BLASTX nr result
ID: Catharanthus22_contig00011113
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00011113
(422 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004247344.1| PREDICTED: KH domain-containing protein At4g... 133 3e-29
gb|EXB93216.1| Poly(rC)-binding protein 1 [Morus notabilis] 128 7e-28
ref|XP_006351686.1| PREDICTED: poly(rC)-binding protein 2-like [... 127 2e-27
ref|XP_006487775.1| PREDICTED: poly(rC)-binding protein 3-like i... 122 5e-26
ref|XP_006487774.1| PREDICTED: poly(rC)-binding protein 3-like i... 122 5e-26
ref|XP_006423978.1| hypothetical protein CICLE_v10028209mg [Citr... 122 6e-26
ref|XP_006352750.1| PREDICTED: KH domain-containing protein At4g... 121 8e-26
ref|XP_006574469.1| PREDICTED: uncharacterized protein LOC100819... 119 3e-25
ref|XP_006574468.1| PREDICTED: uncharacterized protein LOC100819... 119 3e-25
ref|XP_004242353.1| PREDICTED: KH domain-containing protein At4g... 119 5e-25
gb|EOY11034.1| RNA-binding KH domain-containing protein [Theobro... 118 7e-25
ref|XP_003554712.1| PREDICTED: poly(rC)-binding protein 3-like [... 117 1e-24
gb|AAX51268.1| FLK [Arabidopsis thaliana] gi|61661326|gb|AAX5126... 117 1e-24
ref|NP_187112.1| RNA-binding KH domain-containing protein [Arabi... 117 1e-24
ref|XP_006297308.1| hypothetical protein CARUB_v10013322mg [Caps... 117 2e-24
gb|EMT30282.1| hypothetical protein F775_32710 [Aegilops tauschii] 117 2e-24
ref|XP_006588662.1| PREDICTED: poly(rC)-binding protein 1-like [... 116 3e-24
gb|EPS58696.1| hypothetical protein M569_16117, partial [Genlise... 116 3e-24
ref|XP_004172929.1| PREDICTED: poly(rC)-binding protein 3-like [... 116 3e-24
ref|XP_004139248.1| PREDICTED: poly(rC)-binding protein 3-like [... 116 3e-24
>ref|XP_004247344.1| PREDICTED: KH domain-containing protein At4g18375-like [Solanum
lycopersicum]
Length = 595
Score = 133 bits (334), Expect = 3e-29
Identities = 76/159 (47%), Positives = 91/159 (57%), Gaps = 49/159 (30%)
Frame = -1
Query: 332 FDRIN*QMAEENLEQHEV------------------DNVTEEDNVPE------------- 246
FD+ N +MA+EN EQ E+ DNV +DNV +
Sbjct: 87 FDQRNVEMADENFEQPEMGNLHDTENLDNMNNVQDNDNVNGKDNVHDANHVHDADHVHDA 146
Query: 245 -------DLEQSELPPS-----EEVHEPENEPVIP------EDKKWPGWPGENVFRMLVP 120
++ SE P+ EE H E + V P E+KKWPGWPG+NVFRMLVP
Sbjct: 147 DDVHNMNNIHDSEAIPALINAPEETHHSEEDKVTPTDAVAGEEKKWPGWPGQNVFRMLVP 206
Query: 119 VQKVGGIIGRKGEYIKKVCEEAKARIKILDGPPGTTERA 3
+QKVGG+IGRKGEYIKK CEE KARIK+LDGPPGTTERA
Sbjct: 207 IQKVGGVIGRKGEYIKKTCEETKARIKVLDGPPGTTERA 245
>gb|EXB93216.1| Poly(rC)-binding protein 1 [Morus notabilis]
Length = 462
Score = 128 bits (322), Expect = 7e-28
Identities = 67/114 (58%), Positives = 80/114 (70%), Gaps = 10/114 (8%)
Frame = -1
Query: 314 QMAEENL-EQHEVDNVTEEDNVPEDLE--QSELPPSEEVHEPENEPVI-------PEDKK 165
++ E+N EQ VDNV E VPE++E + E P E+ E EPV+ +KK
Sbjct: 3 EVEEQNFGEQDVVDNVPENSEVPENVEVPEPEEPQPEQKQEQYEEPVVGGGEPVGAAEKK 62
Query: 164 WPGWPGENVFRMLVPVQKVGGIIGRKGEYIKKVCEEAKARIKILDGPPGTTERA 3
WPGWPGE+VFRMLVP QKVG IIGRKGE+IKK+ EE +ARIKILDGPPGT ERA
Sbjct: 63 WPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERA 116
>ref|XP_006351686.1| PREDICTED: poly(rC)-binding protein 2-like [Solanum tuberosum]
Length = 531
Score = 127 bits (318), Expect = 2e-27
Identities = 58/96 (60%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Frame = -1
Query: 287 HEVDNVTEEDNVPE-DLEQSELPPSEEVHEPENEPVIPEDKKWPGWPGENVFRMLVPVQK 111
H ++N+ + + +P + E SEEV + E+KKWPGWPG+NVFRML+P+QK
Sbjct: 57 HNMNNIHDSETIPAVNNAPEETHHSEEVKVTPTDAGTGEEKKWPGWPGQNVFRMLIPIQK 116
Query: 110 VGGIIGRKGEYIKKVCEEAKARIKILDGPPGTTERA 3
VGG+IGRKGEYIKK CEE KARIK+LDGPPGTTERA
Sbjct: 117 VGGVIGRKGEYIKKTCEETKARIKVLDGPPGTTERA 152
>ref|XP_006487775.1| PREDICTED: poly(rC)-binding protein 3-like isoform X2 [Citrus
sinensis]
Length = 520
Score = 122 bits (306), Expect = 5e-26
Identities = 64/110 (58%), Positives = 79/110 (71%), Gaps = 6/110 (5%)
Frame = -1
Query: 314 QMAEENL-EQHEVDNVTEEDNVPEDLEQSELPP--SEEVHEPENE---PVIPEDKKWPGW 153
Q+ E+ + E H ++ ED+VPED ++ P S+ + ENE V +KKWPGW
Sbjct: 67 QLTEDQVPEDHVPEDQVPEDHVPEDQVPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGW 126
Query: 152 PGENVFRMLVPVQKVGGIIGRKGEYIKKVCEEAKARIKILDGPPGTTERA 3
PGE+VFRMLVP QKVG IIGRKGE+IKK+ EE +ARIKILDGPPGTTERA
Sbjct: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERA 176
>ref|XP_006487774.1| PREDICTED: poly(rC)-binding protein 3-like isoform X1 [Citrus
sinensis]
Length = 521
Score = 122 bits (306), Expect = 5e-26
Identities = 64/110 (58%), Positives = 79/110 (71%), Gaps = 6/110 (5%)
Frame = -1
Query: 314 QMAEENL-EQHEVDNVTEEDNVPEDLEQSELPP--SEEVHEPENE---PVIPEDKKWPGW 153
Q+ E+ + E H ++ ED+VPED ++ P S+ + ENE V +KKWPGW
Sbjct: 67 QLTEDQVPEDHVPEDQVPEDHVPEDQVPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGW 126
Query: 152 PGENVFRMLVPVQKVGGIIGRKGEYIKKVCEEAKARIKILDGPPGTTERA 3
PGE+VFRMLVP QKVG IIGRKGE+IKK+ EE +ARIKILDGPPGTTERA
Sbjct: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERA 176
>ref|XP_006423978.1| hypothetical protein CICLE_v10028209mg [Citrus clementina]
gi|557525912|gb|ESR37218.1| hypothetical protein
CICLE_v10028209mg [Citrus clementina]
Length = 521
Score = 122 bits (305), Expect = 6e-26
Identities = 60/105 (57%), Positives = 75/105 (71%), Gaps = 1/105 (0%)
Frame = -1
Query: 314 QMAEENL-EQHEVDNVTEEDNVPEDLEQSELPPSEEVHEPENEPVIPEDKKWPGWPGENV 138
Q+ E+++ E H ++ +D VPED+ + E+ N V +KKWPGWPGE+V
Sbjct: 72 QVPEDHVPEDHVPEDHVPDDQVPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESV 131
Query: 137 FRMLVPVQKVGGIIGRKGEYIKKVCEEAKARIKILDGPPGTTERA 3
FRMLVP QKVG IIGRKGE+IKK+ EE +ARIKILDGPPGTTERA
Sbjct: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERA 176
>ref|XP_006352750.1| PREDICTED: KH domain-containing protein At4g18375-like [Solanum
tuberosum]
Length = 512
Score = 121 bits (304), Expect = 8e-26
Identities = 71/119 (59%), Positives = 73/119 (61%), Gaps = 17/119 (14%)
Frame = -1
Query: 308 AEENLEQHEVDNVTEEDNV------PEDLEQSELPPS-----------EEVHEPENEPVI 180
A ENL EV TEE V P LEQ E EEV EN
Sbjct: 50 AHENLLPEEVKLETEEVQVAFLQEQPVKLEQEEAQVESLQEHVIKSEPEEVQIAENGSGG 109
Query: 179 PEDKKWPGWPGENVFRMLVPVQKVGGIIGRKGEYIKKVCEEAKARIKILDGPPGTTERA 3
E+KKWPGWPGENVFRMLVP QKVGGIIGRKGEYIKK CEE KARIK+LDGP GT ERA
Sbjct: 110 GEEKKWPGWPGENVFRMLVPSQKVGGIIGRKGEYIKKTCEETKARIKVLDGPHGTKERA 168
>ref|XP_006574469.1| PREDICTED: uncharacterized protein LOC100819415 isoform X2 [Glycine
max]
Length = 483
Score = 119 bits (299), Expect = 3e-25
Identities = 66/124 (53%), Positives = 75/124 (60%), Gaps = 27/124 (21%)
Frame = -1
Query: 293 EQHEVDNVTEEDNVPED---------LEQSELPP------------------SEEVHEPE 195
++HE N+ E+ N PE L + PP SEE EPE
Sbjct: 60 DEHEGGNLAEDANHPEHNFDGNDVEGLPGPDFPPQEHAEEQHVGGDVTENFASEEKQEPE 119
Query: 194 NEPVIPEDKKWPGWPGENVFRMLVPVQKVGGIIGRKGEYIKKVCEEAKARIKILDGPPGT 15
+ E KKWPGWPGENVFRMLVPVQKVG IIGRKGE+I+K+ EE KARIKILDGPPGT
Sbjct: 120 EDLKGGEVKKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIRKITEETKARIKILDGPPGT 179
Query: 14 TERA 3
ERA
Sbjct: 180 AERA 183
>ref|XP_006574468.1| PREDICTED: uncharacterized protein LOC100819415 isoform X1 [Glycine
max]
Length = 502
Score = 119 bits (299), Expect = 3e-25
Identities = 66/124 (53%), Positives = 75/124 (60%), Gaps = 27/124 (21%)
Frame = -1
Query: 293 EQHEVDNVTEEDNVPED---------LEQSELPP------------------SEEVHEPE 195
++HE N+ E+ N PE L + PP SEE EPE
Sbjct: 60 DEHEGGNLAEDANHPEHNFDGNDVEGLPGPDFPPQEHAEEQHVGGDVTENFASEEKQEPE 119
Query: 194 NEPVIPEDKKWPGWPGENVFRMLVPVQKVGGIIGRKGEYIKKVCEEAKARIKILDGPPGT 15
+ E KKWPGWPGENVFRMLVPVQKVG IIGRKGE+I+K+ EE KARIKILDGPPGT
Sbjct: 120 EDLKGGEVKKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIRKITEETKARIKILDGPPGT 179
Query: 14 TERA 3
ERA
Sbjct: 180 AERA 183
>ref|XP_004242353.1| PREDICTED: KH domain-containing protein At4g18375-like [Solanum
lycopersicum]
Length = 539
Score = 119 bits (297), Expect = 5e-25
Identities = 61/98 (62%), Positives = 67/98 (68%)
Frame = -1
Query: 296 LEQHEVDNVTEEDNVPEDLEQSELPPSEEVHEPENEPVIPEDKKWPGWPGENVFRMLVPV 117
L++H V EE V E EE+ EN E+K+WPGWPGENVFRMLVP
Sbjct: 95 LQEHPVKLEQEEAQVESLQEHVIKSEPEEMQVAENGSGGGEEKRWPGWPGENVFRMLVPS 154
Query: 116 QKVGGIIGRKGEYIKKVCEEAKARIKILDGPPGTTERA 3
QKVGGIIGRKGEYIKK CEE KARIK+LDGP GT ERA
Sbjct: 155 QKVGGIIGRKGEYIKKTCEETKARIKVLDGPHGTKERA 192
>gb|EOY11034.1| RNA-binding KH domain-containing protein [Theobroma cacao]
Length = 499
Score = 118 bits (296), Expect = 7e-25
Identities = 59/91 (64%), Positives = 70/91 (76%), Gaps = 4/91 (4%)
Frame = -1
Query: 263 EDNVPEDLEQSELP---PSEEVHEPENEPVIPE-DKKWPGWPGENVFRMLVPVQKVGGII 96
E+N E+LE+ L P + E E+E V+ +KKWPGWPGE+VFRMLVP QKVG II
Sbjct: 59 EENAEENLEEQNLQQESPHQPKQEHEDEAVVGGVEKKWPGWPGESVFRMLVPAQKVGSII 118
Query: 95 GRKGEYIKKVCEEAKARIKILDGPPGTTERA 3
GRKGE+IKK+ EE +ARIKILDGPPGTTERA
Sbjct: 119 GRKGEFIKKIVEETRARIKILDGPPGTTERA 149
>ref|XP_003554712.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 446
Score = 117 bits (294), Expect = 1e-24
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = -1
Query: 284 EVDNVTEEDNVPEDLEQSELPPSEEVHEPENEPVIPEDKKWPGWPGENVFRMLVPVQKVG 105
EVD T ++ E E E+ EE+H E E V+ +KKWPGWPGE+VFRMLVP QKVG
Sbjct: 3 EVDQYTGGEHEVE--ETIEVEAEEEMHGGE-EAVVVAEKKWPGWPGESVFRMLVPAQKVG 59
Query: 104 GIIGRKGEYIKKVCEEAKARIKILDGPPGTTERA 3
GIIGRKGE+IKK+ EE +AR+KILDGPPGT +RA
Sbjct: 60 GIIGRKGEFIKKIVEETRARVKILDGPPGTVQRA 93
>gb|AAX51268.1| FLK [Arabidopsis thaliana] gi|61661326|gb|AAX51269.1| FLK
[Arabidopsis thaliana]
Length = 577
Score = 117 bits (294), Expect = 1e-24
Identities = 58/93 (62%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Frame = -1
Query: 278 DNVTEEDNVPEDLEQSELPPSEEVHEPENEPVIP-EDKKWPGWPGENVFRMLVPVQKVGG 102
D V +E+ +PE LE S + EPE + + E+K+WPGWPGE VFRMLVP QKVG
Sbjct: 147 DKVEDEEGIPEHLE------SLQKSEPEEDATVGGEEKRWPGWPGETVFRMLVPAQKVGS 200
Query: 101 IIGRKGEYIKKVCEEAKARIKILDGPPGTTERA 3
IIGRKG+ IKK+ EE +ARIKILDGPPGTTERA
Sbjct: 201 IIGRKGDVIKKIVEETRARIKILDGPPGTTERA 233
>ref|NP_187112.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|6175183|gb|AAF04909.1|AC011437_24 putative
RNA-binding protein [Arabidopsis thaliana]
gi|17979249|gb|AAL49941.1| AT3g04610/F7O18_9
[Arabidopsis thaliana] gi|332640585|gb|AEE74106.1|
RNA-binding KH domain-containing protein [Arabidopsis
thaliana]
Length = 577
Score = 117 bits (294), Expect = 1e-24
Identities = 58/93 (62%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Frame = -1
Query: 278 DNVTEEDNVPEDLEQSELPPSEEVHEPENEPVIP-EDKKWPGWPGENVFRMLVPVQKVGG 102
D V +E+ +PE LE S + EPE + + E+K+WPGWPGE VFRMLVP QKVG
Sbjct: 147 DKVEDEEGIPEHLE------SLQKSEPEEDATVGGEEKRWPGWPGETVFRMLVPAQKVGS 200
Query: 101 IIGRKGEYIKKVCEEAKARIKILDGPPGTTERA 3
IIGRKG+ IKK+ EE +ARIKILDGPPGTTERA
Sbjct: 201 IIGRKGDVIKKIVEETRARIKILDGPPGTTERA 233
>ref|XP_006297308.1| hypothetical protein CARUB_v10013322mg [Capsella rubella]
gi|482566017|gb|EOA30206.1| hypothetical protein
CARUB_v10013322mg [Capsella rubella]
Length = 577
Score = 117 bits (293), Expect = 2e-24
Identities = 59/93 (63%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Frame = -1
Query: 278 DNVTEEDNVPEDLEQSELPPSEEVHEPENEPVIP-EDKKWPGWPGENVFRMLVPVQKVGG 102
D V +E+ +PE LE S E EPE + E+K+WPGWPGE VFRMLVP QKVG
Sbjct: 147 DKVEDEEGIPEHLE------SLEKSEPEEGAAVGGEEKRWPGWPGETVFRMLVPAQKVGS 200
Query: 101 IIGRKGEYIKKVCEEAKARIKILDGPPGTTERA 3
IIGRKG+ IKK+ EE +ARIKILDGPPGTTERA
Sbjct: 201 IIGRKGDVIKKIVEETRARIKILDGPPGTTERA 233
>gb|EMT30282.1| hypothetical protein F775_32710 [Aegilops tauschii]
Length = 193
Score = 117 bits (293), Expect = 2e-24
Identities = 55/89 (61%), Positives = 70/89 (78%)
Frame = -1
Query: 269 TEEDNVPEDLEQSELPPSEEVHEPENEPVIPEDKKWPGWPGENVFRMLVPVQKVGGIIGR 90
T+ D+ P + Q E + EV + E+ V +DK+WPGWPG++VFR+LVP QKVG IIGR
Sbjct: 100 TQYDDEPANPYQEENAYNGEVKQQESLQVEGDDKRWPGWPGDSVFRILVPAQKVGAIIGR 159
Query: 89 KGEYIKKVCEEAKARIKILDGPPGTTERA 3
KGE+IK++CEE+KARIKILDGPPG TERA
Sbjct: 160 KGEFIKRMCEESKARIKILDGPPGATERA 188
>ref|XP_006588662.1| PREDICTED: poly(rC)-binding protein 1-like [Glycine max]
Length = 565
Score = 116 bits (291), Expect = 3e-24
Identities = 63/125 (50%), Positives = 76/125 (60%), Gaps = 28/125 (22%)
Frame = -1
Query: 293 EQHEVDNVTEEDNVPE------DLE----QSELPPSEEVHE------------------P 198
++H N+ E+ N+PE D+E +LP E E P
Sbjct: 84 DEHNAGNLAEDGNIPEHNFDGNDVEGLPGNPDLPSQEHAEEQNIGGDVTENFGSEEKRGP 143
Query: 197 ENEPVIPEDKKWPGWPGENVFRMLVPVQKVGGIIGRKGEYIKKVCEEAKARIKILDGPPG 18
E + E KKWPGWPGENVFRMLVPVQKVG IIGRKGE+I+K+ E+ KARIKILDGPPG
Sbjct: 144 EEDLKGGEVKKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIRKITEDTKARIKILDGPPG 203
Query: 17 TTERA 3
T+ERA
Sbjct: 204 TSERA 208
>gb|EPS58696.1| hypothetical protein M569_16117, partial [Genlisea aurea]
Length = 106
Score = 116 bits (291), Expect = 3e-24
Identities = 63/106 (59%), Positives = 74/106 (69%), Gaps = 6/106 (5%)
Frame = -1
Query: 302 ENLEQHEVDNVTEEDNVPEDLEQSELPPSEEVHEPENEPVIPED------KKWPGWPGEN 141
EN ++E+ N E N ED E+P + +H PE EP +D +KWPGWPGE+
Sbjct: 7 ENEFENELRNQLENTNEVED----EVPVNN-IH-PEEEPGYADDPDVGSGEKWPGWPGES 60
Query: 140 VFRMLVPVQKVGGIIGRKGEYIKKVCEEAKARIKILDGPPGTTERA 3
VFRMLVP QKVG IIGRKGEYIKK CEE K+RIKILDGPPGT +RA
Sbjct: 61 VFRMLVPAQKVGSIIGRKGEYIKKTCEETKSRIKILDGPPGTRDRA 106
>ref|XP_004172929.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 453
Score = 116 bits (291), Expect = 3e-24
Identities = 65/111 (58%), Positives = 78/111 (70%), Gaps = 5/111 (4%)
Frame = -1
Query: 320 N*QMAEENLEQH---EVDNVTEEDN--VPEDLEQSELPPSEEVHEPENEPVIPEDKKWPG 156
N Q+ + LEQ EV+N+ E N +PE LE ++VH + V+ E KKWPG
Sbjct: 26 NAQVHDITLEQENAQEVENLHELQNEHIPETLESEP----KQVHIEDPLTVVSE-KKWPG 80
Query: 155 WPGENVFRMLVPVQKVGGIIGRKGEYIKKVCEEAKARIKILDGPPGTTERA 3
WPGE+VFRMLVP QKVG IIGRKGE+IKK+ EE +ARIKILDGPPGT ERA
Sbjct: 81 WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERA 131
>ref|XP_004139248.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 483
Score = 116 bits (291), Expect = 3e-24
Identities = 65/111 (58%), Positives = 78/111 (70%), Gaps = 5/111 (4%)
Frame = -1
Query: 320 N*QMAEENLEQH---EVDNVTEEDN--VPEDLEQSELPPSEEVHEPENEPVIPEDKKWPG 156
N Q+ + LEQ EV+N+ E N +PE LE ++VH + V+ E KKWPG
Sbjct: 26 NAQVHDITLEQENAQEVENLHELQNEHIPETLESEP----KQVHIEDPLTVVSE-KKWPG 80
Query: 155 WPGENVFRMLVPVQKVGGIIGRKGEYIKKVCEEAKARIKILDGPPGTTERA 3
WPGE+VFRMLVP QKVG IIGRKGE+IKK+ EE +ARIKILDGPPGT ERA
Sbjct: 81 WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERA 131