BLASTX nr result

ID: Catharanthus22_contig00012161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00012161
         (552 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269036.2| PREDICTED: zinc finger protein MAGPIE [Vitis...    62   7e-08
emb|CBI32240.3| unnamed protein product [Vitis vinifera]               62   9e-08
ref|XP_006386760.1| hypothetical protein POPTR_0002s20950g [Popu...    59   1e-06

>ref|XP_002269036.2| PREDICTED: zinc finger protein MAGPIE [Vitis vinifera]
          Length = 570

 Score = 62.4 bits (150), Expect = 7e-08
 Identities = 48/140 (34%), Positives = 62/140 (44%), Gaps = 5/140 (3%)
 Frame = +3

Query: 3   LFESGSGNSSAMNDLGMFGGILMGST-----AEQFNENDHIGLMPPAAGRGSMNRIGSPA 167
           LF++ SG++S  ND+GMFG + +G        +     D       A GR  M R    +
Sbjct: 440 LFQTVSGSASMNNDIGMFGNVFIGGDQNSPFLKNMENEDSSSTSSLAQGRTVMAR----S 495

Query: 168 VVXXXXXXXXXXXXDVMTVDFLGIGGGSIRPQNLHXXXXXXXXXXXXXXHRMQVMNPFHQ 347
                         DV T+D LG+GG   RP NL               HRMQ M  F Q
Sbjct: 496 ATGPSRFGGNGEGKDVTTLDLLGVGGS--RPVNLQ-EQQQRLELEAMSQHRMQAMTTFQQ 552

Query: 348 QLSHGIGEPPIEKPLWDV*E 407
           QLSH  GEP IE+ L+ + E
Sbjct: 553 QLSH--GEPAIEQGLYGIYE 570


>emb|CBI32240.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score = 62.0 bits (149), Expect = 9e-08
 Identities = 47/138 (34%), Positives = 61/138 (44%), Gaps = 5/138 (3%)
 Frame = +3

Query: 3   LFESGSGNSSAMNDLGMFGGILMGST-----AEQFNENDHIGLMPPAAGRGSMNRIGSPA 167
           LF++ SG++S  ND+GMFG + +G        +     D       A GR  M R    +
Sbjct: 277 LFQTVSGSASMNNDIGMFGNVFIGGDQNSPFLKNMENEDSSSTSSLAQGRTVMAR----S 332

Query: 168 VVXXXXXXXXXXXXDVMTVDFLGIGGGSIRPQNLHXXXXXXXXXXXXXXHRMQVMNPFHQ 347
                         DV T+D LG+GG   RP NL               HRMQ M  F Q
Sbjct: 333 ATGPSRFGGNGEGKDVTTLDLLGVGGS--RPVNLQ-EQQQRLELEAMSQHRMQAMTTFQQ 389

Query: 348 QLSHGIGEPPIEKPLWDV 401
           QLSH  GEP IE+ L+ +
Sbjct: 390 QLSH--GEPAIEQGLYGI 405


>ref|XP_006386760.1| hypothetical protein POPTR_0002s20950g [Populus trichocarpa]
           gi|550345494|gb|ERP64557.1| hypothetical protein
           POPTR_0002s20950g [Populus trichocarpa]
          Length = 600

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 45/146 (30%), Positives = 61/146 (41%), Gaps = 13/146 (8%)
 Frame = +3

Query: 3   LFESGSGNSSAMNDLGMFGGILMGSTAE-------QFNENDHIGLMPPAAGRGSMNRIGS 161
           +F++    SSAMND+ MF  + M +          +  ++ + GLM         N  G 
Sbjct: 462 IFDTAGTGSSAMNDMAMFASMFMSNDQNPGFIKNMEQEDSGNSGLMHGRNALMERNPTGP 521

Query: 162 PAVVXXXXXXXXXXXXDVMTVDFLGIGGGSIRPQNLHXXXXXXXXXXXXXX----HRMQV 329
                           D+MT DF+GIGG   RP N                     RMQ+
Sbjct: 522 SRFAGTPIEGG-----DMMTRDFMGIGGA--RPTNFQDQQQQHQPRLEMEAMSQHQRMQM 574

Query: 330 MNPFHQQLSHGIGEPPIEKP--LWDV 401
           MNP+HQQ    + EP IEKP  +WDV
Sbjct: 575 MNPYHQQQQPSLREPAIEKPSSIWDV 600


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