BLASTX nr result
ID: Catharanthus22_contig00011231
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00011231
(768 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_173426.1| hypothetical protein NitaMp085 [Nicotiana tabac... 148 2e-33
ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncat... 119 9e-25
sp|P15688.2|NU2M_BETVU RecName: Full=NADH-ubiquinone oxidoreduct... 96 2e-17
emb|CAA34729.1| unnamed protein product [Beta vulgaris subsp. vu... 96 2e-17
gb|EOY31163.1| Uncharacterized protein TCM_038148 [Theobroma cacao] 92 3e-16
ref|XP_004153848.1| PREDICTED: LOW QUALITY PROTEIN: NADH-ubiquin... 79 2e-12
emb|CBI23503.3| unnamed protein product [Vitis vinifera] 72 2e-10
ref|YP_588306.1| hypothetical protein ZeamMp044 [Zea mays subsp.... 63 7e-10
ref|XP_002534065.1| conserved hypothetical protein [Ricinus comm... 70 8e-10
ref|XP_006401945.1| hypothetical protein EUTSA_v10015951mg, part... 60 6e-09
gb|AEZ03709.1| hypothetical protein (mitochondrion) [Oryza sativ... 60 6e-07
ref|YP_173425.1| hypothetical protein NitaMp084 [Nicotiana tabac... 57 7e-06
>ref|YP_173426.1| hypothetical protein NitaMp085 [Nicotiana tabacum]
gi|56806590|dbj|BAD83491.1| hypothetical protein
(mitochondrion) [Nicotiana tabacum]
Length = 162
Score = 148 bits (374), Expect = 2e-33
Identities = 74/84 (88%), Positives = 76/84 (90%)
Frame = -2
Query: 446 LPALSNKTGSARESAGNNRKEGVHVAAAPAPFLVNGAQQVRHLLQKRESTSDNHASARQR 267
LP + +GSARESAGNNRKEGVHVAA APFLVNGAQQVRHLLQKRESTSDNH SARQR
Sbjct: 79 LPFIIKNSGSARESAGNNRKEGVHVAAVSAPFLVNGAQQVRHLLQKRESTSDNHVSARQR 138
Query: 266 VEWPRADLFGYIIQVESRVTGTAV 195
VEWPRADLFGYIIQVESRVTG AV
Sbjct: 139 VEWPRADLFGYIIQVESRVTGKAV 162
Score = 83.2 bits (204), Expect = 9e-14
Identities = 58/104 (55%), Positives = 63/104 (60%), Gaps = 5/104 (4%)
Frame = -3
Query: 679 MLPPTIKGKARRREGDAAGEGKGFRRSGLDFFFIEKAEDGLRCVLSEG-----NTLF*PP 515
ML PTIKGKARRREG AAGEGK FRRS FFF K R ++ G T F
Sbjct: 1 MLSPTIKGKARRREGGAAGEGKRFRRS--RFFFHRKRR---RPRMAYGASYLKGTRFFDR 55
Query: 514 WYEIAGPSPPSARWPIGIAAFGLCLPFLIKPARPGKALATTERK 383
IAGPSP SA PIGIAAFGLCLPF+IK + + A RK
Sbjct: 56 RGMIAGPSPRSA-LPIGIAAFGLCLPFIIKNSGSARESAGNNRK 98
>ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncatula]
gi|355477400|gb|AES58603.1| NADH dehydrogenase subunit
[Medicago truncatula]
Length = 1094
Score = 119 bits (299), Expect = 9e-25
Identities = 76/153 (49%), Positives = 86/153 (56%), Gaps = 7/153 (4%)
Frame = -1
Query: 738 THPLFMTKAGKNARQVQIRECFPQPLKERLDEGREMRRGKEKAFGDRDWISFSSRRPRMA 559
T P + KAGKNARQVQIRECFPQPLKERLDEGREMRRGKE AFGDR + + S + + A
Sbjct: 330 TPPPHLNKAGKNARQVQIRECFPQPLKERLDEGREMRRGKENAFGDRYFFIYLSSKTKKA 389
Query: 558 ---YGASYLKGTRFFDRRGMRXXXXXXXXXXXXXX*QPSGF----ACPF**NRLGPGKRW 400
+G F R +P G ACP LGPGKRW
Sbjct: 390 EDGLRCVLSEGNTLFRPR------WYDLGPSPRSARRPLGIAAFVACPL---YLGPGKRW 440
Query: 399 QQQKGRGPCSCCARPLLSQWGTAGSASTTKERI 301
QQQKGRGPCS A L+ G AGS++ RI
Sbjct: 441 QQQKGRGPCSASAPFLVD--GAAGSSTFFSSRI 471
Score = 119 bits (298), Expect = 1e-24
Identities = 98/245 (40%), Positives = 112/245 (45%), Gaps = 6/245 (2%)
Frame = -3
Query: 736 PPPIYD*GWKECPPSSDKGMLPPTIKGKARRREGDAAGEGKGFRRSGLDFFFI------E 575
PPP + K + P +K R EG GK G +FFI +
Sbjct: 331 PPPHLNKAGKNARQVQIRECFPQPLK--ERLDEGREMRRGKE-NAFGDRYFFIYLSSKTK 387
Query: 574 KAEDGLRCVLSEGNTLF*PPWYEIAGPSPPSARWPIGIAAFGLCLPFLIKPARPGKALAT 395
KAEDGLRCVLSEGNTLF P WY++ GPSP SAR P+GIAAF C +L PGK
Sbjct: 388 KAEDGLRCVLSEGNTLFRPRWYDL-GPSPRSARRPLGIAAFVACPLYL----GPGKRWQQ 442
Query: 394 TERKGXXXXXXXXXXXXMGHSRFGIYYKRENPLQITTPLLGSVWNGRERTFLDI*SKLRV 215
+ +G P + P L
Sbjct: 443 QKGRG--------------------------PCSASAPFL-------------------- 456
Query: 214 ELREQPSDGKRLSRSVQRALFSLRIPRSLSCEFPSGEFKTCGALSIPSLEPRRKPPSPSD 35
DG S + FS RI RSLSCEFPSGEF T ALSIPSL+PR KPPSPSD
Sbjct: 457 ------VDGAAGSST----FFSSRILRSLSCEFPSGEFNTFWALSIPSLKPRIKPPSPSD 506
Query: 34 SISLL 20
SISLL
Sbjct: 507 SISLL 511
>sp|P15688.2|NU2M_BETVU RecName: Full=NADH-ubiquinone oxidoreductase chain 2; AltName:
Full=NADH dehydrogenase subunit 2
gi|12822|emb|CAA34728.1| NADH:ubiquinone reductase
subunit 2 [Beta vulgaris subsp. vulgaris]
Length = 515
Score = 95.5 bits (236), Expect = 2e-17
Identities = 67/145 (46%), Positives = 77/145 (53%), Gaps = 6/145 (4%)
Frame = -2
Query: 437 LSNKTGSARESAGNNRKEGVHVAAAPAPFLVNGAQQVRHLLQKRESTSDNHASARQRVEW 258
L +GSARESAGNNRKEGVHVAAA APFLVN A ++R +ASA
Sbjct: 77 LIKNSGSARESAGNNRKEGVHVAAASAPFLVNRAAGSATTTKERIHFKITNASAMAACGM 136
Query: 257 PRADLFGYIIQVESRVTGTAV*WKXXXXXXXXXXXFVENSSFPFV*IPQ------RRIQN 96
+DLFGYIIQVES VTGTA V+ + F + RIQN
Sbjct: 137 AGSDLFGYIIQVESGVTGTA------GLMENNFHGSVQRALFSLRILRSLRVNSLARIQN 190
Query: 95 LWGPIYSISRAPKKTSLPFRLHISF 21
WGP S +P KT LPF L+I F
Sbjct: 191 FWGPSIP-SSSPAKTPLPFGLNIFF 214
Score = 73.2 bits (178), Expect = 9e-11
Identities = 75/230 (32%), Positives = 93/230 (40%), Gaps = 20/230 (8%)
Frame = -3
Query: 679 MLPPTIKGKARRREGDAAGEGKGFRRSGLDFFFIEKAEDGLRCVLSEGNTLF*PPWYEIA 500
ML TIKGKARRR+ A G+ R L F K + + +G F I
Sbjct: 1 MLSLTIKGKARRRKERAFGD-----RDFLTFSSKTKKTENVNLSFEKGTRFF-DRGGMIF 54
Query: 499 GPSPPSARWPIGIAAFGLCLPFLIKPARPGKALATTERKGXXXXXXXXXXXXMGHSRFGI 320
GPSP SARWPIGIAAFGLCL FLIK + + A RK G+
Sbjct: 55 GPSPRSARWPIGIAAFGLCLLFLIKNSGSARESAGNNRKE------------------GV 96
Query: 319 YYKRENPLQITTPLLGSVWNGRERTFLDI*SK-----------------LRVELREQPSD 191
+ + + GS +ER I + ++VE +
Sbjct: 97 HVAAASAPFLVNRAAGSATTTKERIHFKITNASAMAACGMAGSDLFGYIIQVESGVTGTA 156
Query: 190 G---KRLSRSVQRALFSLRIPRSLSCEFPSGEFKTCGALSIPSLEPRRKP 50
G SVQRALFSLRI RSL + SIPS P + P
Sbjct: 157 GLMENNFHGSVQRALFSLRILRSLRVN-SLARIQNFWGPSIPSSSPAKTP 205
>emb|CAA34729.1| unnamed protein product [Beta vulgaris subsp. vulgaris]
Length = 464
Score = 95.5 bits (236), Expect = 2e-17
Identities = 67/145 (46%), Positives = 77/145 (53%), Gaps = 6/145 (4%)
Frame = -2
Query: 437 LSNKTGSARESAGNNRKEGVHVAAAPAPFLVNGAQQVRHLLQKRESTSDNHASARQRVEW 258
L +GSARESAGNNRKEGVHVAAA APFLVN A ++R +ASA
Sbjct: 26 LIKNSGSARESAGNNRKEGVHVAAASAPFLVNRAAGSATTTKERIHFKITNASAMAACGM 85
Query: 257 PRADLFGYIIQVESRVTGTAV*WKXXXXXXXXXXXFVENSSFPFV*IPQ------RRIQN 96
+DLFGYIIQVES VTGTA V+ + F + RIQN
Sbjct: 86 AGSDLFGYIIQVESGVTGTA------GLMENNFHGSVQRALFSLRILRSLRVNSLARIQN 139
Query: 95 LWGPIYSISRAPKKTSLPFRLHISF 21
WGP S +P KT LPF L+I F
Sbjct: 140 FWGPSIP-SSSPAKTPLPFGLNIFF 163
>gb|EOY31163.1| Uncharacterized protein TCM_038148 [Theobroma cacao]
Length = 538
Score = 91.7 bits (226), Expect = 3e-16
Identities = 44/47 (93%), Positives = 46/47 (97%)
Frame = -2
Query: 335 QQVRHLLQKRESTSDNHASARQRVEWPRADLFGYIIQVESRVTGTAV 195
+QVRHLL+KRESTSDNHASARQRVEWPRADLFGYIIQVES VTGTAV
Sbjct: 492 EQVRHLLEKRESTSDNHASARQRVEWPRADLFGYIIQVESGVTGTAV 538
>ref|XP_004153848.1| PREDICTED: LOW QUALITY PROTEIN: NADH-ubiquinone oxidoreductase
chain 2-like, partial [Cucumis sativus]
Length = 472
Score = 78.6 bits (192), Expect = 2e-12
Identities = 39/53 (73%), Positives = 43/53 (81%), Gaps = 3/53 (5%)
Frame = -3
Query: 163 RALFSLRIPRSLSCEFPSGEFKTCGALSIPSLEPRRKPPSPSDSISL---LWA 14
RALFSL IPRSLSC FPSGEF+TCGALSIPSL+PR KPP PS + L +WA
Sbjct: 44 RALFSLIIPRSLSCSFPSGEFETCGALSIPSLKPRXKPPLPSGPLFLTLYMWA 96
>emb|CBI23503.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 72.0 bits (175), Expect = 2e-10
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = -1
Query: 423 RLGPGKRWQQQKGRGPCSCCARPLLSQWGT 334
RLGPGKRWQQQKGRGPCSCCARPLLSQWG+
Sbjct: 194 RLGPGKRWQQQKGRGPCSCCARPLLSQWGS 223
>ref|YP_588306.1| hypothetical protein ZeamMp044 [Zea mays subsp. mays]
gi|40795129|gb|AAR91173.1| hypothetical protein
(mitochondrion) [Zea mays] gi|102579662|gb|ABF70942.1|
hypothetical protein (mitochondrion) [Zea mays subsp.
mays]
Length = 101
Score = 63.2 bits (152), Expect(2) = 7e-10
Identities = 31/45 (68%), Positives = 33/45 (73%), Gaps = 5/45 (11%)
Frame = -1
Query: 456 PSGFAC-----PF**NRLGPGKRWQQQKGRGPCSCCARPLLSQWG 337
PSGFAC F RLGPGKRWQQ K RGPCSCCARPL S++G
Sbjct: 49 PSGFACRRSNKEF---RLGPGKRWQQHKERGPCSCCARPLSSRFG 90
Score = 27.3 bits (59), Expect(2) = 7e-10
Identities = 17/34 (50%), Positives = 18/34 (52%)
Frame = -3
Query: 667 TIKGKARRREGDAAGEGKGFRRSGLDFFFIEKAE 566
T KGKARRR G S +D FFIEK E
Sbjct: 13 TTKGKARRRGGRVRK-----TLSEIDLFFIEKEE 41
>ref|XP_002534065.1| conserved hypothetical protein [Ricinus communis]
gi|223525904|gb|EEF28320.1| conserved hypothetical
protein [Ricinus communis]
Length = 83
Score = 70.1 bits (170), Expect = 8e-10
Identities = 40/80 (50%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Frame = -1
Query: 564 MAYGASYLKGTRFFDRRGMRXXXXXXXXXXXXXX*QPSGFACPF**N---RLGPGKRWQQ 394
M YGA YLKGTRFF+R GM S A P N RL P +RWQQ
Sbjct: 1 MVYGACYLKGTRFFNRGGM--IAGPSPRSARWPIGDSSLQALPALSNKNFRLDPRERWQQ 58
Query: 393 QKGRGPCSCCARPLLSQWGT 334
KG+GPCSC RPLLS+WG+
Sbjct: 59 HKGKGPCSCYVRPLLSKWGS 78
>ref|XP_006401945.1| hypothetical protein EUTSA_v10015951mg, partial [Eutrema
salsugineum] gi|557103035|gb|ESQ43398.1| hypothetical
protein EUTSA_v10015951mg, partial [Eutrema salsugineum]
Length = 414
Score = 60.1 bits (144), Expect(2) = 6e-09
Identities = 32/47 (68%), Positives = 33/47 (70%)
Frame = -3
Query: 739 NPPPIYD*GWKECPPSSDKGMLPPTIKGKARRREGDAAGEGKGFRRS 599
NP P GWKECPPSSDK P KARRREGDAAG+GKGF RS
Sbjct: 80 NPSP----GWKECPPSSDKVSTSPR---KARRREGDAAGKGKGFWRS 119
Score = 26.9 bits (58), Expect(2) = 6e-09
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -2
Query: 767 LQIMFEPMFKPTP 729
LQIMFEPMFK P
Sbjct: 69 LQIMFEPMFKQNP 81
Score = 60.1 bits (144), Expect = 8e-07
Identities = 44/109 (40%), Positives = 49/109 (44%), Gaps = 6/109 (5%)
Frame = -1
Query: 684 RECFPQPLKERLDEGREMRR-----GKEKAFG-DRDWISFSSRRPRMAYGASYLKGTRFF 523
+EC P K + RR GK K F RD++S+ PRMAYGA YLKG RFF
Sbjct: 86 KECPPSSDKVSTSPRKARRREGDAAGKGKGFWRSRDFLSW----PRMAYGACYLKGARFF 141
Query: 522 DRRGMRXXXXXXXXXXXXXX*QPSGFACPF**NRLGPGKRWQQQKGRGP 376
DR M LGPGKRWQQQK RGP
Sbjct: 142 DRGAMIAGASPQYNKKFW----------------LGPGKRWQQQKRRGP 174
>gb|AEZ03709.1| hypothetical protein (mitochondrion) [Oryza sativa Indica Group]
gi|374277705|gb|AEZ03810.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
Length = 164
Score = 60.5 bits (145), Expect = 6e-07
Identities = 29/43 (67%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Frame = +2
Query: 335 VPH*LRRGRAQQLHGPLPFCCCQRFPGPSR--FY*KGQAKPEG 457
+P+ L GRAQQLHGPL CCCQRFPGPSR + QAKPEG
Sbjct: 1 MPNLLLSGRAQQLHGPLSLCCCQRFPGPSRNSLLERRQAKPEG 43
>ref|YP_173425.1| hypothetical protein NitaMp084 [Nicotiana tabacum]
gi|56806589|dbj|BAD83490.1| hypothetical protein
(mitochondrion) [Nicotiana tabacum]
Length = 105
Score = 57.0 bits (136), Expect = 7e-06
Identities = 42/98 (42%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Frame = +3
Query: 375 MDPFLSVVASAFPGRAG-FIRKGRQSPKAAIPIGQRAEGGEGPAISYHGGQKSVFPSDKT 551
MDPFLSVVASAFPGRAG F KG+ P+ + P ++ GP +K+ +
Sbjct: 1 MDPFLSVVASAFPGRAGIFYYKGQAKPEGSYP-NRKGGTRRGPGNHTTAVKKACSLQIRR 59
Query: 552 ---HRRPSSAFSMKKKSNPDLRKPFPSPAASPSLRRAF 656
H RPSS FSMKKKS FP + PS +F
Sbjct: 60 TVGHPRPSS-FSMKKKSRSPKAFSFPRRTSLPSSSLSF 96