BLASTX nr result

ID: Catharanthus22_contig00011614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00011614
         (616 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003636525.1| Cc-nbs-lrr resistance protein [Medicago trun...    57   4e-06

>ref|XP_003636525.1| Cc-nbs-lrr resistance protein [Medicago truncatula]
            gi|355502460|gb|AES83663.1| Cc-nbs-lrr resistance protein
            [Medicago truncatula]
          Length = 2248

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 36/192 (18%)
 Frame = +1

Query: 145  NCSDTLINLLPYLQVKFPSLEILEISSGKEVEMLRDEEHQYAAPDKLRELCIQNCDVL-- 318
            N ++T+ N+    +V F S + L++S   E++ L   +H++     L+ L +  CD L  
Sbjct: 1515 NLNNTIYNMFED-KVGFVSFKHLQLSEYPELKELWYGQHEHNTFRSLKYLVVHKCDFLSD 1573

Query: 319  -LYAICINDCWRNLEKLEIYNCESLIKVFQLQGTRVED--ERESTN------ADLQSSKH 471
             L+   + +   NLE+L++ +C SL  VF L+    ++   R ST       ++L   KH
Sbjct: 1574 VLFQPNLLEVLMNLEELDVEDCNSLEAVFDLKDEFAKEIVVRNSTQLKKLKISNLPKLKH 1633

Query: 472  QLLKD-------------------------SLCNLREVIVSNCKKLLHIFPSIDQPGVSV 576
               +D                         S+CNL  +IV NC  L ++FPS     V  
Sbjct: 1634 VWKEDAFPSLDTLKLSSLLNLNKVWDDNHQSMCNLTSLIVDNCVGLKYLFPS---TLVKS 1690

Query: 577  FRNLTSLQMFNC 612
            F NL  L++ NC
Sbjct: 1691 FMNLKHLEISNC 1702


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