BLASTX nr result

ID: Catharanthus22_contig00010529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00010529
         (2320 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01933.1| hypothetical protein [Beta vulgaris]                    59   6e-06

>gb|ACY01933.1| hypothetical protein [Beta vulgaris]
          Length = 476

 Score = 58.5 bits (140), Expect(2) = 6e-06
 Identities = 43/131 (32%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
 Frame = +1

Query: 1099 IVFRDGEQRDNFETLHLKNFSPTNNLDEKSLKSLGIYEDVKYLFDNIGWFDFLTFVPPTV 1278
            ++F   EQR+ F+ L  +  SPT  LD + L  LGI+ + K     IG   F T    T 
Sbjct: 30   VIFSTEEQRERFQRLKGREVSPTTFLDIEFLDKLGIHNEFKEFMKIIGMEPFYTVHVNTY 89

Query: 1279 RRLTLEFFSSAGTKMLTHEEDVIEEFLMFRLLNRDYQLSFNEINEIFGFPTDSHLG--PD 1452
              L  EF+SS     +TH        + +RLLNRD+ L+  E   I        +G  PD
Sbjct: 90   PVLVYEFYSSLN---VTHPRSGPISHVSYRLLNRDFTLTLPEFARILRVLNRGEIGHPPD 146

Query: 1453 DKYCQEYDAIS 1485
              +   Y AI+
Sbjct: 147  YHHRNVYYAIT 157



 Score = 20.8 bits (42), Expect(2) = 6e-06
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +3

Query: 1536 ASLICNPCFKYAHRLMSLALFYHNDTNVSKGD 1631
            A  I  P FK   R MS  LF   +  + +GD
Sbjct: 170  ARYIHQPIFKIWVRFMSKTLFGRVEGQLIRGD 201


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