BLASTX nr result

ID: Catharanthus22_contig00010839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00010839
         (232 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGC78944.1| hypothetical protein (mitochondrion) [Vicia faba]       54   1e-15
ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncat...    54   3e-15
gb|EXB92316.1| hypothetical protein L484_004636 [Morus notabilis]      60   3e-07
ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ...    59   5e-07

>gb|AGC78944.1| hypothetical protein (mitochondrion) [Vicia faba]
          Length = 134

 Score = 54.3 bits (129), Expect(2) = 1e-15
 Identities = 31/49 (63%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
 Frame = -1

Query: 232 LAAIKLKR*LESAS--KGAGYLLTDSTATCWHXXXXXXXXXXXXAHFGC 92
           LAAIK +R LESAS  KGAG LLTDSTATCWH            AHFGC
Sbjct: 56  LAAIKKQRTLESASNSKGAGSLLTDSTATCWHSISSAGASLGSSAHFGC 104



 Score = 54.3 bits (129), Expect(2) = 1e-15
 Identities = 26/26 (100%), Positives = 26/26 (100%)
 Frame = -2

Query: 81  LRRMSQQHKTRVSLVIGLDQTSHDTS 4
           LRRMSQQHKTRVSLVIGLDQTSHDTS
Sbjct: 109 LRRMSQQHKTRVSLVIGLDQTSHDTS 134


>ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncatula]
           gi|355477374|gb|AES58577.1| ATP synthase subunit alpha
           [Medicago truncatula]
          Length = 1116

 Score = 54.3 bits (129), Expect(2) = 3e-15
 Identities = 31/49 (63%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
 Frame = -1

Query: 232 LAAIKLKR*LESAS--KGAGYLLTDSTATCWHXXXXXXXXXXXXAHFGC 92
           LAAIK +R LESAS  KGAG LLTDSTATCWH            AHFGC
Sbjct: 766 LAAIKKQRTLESASNSKGAGSLLTDSTATCWHSISSAGASLGSSAHFGC 814



 Score = 52.8 bits (125), Expect(2) = 3e-15
 Identities = 25/25 (100%), Positives = 25/25 (100%)
 Frame = -2

Query: 81  LRRMSQQHKTRVSLVIGLDQTSHDT 7
           LRRMSQQHKTRVSLVIGLDQTSHDT
Sbjct: 819 LRRMSQQHKTRVSLVIGLDQTSHDT 843


>gb|EXB92316.1| hypothetical protein L484_004636 [Morus notabilis]
          Length = 202

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 29/33 (87%), Positives = 29/33 (87%)
 Frame = +1

Query: 1   SARVVRCLVKSYNERNPRFVLLRHAPKAAKGNR 99
           SARVVRCLVKSYNERNPRFVLLRHAPK   G R
Sbjct: 78  SARVVRCLVKSYNERNPRFVLLRHAPKEMVGFR 110


>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
           gi|355477385|gb|AES58588.1| Ribosomal protein S10
           [Medicago truncatula]
          Length = 1152

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 32/54 (59%), Positives = 35/54 (64%), Gaps = 12/54 (22%)
 Frame = +1

Query: 1   SARVVRCLVKSYNERNPRFVLLRHAPK------------AAKGNRSEPRSRVTC 126
           SARVVRCLVKSYNERNPRFVLLRHAPK            A+K   +  RS + C
Sbjct: 322 SARVVRCLVKSYNERNPRFVLLRHAPKEKVFATEVSRGLASKKTDARTRSSIPC 375


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