGGG+PKGR+VEIYGPESSGKTTLALHAIAEVQ
Sbjct: 97   GSVTRLGSAGGALVETFPSGILTLDLALGGGLPKGRVVEIYGPESSGKTTLALHAIAEVQ 156

Query: 606  RLGGNAMLVDAEHAFDPAYSKSLGVDVENLIVCQPDNGEMALEIADRMCRSGAVDLICID 785
            +LGGNAMLVDAEHAFDP+YSK+LGVDVENLIVCQPDNGEMALE ADRMCRSGAVDLIC+D
Sbjct: 157  KLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALETADRMCRSGAVDLICVD 216

Query: 786  SVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYG 965
            SVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYG
Sbjct: 217  SVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYG 276

Query: 966  NPEVTSGGIALKFFASVRLEIRPIGKIKSVKGDEDIGLXXXXXXXXXXXXXPYKQAEFEI 1145
            NPEVTSGGIALKFFASVRLEIR  GKIKS KGDEDIGL             PY+QAEFEI
Sbjct: 277  NPEVTSGGIALKFFASVRLEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYRQAEFEI 336

Query: 1146 IFGEGVSKLGCILDCAEMADIVLKKGSWYSYGDHRLGQGRERALQYLRENPKISEEIEKM 1325
            +FGEGV+KLGC+LDCAE+ ++VLKKGSWYSY D RLGQGRE+ALQ+LRENP + E+IEK 
Sbjct: 337  MFGEGVNKLGCVLDCAEIMEVVLKKGSWYSYEDQRLGQGREKALQHLRENPSLQEDIEKK 396

Query: 1326 VRPMMVEG 1349
            VR +M++G
Sbjct: 397  VRLLMLDG 404


>ref|XP_006477998.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Citrus sinensis]
          Length = 440

 Score =  585 bits (1507), Expect = e-164
 Identities = 292/348 (83%), Positives = 315/348 (90%)
 Frame = +3

Query: 327  VNGALSADSDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDFA 506
            VNG  S   D RF+DRQ+AL+AAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLD A
Sbjct: 76   VNGFSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLA 135

Query: 507  LGGGIPKGRIVEIYGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFDPAYSKSLGVDV 686
            LGGG+PKGRIVEI+GPESSGKTTLALHAIAEVQ+LGGNAMLVDAEHAFDPAYSK+LGVDV
Sbjct: 136  LGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDV 195

Query: 687  ENLIVCQPDNGEMALEIADRMCRSGAVDLICIDSVSALTPRAEIEGEIGMQQMGLQARLM 866
            ENLIVCQPDNGEMALEIADRMCRSGA+DLIC+DSVSALTPRAEIEGEIGMQQ+GLQARLM
Sbjct: 196  ENLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLM 255

Query: 867  SQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRPIGKI 1046
            SQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIR  GKI
Sbjct: 256  SQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKI 315

Query: 1047 KSVKGDEDIGLXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAEMADIVLKKGS 1226
            KSVKGDED+G+             PYKQAEFEIIFGEGVSKLGC+LDCAEM DIV++KG+
Sbjct: 316  KSVKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGA 375

Query: 1227 WYSYGDHRLGQGRERALQYLRENPKISEEIEKMVRPMMVEGGGQLASF 1370
            WYSYGD RLGQGR++ALQYLR+NP + EEIEK+VR MM +G     SF
Sbjct: 376  WYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSF 423