BLASTX nr result
ID: Catharanthus22_contig00011965
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00011965
(286 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ07316.1| hypothetical protein PRUPE_ppa013072mg [Prunus pe... 99 8e-19
ref|XP_002319038.2| hypothetical protein POPTR_0013s02990g [Popu... 96 4e-18
ref|XP_004302471.1| PREDICTED: probable histone H2AXa-like [Frag... 96 4e-18
ref|XP_002328535.1| histone 2 [Populus trichocarpa] gi|566169383... 96 6e-18
ref|XP_006417635.1| hypothetical protein EUTSA_v10008780mg [Eutr... 94 2e-17
gb|EXB93885.1| Histone H2AX [Morus notabilis] 92 9e-17
ref|XP_002265878.1| PREDICTED: histone H2AX [Vitis vinifera] gi|... 92 9e-17
ref|XP_003626340.1| Histone H2A [Medicago truncatula] gi|3575121... 91 1e-16
gb|EOX94904.1| Gamma histone variant H2AX [Theobroma cacao] 91 2e-16
ref|NP_175868.1| gamma histone variant H2AX [Arabidopsis thalian... 90 3e-16
ref|XP_006433236.1| hypothetical protein CICLE_v10002804mg [Citr... 90 3e-16
ref|XP_004135645.1| PREDICTED: probable histone H2AXb-like [Cucu... 90 3e-16
ref|XP_003625881.1| Histone H2A [Medicago truncatula] gi|3555008... 90 3e-16
ref|XP_002894599.1| hypothetical protein ARALYDRAFT_337754 [Arab... 90 3e-16
ref|XP_002868724.1| hypothetical protein ARALYDRAFT_916372 [Arab... 90 3e-16
ref|NP_001235770.1| uncharacterized protein LOC100305465 [Glycin... 90 3e-16
ref|XP_002512309.1| histone h2a, putative [Ricinus communis] gi|... 90 3e-16
gb|EXC34660.1| Histone H2AX [Morus notabilis] 90 4e-16
ref|XP_002892475.1| hypothetical protein ARALYDRAFT_888122 [Arab... 90 4e-16
ref|XP_002520711.1| histone h2a, putative [Ricinus communis] gi|... 90 4e-16
>gb|EMJ07316.1| hypothetical protein PRUPE_ppa013072mg [Prunus persica]
Length = 141
Score = 98.6 bits (244), Expect = 8e-19
Identities = 50/68 (73%), Positives = 54/68 (79%)
Frame = +3
Query: 81 MSSKETGASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSA 260
MSSKE G++KGGRG AGLQFPVGRIARFLKAGKYAER+G+GAPVYLSA
Sbjct: 1 MSSKEAGSTKGGRGKPKASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSA 60
Query: 261 VLEYLAAE 284
VLEYLAAE
Sbjct: 61 VLEYLAAE 68
>ref|XP_002319038.2| hypothetical protein POPTR_0013s02990g [Populus trichocarpa]
gi|550324815|gb|EEE94961.2| hypothetical protein
POPTR_0013s02990g [Populus trichocarpa]
Length = 185
Score = 96.3 bits (238), Expect = 4e-18
Identities = 52/70 (74%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
Frame = +3
Query: 78 KMSSKETGAS-KGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYL 254
KMSSKE GAS KGGRG AGLQFPVGRIARFLKAGKYAER+G+GAPVYL
Sbjct: 43 KMSSKEGGASTKGGRGKPKASKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYL 102
Query: 255 SAVLEYLAAE 284
+AVLEYLAAE
Sbjct: 103 AAVLEYLAAE 112
>ref|XP_004302471.1| PREDICTED: probable histone H2AXa-like [Fragaria vesca subsp.
vesca]
Length = 141
Score = 96.3 bits (238), Expect = 4e-18
Identities = 48/68 (70%), Positives = 54/68 (79%)
Frame = +3
Query: 81 MSSKETGASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSA 260
MS KE+G++KGGRG AGLQFPVGRIARFLK+GKYAER+G+GAPVYLSA
Sbjct: 1 MSGKESGSTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSA 60
Query: 261 VLEYLAAE 284
VLEYLAAE
Sbjct: 61 VLEYLAAE 68
>ref|XP_002328535.1| histone 2 [Populus trichocarpa] gi|566169383|ref|XP_006382663.1|
histone H2A family protein [Populus trichocarpa]
gi|566256156|ref|XP_006388063.1| hypothetical protein
POPTR_0369s00210g [Populus trichocarpa]
gi|550309370|gb|ERP46977.1| hypothetical protein
POPTR_0369s00210g [Populus trichocarpa]
gi|550338028|gb|ERP60460.1| histone H2A family protein
[Populus trichocarpa]
Length = 142
Score = 95.5 bits (236), Expect = 6e-18
Identities = 52/69 (75%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = +3
Query: 81 MSSKETGAS-KGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLS 257
MSSKE GAS KGGRG AGLQFPVGRIARFLKAGKYAER+G+GAPVYLS
Sbjct: 1 MSSKEGGASTKGGRGKPKASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLS 60
Query: 258 AVLEYLAAE 284
AVLEYLAAE
Sbjct: 61 AVLEYLAAE 69
>ref|XP_006417635.1| hypothetical protein EUTSA_v10008780mg [Eutrema salsugineum]
gi|557095406|gb|ESQ35988.1| hypothetical protein
EUTSA_v10008780mg [Eutrema salsugineum]
Length = 207
Score = 94.0 bits (232), Expect = 2e-17
Identities = 48/77 (62%), Positives = 55/77 (71%)
Frame = +3
Query: 54 HSVSPQRKKMSSKETGASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIG 233
+S S + K + +G +KGGRG AGLQFPVGRIARFLKAGKYAER+G
Sbjct: 58 YSASKETKMSTGAGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVG 117
Query: 234 SGAPVYLSAVLEYLAAE 284
+GAPVYLSAVLEYLAAE
Sbjct: 118 AGAPVYLSAVLEYLAAE 134
>gb|EXB93885.1| Histone H2AX [Morus notabilis]
Length = 141
Score = 91.7 bits (226), Expect = 9e-17
Identities = 47/68 (69%), Positives = 50/68 (73%)
Frame = +3
Query: 81 MSSKETGASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSA 260
MSS G++KGGRG AGLQFPVGRIARFLK GKYAER+G GAPVYLSA
Sbjct: 1 MSSTVAGSTKGGRGKPKASKSVSRSSKAGLQFPVGRIARFLKVGKYAERVGGGAPVYLSA 60
Query: 261 VLEYLAAE 284
VLEYLAAE
Sbjct: 61 VLEYLAAE 68
>ref|XP_002265878.1| PREDICTED: histone H2AX [Vitis vinifera]
gi|147815277|emb|CAN70026.1| hypothetical protein
VITISV_030174 [Vitis vinifera]
Length = 139
Score = 91.7 bits (226), Expect = 9e-17
Identities = 46/63 (73%), Positives = 50/63 (79%)
Frame = +3
Query: 96 TGASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSAVLEYL 275
TG++KGGRG AGLQFPVGRIARFLKAGKYAER+G+GAPVYLSAVLEYL
Sbjct: 4 TGSTKGGRGKPKASKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYL 63
Query: 276 AAE 284
AAE
Sbjct: 64 AAE 66
>ref|XP_003626340.1| Histone H2A [Medicago truncatula] gi|357512107|ref|XP_003626342.1|
Histone H2A [Medicago truncatula]
gi|124360158|gb|ABN08174.1| Histone H2A; Histone-fold
[Medicago truncatula] gi|124360160|gb|ABN08176.1|
Histone H2A; Histone-fold [Medicago truncatula]
gi|355501355|gb|AES82558.1| Histone H2A [Medicago
truncatula] gi|355501357|gb|AES82560.1| Histone H2A
[Medicago truncatula] gi|388498640|gb|AFK37386.1|
unknown [Medicago truncatula]
Length = 139
Score = 91.3 bits (225), Expect = 1e-16
Identities = 46/63 (73%), Positives = 49/63 (77%)
Frame = +3
Query: 96 TGASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSAVLEYL 275
TG +KGGRG AGLQFPVGRIARFLKAGKYAER+G+GAPVYLSAVLEYL
Sbjct: 4 TGTTKGGRGKPKAAKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYL 63
Query: 276 AAE 284
AAE
Sbjct: 64 AAE 66
>gb|EOX94904.1| Gamma histone variant H2AX [Theobroma cacao]
Length = 139
Score = 90.5 bits (223), Expect = 2e-16
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +3
Query: 96 TGASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSAVLEYL 275
TG++KGGRG AGLQFPVGRIARFLKAGKYA+R+G+GAPVYLSAVLEYL
Sbjct: 4 TGSTKGGRGKPKSSKSVSRSQKAGLQFPVGRIARFLKAGKYADRVGAGAPVYLSAVLEYL 63
Query: 276 AAE 284
AAE
Sbjct: 64 AAE 66
>ref|NP_175868.1| gamma histone variant H2AX [Arabidopsis thaliana]
gi|567130275|ref|XP_006392493.1| hypothetical protein
EUTSA_v10023750mg [Eutrema salsugineum]
gi|75313113|sp|Q9S9K7.1|H2AXB_ARATH RecName:
Full=Probable histone H2AXb; AltName: Full=HTA3
gi|15724172|gb|AAL06478.1|AF411788_1 At1g54690/T22H22_12
[Arabidopsis thaliana] gi|3776566|gb|AAC64883.1| Strong
similarity to histone H2A gb|AJ006768 from Cicer
arietinum [Arabidopsis thaliana]
gi|20334846|gb|AAM16179.1| At1g54690/T22H22_12
[Arabidopsis thaliana] gi|21553797|gb|AAM62890.1|
histone H2A, putative [Arabidopsis thaliana]
gi|332195014|gb|AEE33135.1| gamma histone variant H2AX
[Arabidopsis thaliana] gi|557088999|gb|ESQ29779.1|
hypothetical protein EUTSA_v10023750mg [Eutrema
salsugineum]
Length = 142
Score = 90.1 bits (222), Expect = 3e-16
Identities = 46/67 (68%), Positives = 50/67 (74%)
Frame = +3
Query: 84 SSKETGASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSAV 263
S +G +KGGRG AGLQFPVGRIARFLKAGKYAER+G+GAPVYLSAV
Sbjct: 3 SGAGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 62
Query: 264 LEYLAAE 284
LEYLAAE
Sbjct: 63 LEYLAAE 69
>ref|XP_006433236.1| hypothetical protein CICLE_v10002804mg [Citrus clementina]
gi|568835787|ref|XP_006471940.1| PREDICTED: histone
H2AX-like [Citrus sinensis] gi|557535358|gb|ESR46476.1|
hypothetical protein CICLE_v10002804mg [Citrus
clementina]
Length = 140
Score = 90.1 bits (222), Expect = 3e-16
Identities = 46/66 (69%), Positives = 50/66 (75%)
Frame = +3
Query: 87 SKETGASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSAVL 266
S G++KGGRG AGLQFPVGRIARFLKAGKYAER+G+GAPVYLSAVL
Sbjct: 2 SSTGGSTKGGRGKPKASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVL 61
Query: 267 EYLAAE 284
EYLAAE
Sbjct: 62 EYLAAE 67
>ref|XP_004135645.1| PREDICTED: probable histone H2AXb-like [Cucumis sativus]
gi|449485770|ref|XP_004157270.1| PREDICTED: probable
histone H2AXb-like [Cucumis sativus]
Length = 140
Score = 90.1 bits (222), Expect = 3e-16
Identities = 46/66 (69%), Positives = 50/66 (75%)
Frame = +3
Query: 87 SKETGASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSAVL 266
S G++KGGRG AGLQFPVGRIARFLKAGKYAER+G+GAPVYLSAVL
Sbjct: 2 SSTGGSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVL 61
Query: 267 EYLAAE 284
EYLAAE
Sbjct: 62 EYLAAE 67
>ref|XP_003625881.1| Histone H2A [Medicago truncatula] gi|355500896|gb|AES82099.1|
Histone H2A [Medicago truncatula]
gi|388495504|gb|AFK35818.1| unknown [Medicago
truncatula]
Length = 142
Score = 90.1 bits (222), Expect = 3e-16
Identities = 49/69 (71%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Frame = +3
Query: 81 MSSK-ETGASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLS 257
MSSK T +KGGRG AGLQFPVGRIARFLKAGKYAER+G+GAPVYLS
Sbjct: 1 MSSKGATTTTKGGRGKPKASKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLS 60
Query: 258 AVLEYLAAE 284
AVLEYLAAE
Sbjct: 61 AVLEYLAAE 69
>ref|XP_002894599.1| hypothetical protein ARALYDRAFT_337754 [Arabidopsis lyrata subsp.
lyrata] gi|297340441|gb|EFH70858.1| hypothetical protein
ARALYDRAFT_337754 [Arabidopsis lyrata subsp. lyrata]
Length = 209
Score = 90.1 bits (222), Expect = 3e-16
Identities = 46/67 (68%), Positives = 50/67 (74%)
Frame = +3
Query: 84 SSKETGASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSAV 263
S +G +KGGRG AGLQFPVGRIARFLKAGKYAER+G+GAPVYLSAV
Sbjct: 3 SGAGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 62
Query: 264 LEYLAAE 284
LEYLAAE
Sbjct: 63 LEYLAAE 69
>ref|XP_002868724.1| hypothetical protein ARALYDRAFT_916372 [Arabidopsis lyrata subsp.
lyrata] gi|297314560|gb|EFH44983.1| hypothetical protein
ARALYDRAFT_916372 [Arabidopsis lyrata subsp. lyrata]
Length = 142
Score = 90.1 bits (222), Expect = 3e-16
Identities = 46/67 (68%), Positives = 50/67 (74%)
Frame = +3
Query: 84 SSKETGASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSAV 263
S +G +KGGRG AGLQFPVGRIARFLKAGKYAER+G+GAPVYLSAV
Sbjct: 3 SGAGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 62
Query: 264 LEYLAAE 284
LEYLAAE
Sbjct: 63 LEYLAAE 69
>ref|NP_001235770.1| uncharacterized protein LOC100305465 [Glycine max]
gi|255625587|gb|ACU13138.1| unknown [Glycine max]
gi|561020316|gb|ESW19087.1| hypothetical protein
PHAVU_006G095800g [Phaseolus vulgaris]
Length = 140
Score = 90.1 bits (222), Expect = 3e-16
Identities = 46/66 (69%), Positives = 50/66 (75%)
Frame = +3
Query: 87 SKETGASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSAVL 266
S G++KGGRG AGLQFPVGRIARFLKAGKYAER+G+GAPVYLSAVL
Sbjct: 2 SSTGGSTKGGRGKPKASKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVL 61
Query: 267 EYLAAE 284
EYLAAE
Sbjct: 62 EYLAAE 67
>ref|XP_002512309.1| histone h2a, putative [Ricinus communis]
gi|223548270|gb|EEF49761.1| histone h2a, putative
[Ricinus communis]
Length = 140
Score = 90.1 bits (222), Expect = 3e-16
Identities = 46/66 (69%), Positives = 50/66 (75%)
Frame = +3
Query: 87 SKETGASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSAVL 266
S G++KGGRG AGLQFPVGRIARFLKAGKYAER+G+GAPVYLSAVL
Sbjct: 2 SSTGGSTKGGRGKPKASKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVL 61
Query: 267 EYLAAE 284
EYLAAE
Sbjct: 62 EYLAAE 67
>gb|EXC34660.1| Histone H2AX [Morus notabilis]
Length = 269
Score = 89.7 bits (221), Expect = 4e-16
Identities = 45/62 (72%), Positives = 49/62 (79%)
Frame = +3
Query: 99 GASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSAVLEYLA 278
G++KGGRG AGLQFPVGRIARFLKAGKYAER+G+GAPVYLSAVLEYLA
Sbjct: 5 GSTKGGRGKPKASKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLA 64
Query: 279 AE 284
AE
Sbjct: 65 AE 66
>ref|XP_002892475.1| hypothetical protein ARALYDRAFT_888122 [Arabidopsis lyrata subsp.
lyrata] gi|297338317|gb|EFH68734.1| hypothetical protein
ARALYDRAFT_888122 [Arabidopsis lyrata subsp. lyrata]
Length = 142
Score = 89.7 bits (221), Expect = 4e-16
Identities = 45/63 (71%), Positives = 49/63 (77%)
Frame = +3
Query: 96 TGASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSAVLEYL 275
+G +KGGRG AGLQFPVGRIARFLKAGKYAER+G+GAPVYLSAVLEYL
Sbjct: 7 SGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYL 66
Query: 276 AAE 284
AAE
Sbjct: 67 AAE 69
>ref|XP_002520711.1| histone h2a, putative [Ricinus communis]
gi|223540096|gb|EEF41673.1| histone h2a, putative
[Ricinus communis]
Length = 139
Score = 89.7 bits (221), Expect = 4e-16
Identities = 45/62 (72%), Positives = 49/62 (79%)
Frame = +3
Query: 99 GASKGGRGXXXXXXXXXXXXXAGLQFPVGRIARFLKAGKYAERIGSGAPVYLSAVLEYLA 278
GA+KGGRG AGLQFPVGRIARFLKAGKYA+R+G+GAPVYLSAVLEYLA
Sbjct: 5 GATKGGRGKPKSSKSVSRSQKAGLQFPVGRIARFLKAGKYADRVGAGAPVYLSAVLEYLA 64
Query: 279 AE 284
AE
Sbjct: 65 AE 66