BLASTX nr result
ID: Catharanthus22_contig00012161
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus22_contig00012161 (552 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002269036.2| PREDICTED: zinc finger protein MAGPIE [Vitis... 62 7e-08 emb|CBI32240.3| unnamed protein product [Vitis vinifera] 62 9e-08 ref|XP_006386760.1| hypothetical protein POPTR_0002s20950g [Popu... 59 1e-06 >ref|XP_002269036.2| PREDICTED: zinc finger protein MAGPIE [Vitis vinifera] Length = 570 Score = 62.4 bits (150), Expect = 7e-08 Identities = 48/140 (34%), Positives = 62/140 (44%), Gaps = 5/140 (3%) Frame = +3 Query: 3 LFESGSGNSSAMNDLGMFGGILMGST-----AEQFNENDHIGLMPPAAGRGSMNRIGSPA 167 LF++ SG++S ND+GMFG + +G + D A GR M R + Sbjct: 440 LFQTVSGSASMNNDIGMFGNVFIGGDQNSPFLKNMENEDSSSTSSLAQGRTVMAR----S 495 Query: 168 VVXXXXXXXXXXXXDVMTVDFLGIGGGSIRPQNLHXXXXXXXXXXXXXXHRMQVMNPFHQ 347 DV T+D LG+GG RP NL HRMQ M F Q Sbjct: 496 ATGPSRFGGNGEGKDVTTLDLLGVGGS--RPVNLQ-EQQQRLELEAMSQHRMQAMTTFQQ 552 Query: 348 QLSHGIGEPPIEKPLWDV*E 407 QLSH GEP IE+ L+ + E Sbjct: 553 QLSH--GEPAIEQGLYGIYE 570 >emb|CBI32240.3| unnamed protein product [Vitis vinifera] Length = 423 Score = 62.0 bits (149), Expect = 9e-08 Identities = 47/138 (34%), Positives = 61/138 (44%), Gaps = 5/138 (3%) Frame = +3 Query: 3 LFESGSGNSSAMNDLGMFGGILMGST-----AEQFNENDHIGLMPPAAGRGSMNRIGSPA 167 LF++ SG++S ND+GMFG + +G + D A GR M R + Sbjct: 277 LFQTVSGSASMNNDIGMFGNVFIGGDQNSPFLKNMENEDSSSTSSLAQGRTVMAR----S 332 Query: 168 VVXXXXXXXXXXXXDVMTVDFLGIGGGSIRPQNLHXXXXXXXXXXXXXXHRMQVMNPFHQ 347 DV T+D LG+GG RP NL HRMQ M F Q Sbjct: 333 ATGPSRFGGNGEGKDVTTLDLLGVGGS--RPVNLQ-EQQQRLELEAMSQHRMQAMTTFQQ 389 Query: 348 QLSHGIGEPPIEKPLWDV 401 QLSH GEP IE+ L+ + Sbjct: 390 QLSH--GEPAIEQGLYGI 405 >ref|XP_006386760.1| hypothetical protein POPTR_0002s20950g [Populus trichocarpa] gi|550345494|gb|ERP64557.1| hypothetical protein POPTR_0002s20950g [Populus trichocarpa] Length = 600 Score = 58.5 bits (140), Expect = 1e-06 Identities = 45/146 (30%), Positives = 61/146 (41%), Gaps = 13/146 (8%) Frame = +3 Query: 3 LFESGSGNSSAMNDLGMFGGILMGSTAE-------QFNENDHIGLMPPAAGRGSMNRIGS 161 +F++ SSAMND+ MF + M + + ++ + GLM N G Sbjct: 462 IFDTAGTGSSAMNDMAMFASMFMSNDQNPGFIKNMEQEDSGNSGLMHGRNALMERNPTGP 521 Query: 162 PAVVXXXXXXXXXXXXDVMTVDFLGIGGGSIRPQNLHXXXXXXXXXXXXXX----HRMQV 329 D+MT DF+GIGG RP N RMQ+ Sbjct: 522 SRFAGTPIEGG-----DMMTRDFMGIGGA--RPTNFQDQQQQHQPRLEMEAMSQHQRMQM 574 Query: 330 MNPFHQQLSHGIGEPPIEKP--LWDV 401 MNP+HQQ + EP IEKP +WDV Sbjct: 575 MNPYHQQQQPSLREPAIEKPSSIWDV 600