BLASTX nr result
ID: Catharanthus22_contig00011293
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus22_contig00011293 (601 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006287103.1| hypothetical protein CARUB_v10000267mg [Caps... 59 1e-06 ref|XP_004308807.1| PREDICTED: uncharacterized protein LOC101303... 59 1e-06 >ref|XP_006287103.1| hypothetical protein CARUB_v10000267mg [Capsella rubella] gi|482555809|gb|EOA20001.1| hypothetical protein CARUB_v10000267mg [Capsella rubella] Length = 754 Score = 58.9 bits (141), Expect = 1e-06 Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 1/87 (1%) Frame = +2 Query: 341 LTEVTEKEPDGFYSWRSENEKLNDQLTDVQHFDKLDLVLDEGTALEMLDELRRGRPKTS- 517 LT V K+ GF R+ ++ ++ ++ F+ LD V+ G+ +L + + K Sbjct: 95 LTGVERKDDGGFGEKRNLDDGSGEKESE---FENLDGVVSAGS------DLLKSKDKNGF 145 Query: 518 SNSSLENGDLVWGRVKSYPWWPGQIFD 598 +N L N DLVW +V+SYPWWPGQ+FD Sbjct: 146 ANLKLSNSDLVWAKVRSYPWWPGQVFD 172 >ref|XP_004308807.1| PREDICTED: uncharacterized protein LOC101303077 [Fragaria vesca subsp. vesca] Length = 1135 Score = 58.5 bits (140), Expect = 1e-06 Identities = 44/124 (35%), Positives = 59/124 (47%), Gaps = 8/124 (6%) Frame = +2 Query: 251 SQSFLSENVAANMEISSMGNAFAEKSRLRTLTEVTEKEPDGFYSWRSENEKLNDQLTDVQ 430 S+ L+ NV ++ S NA E EVTE + DG Y + E D Sbjct: 382 SEESLNNNVTTDLG-QSKTNAVHE-------VEVTEADMDGLYGETQDMEVERD----AS 429 Query: 431 HFDKLD-----LVLDEGT---ALEMLDELRRGRPKTSSNSSLENGDLVWGRVKSYPWWPG 586 H ++L V+ E T E++ ELR P+ + DLVWG+VKS+PWWPG Sbjct: 430 HMEQLKPSEEKTVIREATQPETSEIVPELRYELPQ-KHEGTFSVSDLVWGKVKSHPWWPG 488 Query: 587 QIFD 598 QIFD Sbjct: 489 QIFD 492