BLASTX nr result
ID: Catharanthus22_contig00010631
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00010631
(250 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK29467.1| polyprotein-like [Solanum chilense] 69 8e-10
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 66 4e-09
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 66 5e-09
gb|EOY09126.1| Uncharacterized protein TCM_024518 [Theobroma cacao] 64 2e-08
gb|EOY22705.1| Transducin/WD40 repeat-like superfamily protein [... 64 3e-08
emb|CAN69096.1| hypothetical protein VITISV_025437 [Vitis vinifera] 62 6e-08
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 62 8e-08
emb|CAN60557.1| hypothetical protein VITISV_035871 [Vitis vinifera] 62 1e-07
gb|EOY34202.1| Uncharacterized protein TCM_041944 [Theobroma cacao] 61 1e-07
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi... 61 1e-07
ref|XP_003612373.1| Glutamate receptor 3.6 [Medicago truncatula]... 61 1e-07
emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera] 61 2e-07
gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsi... 61 2e-07
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 60 2e-07
gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsi... 60 2e-07
emb|CAJ76058.1| gag protein [Cucumis melo] 60 3e-07
ref|XP_004165166.1| PREDICTED: uncharacterized protein LOC101225... 59 5e-07
emb|CAN72864.1| hypothetical protein VITISV_029730 [Vitis vinifera] 59 5e-07
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 59 5e-07
ref|XP_006397138.1| hypothetical protein EUTSA_v10029300mg [Eutr... 59 7e-07
>gb|AAK29467.1| polyprotein-like [Solanum chilense]
Length = 1328
Score = 68.6 bits (166), Expect = 8e-10
Identities = 36/77 (46%), Positives = 50/77 (64%)
Frame = +3
Query: 9 AICSPEKYPESWKGEILSEKLGDAHSCLTLHLTDNVLREIDEKDNAFEIWTKLEKLYLGK 188
A+ K PES K E E A S + LHLTD+V+ I ++++A IWTKLE LY+ K
Sbjct: 37 ALGGKSKKPESMKLEDWEELDEKAASAIRLHLTDDVVNNIVDEESACGIWTKLENLYMSK 96
Query: 189 SLSNKIYLKEQLFGFKM 239
+L+NK+YLK+QL+ M
Sbjct: 97 TLTNKLYLKKQLYTLHM 113
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
TNT 1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 66.2 bits (160), Expect = 4e-09
Identities = 32/72 (44%), Positives = 49/72 (68%)
Frame = +3
Query: 27 KYPESWKGEILSEKLGDAHSCLTLHLTDNVLREIDEKDNAFEIWTKLEKLYLGKSLSNKI 206
K P++ K E ++ A S + LHL+D+V+ I ++D A IWT+LE LY+ K+L+NK+
Sbjct: 42 KKPDTMKAEDWADLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKL 101
Query: 207 YLKEQLFGFKMS 242
YLK+QL+ MS
Sbjct: 102 YLKKQLYALHMS 113
>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
Length = 1297
Score = 65.9 bits (159), Expect = 5e-09
Identities = 33/69 (47%), Positives = 41/69 (59%)
Frame = +3
Query: 33 PESWKGEILSEKLGDAHSCLTLHLTDNVLREIDEKDNAFEIWTKLEKLYLGKSLSNKIYL 212
P + + ++K SC+ LHL DNVL I E A E W LE +Y GKS+ NK+ L
Sbjct: 18 PTNMSDVLWTKKNKKTKSCIELHLADNVLLHIGETMTAKEAWENLESVYKGKSIGNKLLL 77
Query: 213 KEQLFGFKM 239
KEQLFG KM
Sbjct: 78 KEQLFGLKM 86
>gb|EOY09126.1| Uncharacterized protein TCM_024518 [Theobroma cacao]
Length = 277
Score = 63.9 bits (154), Expect = 2e-08
Identities = 29/74 (39%), Positives = 51/74 (68%)
Frame = +3
Query: 21 PEKYPESWKGEILSEKLGDAHSCLTLHLTDNVLREIDEKDNAFEIWTKLEKLYLGKSLSN 200
P +S K +++ + AHS + L L+D VLRE+ ++++A +W KLE +Y+ KSL+N
Sbjct: 46 PSNLSDSEKDDLMEK----AHSAILLTLSDEVLREVTDEESAAAMWFKLESIYITKSLTN 101
Query: 201 KIYLKEQLFGFKMS 242
++Y+K++L+ KMS
Sbjct: 102 RLYMKQRLYTLKMS 115
>gb|EOY22705.1| Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
Length = 1029
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/78 (37%), Positives = 50/78 (64%)
Frame = +3
Query: 9 AICSPEKYPESWKGEILSEKLGDAHSCLTLHLTDNVLREIDEKDNAFEIWTKLEKLYLGK 188
A+ E P + + + AHS + L L+D VLRE+ ++++A +W KLE +Y+ K
Sbjct: 160 ALKGKEHLPSNLSDGEKDDLMKKAHSVILLALSDEVLREVTDEESAAAVWFKLESIYMTK 219
Query: 189 SLSNKIYLKEQLFGFKMS 242
SL+N++Y+K++L+ KMS
Sbjct: 220 SLTNRLYMKQRLYTLKMS 237
>emb|CAN69096.1| hypothetical protein VITISV_025437 [Vitis vinifera]
Length = 992
Score = 62.4 bits (150), Expect = 6e-08
Identities = 30/78 (38%), Positives = 51/78 (65%)
Frame = +3
Query: 9 AICSPEKYPESWKGEILSEKLGDAHSCLTLHLTDNVLREIDEKDNAFEIWTKLEKLYLGK 188
A+ + P + + + E L +AHS + L L+D VLRE+ + +A ++W KLE LY+ K
Sbjct: 423 ALLGEKNLPSTMQEKQKIELLEEAHSAIILSLSDTVLREVAKAKSATKLWLKLESLYMTK 482
Query: 189 SLSNKIYLKEQLFGFKMS 242
SL+N+++ K +L+ FKM+
Sbjct: 483 SLANRLHKKIKLYTFKMT 500
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 62.0 bits (149), Expect = 8e-08
Identities = 30/63 (47%), Positives = 45/63 (71%)
Frame = +3
Query: 54 ILSEKLGDAHSCLTLHLTDNVLREIDEKDNAFEIWTKLEKLYLGKSLSNKIYLKEQLFGF 233
IL EK AHS + L L D+V+ E+ +++ A +W KLE LY+ KSL+NK+ LK++LFG
Sbjct: 51 ILEEK---AHSTIMLCLADDVITEVSDEETAAGLWLKLESLYMTKSLTNKLLLKQRLFGL 107
Query: 234 KMS 242
+M+
Sbjct: 108 RMA 110
>emb|CAN60557.1| hypothetical protein VITISV_035871 [Vitis vinifera]
Length = 110
Score = 61.6 bits (148), Expect = 1e-07
Identities = 31/71 (43%), Positives = 46/71 (64%)
Frame = +3
Query: 21 PEKYPESWKGEILSEKLGDAHSCLTLHLTDNVLREIDEKDNAFEIWTKLEKLYLGKSLSN 200
P+ E K +IL + A S + L L D LRE+ ++ +A IW KLEKLY+ KSL+N
Sbjct: 44 PKTLSEKEKNDILEK----AQSAIILSLGDKALREVSKETSAAAIWLKLEKLYMTKSLAN 99
Query: 201 KIYLKEQLFGF 233
++YLK++L+ F
Sbjct: 100 RLYLKQRLYSF 110
>gb|EOY34202.1| Uncharacterized protein TCM_041944 [Theobroma cacao]
Length = 698
Score = 61.2 bits (147), Expect = 1e-07
Identities = 24/55 (43%), Positives = 42/55 (76%)
Frame = +3
Query: 78 AHSCLTLHLTDNVLREIDEKDNAFEIWTKLEKLYLGKSLSNKIYLKEQLFGFKMS 242
AHS + L L+D V+RE+ ++++A +W KL+ +Y+ KSL N++Y+K++L+ KMS
Sbjct: 61 AHSAILLALSDEVIREVTDEESAIAVWLKLKSIYMTKSLMNRLYIKQRLYTLKMS 115
>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
Length = 1342
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/74 (41%), Positives = 49/74 (66%)
Frame = +3
Query: 21 PEKYPESWKGEILSEKLGDAHSCLTLHLTDNVLREIDEKDNAFEIWTKLEKLYLGKSLSN 200
PE + +IL EK G A S + L L +NVLR++ ++ A + L++L++ KSL N
Sbjct: 60 PETATSKLEDKILKEKRGKARSTIILSLGNNVLRKVIKQKTAAGMIKVLDQLFMAKSLPN 119
Query: 201 KIYLKEQLFGFKMS 242
+IYLK++L+G+KMS
Sbjct: 120 RIYLKQRLYGYKMS 133
>ref|XP_003612373.1| Glutamate receptor 3.6 [Medicago truncatula]
gi|355513708|gb|AES95331.1| Glutamate receptor 3.6
[Medicago truncatula]
Length = 449
Score = 61.2 bits (147), Expect = 1e-07
Identities = 29/69 (42%), Positives = 46/69 (66%)
Frame = +3
Query: 33 PESWKGEILSEKLGDAHSCLTLHLTDNVLREIDEKDNAFEIWTKLEKLYLGKSLSNKIYL 212
P++ E +E + A S + L L D VLR++ ++ A IW+KLE LY+ KSL+++ +L
Sbjct: 43 PDTMSQEEKTEMMDKARSAIVLCLGDKVLRDVAKEPTAASIWSKLESLYMTKSLAHRQFL 102
Query: 213 KEQLFGFKM 239
K+QL+ FKM
Sbjct: 103 KQQLYSFKM 111
>emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
Length = 939
Score = 60.8 bits (146), Expect = 2e-07
Identities = 28/54 (51%), Positives = 38/54 (70%)
Frame = +3
Query: 78 AHSCLTLHLTDNVLREIDEKDNAFEIWTKLEKLYLGKSLSNKIYLKEQLFGFKM 239
A+ + L L D LRE E+ A +W KLE+LY+ SLSN++YLKE+L+GFKM
Sbjct: 59 AYHLIILALGDKALREFSEETTAKGVWNKLEQLYMQNSLSNRLYLKERLYGFKM 112
>gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 60.8 bits (146), Expect = 2e-07
Identities = 31/73 (42%), Positives = 48/73 (65%)
Frame = +3
Query: 24 EKYPESWKGEILSEKLGDAHSCLTLHLTDNVLREIDEKDNAFEIWTKLEKLYLGKSLSNK 203
E+ E + E+L EK A S + L +TD VLR+I ++ +A + L+KLY+ K+L N+
Sbjct: 56 EEKEEVLRRELLEEKRRKARSAIVLSVTDRVLRKIKKEQSAAAMLGVLDKLYMSKALPNR 115
Query: 204 IYLKEQLFGFKMS 242
IY K++L+ FKMS
Sbjct: 116 IYQKQKLYSFKMS 128
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 60.5 bits (145), Expect = 2e-07
Identities = 31/78 (39%), Positives = 48/78 (61%)
Frame = +3
Query: 9 AICSPEKYPESWKGEILSEKLGDAHSCLTLHLTDNVLREIDEKDNAFEIWTKLEKLYLGK 188
A+ + P + + + E L AHS + L L D VLRE + +A E+W KLE LY+ K
Sbjct: 36 ALLGEKNLPSTMQEKQKIELLEKAHSAIILSLGDTVLREXAKAKSAAEVWLKLESLYMTK 95
Query: 189 SLSNKIYLKEQLFGFKMS 242
SL+N+++ K +L+ FKM+
Sbjct: 96 SLANRLHKKIKLYTFKMT 113
>gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 60.5 bits (145), Expect = 2e-07
Identities = 34/76 (44%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Frame = +3
Query: 18 SPEKYPESW-KGEILSEKLGDAHSCLTLHLTDNVLREIDEKDNAFEIWTKLEKLYLGKSL 194
S E Y E K E L EK A S + L +TD VLR+I ++ A + L+KLY+ K+L
Sbjct: 53 SDEDYEEKLEKFEALEEKKKKARSAIVLSVTDRVLRKIKKESTAAAMLLALDKLYMSKAL 112
Query: 195 SNKIYLKEQLFGFKMS 242
N+IY K++L+ FKMS
Sbjct: 113 PNRIYPKQKLYSFKMS 128
>emb|CAJ76058.1| gag protein [Cucumis melo]
Length = 122
Score = 60.1 bits (144), Expect = 3e-07
Identities = 33/63 (52%), Positives = 42/63 (66%)
Frame = +3
Query: 60 SEKLGDAHSCLTLHLTDNVLREIDEKDNAFEIWTKLEKLYLGKSLSNKIYLKEQLFGFKM 239
+E G+A + + L L DNVL I+EK A EIW L KLY KSL NKI+LK +L+ +M
Sbjct: 25 NEMDGNAMANIHLALVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKRKLYTLRM 84
Query: 240 SGS 248
SGS
Sbjct: 85 SGS 87
>ref|XP_004165166.1| PREDICTED: uncharacterized protein LOC101225243 [Cucumis sativus]
Length = 158
Score = 59.3 bits (142), Expect = 5e-07
Identities = 25/57 (43%), Positives = 41/57 (71%)
Frame = +3
Query: 78 AHSCLTLHLTDNVLREIDEKDNAFEIWTKLEKLYLGKSLSNKIYLKEQLFGFKMSGS 248
A+ L L+++DN++R++ E++ A ++W KLE LY K L NKI L+E++F +KM S
Sbjct: 59 AYGTLILNISDNIIRQVLEEETAHKVWKKLESLYATKDLPNKICLREKIFTYKMDSS 115
>emb|CAN72864.1| hypothetical protein VITISV_029730 [Vitis vinifera]
Length = 319
Score = 59.3 bits (142), Expect = 5e-07
Identities = 28/75 (37%), Positives = 48/75 (64%)
Frame = +3
Query: 24 EKYPESWKGEILSEKLGDAHSCLTLHLTDNVLREIDEKDNAFEIWTKLEKLYLGKSLSNK 203
E P + + + ++ L AH+ + L L D +LRE+ + + E+W KLE LY+ KSL+N+
Sbjct: 22 ENLPNTMQEKEKAKLLEKAHNAIILSLGDTMLREVAKAKSTVELWLKLESLYMTKSLANQ 81
Query: 204 IYLKEQLFGFKMSGS 248
++ K +L+ FKM+ S
Sbjct: 82 LHKKVKLYTFKMTSS 96
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 59.3 bits (142), Expect = 5e-07
Identities = 33/80 (41%), Positives = 43/80 (53%)
Frame = +3
Query: 3 APAICSPEKYPESWKGEILSEKLGDAHSCLTLHLTDNVLREIDEKDNAFEIWTKLEKLYL 182
A AI EK P E + AHS + L L D VLRE+ ++ A +W KLE Y
Sbjct: 441 AQAIEGEEKLPVGLTAAEKEEVVSRAHSAILLSLADEVLREVADETTAVGLWRKLESKYQ 500
Query: 183 GKSLSNKIYLKEQLFGFKMS 242
KSL+N++Y K +L KMS
Sbjct: 501 KKSLTNRLYQKRRLHTLKMS 520
>ref|XP_006397138.1| hypothetical protein EUTSA_v10029300mg [Eutrema salsugineum]
gi|557098155|gb|ESQ38591.1| hypothetical protein
EUTSA_v10029300mg [Eutrema salsugineum]
Length = 120
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/72 (37%), Positives = 46/72 (63%)
Frame = +3
Query: 24 EKYPESWKGEILSEKLGDAHSCLTLHLTDNVLREIDEKDNAFEIWTKLEKLYLGKSLSNK 203
+K P+ K + ++ A S + L L+D++ ++ E+W KLEK+Y+ KSLS+K
Sbjct: 7 KKKPDKLKKDDWADMQDQAVSTIQLCLSDDITNQVMNITTCMEMWDKLEKMYMSKSLSSK 66
Query: 204 IYLKEQLFGFKM 239
+YLK++L+G KM
Sbjct: 67 LYLKQKLYGLKM 78