BLASTX nr result

ID: Catharanthus22_contig00012108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00012108
         (429 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006357627.1| PREDICTED: uncharacterized protein LOC102590...    72   6e-11
ref|XP_006367900.1| PREDICTED: agamous-like MADS-box protein AGL...    59   7e-07
gb|AAX95761.1| SRF-type transcription factor family protein [Sol...    59   9e-07
ref|XP_006365206.1| PREDICTED: uncharacterized protein LOC102595...    58   1e-06
ref|XP_006349351.1| PREDICTED: uncharacterized protein LOC102598...    58   1e-06
ref|NP_188495.1| protein agamous-like 103 [Arabidopsis thaliana]...    57   2e-06
ref|XP_003621328.1| Type I MADS box transcription factor [Medica...    57   2e-06
ref|XP_006361194.1| PREDICTED: uncharacterized protein LOC102583...    57   3e-06
ref|XP_006365204.1| PREDICTED: uncharacterized protein LOC102595...    56   4e-06
ref|XP_006491544.1| PREDICTED: MADS-box protein JOINTLESS-like i...    56   6e-06
ref|XP_006850973.1| hypothetical protein AMTR_s00025p00207310 [A...    56   6e-06
ref|XP_002311944.2| hypothetical protein POPTR_0008s02120g [Popu...    55   7e-06
gb|AEF32134.1| MADS-box protein, partial [Betula platyphylla]          55   7e-06
ref|XP_002531416.1| mads box protein, putative [Ricinus communis...    55   9e-06

>ref|XP_006357627.1| PREDICTED: uncharacterized protein LOC102590916 [Solanum tuberosum]
          Length = 219

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 32/68 (47%), Positives = 47/68 (69%)
 Frame = -3

Query: 238 LSFRKGKETIKRKAKELSILCDIPVCALITSPINGEIETWPESPSELKTIFQMYREKFQF 59
           L+++K KETIK+K +ELSILCDI  C ++  P +GE++TWPE+P++   I Q Y+E    
Sbjct: 10  LNYKKKKETIKKKTRELSILCDIKACVILVDP-DGEVDTWPENPTDFNPIIQSYKENLFH 68

Query: 58  FDRQRYAD 35
             R+R  D
Sbjct: 69  GKRKRIDD 76


>ref|XP_006367900.1| PREDICTED: agamous-like MADS-box protein AGL86-like [Solanum
           tuberosum]
          Length = 130

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 25/58 (43%), Positives = 40/58 (68%)
 Frame = -3

Query: 235 SFRKGKETIKRKAKELSILCDIPVCALITSPINGEIETWPESPSELKTIFQMYREKFQ 62
           ++++ KE IKRK+ EL+ LCDI VC +IT P NGE++TWP++    K +  +Y +  +
Sbjct: 16  TYQERKECIKRKSMELATLCDIKVCTVITGP-NGELQTWPDNLDACKEVLDLYSQNLK 72


>gb|AAX95761.1| SRF-type transcription factor family protein [Solanum lycopersicum]
          Length = 130

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 27/64 (42%), Positives = 39/64 (60%)
 Frame = -3

Query: 253 RQRRSLSFRKGKETIKRKAKELSILCDIPVCALITSPINGEIETWPESPSELKTIFQMYR 74
           R     S++  KE IKRK+ EL+ LCDI VC +IT P NGE++TWP+     K +  +Y 
Sbjct: 10  RTNNPKSYQVRKECIKRKSMELATLCDIKVCTVITGP-NGELQTWPDDFDACKQVLDLYS 68

Query: 73  EKFQ 62
           +  +
Sbjct: 69  QNLK 72


>ref|XP_006365206.1| PREDICTED: uncharacterized protein LOC102595746 [Solanum tuberosum]
          Length = 262

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 25/58 (43%), Positives = 40/58 (68%)
 Frame = -3

Query: 235 SFRKGKETIKRKAKELSILCDIPVCALITSPINGEIETWPESPSELKTIFQMYREKFQ 62
           S+++ KE IKRK+ +L+ LCDI VC +ITSP NGE++TWP++      +  +Y +  +
Sbjct: 16  SYQERKECIKRKSMKLATLCDIKVCTVITSP-NGELQTWPDNLDAYNEVLDLYSQNLK 72


>ref|XP_006349351.1| PREDICTED: uncharacterized protein LOC102598839 [Solanum tuberosum]
          Length = 139

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 25/58 (43%), Positives = 39/58 (67%)
 Frame = -3

Query: 235 SFRKGKETIKRKAKELSILCDIPVCALITSPINGEIETWPESPSELKTIFQMYREKFQ 62
           S++  KE IKRK+ EL+ LCDI VC +IT P NG+++TWP++    K +  +Y +  +
Sbjct: 24  SYQVRKECIKRKSMELATLCDIKVCTVITGP-NGQLQTWPDNLDACKEVLDLYSQNLK 80


>ref|NP_188495.1| protein agamous-like 103 [Arabidopsis thaliana]
           gi|9293888|dbj|BAB01791.1| unnamed protein product
           [Arabidopsis thaliana] gi|119360153|gb|ABL66805.1|
           At3g18650 [Arabidopsis thaliana]
           gi|332642605|gb|AEE76126.1| protein agamous-like 103
           [Arabidopsis thaliana]
          Length = 386

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/58 (50%), Positives = 40/58 (68%)
 Frame = -3

Query: 244 RSLSFRKGKETIKRKAKELSILCDIPVCALITSPINGEIETWPESPSELKTIFQMYRE 71
           R+ S  K ++T+ +KAKELSILCDI VC +I    NGE++TWPE   ++K I + Y E
Sbjct: 32  RATSLIKRQQTVFKKAKELSILCDIDVC-VICYGSNGELKTWPEEREKVKAIARRYGE 88


>ref|XP_003621328.1| Type I MADS box transcription factor [Medicago truncatula]
           gi|355496343|gb|AES77546.1| Type I MADS box
           transcription factor [Medicago truncatula]
          Length = 159

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/66 (37%), Positives = 42/66 (63%)
 Frame = -3

Query: 244 RSLSFRKGKETIKRKAKELSILCDIPVCALITSPINGEIETWPESPSELKTIFQMYREKF 65
           R  S++K K+TI +K +EL+ILC IP CA+I+ P + + E WP +  E K + + Y+  +
Sbjct: 17  RKASYKKRKKTIIKKVRELTILCGIPACAIISDPFDSKTEVWP-NLKEAKQVIERYQNSY 75

Query: 64  QFFDRQ 47
              +R+
Sbjct: 76  MKDERK 81


>ref|XP_006361194.1| PREDICTED: uncharacterized protein LOC102583257 [Solanum tuberosum]
          Length = 131

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/58 (43%), Positives = 38/58 (65%)
 Frame = -3

Query: 235 SFRKGKETIKRKAKELSILCDIPVCALITSPINGEIETWPESPSELKTIFQMYREKFQ 62
           S++  KE IKRK+ EL+ LCDI VC +I  P NGE++TWP++    K +  +Y +  +
Sbjct: 16  SYQVRKECIKRKSMELATLCDIKVCTVIIGP-NGELQTWPDNLDACKEVLDLYSQNLK 72


>ref|XP_006365204.1| PREDICTED: uncharacterized protein LOC102595092 [Solanum tuberosum]
          Length = 131

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 25/53 (47%), Positives = 35/53 (66%)
 Frame = -3

Query: 220 KETIKRKAKELSILCDIPVCALITSPINGEIETWPESPSELKTIFQMYREKFQ 62
           KE IKRK+ EL  LCDI VC +IT P NGE++TWP++    K +  +Y +  +
Sbjct: 21  KECIKRKSMELENLCDIKVCTVITGP-NGELQTWPDNLDACKEVLDLYSQNLK 72


>ref|XP_006491544.1| PREDICTED: MADS-box protein JOINTLESS-like isoform X1 [Citrus
           sinensis] gi|568876996|ref|XP_006491545.1| PREDICTED:
           MADS-box protein JOINTLESS-like isoform X2 [Citrus
           sinensis] gi|568876998|ref|XP_006491546.1| PREDICTED:
           MADS-box protein JOINTLESS-like isoform X3 [Citrus
           sinensis]
          Length = 287

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/58 (43%), Positives = 37/58 (63%)
 Frame = -3

Query: 244 RSLSFRKGKETIKRKAKELSILCDIPVCALITSPINGEIETWPESPSELKTIFQMYRE 71
           R  +F K KET+K KA EL  LCD+ VC +   P +G++ETWPE  +++  +   Y+E
Sbjct: 26  RQGNFEKRKETLKNKAHELETLCDVMVCLVCYGP-DGKVETWPEDKTKVNDMIDKYKE 82


>ref|XP_006850973.1| hypothetical protein AMTR_s00025p00207310 [Amborella trichopoda]
           gi|548854644|gb|ERN12554.1| hypothetical protein
           AMTR_s00025p00207310 [Amborella trichopoda]
          Length = 328

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/57 (45%), Positives = 37/57 (64%)
 Frame = -3

Query: 247 RRSLSFRKGKETIKRKAKELSILCDIPVCALITSPINGEIETWPESPSELKTIFQMY 77
           +R+ +FRK K+ +K+KA E SILC +  C +  SP NG++ETWPE  S    + Q Y
Sbjct: 6   QRNDTFRKRKKGLKKKASEFSILCGVDTCLVSFSP-NGDLETWPEDKSACMNVVQRY 61


>ref|XP_002311944.2| hypothetical protein POPTR_0008s02120g [Populus trichocarpa]
           gi|550332213|gb|EEE89311.2| hypothetical protein
           POPTR_0008s02120g [Populus trichocarpa]
          Length = 203

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 23/59 (38%), Positives = 37/59 (62%)
 Frame = -3

Query: 250 QRRSLSFRKGKETIKRKAKELSILCDIPVCALITSPINGEIETWPESPSELKTIFQMYR 74
           +R + S+   K T+K+K +EL+ILCD+PVC +   P +G  ETWPE    +  + + Y+
Sbjct: 7   KRTTKSYEDRKNTLKKKTRELAILCDVPVCLICVDP-DGTTETWPEEKERVVDVLKAYK 64


>gb|AEF32134.1| MADS-box protein, partial [Betula platyphylla]
          Length = 166

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/54 (44%), Positives = 38/54 (70%)
 Frame = -3

Query: 235 SFRKGKETIKRKAKELSILCDIPVCALITSPINGEIETWPESPSELKTIFQMYR 74
           ++R+   T+K+KA EL+ LC+IPVC +   P +G +ETWPES  +++ I + YR
Sbjct: 22  TYRRRNPTLKKKALELAELCNIPVCVISYGP-DGTVETWPESREDVEAIIEKYR 74


>ref|XP_002531416.1| mads box protein, putative [Ricinus communis]
           gi|223528966|gb|EEF30958.1| mads box protein, putative
           [Ricinus communis]
          Length = 330

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 24/57 (42%), Positives = 35/57 (61%)
 Frame = -3

Query: 244 RSLSFRKGKETIKRKAKELSILCDIPVCALITSPINGEIETWPESPSELKTIFQMYR 74
           ++ SF K K T+K+KA+EL  LCD+PVC +   P NG ++ WPE     K +   Y+
Sbjct: 43  KTASFYKRKPTLKKKAQELHTLCDVPVCVVCFGP-NGSVDVWPEEEQCAKELMMSYK 98


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