BLASTX nr result
ID: Catharanthus22_contig00010891
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00010891
(263 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264430.1| PREDICTED: 30S ribosomal protein S1 homolog ... 128 9e-28
emb|CAN68483.1| hypothetical protein VITISV_006784 [Vitis vinifera] 128 9e-28
ref|XP_004248019.1| PREDICTED: 4-hydroxy-3-methylbut-2-enyl diph... 125 8e-27
gb|ESW35780.1| hypothetical protein PHAVU_001G264000g [Phaseolus... 124 1e-26
ref|XP_006358800.1| PREDICTED: uncharacterized protein LOC102601... 124 2e-26
gb|EOY05066.1| Nucleic acid-binding proteins superfamily isoform... 123 2e-26
ref|XP_003553029.2| PREDICTED: uncharacterized protein LOC100798... 122 5e-26
ref|XP_006297744.1| hypothetical protein CARUB_v10013779mg, part... 120 2e-25
gb|AFK42776.1| unknown [Medicago truncatula] 120 2e-25
ref|XP_003537529.1| PREDICTED: rRNA biogenesis protein RRP5-like... 120 2e-25
ref|XP_003601737.1| Polyribonucleotide nucleotidyltransferase [M... 120 2e-25
ref|XP_004156938.1| PREDICTED: 30S ribosomal protein S1-like [Cu... 119 6e-25
ref|XP_004152109.1| PREDICTED: 30S ribosomal protein S1-like [Cu... 119 6e-25
gb|EXB87082.1| 30S ribosomal protein S1 [Morus notabilis] 117 2e-24
gb|EMJ23404.1| hypothetical protein PRUPE_ppa009736mg [Prunus pe... 117 2e-24
ref|NP_566737.1| ribosomal protein S1-like RNA-binding domain-co... 116 3e-24
ref|XP_002518629.1| hypothetical protein RCOM_1307020 [Ricinus c... 116 3e-24
ref|XP_006492978.1| PREDICTED: 30S ribosomal protein S1, chlorop... 116 4e-24
ref|XP_006492976.1| PREDICTED: 30S ribosomal protein S1, chlorop... 116 4e-24
ref|XP_006421065.1| hypothetical protein CICLE_v10005159mg [Citr... 116 4e-24
>ref|XP_002264430.1| PREDICTED: 30S ribosomal protein S1 homolog [Vitis vinifera]
gi|296089601|emb|CBI39420.3| unnamed protein product
[Vitis vinifera]
Length = 390
Score = 128 bits (321), Expect = 9e-28
Identities = 67/90 (74%), Positives = 72/90 (80%), Gaps = 3/90 (3%)
Frame = +3
Query: 3 DASVGSD---VDDDYEIEPLPGLDTILEELSQEEGINVVKISRQGFERRVVSQDLQLWLS 173
D S G D D Y+IEPLPGL+TI EEL QEEGI+ V+ISRQGFE+RVVSQDLQLWLS
Sbjct: 286 DGSTGPDSLRTSDSYDIEPLPGLETIFEELLQEEGISDVRISRQGFEKRVVSQDLQLWLS 345
Query: 174 NVPPTGDQFTLLARAGRQVQEIQLLTSLDQ 263
N P QFTLLARAGRQVQEIQL TSLDQ
Sbjct: 346 NAPAVDKQFTLLARAGRQVQEIQLTTSLDQ 375
>emb|CAN68483.1| hypothetical protein VITISV_006784 [Vitis vinifera]
Length = 418
Score = 128 bits (321), Expect = 9e-28
Identities = 67/90 (74%), Positives = 72/90 (80%), Gaps = 3/90 (3%)
Frame = +3
Query: 3 DASVGSD---VDDDYEIEPLPGLDTILEELSQEEGINVVKISRQGFERRVVSQDLQLWLS 173
D S G D D Y+IEPLPGL+TI EEL QEEGI+ V+ISRQGFE+RVVSQDLQLWLS
Sbjct: 314 DGSTGPDSLRTSDSYDIEPLPGLETIFEELLQEEGISDVRISRQGFEKRVVSQDLQLWLS 373
Query: 174 NVPPTGDQFTLLARAGRQVQEIQLLTSLDQ 263
N P QFTLLARAGRQVQEIQL TSLDQ
Sbjct: 374 NAPAVDKQFTLLARAGRQVQEIQLTTSLDQ 403
>ref|XP_004248019.1| PREDICTED: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase-like
[Solanum lycopersicum]
Length = 390
Score = 125 bits (313), Expect = 8e-27
Identities = 67/90 (74%), Positives = 73/90 (81%), Gaps = 3/90 (3%)
Frame = +3
Query: 3 DASVGS---DVDDDYEIEPLPGLDTILEELSQEEGINVVKISRQGFERRVVSQDLQLWLS 173
DASV D + IEPLPGL+TI+EEL QE+GI + ISRQGFE+RVVSQDLQLWLS
Sbjct: 286 DASVHKNSLDSNGSLVIEPLPGLETIIEELMQEDGIYDILISRQGFEKRVVSQDLQLWLS 345
Query: 174 NVPPTGDQFTLLARAGRQVQEIQLLTSLDQ 263
N P TGDQFTLLARAGRQVQEIQL TSLDQ
Sbjct: 346 NAPATGDQFTLLARAGRQVQEIQLTTSLDQ 375
>gb|ESW35780.1| hypothetical protein PHAVU_001G264000g [Phaseolus vulgaris]
Length = 391
Score = 124 bits (311), Expect = 1e-26
Identities = 65/87 (74%), Positives = 72/87 (82%)
Frame = +3
Query: 3 DASVGSDVDDDYEIEPLPGLDTILEELSQEEGINVVKISRQGFERRVVSQDLQLWLSNVP 182
D+ G D D IEPLPGL+TILEEL QE+GI+ V+ISRQGFE+RVVSQDLQLWLSN P
Sbjct: 293 DSLGGGDGDS---IEPLPGLETILEELQQEDGISDVRISRQGFEKRVVSQDLQLWLSNAP 349
Query: 183 PTGDQFTLLARAGRQVQEIQLLTSLDQ 263
PT +FTLLARAGRQVQEI L TSLDQ
Sbjct: 350 PTNQRFTLLARAGRQVQEIHLTTSLDQ 376
>ref|XP_006358800.1| PREDICTED: uncharacterized protein LOC102601873 [Solanum tuberosum]
Length = 390
Score = 124 bits (310), Expect = 2e-26
Identities = 67/90 (74%), Positives = 74/90 (82%), Gaps = 3/90 (3%)
Frame = +3
Query: 3 DASVGS---DVDDDYEIEPLPGLDTILEELSQEEGINVVKISRQGFERRVVSQDLQLWLS 173
DASV + D + IEPLPGL+TI+EEL QE+GI + ISRQGFE+RVVSQDLQLWLS
Sbjct: 286 DASVHTNSLDSNGSSIIEPLPGLETIIEELLQEDGIYDIIISRQGFEKRVVSQDLQLWLS 345
Query: 174 NVPPTGDQFTLLARAGRQVQEIQLLTSLDQ 263
N P TGDQFTLLARAGRQVQEIQL TSLDQ
Sbjct: 346 NAPATGDQFTLLARAGRQVQEIQLTTSLDQ 375
>gb|EOY05066.1| Nucleic acid-binding proteins superfamily isoform 1 [Theobroma
cacao]
Length = 393
Score = 123 bits (309), Expect = 2e-26
Identities = 65/90 (72%), Positives = 72/90 (80%), Gaps = 3/90 (3%)
Frame = +3
Query: 3 DASVGSD---VDDDYEIEPLPGLDTILEELSQEEGINVVKISRQGFERRVVSQDLQLWLS 173
D S GSD + IEPLPGLDTI +EL QE GI+ V+ISRQGFE+RVVSQDLQLWLS
Sbjct: 289 DGSAGSDSLTTSNGSTIEPLPGLDTIFKELLQENGIDDVRISRQGFEKRVVSQDLQLWLS 348
Query: 174 NVPPTGDQFTLLARAGRQVQEIQLLTSLDQ 263
N PP+ + FTLLARAGRQVQEIQL TSLDQ
Sbjct: 349 NAPPSDNMFTLLARAGRQVQEIQLTTSLDQ 378
>ref|XP_003553029.2| PREDICTED: uncharacterized protein LOC100798303 [Glycine max]
Length = 422
Score = 122 bits (306), Expect = 5e-26
Identities = 62/78 (79%), Positives = 67/78 (85%)
Frame = +3
Query: 30 DDYEIEPLPGLDTILEELSQEEGINVVKISRQGFERRVVSQDLQLWLSNVPPTGDQFTLL 209
D IEPLPGL+TILEEL QE+GI V+ISRQGFE+RVVSQDLQLWLSN PPT +FTLL
Sbjct: 330 DSGSIEPLPGLETILEELLQEDGIYDVRISRQGFEKRVVSQDLQLWLSNAPPTNQRFTLL 389
Query: 210 ARAGRQVQEIQLLTSLDQ 263
ARAGRQVQEI L TSLDQ
Sbjct: 390 ARAGRQVQEIHLTTSLDQ 407
>ref|XP_006297744.1| hypothetical protein CARUB_v10013779mg, partial [Capsella rubella]
gi|482566453|gb|EOA30642.1| hypothetical protein
CARUB_v10013779mg, partial [Capsella rubella]
Length = 424
Score = 120 bits (301), Expect = 2e-25
Identities = 63/90 (70%), Positives = 73/90 (81%), Gaps = 3/90 (3%)
Frame = +3
Query: 3 DASVGS---DVDDDYEIEPLPGLDTILEELSQEEGINVVKISRQGFERRVVSQDLQLWLS 173
D+S GS D+ +IEPLPGL+TILEEL +EEGI VKI+RQGFE+RVVSQDLQLWLS
Sbjct: 320 DSSTGSPSLSSDNGDKIEPLPGLETILEELLKEEGIEAVKINRQGFEKRVVSQDLQLWLS 379
Query: 174 NVPPTGDQFTLLARAGRQVQEIQLLTSLDQ 263
N PP+ +F LLARAGRQVQEI L TSL+Q
Sbjct: 380 NTPPSDGKFVLLARAGRQVQEIHLTTSLEQ 409
>gb|AFK42776.1| unknown [Medicago truncatula]
Length = 399
Score = 120 bits (301), Expect = 2e-25
Identities = 60/74 (81%), Positives = 65/74 (87%)
Frame = +3
Query: 42 IEPLPGLDTILEELSQEEGINVVKISRQGFERRVVSQDLQLWLSNVPPTGDQFTLLARAG 221
I+PLPGLDTILEEL QE+GIN +ISRQGFE+RVVSQDLQLWLSN PP +FTLLARAG
Sbjct: 311 IDPLPGLDTILEELLQEDGINEARISRQGFEKRVVSQDLQLWLSNAPPMDQRFTLLARAG 370
Query: 222 RQVQEIQLLTSLDQ 263
RQVQEI L TSLDQ
Sbjct: 371 RQVQEIHLKTSLDQ 384
>ref|XP_003537529.1| PREDICTED: rRNA biogenesis protein RRP5-like isoform X1 [Glycine
max]
Length = 383
Score = 120 bits (301), Expect = 2e-25
Identities = 61/78 (78%), Positives = 66/78 (84%)
Frame = +3
Query: 30 DDYEIEPLPGLDTILEELSQEEGINVVKISRQGFERRVVSQDLQLWLSNVPPTGDQFTLL 209
D IEPLPGL+TILEEL QE+GI V+ISRQGFE+RVVSQDLQLWL N PPT +FTLL
Sbjct: 291 DSGSIEPLPGLETILEELLQEDGIYDVRISRQGFEKRVVSQDLQLWLCNAPPTNQRFTLL 350
Query: 210 ARAGRQVQEIQLLTSLDQ 263
ARAGRQVQEI L TSLDQ
Sbjct: 351 ARAGRQVQEIHLTTSLDQ 368
>ref|XP_003601737.1| Polyribonucleotide nucleotidyltransferase [Medicago truncatula]
gi|355490785|gb|AES71988.1| Polyribonucleotide
nucleotidyltransferase [Medicago truncatula]
Length = 399
Score = 120 bits (301), Expect = 2e-25
Identities = 60/74 (81%), Positives = 65/74 (87%)
Frame = +3
Query: 42 IEPLPGLDTILEELSQEEGINVVKISRQGFERRVVSQDLQLWLSNVPPTGDQFTLLARAG 221
I+PLPGLDTILEEL QE+GIN +ISRQGFE+RVVSQDLQLWLSN PP +FTLLARAG
Sbjct: 311 IDPLPGLDTILEELLQEDGINEARISRQGFEKRVVSQDLQLWLSNAPPMDQRFTLLARAG 370
Query: 222 RQVQEIQLLTSLDQ 263
RQVQEI L TSLDQ
Sbjct: 371 RQVQEIHLKTSLDQ 384
>ref|XP_004156938.1| PREDICTED: 30S ribosomal protein S1-like [Cucumis sativus]
Length = 379
Score = 119 bits (297), Expect = 6e-25
Identities = 60/77 (77%), Positives = 67/77 (87%)
Frame = +3
Query: 33 DYEIEPLPGLDTILEELSQEEGINVVKISRQGFERRVVSQDLQLWLSNVPPTGDQFTLLA 212
D EI PLPGL+TI+EEL QEEGI V+++RQGFE+RVVSQDLQLWLSN PP +FTLLA
Sbjct: 288 DSEIIPLPGLETIIEELLQEEGIVDVRVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLA 347
Query: 213 RAGRQVQEIQLLTSLDQ 263
RAGRQVQEIQL TSLDQ
Sbjct: 348 RAGRQVQEIQLTTSLDQ 364
>ref|XP_004152109.1| PREDICTED: 30S ribosomal protein S1-like [Cucumis sativus]
Length = 378
Score = 119 bits (297), Expect = 6e-25
Identities = 60/77 (77%), Positives = 67/77 (87%)
Frame = +3
Query: 33 DYEIEPLPGLDTILEELSQEEGINVVKISRQGFERRVVSQDLQLWLSNVPPTGDQFTLLA 212
D EI PLPGL+TI+EEL QEEGI V+++RQGFE+RVVSQDLQLWLSN PP +FTLLA
Sbjct: 287 DSEIIPLPGLETIIEELLQEEGIVDVRVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLA 346
Query: 213 RAGRQVQEIQLLTSLDQ 263
RAGRQVQEIQL TSLDQ
Sbjct: 347 RAGRQVQEIQLTTSLDQ 363
>gb|EXB87082.1| 30S ribosomal protein S1 [Morus notabilis]
Length = 363
Score = 117 bits (293), Expect = 2e-24
Identities = 59/87 (67%), Positives = 70/87 (80%)
Frame = +3
Query: 3 DASVGSDVDDDYEIEPLPGLDTILEELSQEEGINVVKISRQGFERRVVSQDLQLWLSNVP 182
D+S + + IEPLPGL+TI EEL +E+GI+ V+I+RQGFE+RVVSQDLQLWLSN P
Sbjct: 262 DSSDSLSISNGSNIEPLPGLETIFEELLREDGIDDVRITRQGFEKRVVSQDLQLWLSNAP 321
Query: 183 PTGDQFTLLARAGRQVQEIQLLTSLDQ 263
+FTLLARAGRQVQEIQL TSLDQ
Sbjct: 322 TLNQKFTLLARAGRQVQEIQLTTSLDQ 348
>gb|EMJ23404.1| hypothetical protein PRUPE_ppa009736mg [Prunus persica]
Length = 280
Score = 117 bits (293), Expect = 2e-24
Identities = 61/90 (67%), Positives = 71/90 (78%), Gaps = 3/90 (3%)
Frame = +3
Query: 3 DASVGSD---VDDDYEIEPLPGLDTILEELSQEEGINVVKISRQGFERRVVSQDLQLWLS 173
D SVG D D+ IEPLPGL+ I EEL +E+GI+ V+I+RQGFE+RVVSQDLQLWLS
Sbjct: 176 DGSVGPDSLSTDNSSNIEPLPGLEAIFEELVREDGIDDVRINRQGFEKRVVSQDLQLWLS 235
Query: 174 NVPPTGDQFTLLARAGRQVQEIQLLTSLDQ 263
N P +FTLLARAGRQVQEIQL T+LDQ
Sbjct: 236 NSPAVNQKFTLLARAGRQVQEIQLTTTLDQ 265
>ref|NP_566737.1| ribosomal protein S1-like RNA-binding domain-containing protein
[Arabidopsis thaliana] gi|9293944|dbj|BAB01847.1|
unnamed protein product [Arabidopsis thaliana]
gi|15146284|gb|AAK83625.1| AT3g23700/MYM9_3 [Arabidopsis
thaliana] gi|22655022|gb|AAM98102.1| At3g23700/MYM9_3
[Arabidopsis thaliana] gi|332643282|gb|AEE76803.1|
ribosomal protein S1-like RNA-binding domain-containing
protein [Arabidopsis thaliana]
Length = 392
Score = 116 bits (291), Expect = 3e-24
Identities = 61/90 (67%), Positives = 72/90 (80%), Gaps = 3/90 (3%)
Frame = +3
Query: 3 DASVGS---DVDDDYEIEPLPGLDTILEELSQEEGINVVKISRQGFERRVVSQDLQLWLS 173
D+S GS ++ IEPLPGL+TILEEL +E+GI VKI+RQGFE+RVVSQDLQLWLS
Sbjct: 288 DSSTGSPSLSSNNGDTIEPLPGLETILEELLKEDGIEAVKINRQGFEKRVVSQDLQLWLS 347
Query: 174 NVPPTGDQFTLLARAGRQVQEIQLLTSLDQ 263
N PP+ +F LLARAGRQVQEI L TSL+Q
Sbjct: 348 NTPPSDGKFVLLARAGRQVQEIHLTTSLEQ 377
>ref|XP_002518629.1| hypothetical protein RCOM_1307020 [Ricinus communis]
gi|223542228|gb|EEF43771.1| hypothetical protein
RCOM_1307020 [Ricinus communis]
Length = 365
Score = 116 bits (291), Expect = 3e-24
Identities = 59/90 (65%), Positives = 70/90 (77%), Gaps = 3/90 (3%)
Frame = +3
Query: 3 DASVGSD---VDDDYEIEPLPGLDTILEELSQEEGINVVKISRQGFERRVVSQDLQLWLS 173
D SVG D D IEPLPGL+ I++EL +E+G++ V+I+RQGFE+R VSQDLQLWLS
Sbjct: 261 DGSVGLDPMATDSSNTIEPLPGLEVIIQELLREDGVDDVRINRQGFEKRAVSQDLQLWLS 320
Query: 174 NVPPTGDQFTLLARAGRQVQEIQLLTSLDQ 263
N PP FTLLARAGRQVQEIQL T+LDQ
Sbjct: 321 NAPPVNRMFTLLARAGRQVQEIQLTTTLDQ 350
>ref|XP_006492978.1| PREDICTED: 30S ribosomal protein S1, chloroplastic-like isoform X3
[Citrus sinensis]
Length = 257
Score = 116 bits (290), Expect = 4e-24
Identities = 58/74 (78%), Positives = 65/74 (87%)
Frame = +3
Query: 42 IEPLPGLDTILEELSQEEGINVVKISRQGFERRVVSQDLQLWLSNVPPTGDQFTLLARAG 221
IEPLPGL I EEL QE+GI+ V+I+RQGFE+RVVSQDLQLWLSN PP+G +FTLLARAG
Sbjct: 169 IEPLPGLGAIFEELLQEDGIDDVRITRQGFEKRVVSQDLQLWLSNAPPSGKKFTLLARAG 228
Query: 222 RQVQEIQLLTSLDQ 263
RQVQEIQL T LDQ
Sbjct: 229 RQVQEIQLSTFLDQ 242
>ref|XP_006492976.1| PREDICTED: 30S ribosomal protein S1, chloroplastic-like isoform X1
[Citrus sinensis]
Length = 387
Score = 116 bits (290), Expect = 4e-24
Identities = 58/74 (78%), Positives = 65/74 (87%)
Frame = +3
Query: 42 IEPLPGLDTILEELSQEEGINVVKISRQGFERRVVSQDLQLWLSNVPPTGDQFTLLARAG 221
IEPLPGL I EEL QE+GI+ V+I+RQGFE+RVVSQDLQLWLSN PP+G +FTLLARAG
Sbjct: 299 IEPLPGLGAIFEELLQEDGIDDVRITRQGFEKRVVSQDLQLWLSNAPPSGKKFTLLARAG 358
Query: 222 RQVQEIQLLTSLDQ 263
RQVQEIQL T LDQ
Sbjct: 359 RQVQEIQLSTFLDQ 372
>ref|XP_006421065.1| hypothetical protein CICLE_v10005159mg [Citrus clementina]
gi|557522938|gb|ESR34305.1| hypothetical protein
CICLE_v10005159mg [Citrus clementina]
Length = 383
Score = 116 bits (290), Expect = 4e-24
Identities = 58/74 (78%), Positives = 65/74 (87%)
Frame = +3
Query: 42 IEPLPGLDTILEELSQEEGINVVKISRQGFERRVVSQDLQLWLSNVPPTGDQFTLLARAG 221
IEPLPGL I EEL QE+GI+ V+I+RQGFE+RVVSQDLQLWLSN PP+G +FTLLARAG
Sbjct: 295 IEPLPGLGAIFEELLQEDGIDDVRITRQGFEKRVVSQDLQLWLSNAPPSGKKFTLLARAG 354
Query: 222 RQVQEIQLLTSLDQ 263
RQVQEIQL T LDQ
Sbjct: 355 RQVQEIQLSTFLDQ 368