BLASTX nr result
ID: Catharanthus22_contig00010733
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus22_contig00010733 (1454 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Ci... 65 7e-18 ref|XP_004241021.1| PREDICTED: DNA repair protein XRCC4-like iso... 58 3e-17 ref|XP_006420162.1| hypothetical protein CICLE_v10005690mg [Citr... 65 7e-17 ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus ... 59 2e-16 ref|XP_006420172.1| hypothetical protein CICLE_v10007171mg, part... 63 3e-16 gb|EXB29874.1| DNA repair protein XRCC4 [Morus notabilis] 58 1e-15 ref|XP_004290387.1| PREDICTED: DNA repair protein XRCC4-like iso... 59 2e-15 ref|XP_003590794.1| DNA repair protein XRCC4 [Medicago truncatul... 58 5e-15 ref|XP_004290386.1| PREDICTED: DNA repair protein XRCC4-like iso... 57 6e-15 gb|EMJ27301.1| hypothetical protein PRUPE_ppa010906mg [Prunus pe... 56 6e-15 gb|EPS69900.1| hypothetical protein M569_04862, partial [Genlise... 55 6e-15 ref|XP_006298402.1| hypothetical protein CARUB_v10014474mg [Caps... 59 1e-14 ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis v... 59 1e-14 emb|CBI26376.3| unnamed protein product [Vitis vinifera] 59 1e-14 ref|XP_006378355.1| hypothetical protein POPTR_0010s08650g [Popu... 57 2e-14 dbj|BAF03494.1| XRCC4 homolog [Populus nigra] 57 2e-14 ref|XP_002315726.1| predicted protein [Populus trichocarpa] 57 2e-14 ref|XP_004136882.1| PREDICTED: DNA repair protein XRCC4-like [Cu... 57 2e-14 ref|XP_002883399.1| hypothetical protein ARALYDRAFT_479818 [Arab... 58 4e-14 ref|XP_004495346.1| PREDICTED: DNA repair protein XRCC4-like [Ci... 54 9e-14 >ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Citrus sinensis] Length = 256 Score = 65.5 bits (158), Expect(2) = 7e-18 Identities = 29/41 (70%), Positives = 32/41 (78%) Frame = -3 Query: 342 IVDYIDLAQRCLGFQQPGSVYGFLDARGDCKRLSWTFENGG 220 + +YI LA+R LGFQQPGSVYGF DA CKRLSWTFE G Sbjct: 61 VTEYIKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEG 101 Score = 53.5 bits (127), Expect(2) = 7e-18 Identities = 23/33 (69%), Positives = 27/33 (81%) Frame = -2 Query: 217 KLEWRWKVQPSPYSKKTTEDVLDFLMDANIQLN 119 KLEWRWK P+P SKK T +LDFLMDANI+L+ Sbjct: 103 KLEWRWKCGPAPNSKKVTAGILDFLMDANIRLS 135 >ref|XP_004241021.1| PREDICTED: DNA repair protein XRCC4-like isoform 1 [Solanum lycopersicum] Length = 254 Score = 58.2 bits (139), Expect(3) = 3e-17 Identities = 27/41 (65%), Positives = 31/41 (75%) Frame = -3 Query: 342 IVDYIDLAQRCLGFQQPGSVYGFLDARGDCKRLSWTFENGG 220 + +YIDL ++ LGFQQPGSVYGF DA KRLSWTFE G Sbjct: 63 VSEYIDLGEKYLGFQQPGSVYGFDDAGTGHKRLSWTFEKEG 103 Score = 56.2 bits (134), Expect(3) = 3e-17 Identities = 27/41 (65%), Positives = 30/41 (73%) Frame = -2 Query: 217 KLEWRWKVQPSPYSKKTTEDVLDFLMDANIQLNTLAELKEE 95 KLEWRWK Q S SKKTT D+LDFLMDANI+L+ K E Sbjct: 105 KLEWRWKCQSSSNSKKTTADILDFLMDANIRLSDEVVSKTE 145 Score = 22.3 bits (46), Expect(3) = 3e-17 Identities = 10/14 (71%), Positives = 11/14 (78%) Frame = -1 Query: 383 SVEEIEERASHSDQ 342 S EE+EERAS DQ Sbjct: 48 SEEEVEERASQWDQ 61 >ref|XP_006420162.1| hypothetical protein CICLE_v10005690mg [Citrus clementina] gi|557522035|gb|ESR33402.1| hypothetical protein CICLE_v10005690mg [Citrus clementina] Length = 256 Score = 65.1 bits (157), Expect(2) = 7e-17 Identities = 28/41 (68%), Positives = 32/41 (78%) Frame = -3 Query: 342 IVDYIDLAQRCLGFQQPGSVYGFLDARGDCKRLSWTFENGG 220 + +Y+ LA+R LGFQQPGSVYGF DA CKRLSWTFE G Sbjct: 62 VTEYVKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEG 102 Score = 50.4 bits (119), Expect(2) = 7e-17 Identities = 22/33 (66%), Positives = 26/33 (78%) Frame = -2 Query: 217 KLEWRWKVQPSPYSKKTTEDVLDFLMDANIQLN 119 KLEWRWK +P SKK T +LDFLMDANI+L+ Sbjct: 104 KLEWRWKCGSAPNSKKVTAGILDFLMDANIRLS 136 >ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus communis] gi|223543643|gb|EEF45171.1| DNA-repair protein XRCC4, putative [Ricinus communis] Length = 265 Score = 58.9 bits (141), Expect(2) = 2e-16 Identities = 32/59 (54%), Positives = 38/59 (64%), Gaps = 10/59 (16%) Frame = -2 Query: 217 KLEWRWKVQPSPYSKKTTEDVLDFLMDANIQL--------NTLAELKEEGD--MLQKER 71 KLEWRWK QPSP +K TT +LDFLMDANI+L ++ LKEE D + Q ER Sbjct: 110 KLEWRWKCQPSPDNKMTTAGILDFLMDANIRLSEEVVKKTHSFERLKEEADKCLTQSER 168 Score = 55.5 bits (132), Expect(2) = 2e-16 Identities = 25/41 (60%), Positives = 30/41 (73%) Frame = -3 Query: 342 IVDYIDLAQRCLGFQQPGSVYGFLDARGDCKRLSWTFENGG 220 + +YI+LA+ LGFQQPGS+Y F DA KRLSWTFE G Sbjct: 68 VSEYINLAEHYLGFQQPGSIYRFADAGDSHKRLSWTFEKEG 108 >ref|XP_006420172.1| hypothetical protein CICLE_v10007171mg, partial [Citrus clementina] gi|557522045|gb|ESR33412.1| hypothetical protein CICLE_v10007171mg, partial [Citrus clementina] Length = 243 Score = 62.8 bits (151), Expect(2) = 3e-16 Identities = 27/41 (65%), Positives = 31/41 (75%) Frame = -3 Query: 342 IVDYIDLAQRCLGFQQPGSVYGFLDARGDCKRLSWTFENGG 220 + +Y+ LA+R LGFQQPGSVY F DA CKRLSWTFE G Sbjct: 48 VTEYVKLAERYLGFQQPGSVYAFTDAADGCKRLSWTFEKEG 88 Score = 50.4 bits (119), Expect(2) = 3e-16 Identities = 22/33 (66%), Positives = 26/33 (78%) Frame = -2 Query: 217 KLEWRWKVQPSPYSKKTTEDVLDFLMDANIQLN 119 KLEWRWK +P SKK T +LDFLMDANI+L+ Sbjct: 90 KLEWRWKCGSAPNSKKVTAGILDFLMDANIRLS 122 >gb|EXB29874.1| DNA repair protein XRCC4 [Morus notabilis] Length = 257 Score = 57.8 bits (138), Expect(2) = 1e-15 Identities = 25/41 (60%), Positives = 32/41 (78%) Frame = -2 Query: 217 KLEWRWKVQPSPYSKKTTEDVLDFLMDANIQLNTLAELKEE 95 KL+WRWK QP+P SKKTT + LDFLMDANI+L+ +K + Sbjct: 104 KLQWRWKCQPAPDSKKTTAETLDFLMDANIRLSEEVVIKSQ 144 Score = 53.9 bits (128), Expect(2) = 1e-15 Identities = 25/41 (60%), Positives = 29/41 (70%) Frame = -3 Query: 342 IVDYIDLAQRCLGFQQPGSVYGFLDARGDCKRLSWTFENGG 220 + +Y+ LA+R LGFQQP SVY F DA KRLSWTFE G Sbjct: 62 VPEYVALAERYLGFQQPDSVYAFADAGDGHKRLSWTFEKEG 102 >ref|XP_004290387.1| PREDICTED: DNA repair protein XRCC4-like isoform 2 [Fragaria vesca subsp. vesca] Length = 218 Score = 58.5 bits (140), Expect(2) = 2e-15 Identities = 28/49 (57%), Positives = 35/49 (71%) Frame = -2 Query: 217 KLEWRWKVQPSPYSKKTTEDVLDFLMDANIQLNTLAELKEEGDMLQKER 71 KLEWRWK +PSP SK+TT VLDFLMDAN+ L+ L L + L++ R Sbjct: 108 KLEWRWKCEPSPNSKETTAAVLDFLMDANVGLSFLGVLNSKKTKLRELR 156 Score = 52.4 bits (124), Expect(2) = 2e-15 Identities = 24/41 (58%), Positives = 28/41 (68%) Frame = -3 Query: 342 IVDYIDLAQRCLGFQQPGSVYGFLDARGDCKRLSWTFENGG 220 + DY+ LA+R LGFQ P SVY F DA KRLSWTF+ G Sbjct: 66 VPDYVSLAERYLGFQHPDSVYKFTDAGDGHKRLSWTFDKEG 106 >ref|XP_003590794.1| DNA repair protein XRCC4 [Medicago truncatula] gi|355479842|gb|AES61045.1| DNA repair protein XRCC4 [Medicago truncatula] Length = 256 Score = 57.8 bits (138), Expect(2) = 5e-15 Identities = 25/43 (58%), Positives = 33/43 (76%) Frame = -3 Query: 342 IVDYIDLAQRCLGFQQPGSVYGFLDARGDCKRLSWTFENGGLS 214 + +Y++L++R LGFQQP SVY F DA KRLSWTFE GG++ Sbjct: 62 VEEYVELSERYLGFQQPESVYAFADAGDAHKRLSWTFEKGGMT 104 Score = 51.6 bits (122), Expect(2) = 5e-15 Identities = 24/45 (53%), Positives = 30/45 (66%) Frame = -2 Query: 229 KWRIKLEWRWKVQPSPYSKKTTEDVLDFLMDANIQLNTLAELKEE 95 K + L WRWK SP KKTT ++LDFLMDANI+L+ +K E Sbjct: 100 KGGMTLHWRWKCMKSPDCKKTTAEILDFLMDANIRLSEEVVIKTE 144 >ref|XP_004290386.1| PREDICTED: DNA repair protein XRCC4-like isoform 1 [Fragaria vesca subsp. vesca] Length = 259 Score = 56.6 bits (135), Expect(2) = 6e-15 Identities = 31/59 (52%), Positives = 38/59 (64%), Gaps = 10/59 (16%) Frame = -2 Query: 217 KLEWRWKVQPSPYSKKTTEDVLDFLMDANIQLN--------TLAELKEEGDM--LQKER 71 KLEWRWK +PSP SK+TT VLDFLMDAN+ L+ + LK E +M +Q ER Sbjct: 108 KLEWRWKCEPSPNSKETTAAVLDFLMDANVGLSEEVVRKTQSFERLKVEAEMCLIQSER 166 Score = 52.4 bits (124), Expect(2) = 6e-15 Identities = 24/41 (58%), Positives = 28/41 (68%) Frame = -3 Query: 342 IVDYIDLAQRCLGFQQPGSVYGFLDARGDCKRLSWTFENGG 220 + DY+ LA+R LGFQ P SVY F DA KRLSWTF+ G Sbjct: 66 VPDYVSLAERYLGFQHPDSVYKFTDAGDGHKRLSWTFDKEG 106 >gb|EMJ27301.1| hypothetical protein PRUPE_ppa010906mg [Prunus persica] Length = 231 Score = 56.2 bits (134), Expect(2) = 6e-15 Identities = 25/33 (75%), Positives = 28/33 (84%) Frame = -2 Query: 217 KLEWRWKVQPSPYSKKTTEDVLDFLMDANIQLN 119 KLEWRWK QPSP SK+TT VLDFLMDAN+ L+ Sbjct: 158 KLEWRWKCQPSPNSKQTTAAVLDFLMDANVGLS 190 Score = 52.8 bits (125), Expect(2) = 6e-15 Identities = 24/41 (58%), Positives = 28/41 (68%) Frame = -3 Query: 342 IVDYIDLAQRCLGFQQPGSVYGFLDARGDCKRLSWTFENGG 220 + +Y+ LA+R LGFQ P S YGF DA KRLSWTFE G Sbjct: 116 VSEYVALAERYLGFQHPDSAYGFADAGDGHKRLSWTFEKEG 156 >gb|EPS69900.1| hypothetical protein M569_04862, partial [Genlisea aurea] Length = 203 Score = 55.5 bits (132), Expect(2) = 6e-15 Identities = 23/34 (67%), Positives = 31/34 (91%) Frame = -2 Query: 220 IKLEWRWKVQPSPYSKKTTEDVLDFLMDANIQLN 119 +KLEWRWK+QPS SKKTT ++++FLMDANI+L+ Sbjct: 101 MKLEWRWKLQPSSNSKKTTAEMMEFLMDANIRLS 134 Score = 53.5 bits (127), Expect(2) = 6e-15 Identities = 24/40 (60%), Positives = 29/40 (72%) Frame = -3 Query: 336 DYIDLAQRCLGFQQPGSVYGFLDARGDCKRLSWTFENGGL 217 DY++ A R LGFQQPGSVY DA CKR+S+TFE G+ Sbjct: 61 DYVEFAGRYLGFQQPGSVYVVSDAENGCKRVSFTFEKEGM 100 >ref|XP_006298402.1| hypothetical protein CARUB_v10014474mg [Capsella rubella] gi|482567111|gb|EOA31300.1| hypothetical protein CARUB_v10014474mg [Capsella rubella] Length = 249 Score = 59.3 bits (142), Expect(2) = 1e-14 Identities = 25/41 (60%), Positives = 32/41 (78%) Frame = -3 Query: 342 IVDYIDLAQRCLGFQQPGSVYGFLDARGDCKRLSWTFENGG 220 + +Y++LA++ LGFQQP S+YGF DA CKRLSWTFE G Sbjct: 64 VSEYLELAEQYLGFQQPDSIYGFSDALEGCKRLSWTFEKEG 104 Score = 48.9 bits (115), Expect(2) = 1e-14 Identities = 22/33 (66%), Positives = 27/33 (81%) Frame = -2 Query: 217 KLEWRWKVQPSPYSKKTTEDVLDFLMDANIQLN 119 KLEWRWK +PS SKK T VLDFLM++NI+L+ Sbjct: 106 KLEWRWKCKPSHDSKKITVGVLDFLMESNIRLS 138 >ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis vinifera] Length = 259 Score = 59.3 bits (142), Expect(2) = 1e-14 Identities = 28/41 (68%), Positives = 31/41 (75%) Frame = -3 Query: 342 IVDYIDLAQRCLGFQQPGSVYGFLDARGDCKRLSWTFENGG 220 + DYI LA+R LGFQQPGSVYGF DA +RLSWTFE G Sbjct: 63 VSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFEKEG 103 Score = 48.5 bits (114), Expect(2) = 1e-14 Identities = 23/41 (56%), Positives = 29/41 (70%) Frame = -2 Query: 217 KLEWRWKVQPSPYSKKTTEDVLDFLMDANIQLNTLAELKEE 95 KLEWRWK SP S+ TT VLDFLM+ANI+L+ +K + Sbjct: 105 KLEWRWKCGLSPDSRSTTAGVLDFLMNANIRLSEEVVIKTQ 145 >emb|CBI26376.3| unnamed protein product [Vitis vinifera] Length = 258 Score = 59.3 bits (142), Expect(2) = 1e-14 Identities = 28/41 (68%), Positives = 31/41 (75%) Frame = -3 Query: 342 IVDYIDLAQRCLGFQQPGSVYGFLDARGDCKRLSWTFENGG 220 + DYI LA+R LGFQQPGSVYGF DA +RLSWTFE G Sbjct: 63 VSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFEKEG 103 Score = 48.5 bits (114), Expect(2) = 1e-14 Identities = 23/41 (56%), Positives = 29/41 (70%) Frame = -2 Query: 217 KLEWRWKVQPSPYSKKTTEDVLDFLMDANIQLNTLAELKEE 95 KLEWRWK SP S+ TT VLDFLM+ANI+L+ +K + Sbjct: 105 KLEWRWKCGLSPDSRSTTAGVLDFLMNANIRLSEEVVIKTQ 145 >ref|XP_006378355.1| hypothetical protein POPTR_0010s08650g [Populus trichocarpa] gi|550329386|gb|ERP56152.1| hypothetical protein POPTR_0010s08650g [Populus trichocarpa] Length = 483 Score = 56.6 bits (135), Expect(2) = 2e-14 Identities = 25/33 (75%), Positives = 29/33 (87%) Frame = -2 Query: 217 KLEWRWKVQPSPYSKKTTEDVLDFLMDANIQLN 119 KLEWRWK QPSP +KKTT +LDFLMDANI+L+ Sbjct: 103 KLEWRWKCQPSPDTKKTTTLILDFLMDANIRLS 135 Score = 50.8 bits (120), Expect(2) = 2e-14 Identities = 25/38 (65%), Positives = 27/38 (71%) Frame = -3 Query: 333 YIDLAQRCLGFQQPGSVYGFLDARGDCKRLSWTFENGG 220 YI LA++ LGFQ PGSVY F DA KRLSWTFE G Sbjct: 64 YIQLAEKHLGFQIPGSVYKFTDAGEGNKRLSWTFEKEG 101 >dbj|BAF03494.1| XRCC4 homolog [Populus nigra] Length = 255 Score = 56.6 bits (135), Expect(2) = 2e-14 Identities = 25/33 (75%), Positives = 29/33 (87%) Frame = -2 Query: 217 KLEWRWKVQPSPYSKKTTEDVLDFLMDANIQLN 119 KLEWRWK QPSP +KKTT +LDFLMDANI+L+ Sbjct: 103 KLEWRWKCQPSPDTKKTTTLILDFLMDANIRLS 135 Score = 50.8 bits (120), Expect(2) = 2e-14 Identities = 25/38 (65%), Positives = 27/38 (71%) Frame = -3 Query: 333 YIDLAQRCLGFQQPGSVYGFLDARGDCKRLSWTFENGG 220 YI LA++ LGFQ PGSVY F DA KRLSWTFE G Sbjct: 64 YIQLAEKHLGFQIPGSVYKFTDAGEGNKRLSWTFEKEG 101 >ref|XP_002315726.1| predicted protein [Populus trichocarpa] Length = 233 Score = 56.6 bits (135), Expect(2) = 2e-14 Identities = 25/33 (75%), Positives = 29/33 (87%) Frame = -2 Query: 217 KLEWRWKVQPSPYSKKTTEDVLDFLMDANIQLN 119 KLEWRWK QPSP +KKTT +LDFLMDANI+L+ Sbjct: 103 KLEWRWKCQPSPDTKKTTTLILDFLMDANIRLS 135 Score = 50.8 bits (120), Expect(2) = 2e-14 Identities = 25/38 (65%), Positives = 27/38 (71%) Frame = -3 Query: 333 YIDLAQRCLGFQQPGSVYGFLDARGDCKRLSWTFENGG 220 YI LA++ LGFQ PGSVY F DA KRLSWTFE G Sbjct: 64 YIQLAEKHLGFQIPGSVYKFTDAGEGNKRLSWTFEKEG 101 >ref|XP_004136882.1| PREDICTED: DNA repair protein XRCC4-like [Cucumis sativus] gi|449478860|ref|XP_004155437.1| PREDICTED: DNA repair protein XRCC4-like [Cucumis sativus] Length = 233 Score = 57.4 bits (137), Expect(2) = 2e-14 Identities = 25/40 (62%), Positives = 30/40 (75%) Frame = -3 Query: 336 DYIDLAQRCLGFQQPGSVYGFLDARGDCKRLSWTFENGGL 217 DY+ LA+R LGFQQPGS+Y F DA KRLSWTF+ G+ Sbjct: 69 DYVALAERYLGFQQPGSIYDFADAGNGYKRLSWTFDKEGM 108 Score = 49.7 bits (117), Expect(2) = 2e-14 Identities = 21/34 (61%), Positives = 28/34 (82%) Frame = -2 Query: 220 IKLEWRWKVQPSPYSKKTTEDVLDFLMDANIQLN 119 +KLEWRWK QP+ +K TT +L+FLMDANI+L+ Sbjct: 108 MKLEWRWKCQPASDNKTTTAGILNFLMDANIRLS 141 >ref|XP_002883399.1| hypothetical protein ARALYDRAFT_479818 [Arabidopsis lyrata subsp. lyrata] gi|297329239|gb|EFH59658.1| hypothetical protein ARALYDRAFT_479818 [Arabidopsis lyrata subsp. lyrata] Length = 248 Score = 57.8 bits (138), Expect(2) = 4e-14 Identities = 26/41 (63%), Positives = 31/41 (75%) Frame = -3 Query: 342 IVDYIDLAQRCLGFQQPGSVYGFLDARGDCKRLSWTFENGG 220 + +Y++LA+R LGFQQP SVYGF DA KRLSWTFE G Sbjct: 64 VSEYLELAERYLGFQQPNSVYGFSDALEGSKRLSWTFEKEG 104 Score = 48.5 bits (114), Expect(2) = 4e-14 Identities = 21/33 (63%), Positives = 27/33 (81%) Frame = -2 Query: 217 KLEWRWKVQPSPYSKKTTEDVLDFLMDANIQLN 119 KLEWRWK +PS SKK T +LDFL++ANI+L+ Sbjct: 106 KLEWRWKCKPSHDSKKITVGILDFLLEANIRLS 138 >ref|XP_004495346.1| PREDICTED: DNA repair protein XRCC4-like [Cicer arietinum] Length = 255 Score = 54.3 bits (129), Expect(2) = 9e-14 Identities = 23/43 (53%), Positives = 31/43 (72%) Frame = -3 Query: 342 IVDYIDLAQRCLGFQQPGSVYGFLDARGDCKRLSWTFENGGLS 214 + +Y+ L++ LGFQQ GS+Y F DA KRLSWTFE GG++ Sbjct: 62 VSEYVQLSESYLGFQQHGSIYAFADAGDGHKRLSWTFEKGGMT 104 Score = 50.8 bits (120), Expect(2) = 9e-14 Identities = 25/53 (47%), Positives = 34/53 (64%) Frame = -2 Query: 229 KWRIKLEWRWKVQPSPYSKKTTEDVLDFLMDANIQLNTLAELKEEGDMLQKER 71 K + L WRWK SP KKTT +LDFLMDANI+L+ E+ + D+ +K + Sbjct: 100 KGGMTLHWRWKCMQSPDCKKTTAQILDFLMDANIRLS--EEVVRKTDLFEKTK 150