BLASTX nr result

ID: Catharanthus22_contig00011293 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00011293
         (601 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006287103.1| hypothetical protein CARUB_v10000267mg [Caps...    59   1e-06
ref|XP_004308807.1| PREDICTED: uncharacterized protein LOC101303...    59   1e-06

>ref|XP_006287103.1| hypothetical protein CARUB_v10000267mg [Capsella rubella]
           gi|482555809|gb|EOA20001.1| hypothetical protein
           CARUB_v10000267mg [Capsella rubella]
          Length = 754

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
 Frame = +2

Query: 341 LTEVTEKEPDGFYSWRSENEKLNDQLTDVQHFDKLDLVLDEGTALEMLDELRRGRPKTS- 517
           LT V  K+  GF   R+ ++   ++ ++   F+ LD V+  G+      +L + + K   
Sbjct: 95  LTGVERKDDGGFGEKRNLDDGSGEKESE---FENLDGVVSAGS------DLLKSKDKNGF 145

Query: 518 SNSSLENGDLVWGRVKSYPWWPGQIFD 598
           +N  L N DLVW +V+SYPWWPGQ+FD
Sbjct: 146 ANLKLSNSDLVWAKVRSYPWWPGQVFD 172


>ref|XP_004308807.1| PREDICTED: uncharacterized protein LOC101303077 [Fragaria vesca
           subsp. vesca]
          Length = 1135

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 44/124 (35%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
 Frame = +2

Query: 251 SQSFLSENVAANMEISSMGNAFAEKSRLRTLTEVTEKEPDGFYSWRSENEKLNDQLTDVQ 430
           S+  L+ NV  ++   S  NA  E        EVTE + DG Y    + E   D      
Sbjct: 382 SEESLNNNVTTDLG-QSKTNAVHE-------VEVTEADMDGLYGETQDMEVERD----AS 429

Query: 431 HFDKLD-----LVLDEGT---ALEMLDELRRGRPKTSSNSSLENGDLVWGRVKSYPWWPG 586
           H ++L       V+ E T     E++ ELR   P+     +    DLVWG+VKS+PWWPG
Sbjct: 430 HMEQLKPSEEKTVIREATQPETSEIVPELRYELPQ-KHEGTFSVSDLVWGKVKSHPWWPG 488

Query: 587 QIFD 598
           QIFD
Sbjct: 489 QIFD 492


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