BLASTX nr result
ID: Catharanthus22_contig00010411
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00010411
(3947 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV a... 1882 0.0
ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D sub... 1880 0.0
ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV a... 1836 0.0
ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D sub... 1831 0.0
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub... 1799 0.0
emb|CBI21137.3| unnamed protein product [Vitis vinifera] 1780 0.0
gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum... 1726 0.0
gb|EPS73521.1| hypothetical protein M569_01229, partial [Genlise... 1706 0.0
gb|EOY29336.1| DNA-directed RNA polymerase isoform 1 [Theobroma ... 1700 0.0
gb|EMJ26641.1| hypothetical protein PRUPE_ppa000410mg [Prunus pe... 1697 0.0
ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citr... 1694 0.0
ref|XP_002324332.2| DNA-directed RNA polymerase family protein [... 1664 0.0
ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ... 1659 0.0
ref|XP_004501385.1| PREDICTED: DNA-directed RNA polymerase D sub... 1649 0.0
ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D sub... 1646 0.0
ref|XP_003523670.1| PREDICTED: DNA-directed RNA polymerases IV a... 1642 0.0
ref|XP_003527775.1| PREDICTED: DNA-directed RNA polymerases IV a... 1639 0.0
ref|XP_004288915.1| PREDICTED: DNA-directed RNA polymerase D sub... 1633 0.0
gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhodode... 1620 0.0
gb|EXB86677.1| DNA-directed RNA polymerase D subunit 2a [Morus n... 1620 0.0
>ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Solanum tuberosum]
Length = 1217
Score = 1882 bits (4874), Expect = 0.0
Identities = 898/1160 (77%), Positives = 1020/1160 (87%), Gaps = 1/1160 (0%)
Frame = +1
Query: 286 ELGEDFLKKFCKKTAVAFFEQYGLISHQINSFNDFIKYGLQKVFDSVGEIIIEPGYDPSK 465
ELGE +LK FCKK + FFE+YGLISHQINS+NDFI YG+Q+VFDSVGEI +EPGYDPSK
Sbjct: 60 ELGETYLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSK 119
Query: 466 RGDGDWRYASLKFGKVHVERPKIWSGDKFTTDGGVEFMNMLPRHARLQNMTYAGRMLVET 645
RGDGDW++AS+KFGKV +ERPK W+G+KF+ DGG E++++LPRHARLQNMTY+ R++VET
Sbjct: 120 RGDGDWKHASVKFGKVTLERPKFWAGEKFSADGGKEYLDLLPRHARLQNMTYSARIMVET 179
Query: 646 HVQIYTKKLVRSDKFKTGMEQYVNKELEKEDTRSIIIGRLPVMVKSELCWTSESEKRDCD 825
HVQ+YTKKLVRSDKFKTG++Q+V+KE E ED R ++IGR+PVMV SELCW + +K DC+
Sbjct: 180 HVQVYTKKLVRSDKFKTGVDQFVDKECEVEDKRDVLIGRIPVMVNSELCWMNGVDKLDCE 239
Query: 826 FDHGGYFIVKGAEKTFIAQEQICLRRLWLSSSPTWMVAYRPAEKRKRVYLKLVDTPRFEN 1005
FDHGGYFIVKGAEKTFIAQEQ+CL+RLW+S++PTWMV YRP EKRKRVY+KL +T + E+
Sbjct: 240 FDHGGYFIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYIKLTETLKLEH 299
Query: 1006 LGGGEKTLSVYFVVTEMPVWILFFALGASSDKEVVNLIDLDIEDTKIVNTLVASIYDADK 1185
+ GGEK LSVY ++ EMP+W+LFFALG SSD+EVVNLID+DIEDT IVN LVASI++ADK
Sbjct: 300 IKGGEKALSVY-ILAEMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIHEADK 358
Query: 1186 NCDGFRKGKNALNHIEKLLKNCKFPPTESVEECIQNFLFPNLKGFKQKARFLGYMVKCLL 1365
NC+ FRKGK AL ++++L+KNCKFPP ESVEECI +LFPNL GFKQKARFLGYMVKCLL
Sbjct: 359 NCEDFRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMVKCLL 418
Query: 1366 EAYTGRRKMDNRDDFRNKXXXXXXXXXXXXXKVHLKHAERRMIKAMQRDLYGDRDLQQIE 1545
++ GRRK+DNRDDFRNK + H+KHAERRM+KAMQRDLYGDR +Q IE
Sbjct: 419 HSFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIE 478
Query: 1546 NYLDASIVTNGLSRAFSTGAWCHPYKRMERVSGVVATLRRTNPLQMTADMRKTRQQVSYT 1725
+YLDASI+TNGLSRAFSTG WCHPYKRMERVSGVVATLRRTNPLQMTADMRK+RQQV+YT
Sbjct: 479 HYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQVTYT 538
Query: 1726 GRVGDARYPHPSHWGKICFLSTPDGENCGLVKNLASLGLVSTTNLEPLLDKLYDCGMNEL 1905
G+VGDARYPHPSHWGK+CFLSTPDGENCGLVKNLAS+GLVST L+P L+ L+ CGM +L
Sbjct: 539 GKVGDARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTIILKPFLETLFRCGMQKL 598
Query: 1906 VDDTSSVLLGEHKIFLDGDWVGMCQDSESFVEQLRNMRRSNEVPHQVEIKMDREHREIRI 2085
VDD ++ L G+ K+ LDG+WVG+C+DS FV +LR RR NEVPHQVE+K D E+RI
Sbjct: 599 VDDCATSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDELQGEVRI 658
Query: 2086 FSDAGRILRPLLVVENLKKIKALKGGDLSFQFLLDRXXXXXXXXXXXXDCVTAWGIGYLL 2265
FSD+GRILRPLLVV NLKKIKALKGGD FQ LLD DC TAWG+ Y+L
Sbjct: 659 FSDSGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIEFIGPEEEEDCRTAWGVEYIL 718
Query: 2266 NADKENPRRRYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPN 2445
ADKENP +YTHCELDMSFLLGLSCGIIP+ANHDHARRVLYQSEKHSQQAIGFST NPN
Sbjct: 719 KADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPN 778
Query: 2446 IRIDTNIHQLYYPQRPLFRTVLSECLGKSTYTR-QKGMLPRPEYYNGQCAIVAVNVHLGY 2622
R+DTN HQLYYPQRPLFRT+L++ LGK T+ QKGMLPRPEY+NGQCAIVAVNVHLGY
Sbjct: 779 NRVDTNTHQLYYPQRPLFRTMLADSLGKPKCTQYQKGMLPRPEYFNGQCAIVAVNVHLGY 838
Query: 2623 NQEDSLVMNRASLERGMFRSEHIRSYKAEVDSTEASGKKSKPEDSITFGKLQSKIGRVDS 2802
NQEDSLVMNRASLERGMFRSEH+RSYKAEVD+ EA KK K EDS+ FGK QSKIGRVDS
Sbjct: 839 NQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAMAKKLKIEDSVNFGKTQSKIGRVDS 898
Query: 2803 LDDDGFPYIGANLQTGDIVIGKYTESGTDHSVKLKHTERGMVQKVIRSANDEGKNFAVVS 2982
LDDDGFP+IGANLQ+GDI+IGK+ ESG DHSVKLKHTERGMVQKV+ SANDEGKNFAVVS
Sbjct: 899 LDDDGFPFIGANLQSGDIIIGKFAESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVS 958
Query: 2983 LRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTREGIVPDIVINPHAFPSRQTPAQLL 3162
LRQVR+PCLGDKFSSMHGQKGVLGFLESQENFPFT +GIVPDIVINPHAFPSRQTP QLL
Sbjct: 959 LRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLL 1018
Query: 3163 EAALGKGIAAGGVLKYATPFAALSVEAITQQLKSCGFSRWGNERVYNGRTGEMIHSLVFM 3342
EAALGKGIA GG KYATPF+ LSV+AI +QL+ GF+RWGNERVYNGRTGEM+HSL+FM
Sbjct: 1019 EAALGKGIALGGGQKYATPFSTLSVDAIMEQLQGRGFTRWGNERVYNGRTGEMVHSLIFM 1078
Query: 3343 GPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANL 3522
GPTFYQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANL
Sbjct: 1079 GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANL 1138
Query: 3523 HERLFTLSDCSQIHICRKCKSMANVIQRSVLGGRKIRGPYCRICESTEDIVRASVPYGAK 3702
HERLFTLSD SQ+HIC KCK+MANVIQR+V GG K+RGP+CR CES EDIV+ +VPYGAK
Sbjct: 1139 HERLFTLSDSSQMHICGKCKNMANVIQRTVQGG-KVRGPFCRFCESVEDIVKVNVPYGAK 1197
Query: 3703 LLAQELFSMNISLKFETEVC 3762
LL QELFSM ISLKF+TE+C
Sbjct: 1198 LLCQELFSMGISLKFDTEIC 1217
>ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a [Solanum
lycopersicum]
Length = 1217
Score = 1880 bits (4870), Expect = 0.0
Identities = 898/1160 (77%), Positives = 1019/1160 (87%), Gaps = 1/1160 (0%)
Frame = +1
Query: 286 ELGEDFLKKFCKKTAVAFFEQYGLISHQINSFNDFIKYGLQKVFDSVGEIIIEPGYDPSK 465
ELGE FLK FCKK + FFE+YGLISHQINS+NDFI YG+Q+VFDSVGEI +EPGYDPSK
Sbjct: 60 ELGESFLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSK 119
Query: 466 RGDGDWRYASLKFGKVHVERPKIWSGDKFTTDGGVEFMNMLPRHARLQNMTYAGRMLVET 645
RGDGDW++AS+KFGKV +ERPK W+G+KF+ DGG E++++LPRHARLQNMTY+ R++VET
Sbjct: 120 RGDGDWKHASVKFGKVTLERPKFWAGEKFSVDGGKEYLDLLPRHARLQNMTYSARIMVET 179
Query: 646 HVQIYTKKLVRSDKFKTGMEQYVNKELEKEDTRSIIIGRLPVMVKSELCWTSESEKRDCD 825
HVQ+YTKKLVRSDKFKTG++++V+KE E ED R ++IGR+PVMV SELCW + +K DC+
Sbjct: 180 HVQVYTKKLVRSDKFKTGVDRFVDKEWEVEDKRDVLIGRIPVMVNSELCWMNGVDKLDCE 239
Query: 826 FDHGGYFIVKGAEKTFIAQEQICLRRLWLSSSPTWMVAYRPAEKRKRVYLKLVDTPRFEN 1005
FDHGGYFIVKGAEKTFIAQEQ+CL+RLW+S++PTWMV YRP EKRKRVY+KL +T + E+
Sbjct: 240 FDHGGYFIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYIKLTETLKLEH 299
Query: 1006 LGGGEKTLSVYFVVTEMPVWILFFALGASSDKEVVNLIDLDIEDTKIVNTLVASIYDADK 1185
+ GGEK LSVY ++ EMP+W+LFFALG SSD+EVVNLID+DIEDT IVN LVASI++ADK
Sbjct: 300 IKGGEKALSVY-ILAEMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIHEADK 358
Query: 1186 NCDGFRKGKNALNHIEKLLKNCKFPPTESVEECIQNFLFPNLKGFKQKARFLGYMVKCLL 1365
NC+ FRKGK AL ++++L+KNCKFPP ESVEECI +LFPNL GFKQKARFLGYMVKCLL
Sbjct: 359 NCEDFRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMVKCLL 418
Query: 1366 EAYTGRRKMDNRDDFRNKXXXXXXXXXXXXXKVHLKHAERRMIKAMQRDLYGDRDLQQIE 1545
++ GRRK+DNRDDFRNK + H+KHAERRM+KAMQRDLYGDR +Q IE
Sbjct: 419 HSFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIE 478
Query: 1546 NYLDASIVTNGLSRAFSTGAWCHPYKRMERVSGVVATLRRTNPLQMTADMRKTRQQVSYT 1725
+YLDASI+TNGLSRAFSTG WCHPYKRMERVSGVVATLRRTNPLQMTADMRK+RQQV+YT
Sbjct: 479 HYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQVTYT 538
Query: 1726 GRVGDARYPHPSHWGKICFLSTPDGENCGLVKNLASLGLVSTTNLEPLLDKLYDCGMNEL 1905
G+VGDARYPHPSHWGK+CFLSTPDGENCGLVKNLAS+GLVST L+P L+ L+ CGM +L
Sbjct: 539 GKVGDARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTIILKPFLETLFRCGMQKL 598
Query: 1906 VDDTSSVLLGEHKIFLDGDWVGMCQDSESFVEQLRNMRRSNEVPHQVEIKMDREHREIRI 2085
VDD S+ L G+ K+ LDG+WVG+C+DS FV +LR RR NEVPHQVE+K D E+RI
Sbjct: 599 VDDCSTSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDELQGEVRI 658
Query: 2086 FSDAGRILRPLLVVENLKKIKALKGGDLSFQFLLDRXXXXXXXXXXXXDCVTAWGIGYLL 2265
FSD GRILRPLLVV NLKKIKALKGGD FQ LLD DC TAWG+ Y+L
Sbjct: 659 FSDPGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGVEYIL 718
Query: 2266 NADKENPRRRYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPN 2445
ADKENP +YTHCELDMSFLLGLSCGIIP+ANHDHARRVLYQSEKHSQQAIGFST NPN
Sbjct: 719 KADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPN 778
Query: 2446 IRIDTNIHQLYYPQRPLFRTVLSECLGKSTYTR-QKGMLPRPEYYNGQCAIVAVNVHLGY 2622
R+DTN HQLYYPQRPLFRT+L++ LGK + QKGMLPRPEY+NGQCAIVAVNVHLGY
Sbjct: 779 NRVDTNTHQLYYPQRPLFRTMLADSLGKPKCAQYQKGMLPRPEYFNGQCAIVAVNVHLGY 838
Query: 2623 NQEDSLVMNRASLERGMFRSEHIRSYKAEVDSTEASGKKSKPEDSITFGKLQSKIGRVDS 2802
NQEDSLVMNRASLERGMFRSEH+RSYKAEVD+ EA KK K EDS+ FGK QSKIGRVDS
Sbjct: 839 NQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAMAKKLKIEDSVNFGKTQSKIGRVDS 898
Query: 2803 LDDDGFPYIGANLQTGDIVIGKYTESGTDHSVKLKHTERGMVQKVIRSANDEGKNFAVVS 2982
LDDDGFP+IGANLQ+GDI+IGK++ESG DHSVKLKHTERGMVQKV+ SANDEGKNFAVVS
Sbjct: 899 LDDDGFPFIGANLQSGDIIIGKFSESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVS 958
Query: 2983 LRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTREGIVPDIVINPHAFPSRQTPAQLL 3162
LRQVR+PCLGDKFSSMHGQKGVLGFLESQENFPFT +GIVPDIVINPHAFPSRQTP QLL
Sbjct: 959 LRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLL 1018
Query: 3163 EAALGKGIAAGGVLKYATPFAALSVEAITQQLKSCGFSRWGNERVYNGRTGEMIHSLVFM 3342
EAALGKGIA GG KYATPF+ LSV+AI +QL+ GF+RWGNERVYNGRTGEM+HSL+FM
Sbjct: 1019 EAALGKGIALGGGQKYATPFSTLSVDAIMEQLQGRGFTRWGNERVYNGRTGEMVHSLIFM 1078
Query: 3343 GPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANL 3522
GPTFYQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANL
Sbjct: 1079 GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANL 1138
Query: 3523 HERLFTLSDCSQIHICRKCKSMANVIQRSVLGGRKIRGPYCRICESTEDIVRASVPYGAK 3702
HERLFTLSD SQ+HIC KCK+MANVIQR+V GG K+RGP+CR CES EDIV+ +VPYGAK
Sbjct: 1139 HERLFTLSDSSQMHICGKCKNMANVIQRTVQGG-KVRGPFCRFCESVEDIVKVNVPYGAK 1197
Query: 3703 LLAQELFSMNISLKFETEVC 3762
LL QELFSM ISLKF+TE+C
Sbjct: 1198 LLCQELFSMGISLKFDTEIC 1217
>ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Solanum tuberosum]
Length = 1219
Score = 1836 bits (4756), Expect = 0.0
Identities = 881/1164 (75%), Positives = 1009/1164 (86%), Gaps = 5/1164 (0%)
Frame = +1
Query: 286 ELGEDFLKKFCKKTAVAFFEQYGLISHQINSFNDFIKYGLQKVFDSVGEIIIEPGYDPSK 465
ELG FL+ FCKK + FFE+YG+ISHQI+S+NDFI+YG+Q+VFDSVGEI +EPGYDPSK
Sbjct: 58 ELGGGFLRNFCKKASAGFFEKYGVISHQIDSYNDFIRYGIQRVFDSVGEIHVEPGYDPSK 117
Query: 466 RGDGDWRYASLKFGKVHVERPKIWSGDKFTTDGGVEFMNMLPRHARLQNMTYAGRMLVET 645
+G+G+W++AS+KFGKV ++RPK W+G+KF+ G E++++ PRHARLQNMTY+ R++VET
Sbjct: 118 KGEGEWKHASVKFGKVTLDRPKFWAGEKFSAYNGEEYLDLWPRHARLQNMTYSARIIVET 177
Query: 646 HVQIYTKKLVRSDKFKTGMEQYVNKELEKEDTRSIIIGRLPVMVKSELCWTSESEKRDCD 825
HVQ++TKKLVRSDKFKTG+EQ+V+KE ED R + IGR+PVMV SELCW S +++ DCD
Sbjct: 178 HVQVFTKKLVRSDKFKTGVEQFVDKECVMEDKRDVFIGRIPVMVNSELCWMSGADRPDCD 237
Query: 826 FDHGGYFIVKGAEKTFIAQEQICLRRLWLSSSPTWMVAYRPAEKRKRVYLKLVDTPRFEN 1005
FDHGGYFIVKGAEK FIAQEQICL+RLW+S+ TWMVAYR EKR RVYLKL +T + E+
Sbjct: 238 FDHGGYFIVKGAEKIFIAQEQICLKRLWVSNHSTWMVAYRSGEKRNRVYLKLTETLKHEH 297
Query: 1006 LGGGEKTLSVYFVVTEMPVWILFFALGASSDKEVVNLIDLDIEDTKIVNTLVASIYDADK 1185
+ G K LSVYF+ EMP+W+LFFALG SSD+E+V+LID+DI+DT I+N LVASI+DADK
Sbjct: 298 IKGEAKALSVYFLA-EMPIWVLFFALGVSSDREIVDLIDVDIKDTNIINILVASIHDADK 356
Query: 1186 NCDGFRKGKNALNHIEKLLKNCKFPPTESVEECIQNFLFPNLKGFKQKARFLGYMVKCLL 1365
NC+ FRKGK AL ++++L+K+CKFPP ESVEECI+ +LFPNL G KQKARFLGYMVKCLL
Sbjct: 357 NCEDFRKGKKALAYVDRLIKSCKFPPQESVEECIKEYLFPNLSGLKQKARFLGYMVKCLL 416
Query: 1366 EAYTGRRKMDNRDDFRNKXXXXXXXXXXXXXKVHLKHAERRMIKAMQRDLYGDRDLQQIE 1545
+Y GRRK+DNRDDFRNK + H+KHAERRM+KA+QRDL GDR +Q +E
Sbjct: 417 LSYIGRRKVDNRDDFRNKRLDLAGELLERELRAHIKHAERRMVKALQRDLCGDRQVQPLE 476
Query: 1546 NYLDASIVTNGLSRAFSTGAWCHPYKRMERVSGVVATLRRTNPLQMTADMRKTRQQVSYT 1725
+YLDASI+TNGLSRAFSTG WCHPYKRMERVSGVVATLRRTNPLQMTAD+RKTRQQV+YT
Sbjct: 477 HYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADLRKTRQQVTYT 536
Query: 1726 GRVGDARYPHPSHWGKICFLSTPDGENCGLVKNLASLGLVSTTNLEPLLDKLYDCGMNEL 1905
G+VGDARYPHPSHWGK+CFLSTPDGENCGLVKNLAS+GLVSTT L+PLL+ L+ CGM +L
Sbjct: 537 GKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTVLKPLLETLFRCGMQKL 596
Query: 1906 VDDTSSVLLGEHKIFLDGDWVGMCQDSESFVEQLRNMRRSNEVPHQVEIKMDREHREIRI 2085
VDD+++ L G+ K+ LDGDWVG+C+DS FV +LR RR NEVPHQVE+K D + E+RI
Sbjct: 597 VDDSATSLHGKQKVLLDGDWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDEQQDEVRI 656
Query: 2086 FSDAGRILRPLLVVENLKKIKALK----GGDLSFQFLLDRXXXXXXXXXXXXDCVTAWGI 2253
FSDAGRI+RPLLVV NLK IK+LK GGD FQ LLD+ DC TAWG+
Sbjct: 657 FSDAGRIMRPLLVVSNLKNIKSLKDGMKGGDYGFQTLLDKGIIELIGPEEEEDCRTAWGV 716
Query: 2254 GYLLNADKENPRRRYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFST 2433
YLL ADKENP YTHCELDMSFLLGLSCG+IP+ANHDHARRVLYQSEKHSQQAIGFST
Sbjct: 717 EYLLKADKENPPVNYTHCELDMSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGFST 776
Query: 2434 TNPNIRIDTNIHQLYYPQRPLFRTVLSECLGKSTYTR-QKGMLPRPEYYNGQCAIVAVNV 2610
NPN R+DTN HQLYYPQRPLF T+LS+ LGK R QKGML RPEYYNGQCAIVAVNV
Sbjct: 777 VNPNARVDTNTHQLYYPQRPLFGTMLSDSLGKPKCGRHQKGMLSRPEYYNGQCAIVAVNV 836
Query: 2611 HLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDSTEASGKKSKPEDSITFGKLQSKIG 2790
HLGYNQEDS+VMNRASLERGMFRSEH+RSYKAEVD+ EA GKKSK EDS+ FGK QSKIG
Sbjct: 837 HLGYNQEDSVVMNRASLERGMFRSEHVRSYKAEVDNKEAMGKKSKVEDSVNFGKTQSKIG 896
Query: 2791 RVDSLDDDGFPYIGANLQTGDIVIGKYTESGTDHSVKLKHTERGMVQKVIRSANDEGKNF 2970
RVDSLDDDGFP+IGANLQ+GDI+IGKY ESG DHSVK+KHTERGMVQKV+ SAND+GKNF
Sbjct: 897 RVDSLDDDGFPFIGANLQSGDIIIGKYAESGADHSVKMKHTERGMVQKVLLSANDDGKNF 956
Query: 2971 AVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTREGIVPDIVINPHAFPSRQTP 3150
AVVSLRQVR+PCLGDKFSSMHGQKGVLG+LESQENFPFT +GIVPDIVINPHAFPSRQTP
Sbjct: 957 AVVSLRQVRSPCLGDKFSSMHGQKGVLGYLESQENFPFTVQGIVPDIVINPHAFPSRQTP 1016
Query: 3151 AQLLEAALGKGIAAGGVLKYATPFAALSVEAITQQLKSCGFSRWGNERVYNGRTGEMIHS 3330
QLLEAALGKGIA GG KYATPF+ALSV+AI +QL GFSRWG+ERVYNGRTGEM+HS
Sbjct: 1017 GQLLEAALGKGIALGGGEKYATPFSALSVDAILKQLHGRGFSRWGSERVYNGRTGEMVHS 1076
Query: 3331 LVFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA 3510
L+FMGPTFYQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA
Sbjct: 1077 LIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA 1136
Query: 3511 AANLHERLFTLSDCSQIHICRKCKSMANVIQRSVLGGRKIRGPYCRICESTEDIVRASVP 3690
AANLHERLFTLSD SQ+HIC KCK+MANVIQRS GG KIRGP+CR CES EDIV+ VP
Sbjct: 1137 AANLHERLFTLSDSSQMHICGKCKNMANVIQRSAPGG-KIRGPFCRFCESVEDIVKVDVP 1195
Query: 3691 YGAKLLAQELFSMNISLKFETEVC 3762
YGAKLL QELFSM ISLKF+TE+C
Sbjct: 1196 YGAKLLCQELFSMGISLKFDTEIC 1219
>ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Solanum
lycopersicum]
Length = 1219
Score = 1832 bits (4744), Expect = 0.0
Identities = 881/1164 (75%), Positives = 1006/1164 (86%), Gaps = 5/1164 (0%)
Frame = +1
Query: 286 ELGEDFLKKFCKKTAVAFFEQYGLISHQINSFNDFIKYGLQKVFDSVGEIIIEPGYDPSK 465
ELG FL+ FCKK + FFE+YGLISHQI+S+NDFI+YG+QKVFDSVGEI +EPGYDPSK
Sbjct: 58 ELGGGFLRNFCKKASAGFFEKYGLISHQIDSYNDFIRYGIQKVFDSVGEIHVEPGYDPSK 117
Query: 466 RGDGDWRYASLKFGKVHVERPKIWSGDKFTTDGGVEFMNMLPRHARLQNMTYAGRMLVET 645
+G+G+W++AS+KFG V ++RPK W+G+K++ G E++NM PRHARLQNMTY+ R++VET
Sbjct: 118 KGEGEWKHASVKFGNVILDRPKFWAGEKYSAYNGEEYLNMWPRHARLQNMTYSARIIVET 177
Query: 646 HVQIYTKKLVRSDKFKTGMEQYVNKELEKEDTRSIIIGRLPVMVKSELCWTSESEKRDCD 825
HVQ++TKKLVRSDKFKTG+EQ+V+KE ED R + IGR+PVMV SELCW S +++ DC+
Sbjct: 178 HVQVFTKKLVRSDKFKTGVEQFVDKECVMEDKRDVFIGRIPVMVNSELCWMSGADRLDCE 237
Query: 826 FDHGGYFIVKGAEKTFIAQEQICLRRLWLSSSPTWMVAYRPAEKRKRVYLKLVDTPRFEN 1005
FDHGGYFIVKGAEK FIAQEQ+CL+RLW+S+ TWMVAYR EKR RVYLKL +T + E
Sbjct: 238 FDHGGYFIVKGAEKIFIAQEQMCLKRLWVSNHYTWMVAYRSGEKRNRVYLKLTETLKHEQ 297
Query: 1006 LGGGEKTLSVYFVVTEMPVWILFFALGASSDKEVVNLIDLDIEDTKIVNTLVASIYDADK 1185
+ G K+LSVYF+ EMP+W+LFFALG SSD+EVV+LID+DI+D KI+N LVASI+DADK
Sbjct: 298 IKGEAKSLSVYFLA-EMPIWVLFFALGVSSDREVVDLIDVDIKDNKIINILVASIHDADK 356
Query: 1186 NCDGFRKGKNALNHIEKLLKNCKFPPTESVEECIQNFLFPNLKGFKQKARFLGYMVKCLL 1365
NC+ FRKGK AL ++++L+K+CKFPP ESVEECI+ +LFPNL G KQKARFLGYMVKCLL
Sbjct: 357 NCEDFRKGKRALAYVDRLIKSCKFPPQESVEECIKEYLFPNLSGLKQKARFLGYMVKCLL 416
Query: 1366 EAYTGRRKMDNRDDFRNKXXXXXXXXXXXXXKVHLKHAERRMIKAMQRDLYGDRDLQQIE 1545
+Y GRRK+DNRDDFRNK +VH+KHAERRM+KA+QRDL GDR + IE
Sbjct: 417 LSYIGRRKVDNRDDFRNKRLDLAGELLERELRVHIKHAERRMVKALQRDLCGDRQVHPIE 476
Query: 1546 NYLDASIVTNGLSRAFSTGAWCHPYKRMERVSGVVATLRRTNPLQMTADMRKTRQQVSYT 1725
+YLDASI+TNGLSRAFSTG WCHPYKRMERVSGVVATLRRTNPLQMTAD+RKTRQQV+YT
Sbjct: 477 HYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADLRKTRQQVTYT 536
Query: 1726 GRVGDARYPHPSHWGKICFLSTPDGENCGLVKNLASLGLVSTTNLEPLLDKLYDCGMNEL 1905
G+VGDARYP+PSHWGK+CFLSTPDGENCGLVKNLAS+GLVSTT L PLL+ L+ CGM +L
Sbjct: 537 GKVGDARYPNPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTVLMPLLETLFRCGMQKL 596
Query: 1906 VDDTSSVLLGEHKIFLDGDWVGMCQDSESFVEQLRNMRRSNEVPHQVEIKMDREHREIRI 2085
VDD ++ L G+ K+ LDGDWVG+C+DS FV +LR RR NEVPHQVE+K D + E+RI
Sbjct: 597 VDDCATSLHGKQKVLLDGDWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDEQQDEVRI 656
Query: 2086 FSDAGRILRPLLVVENLKKIKAL----KGGDLSFQFLLDRXXXXXXXXXXXXDCVTAWGI 2253
FSDAGRI+RPLLVV NLK IKAL KGGD FQ LLD+ DC TAWG+
Sbjct: 657 FSDAGRIMRPLLVVSNLKNIKALNGGVKGGDYGFQTLLDKGIIELIGPEEEEDCRTAWGV 716
Query: 2254 GYLLNADKENPRRRYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFST 2433
YLL ADKENP YTHCELDMSFLLGLSCG+IP+ANHDHARRVLYQSEKHSQQAIGFST
Sbjct: 717 EYLLKADKENPPVNYTHCELDMSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGFST 776
Query: 2434 TNPNIRIDTNIHQLYYPQRPLFRTVLSECLGKSTYTR-QKGMLPRPEYYNGQCAIVAVNV 2610
NPNIR+DTN HQLYYPQRPLF T+LS+ LGK R Q+GML RPEYYNGQCAIVAVNV
Sbjct: 777 VNPNIRVDTNTHQLYYPQRPLFGTMLSDSLGKPKCARHQRGMLSRPEYYNGQCAIVAVNV 836
Query: 2611 HLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDSTEASGKKSKPEDSITFGKLQSKIG 2790
HLGYNQEDS+VMNRASLERGMFRSEH+RSYKAEVD+ EA+GKKSK EDS+ FGK QSKIG
Sbjct: 837 HLGYNQEDSVVMNRASLERGMFRSEHVRSYKAEVDNMEATGKKSKAEDSVNFGKTQSKIG 896
Query: 2791 RVDSLDDDGFPYIGANLQTGDIVIGKYTESGTDHSVKLKHTERGMVQKVIRSANDEGKNF 2970
RVD LDDDG PYIGANLQ+GDI+IGK+ ESG DHSVK+KHTE+GMVQKV+ SANDEGKNF
Sbjct: 897 RVDCLDDDGLPYIGANLQSGDIIIGKFAESGADHSVKMKHTEKGMVQKVLLSANDEGKNF 956
Query: 2971 AVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTREGIVPDIVINPHAFPSRQTP 3150
AVVSLRQVR+PCLGDKFSSMHGQKGVLG+LESQENFPFT +GIVPDIVINPHAFPSRQTP
Sbjct: 957 AVVSLRQVRSPCLGDKFSSMHGQKGVLGYLESQENFPFTVQGIVPDIVINPHAFPSRQTP 1016
Query: 3151 AQLLEAALGKGIAAGGVLKYATPFAALSVEAITQQLKSCGFSRWGNERVYNGRTGEMIHS 3330
QLLEAALGKGIA GG KYATPF+ALSV+AI +QL GFSRWGNERVYNGRTGEM+HS
Sbjct: 1017 GQLLEAALGKGIALGGGEKYATPFSALSVDAILKQLHGRGFSRWGNERVYNGRTGEMVHS 1076
Query: 3331 LVFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA 3510
L+FMGPTFYQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA
Sbjct: 1077 LIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA 1136
Query: 3511 AANLHERLFTLSDCSQIHICRKCKSMANVIQRSVLGGRKIRGPYCRICESTEDIVRASVP 3690
AANLHERLFTLSD SQ+HIC KCK+MANVIQR V GG K+RGP+CR CES EDIV+ VP
Sbjct: 1137 AANLHERLFTLSDSSQMHICGKCKNMANVIQRPVPGG-KVRGPFCRFCESVEDIVKVGVP 1195
Query: 3691 YGAKLLAQELFSMNISLKFETEVC 3762
YGAKLL QELFSM ISLKF+TE+C
Sbjct: 1196 YGAKLLCQELFSMGISLKFDTEIC 1219
>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
vinifera]
Length = 1198
Score = 1799 bits (4659), Expect = 0.0
Identities = 877/1212 (72%), Positives = 1018/1212 (83%), Gaps = 7/1212 (0%)
Frame = +1
Query: 148 VGMSGSRQERGVGSSE-DKASNGSLMXXXXXXXXXXXXXXXXXXPLGELGEDFLKKFCKK 324
+G S ++ + G+ SS +K SNG M + +L +++LK FCKK
Sbjct: 1 MGASDAKGDLGMSSSMGEKLSNGVQMEIDDDLMGSIE--------IDDLNKEYLKTFCKK 52
Query: 325 TAVAFFEQYGLISHQINSFNDFIKYGLQKVFDSVGEIIIEPGYDPSKRGDGDWRYASLKF 504
AV+FF +YGLI HQINSFNDFIK G+Q+VFDS GEI +EPGYDPSKRG+GDWRYAS++F
Sbjct: 53 VAVSFFNEYGLIQHQINSFNDFIKNGIQRVFDSFGEIPVEPGYDPSKRGEGDWRYASVRF 112
Query: 505 GKVHVERPKIWSGDKFTTDGGVEFMNMLPRHARLQNMTYAGRMLVETHVQIYTKKLVRSD 684
GKV +ERP++W+G+ G E +N LPRHARLQNMTY+ RM + H Q+YT+KLVRSD
Sbjct: 113 GKVTLERPRVWAGES----DGKESLNFLPRHARLQNMTYSSRMKAQVHFQVYTQKLVRSD 168
Query: 685 KFKTGME-QYVNKELEKEDTRSIIIGRLPVMVKSELCWTSESEKRDCDFDHGGYFIVKGA 861
K+KTG + +YV K++ ED R I+IGR+PVMVKSELCW + E+ DC++DHGGYF++KGA
Sbjct: 169 KYKTGKDNKYVEKKVIFEDNRDILIGRIPVMVKSELCWMNGVERGDCEYDHGGYFLIKGA 228
Query: 862 EKTFIAQEQICLRRLWLSSSPTWMVAYRPAEKRKRVYLKLVDTPRFENLGGGEKTLSVYF 1041
EKTFIAQEQICL+RLW+SS+PTWMVAYRP KRKRVY+KL + P+ EN GGEK L+VYF
Sbjct: 229 EKTFIAQEQICLKRLWVSSNPTWMVAYRPIWKRKRVYVKL-EPPKDENNRGGEKVLTVYF 287
Query: 1042 VVTEMPVWILFFALGASSDKEVVNLIDLDIEDTKIVNTLVASIYDADKNCDG----FRKG 1209
TE+P+WILFFALGASSDKEVV+LID +I+D I N LVASI++AD+ + FR+
Sbjct: 288 SSTEIPIWILFFALGASSDKEVVDLIDFNIDDAGISNILVASIHEADREAEKKGMYFRRQ 347
Query: 1210 KNALNHIEKLLKNCKFPPTESVEECIQNFLFPNLKGFKQKARFLGYMVKCLLEAYTGRRK 1389
NA++ ++KL+K+CKFPP ES++ECI +LFPN G KQKARFLGYMVKCLL+AYTGRRK
Sbjct: 348 GNAISFVDKLVKSCKFPPGESIQECISKYLFPNFSGVKQKARFLGYMVKCLLQAYTGRRK 407
Query: 1390 MDNRDDFRNKXXXXXXXXXXXXXKVHLKHAERRMIKAMQRDLYGDRDLQQIENYLDASIV 1569
DNRDDFRNK +VH++HAERRM+KAMQR+LYGDRDL+ IENYLDASI+
Sbjct: 408 CDNRDDFRNKRLELAGELLERELRVHIRHAERRMVKAMQRELYGDRDLRPIENYLDASII 467
Query: 1570 TNGLSRAFSTGAWCHPYKRMERVSGVVATLRRTNPLQMTADMRKTRQQVSYTGRVGDARY 1749
TNGLSRAFSTG W HP+KRMER+SGVVATLRRTNPLQMTADMRKTRQQV YTG+VGDARY
Sbjct: 468 TNGLSRAFSTGQWSHPFKRMERISGVVATLRRTNPLQMTADMRKTRQQVQYTGKVGDARY 527
Query: 1750 PHPSHWGKICFLSTPDGENCGLVKNLASLGLVSTTNLEPLLDKLYDCGMNELVDDTSSVL 1929
PHPSHWGK+CFLSTPDGENCGLVKNLA GLVST L+PL+DKL+DCGM +LVDDTS+ L
Sbjct: 528 PHPSHWGKVCFLSTPDGENCGLVKNLAITGLVSTEVLDPLVDKLFDCGMEKLVDDTSTKL 587
Query: 1930 LGEHKIFLDGDWVGMCQDSESFVEQLRNMRRSNEVPHQVEIKMDREHREIRIFSDAGRIL 2109
G++K+FLDGDWVG+C+D SFV +LR RR E+P QVEIK D + E+RIFSDAGRIL
Sbjct: 588 SGKNKVFLDGDWVGVCEDPISFVVELRTKRRHKELPQQVEIKRDEQQGEVRIFSDAGRIL 647
Query: 2110 RPLLVVENLKKIKALKGGDLSFQFLLDRXXXXXXXXXXXXDCVTAWGIGYLLNADKENPR 2289
RPLLVVENLKK+K KG D +FQ LLD+ DC TAWGI YLL ++P
Sbjct: 648 RPLLVVENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEEDCSTAWGIKYLLKGH-DDPP 706
Query: 2290 RRYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPNIRIDTNIH 2469
+YTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPNIR+DT H
Sbjct: 707 VKYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSH 766
Query: 2470 QLYYPQRPLFRTVLSECLGKSTYTR-QKGMLPRPEYYNGQCAIVAVNVHLGYNQEDSLVM 2646
QLYYPQRPLFRT++S+CLGK Y+ KG++PRPEY+NGQ AIVAVNVHLGYNQEDSLVM
Sbjct: 767 QLYYPQRPLFRTMISDCLGKPGYSEGHKGIVPRPEYFNGQIAIVAVNVHLGYNQEDSLVM 826
Query: 2647 NRASLERGMFRSEHIRSYKAEVDSTEASGKKSKPEDSITFGKLQSKIGRVDSLDDDGFPY 2826
NRASLERGMFRSEHIRSYK+EVD+ E+ KK K EDS+ FGK+QSKIGRVDSLDDDGFP+
Sbjct: 827 NRASLERGMFRSEHIRSYKSEVDNNESLDKKRKSEDSVHFGKMQSKIGRVDSLDDDGFPF 886
Query: 2827 IGANLQTGDIVIGKYTESGTDHSVKLKHTERGMVQKVIRSANDEGKNFAVVSLRQVRTPC 3006
IGANLQ GDIVIG+ ESG DHS+KLKHTERGMVQKV+ SAND+GKNFAVVSLRQVRTPC
Sbjct: 887 IGANLQNGDIVIGRCAESGVDHSIKLKHTERGMVQKVVVSANDDGKNFAVVSLRQVRTPC 946
Query: 3007 LGDKFSSMHGQKGVLGFLESQENFPFTREGIVPDIVINPHAFPSRQTPAQLLEAALGKGI 3186
LGDKFSSMHGQKGVLGFLESQENFPFT +GIVPDIVINPHAFPSRQTP QLLEAALGKGI
Sbjct: 947 LGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGI 1006
Query: 3187 AAGGVLKYATPFAALSVEAITQQLKSCGFSRWGNERVYNGRTGEMIHSLVFMGPTFYQRL 3366
A GG+L++ATPF+ LSV+AI QL GFSRWG+ERVYNGRTGEM+ SL+FMGPTFYQRL
Sbjct: 1007 ACGGLLRHATPFSTLSVDAIADQLHRAGFSRWGHERVYNGRTGEMLRSLIFMGPTFYQRL 1066
Query: 3367 THMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLS 3546
HMAEDKVKFRNTGPVHPLTRQPV+DRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLS
Sbjct: 1067 IHMAEDKVKFRNTGPVHPLTRQPVSDRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLS 1126
Query: 3547 DCSQIHICRKCKSMANVIQRSVLGGRKIRGPYCRICESTEDIVRASVPYGAKLLAQELFS 3726
D + +HICR+CK+++NVIQRSV GGRK+RGPYCR CES+E+IV+ +VPYGAKLL QELFS
Sbjct: 1127 DSAYMHICRRCKNISNVIQRSVAGGRKVRGPYCRYCESSEEIVKVNVPYGAKLLCQELFS 1186
Query: 3727 MNISLKFETEVC 3762
M ISLKFET++C
Sbjct: 1187 MGISLKFETQLC 1198
>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
Length = 1220
Score = 1780 bits (4610), Expect = 0.0
Identities = 871/1213 (71%), Positives = 1010/1213 (83%), Gaps = 6/1213 (0%)
Frame = +1
Query: 142 SFVGMSGSRQERGVGSSE-DKASNGSLMXXXXXXXXXXXXXXXXXXPLGELGEDFLKKFC 318
+ +G S ++ + G+ SS +K SNG M + +L +++LK FC
Sbjct: 35 TLMGASDAKGDLGMSSSMGEKLSNGVQMEIDDDLMGSIE--------IDDLNKEYLKTFC 86
Query: 319 KKTAVAFFEQYGLISHQINSFNDFIKYGLQKVFDSVGEIIIEPGYDPSKRGDGDWRYASL 498
KK AV+FF +YGLI HQINSFNDFIK G+Q+VFDS GEI +EPGYDPSKRG+GDWRYAS+
Sbjct: 87 KKVAVSFFNEYGLIQHQINSFNDFIKNGIQRVFDSFGEIPVEPGYDPSKRGEGDWRYASV 146
Query: 499 KFGKVHVERPKIWSGDKFTTDGGVEFMNMLPRHARLQNMTYAGRMLVETHVQIYTKKLVR 678
+FGKV +ERP++W+G+ G E +N LPRHARLQNMTY+ RM + H Q+YT+KLVR
Sbjct: 147 RFGKVTLERPRVWAGES----DGKESLNFLPRHARLQNMTYSSRMKAQVHFQVYTQKLVR 202
Query: 679 SDKFKTGME-QYVNKELEKEDTRSIIIGRLPVMVKSELCWTSESEKRDCDFDHGGYFIVK 855
SDK+KTG + +YV K++ ED R I+IGR+PVMVKSELCW + E+ DC++DHGGYF++K
Sbjct: 203 SDKYKTGKDNKYVEKKVIFEDNRDILIGRIPVMVKSELCWMNGVERGDCEYDHGGYFLIK 262
Query: 856 GAEKTFIAQEQICLRRLWLSSSPTWMVAYRPAEKRKRVYLKLVDTPRFENLGGGEKTLSV 1035
GAEKTFIAQEQICL+RLW+SS+PTWMVAYRP KRKRVY+KL + P+ EN GGEK L+V
Sbjct: 263 GAEKTFIAQEQICLKRLWVSSNPTWMVAYRPIWKRKRVYVKL-EPPKDENNRGGEKVLTV 321
Query: 1036 YFVVTEMPVWILFFALGASSDKEVVNLIDLDIEDTKIVNTLVASIYDADKNCDG----FR 1203
YF TE+P+WILFFALGASSDKEVV+LID +I+D I N LVASI++AD+ + FR
Sbjct: 322 YFSSTEIPIWILFFALGASSDKEVVDLIDFNIDDAGISNILVASIHEADREAEKKGMYFR 381
Query: 1204 KGKNALNHIEKLLKNCKFPPTESVEECIQNFLFPNLKGFKQKARFLGYMVKCLLEAYTGR 1383
+ NA++ ++KL+K+CKFPP ES++ECI +LFPN G KQKARFLGYMVKCLL+AYTGR
Sbjct: 382 RQGNAISFVDKLVKSCKFPPGESIQECISKYLFPNFSGVKQKARFLGYMVKCLLQAYTGR 441
Query: 1384 RKMDNRDDFRNKXXXXXXXXXXXXXKVHLKHAERRMIKAMQRDLYGDRDLQQIENYLDAS 1563
RK DNRDDFRNK +VH++HAERRM+KAMQR+LYGDRDL+ IENYLDAS
Sbjct: 442 RKCDNRDDFRNKRLELAGELLERELRVHIRHAERRMVKAMQRELYGDRDLRPIENYLDAS 501
Query: 1564 IVTNGLSRAFSTGAWCHPYKRMERVSGVVATLRRTNPLQMTADMRKTRQQVSYTGRVGDA 1743
I+TNGLSRAFSTG W HP+KRMER+SGVVATLRRTNPLQMTADMRKTRQQV YTG+VGDA
Sbjct: 502 IITNGLSRAFSTGQWSHPFKRMERISGVVATLRRTNPLQMTADMRKTRQQVQYTGKVGDA 561
Query: 1744 RYPHPSHWGKICFLSTPDGENCGLVKNLASLGLVSTTNLEPLLDKLYDCGMNELVDDTSS 1923
RYPHPSHWGK+CFLSTPDGENCGLVKNLA GLVST L+PL+DKL+DCGM +LVDDTS+
Sbjct: 562 RYPHPSHWGKVCFLSTPDGENCGLVKNLAITGLVSTEVLDPLVDKLFDCGMEKLVDDTST 621
Query: 1924 VLLGEHKIFLDGDWVGMCQDSESFVEQLRNMRRSNEVPHQVEIKMDREHREIRIFSDAGR 2103
L G++K+FLDGDWVG+C+D SFV +LR RR E+P QVEIK D + E+RIFSDAGR
Sbjct: 622 KLSGKNKVFLDGDWVGVCEDPISFVVELRTKRRHKELPQQVEIKRDEQQGEVRIFSDAGR 681
Query: 2104 ILRPLLVVENLKKIKALKGGDLSFQFLLDRXXXXXXXXXXXXDCVTAWGIGYLLNADKEN 2283
ILRPLLVVENLKK+K KG D +FQ LLD+ DC TAWGI YLL ++
Sbjct: 682 ILRPLLVVENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEEDCSTAWGIKYLLKGH-DD 740
Query: 2284 PRRRYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPNIRIDTN 2463
P +YTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPNIR+DT
Sbjct: 741 PPVKYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTL 800
Query: 2464 IHQLYYPQRPLFRTVLSECLGKSTYTRQKGMLPRPEYYNGQCAIVAVNVHLGYNQEDSLV 2643
HQLYYPQRPLFRT++S+ LPRPEY+NGQ AIVAVNVHLGYNQEDSLV
Sbjct: 801 SHQLYYPQRPLFRTMISD-------------LPRPEYFNGQIAIVAVNVHLGYNQEDSLV 847
Query: 2644 MNRASLERGMFRSEHIRSYKAEVDSTEASGKKSKPEDSITFGKLQSKIGRVDSLDDDGFP 2823
MNRASLERGMFRSEHIRSYK+EVD+ E+ KK K EDS+ FGK+QSKIGRVDSLDDDGFP
Sbjct: 848 MNRASLERGMFRSEHIRSYKSEVDNNESLDKKRKSEDSVHFGKMQSKIGRVDSLDDDGFP 907
Query: 2824 YIGANLQTGDIVIGKYTESGTDHSVKLKHTERGMVQKVIRSANDEGKNFAVVSLRQVRTP 3003
+IGANLQ GDIVIG+ ESG DHS+KLKHTERGMVQKV+ SAND+GKNFAVVSLRQVRTP
Sbjct: 908 FIGANLQNGDIVIGRCAESGVDHSIKLKHTERGMVQKVVVSANDDGKNFAVVSLRQVRTP 967
Query: 3004 CLGDKFSSMHGQKGVLGFLESQENFPFTREGIVPDIVINPHAFPSRQTPAQLLEAALGKG 3183
CLGDKFSSMHGQKGVLGFLESQENFPFT +GIVPDIVINPHAFPSRQTP QLLEAALGKG
Sbjct: 968 CLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKG 1027
Query: 3184 IAAGGVLKYATPFAALSVEAITQQLKSCGFSRWGNERVYNGRTGEMIHSLVFMGPTFYQR 3363
IA GG+L++ATPF+ LSV+AI QL GFSRWG+ERVYNGRTGEM+ SL+FMGPTFYQR
Sbjct: 1028 IACGGLLRHATPFSTLSVDAIADQLHRAGFSRWGHERVYNGRTGEMLRSLIFMGPTFYQR 1087
Query: 3364 LTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTL 3543
L HMAEDKVKFRNTGPVHPLTRQPV+DRKRFGGIKFGEMERDCLIAHGAAANLHERLFTL
Sbjct: 1088 LIHMAEDKVKFRNTGPVHPLTRQPVSDRKRFGGIKFGEMERDCLIAHGAAANLHERLFTL 1147
Query: 3544 SDCSQIHICRKCKSMANVIQRSVLGGRKIRGPYCRICESTEDIVRASVPYGAKLLAQELF 3723
SD + +HICR+CK+++NVIQRSV GGRK+RGPYCR CES+E+IV+ +VPYGAKLL QELF
Sbjct: 1148 SDSAYMHICRRCKNISNVIQRSVAGGRKVRGPYCRYCESSEEIVKVNVPYGAKLLCQELF 1207
Query: 3724 SMNISLKFETEVC 3762
SM ISLKFET++C
Sbjct: 1208 SMGISLKFETQLC 1220
>gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum lycopersicum]
Length = 1123
Score = 1726 bits (4471), Expect = 0.0
Identities = 823/1071 (76%), Positives = 935/1071 (87%), Gaps = 1/1071 (0%)
Frame = +1
Query: 286 ELGEDFLKKFCKKTAVAFFEQYGLISHQINSFNDFIKYGLQKVFDSVGEIIIEPGYDPSK 465
ELGE FLK FCKK + FFE+YG ISHQINS+NDFI YG+Q+VFDSVGEI +EPGYDPSK
Sbjct: 54 ELGESFLKNFCKKASTGFFEKYGSISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSK 113
Query: 466 RGDGDWRYASLKFGKVHVERPKIWSGDKFTTDGGVEFMNMLPRHARLQNMTYAGRMLVET 645
RGDGDW++AS+KFGKV +ERPK W+G+KF+ GG E++++LPRHARLQNMTY+ R++VET
Sbjct: 114 RGDGDWKHASVKFGKVTLERPKFWAGEKFSVGGGKEYLDLLPRHARLQNMTYSARIMVET 173
Query: 646 HVQIYTKKLVRSDKFKTGMEQYVNKELEKEDTRSIIIGRLPVMVKSELCWTSESEKRDCD 825
HVQ+YTKKLVRSDKFKTG++++V+KE E E R ++IGR+PVMV SELCW + +K DC+
Sbjct: 174 HVQVYTKKLVRSDKFKTGVDRFVDKEWEVEGKRDVLIGRIPVMVNSELCWMNGVDKLDCE 233
Query: 826 FDHGGYFIVKGAEKTFIAQEQICLRRLWLSSSPTWMVAYRPAEKRKRVYLKLVDTPRFEN 1005
FDHGGYFI KGAEKTFIAQEQ+CL+RLW+S++PTWMV YRP EKRKRVY+KL +T + E+
Sbjct: 234 FDHGGYFIAKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYIKLTETLKLEH 293
Query: 1006 LGGGEKTLSVYFVVTEMPVWILFFALGASSDKEVVNLIDLDIEDTKIVNTLVASIYDADK 1185
+ GGEK LSVY ++ EMP+W+LFFALG SSD+EVVNLID+DIEDT IVN LVASI++ADK
Sbjct: 294 IKGGEKALSVY-ILAEMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIHEADK 352
Query: 1186 NCDGFRKGKNALNHIEKLLKNCKFPPTESVEECIQNFLFPNLKGFKQKARFLGYMVKCLL 1365
NC+ FRKGK AL ++++L+KNCKFPP ESVEECI +LFPNL GFKQKARFLGYMVKCLL
Sbjct: 353 NCEDFRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMVKCLL 412
Query: 1366 EAYTGRRKMDNRDDFRNKXXXXXXXXXXXXXKVHLKHAERRMIKAMQRDLYGDRDLQQIE 1545
++ GRRK+DNRDDFRNK + H+KHAERRM+KAMQRDLYGDR +Q IE
Sbjct: 413 HSFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIE 472
Query: 1546 NYLDASIVTNGLSRAFSTGAWCHPYKRMERVSGVVATLRRTNPLQMTADMRKTRQQVSYT 1725
+YLDASI+TNGLSRAFSTG WCHPYKRMERVSGVVATLRRTNPLQMTADMRK+RQQV+YT
Sbjct: 473 HYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQVTYT 532
Query: 1726 GRVGDARYPHPSHWGKICFLSTPDGENCGLVKNLASLGLVSTTNLEPLLDKLYDCGMNEL 1905
G+VGDARYPHPSHWGK+CFLSTPDGENCGLVKNLAS+GLVST L+P L+ L+ CGM +L
Sbjct: 533 GKVGDARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTIILKPFLETLFRCGMQKL 592
Query: 1906 VDDTSSVLLGEHKIFLDGDWVGMCQDSESFVEQLRNMRRSNEVPHQVEIKMDREHREIRI 2085
VDD S+ L G+ K+ LDG+WVG+C+DS FV +LR RR NEVPHQVE+K D E+RI
Sbjct: 593 VDDCSTSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDELQGEVRI 652
Query: 2086 FSDAGRILRPLLVVENLKKIKALKGGDLSFQFLLDRXXXXXXXXXXXXDCVTAWGIGYLL 2265
FSD GRILRPLLVV NLKKIKALKGGD FQ LLD DC TAWG+ Y+L
Sbjct: 653 FSDPGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGVEYIL 712
Query: 2266 NADKENPRRRYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPN 2445
ADKENP +YTHCELDMSFLLGLSCGIIP+ANHDHARRVLYQSEKHSQQAIGFST NPN
Sbjct: 713 KADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPN 772
Query: 2446 IRIDTNIHQLYYPQRPLFRTVLSECLGKSTYTR-QKGMLPRPEYYNGQCAIVAVNVHLGY 2622
R+DTN HQLYYPQRPLFRT+L++ LGK + QKGMLPRPEY+NGQCAIVAVNVHLGY
Sbjct: 773 NRVDTNTHQLYYPQRPLFRTMLADSLGKPKCAQYQKGMLPRPEYFNGQCAIVAVNVHLGY 832
Query: 2623 NQEDSLVMNRASLERGMFRSEHIRSYKAEVDSTEASGKKSKPEDSITFGKLQSKIGRVDS 2802
NQEDSLVMNRASLERGMFRSEH+RSYKAEVD+ EA KK K EDS+ FGK QSKIGRVDS
Sbjct: 833 NQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAMAKKLKIEDSVNFGKTQSKIGRVDS 892
Query: 2803 LDDDGFPYIGANLQTGDIVIGKYTESGTDHSVKLKHTERGMVQKVIRSANDEGKNFAVVS 2982
LDDDGFP+IGANLQ+GDI+IGK++ESG DHSVKLKHTERGMVQKV+ SANDEGKNFAVVS
Sbjct: 893 LDDDGFPFIGANLQSGDIIIGKFSESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVS 952
Query: 2983 LRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTREGIVPDIVINPHAFPSRQTPAQLL 3162
LRQVR+PCLGDKFSSMHGQKGVLGFLESQENFPFT +GIVPDIVINPHAFPSRQTP QLL
Sbjct: 953 LRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLL 1012
Query: 3163 EAALGKGIAAGGVLKYATPFAALSVEAITQQLKSCGFSRWGNERVYNGRTGEMIHSLVFM 3342
EAALGKGIA GG KYATPF+ LSV+AI +QL+ GF+RWGNERVYNGRTGEM+HSL+FM
Sbjct: 1013 EAALGKGIALGGGQKYATPFSTLSVDAIMEQLQGRGFTRWGNERVYNGRTGEMVHSLIFM 1072
Query: 3343 GPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCL 3495
GPTFYQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCL
Sbjct: 1073 GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCL 1123
>gb|EPS73521.1| hypothetical protein M569_01229, partial [Genlisea aurea]
Length = 1205
Score = 1706 bits (4418), Expect = 0.0
Identities = 838/1166 (71%), Positives = 977/1166 (83%), Gaps = 7/1166 (0%)
Frame = +1
Query: 286 ELGEDFLKKFCKKTAVAFFEQYGLISHQINSFNDFIKYGLQKVFDSVGEIIIEPGYDPSK 465
+L E +K FC+K A +FFEQ+GLISHQ+NS+N+FI +G+ ++F S+GEII+EPGYDPSK
Sbjct: 43 DLDEGVVKSFCRKAATSFFEQHGLISHQLNSYNNFINHGIHQLFASIGEIIVEPGYDPSK 102
Query: 466 RGD-GDWRYASLKFGKVHVERPKIWSGDKFTT-DGGVEFMNMLPRHARLQNMTYAGRMLV 639
RGD G+W+ ASLKFGKV++ERP W+G+KF++ +G + + + P+HARLQNMTYA R+ V
Sbjct: 103 RGDDGEWQKASLKFGKVNLERPSFWTGEKFSSAEGAKDNLELHPKHARLQNMTYAARIKV 162
Query: 640 ETHVQI-YTKKLVRSDKFKTGMEQYVNKELEKEDTRSIIIGRLPVMVKSELCWTSESEKR 816
ETH+++ YT+ LVRS+KF TG+ +V + K + I G+LPVMV S+LCW + K+
Sbjct: 163 ETHLEVVYTEGLVRSEKFTTGVSTHVQRTTLKSLSLEINFGKLPVMVNSDLCWLKSTGKK 222
Query: 817 DCDFDHGGYFIVKGAEKTFIAQEQICLRRLWLSSSPTWMVAYRPAEKRKRVYLKLVDTPR 996
DC+FD GGYFI+KGAEKTFIAQEQICL+RLW+S PTW ++YRP KR+R+YLKLV P+
Sbjct: 223 DCEFDQGGYFIIKGAEKTFIAQEQICLKRLWVSKDPTWTISYRPITKRRRIYLKLV--PK 280
Query: 997 FENLGGGEKTLSVYFVVTEMPVWILFFALGASSDKEVVNLIDLDIEDTKIVNTLVASIYD 1176
E+ GEK L+VYF EMP+WILFFALGA +DKEVV +ID+DIED+ I N L+ASI+D
Sbjct: 281 VESAPVGEKILTVYFSFVEMPIWILFFALGARNDKEVVKMIDMDIEDSAIANILLASIHD 340
Query: 1177 ADKNCDGFRKGKNALNHIEKLLKNCKFPPTESVEECIQNFLFPNLKGFKQKARFLGYMVK 1356
AD +GFRK +A+ H++ L++ K+PPTESVEE Q LFP+LK QKA FL YMVK
Sbjct: 341 ADSKYEGFRKNGSAIKHLKDLMQEGKYPPTESVEEYFQIHLFPHLKSSVQKACFLAYMVK 400
Query: 1357 CLLEAYTGRRKMDNRDDFRNKXXXXXXXXXXXXXKVHLKHAERRMIKAMQRDLYGDRDLQ 1536
CLLE Y GRRK+DNRDD RNK ++ +KHAERRM+++MQRDL RDLQ
Sbjct: 401 CLLECYKGRRKVDNRDDLRNKRLELAGELLERELRIQIKHAERRMMRSMQRDLDKGRDLQ 460
Query: 1537 QIENYLDASIVTNGLSRAFSTGAWCHPYKRMERVSGVVATLRRTNPLQMTADMRKTRQQV 1716
I++YLDASI+TNGLSRAFSTGAW HPYKRMER+SG+VATLRRTNPLQ ADMRKTRQQV
Sbjct: 461 TIDHYLDASIITNGLSRAFSTGAWSHPYKRMERISGIVATLRRTNPLQAIADMRKTRQQV 520
Query: 1717 SYTGRVGDARYPHPSHWGKICFLSTPDGENCGLVKNLASLGLVSTTNL--EPLLDKLYDC 1890
SYTGRVGDARYPHPSHWGKICFLSTPDGENCGLVKNLASLGLVST L E LL K +C
Sbjct: 521 SYTGRVGDARYPHPSHWGKICFLSTPDGENCGLVKNLASLGLVSTEVLDQEGLLKKFREC 580
Query: 1891 GMNELVDDTSSVLLGEHKIFLDGDWVGMCQDSESFVEQLRNMRRSNEVPHQVEIKMDREH 2070
GM +L DDTSS+L G+HKIFLDGD VG+C+DS SFV LR R+ NEVPHQVEIKMD+ +
Sbjct: 581 GMEQLADDTSSLLDGKHKIFLDGDLVGVCRDSSSFVSMLRRRRQKNEVPHQVEIKMDQSN 640
Query: 2071 REIRIFSDAGRILRPLLVVENLKKIKALKGGDLSFQFLLDRXXXXXXXXXXXXDCVTAWG 2250
E+R+F+DAGRILRPLLVV NL+KI LK + FQ LLD DC TAWG
Sbjct: 641 GEVRVFADAGRILRPLLVVRNLRKINDLKS-HVFFQSLLDVGIVELIGPEEEEDCQTAWG 699
Query: 2251 IGYLLNADKENPRRRYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFS 2430
YL A+ ENP +Y+HCELD SFLLGLSCGIIP+ANHDHARRVLYQSEKHSQQAIGFS
Sbjct: 700 TKYLFMAELENPPVKYSHCELDSSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFS 759
Query: 2431 TTNPNIRIDTNIHQLYYPQRPLFRTVLSECLGKSTYT-RQKGMLPRPEYYNGQCAIVAVN 2607
TT+PNIR+DTN HQLYYPQ+PLFRTVLS+CLGK T + R+KG++P P ++NGQCAIVAVN
Sbjct: 760 TTSPNIRVDTNSHQLYYPQKPLFRTVLSDCLGKLTDSCRRKGIIPLPPFFNGQCAIVAVN 819
Query: 2608 VHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDSTEASG-KKSKPEDSITFGKLQSK 2784
VHLGYNQEDSLVMNRASLERGMFRSEH+RSYK++VD++EA+ KK K +D I+FGK+QSK
Sbjct: 820 VHLGYNQEDSLVMNRASLERGMFRSEHVRSYKSDVDNSEAAPVKKFKADDLISFGKVQSK 879
Query: 2785 IGRVDSLDDDGFPYIGANLQTGDIVIGKYTESGTDHSVKLKHTERGMVQKVIRSANDEGK 2964
IGRVDSLD+DGFPY+GANLQTGDIVIGK T +G DHS+KLKHTERGMVQKVI SA+DEG+
Sbjct: 880 IGRVDSLDEDGFPYVGANLQTGDIVIGKCTATGVDHSIKLKHTERGMVQKVILSADDEGR 939
Query: 2965 NFAVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTREGIVPDIVINPHAFPSRQ 3144
N+AVVSLRQVR+PCLGDKFSSMHGQKGVLGFLESQENFPFTR+GIVPDIVINPHAFPSRQ
Sbjct: 940 NYAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTRQGIVPDIVINPHAFPSRQ 999
Query: 3145 TPAQLLEAALGKGIAAGGVLKYATPFAALSVEAITQQLKSCGFSRWGNERVYNGRTGEMI 3324
TP QLLEAALGKGIA GG LKYATPF++ SVE IT QL GFSRWG E+VY+GRTGE +
Sbjct: 1000 TPGQLLEAALGKGIALGGGLKYATPFSSPSVEDITAQLHRLGFSRWGAEKVYDGRTGEAL 1059
Query: 3325 HSLVFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAH 3504
SL+FMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAH
Sbjct: 1060 KSLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAH 1119
Query: 3505 GAAANLHERLFTLSDCSQIHICRKCKSMANVIQRSVLGGRKIRGPYCRICESTEDIVRAS 3684
GAAANLHERLFTLSD SQ+HICRKCK+MANVIQR V GGRK+RGPYCR CES ED+VR +
Sbjct: 1120 GAAANLHERLFTLSDSSQMHICRKCKNMANVIQRPVFGGRKVRGPYCRFCESVEDVVRVN 1179
Query: 3685 VPYGAKLLAQELFSMNISLKFETEVC 3762
VPYGAKLL QELFSM ISLKF+TE+C
Sbjct: 1180 VPYGAKLLCQELFSMGISLKFDTEIC 1205
>gb|EOY29336.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
Length = 1184
Score = 1700 bits (4403), Expect = 0.0
Identities = 818/1160 (70%), Positives = 958/1160 (82%), Gaps = 1/1160 (0%)
Frame = +1
Query: 286 ELGEDFLKKFCKKTAVAFFEQYGLISHQINSFNDFIKYGLQKVFDSVGEIIIEPGYDPSK 465
+LGE+FL+ FCK+ AV+FF++YGLISHQ+NS+N FIKYGLQ FDS GE +I GYDPSK
Sbjct: 31 QLGEEFLRGFCKQAAVSFFKEYGLISHQLNSYNAFIKYGLQNTFDSFGEFLIHSGYDPSK 90
Query: 466 RGDGDWRYASLKFGKVHVERPKIWSGDKFTTDGGVEFMNMLPRHARLQNMTYAGRMLVET 645
+G+GDWR+A ++FGKV VERP W+ GG E +NMLPRHARLQNMTY+ RM V
Sbjct: 91 KGEGDWRHARVRFGKVTVERPTFWA-----VSGGNE-LNMLPRHARLQNMTYSSRMKVNV 144
Query: 646 HVQIYTKKLVRSDKFKTGMEQYVNKELEKEDTRSIIIGRLPVMVKSELCWTSESEKRDCD 825
+Q+YT K V+SDKFKTG E++V +E+ +D R IIIGR+PVMV+S+LCW +E EK DCD
Sbjct: 145 DLQVYTAKSVKSDKFKTGREEFVEEEVVYQDNRDIIIGRIPVMVRSDLCWMNEVEKADCD 204
Query: 826 FDHGGYFIVKGAEKTFIAQEQICLRRLWLSSSPTWMVAYRPAEKRKRVYLKLVDTPRFEN 1005
FDHGGYF++KG EK FIAQEQI ++RLW+S+S W +AYR KR R+ ++LV+ + E
Sbjct: 205 FDHGGYFLIKGTEKIFIAQEQISMKRLWISNSQGWTIAYRSEVKRNRLIIRLVENSKVEY 264
Query: 1006 LGGGEKTLSVYFVVTEMPVWILFFALGASSDKEVVNLIDLDIEDTKIVNTLVASIYDADK 1185
+ GGEK L+VYF+ TE+PVW+LFFALG SSDKEVVNLID + D+ I N L ASI +AD
Sbjct: 265 IKGGEKVLTVYFLSTEIPVWVLFFALGVSSDKEVVNLIDYESNDSSITNILFASIRNADG 324
Query: 1186 NCDGFRKGKNALNHIEKLLKNCKFPPTESVEECIQNFLFPNLKGFKQKARFLGYMVKCLL 1365
C F +G+NA++++ KL+K+ +FPP E +EEC+ +LFP L+ FKQKARFLGYMVKCLL
Sbjct: 325 KCYKFCQGRNAIDYVGKLVKDTRFPPEEGIEECLSTYLFPTLRSFKQKARFLGYMVKCLL 384
Query: 1366 EAYTGRRKMDNRDDFRNKXXXXXXXXXXXXXKVHLKHAERRMIKAMQRDLYGDRDLQQIE 1545
+AYTGR K DNRDDFRNK KVH+ HA RRM K +QRDLY DR ++ IE
Sbjct: 385 QAYTGRLKCDNRDDFRNKRLELAGELLERELKVHIAHARRRMAKTLQRDLYADRTVRPIE 444
Query: 1546 NYLDASIVTNGLSRAFSTGAWCHPYKRMERVSGVVATLRRTNPLQMTADMRKTRQQVSYT 1725
+YLDASIVTNGLSRAFSTGAW HPYKRMER+SGVVA L R NPLQ D+RKTRQQV YT
Sbjct: 445 HYLDASIVTNGLSRAFSTGAWSHPYKRMERISGVVANLGRANPLQTMVDLRKTRQQVQYT 504
Query: 1726 GRVGDARYPHPSHWGKICFLSTPDGENCGLVKNLASLGLVSTTNLEPLLDKLYDCGMNEL 1905
G+VGDARYPHPSHWGK+CFLSTPDGENCGLVKNLA+ GLVST +E ++DKL+D GM EL
Sbjct: 505 GKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTGLVSTNIMESIVDKLFDSGMEEL 564
Query: 1906 VDDTSSVLLGEHKIFLDGDWVGMCQDSESFVEQLRNMRRSNEVPHQVEIKMDREHREIRI 2085
V+DT S L G+ K+FL+G+WVG+C+DS SF ++R RRS E PHQVEIK D E+RI
Sbjct: 565 VNDTCSSLDGKDKVFLNGEWVGVCEDSLSFAAEVRRKRRSKEFPHQVEIKRDEHKGEVRI 624
Query: 2086 FSDAGRILRPLLVVENLKKIKALKGGDLSFQFLLDRXXXXXXXXXXXXDCVTAWGIGYLL 2265
FSD GRILRPLLVV+NL +IKA KG + +FQ LL+ DC TAW I YLL
Sbjct: 625 FSDGGRILRPLLVVDNLNRIKAFKGENYTFQALLEGGIIELVGTEEEEDCRTAWSIKYLL 684
Query: 2266 NADKENPRRRYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPN 2445
+ +YTHCELDMSFLLGLSCGIIP+ANHDHARRVLYQ++KHSQQAIGFSTTNPN
Sbjct: 685 TDVEGKQPVKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPN 744
Query: 2446 IRIDTNIHQLYYPQRPLFRTVLSECLGKSTY-TRQKGMLPRPEYYNGQCAIVAVNVHLGY 2622
IR+DT HQLYYPQRPLFRT+ S+CLGK + QKG+LP+PE YNGQ AIVAVNVHLGY
Sbjct: 745 IRVDTLSHQLYYPQRPLFRTMTSDCLGKLGHPLGQKGVLPKPELYNGQNAIVAVNVHLGY 804
Query: 2623 NQEDSLVMNRASLERGMFRSEHIRSYKAEVDSTEASGKKSKPEDSITFGKLQSKIGRVDS 2802
NQEDSLVMNR+SLERGMFRSEH+RSYKAEVD+ E K+ K ED + FGK+QSKIGRVDS
Sbjct: 805 NQEDSLVMNRSSLERGMFRSEHVRSYKAEVDNKEIQDKRRKSEDIVNFGKIQSKIGRVDS 864
Query: 2803 LDDDGFPYIGANLQTGDIVIGKYTESGTDHSVKLKHTERGMVQKVIRSANDEGKNFAVVS 2982
LDDDGFPY+GANLQ GDIVIG+ ESG DHS+KLKHTERGMVQKV+ S+ND+GKN+AVVS
Sbjct: 865 LDDDGFPYVGANLQCGDIVIGRCAESGADHSIKLKHTERGMVQKVVLSSNDDGKNYAVVS 924
Query: 2983 LRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTREGIVPDIVINPHAFPSRQTPAQLL 3162
LRQVR+PCLGDKFSSMHGQKGVLGFLESQENFPFT +GIVPDIVINPHAFPSRQTP QLL
Sbjct: 925 LRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTTQGIVPDIVINPHAFPSRQTPGQLL 984
Query: 3163 EAALGKGIAAGGVLKYATPFAALSVEAITQQLKSCGFSRWGNERVYNGRTGEMIHSLVFM 3342
EAALGKGIA GG +KYATPF+ +SV+AIT+QL GFSRWGNERVYNGRTGEM+ SL+FM
Sbjct: 985 EAALGKGIACGGSMKYATPFSTISVDAITEQLHRAGFSRWGNERVYNGRTGEMVRSLIFM 1044
Query: 3343 GPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANL 3522
GPTFYQRL HMAEDKVKFRNTGPVHPLTRQPVADRKR+GGIKFGEMERDCLIAHGA+ANL
Sbjct: 1045 GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRYGGIKFGEMERDCLIAHGASANL 1104
Query: 3523 HERLFTLSDCSQIHICRKCKSMANVIQRSVLGGRKIRGPYCRICESTEDIVRASVPYGAK 3702
HERL TLSD SQ+H+CR CK++ANVI+R+V GGRKIRGPYCR C+S +DIVR +VPYGAK
Sbjct: 1105 HERLVTLSDSSQMHVCRNCKNVANVIERAVPGGRKIRGPYCRGCQSVDDIVRVNVPYGAK 1164
Query: 3703 LLAQELFSMNISLKFETEVC 3762
LL QELFSM I+LKFET++C
Sbjct: 1165 LLCQELFSMGINLKFETQLC 1184
>gb|EMJ26641.1| hypothetical protein PRUPE_ppa000410mg [Prunus persica]
Length = 1200
Score = 1697 bits (4394), Expect = 0.0
Identities = 826/1163 (71%), Positives = 958/1163 (82%), Gaps = 4/1163 (0%)
Frame = +1
Query: 286 ELGEDFLKKFCKKTAVAFFEQYGLISHQINSFNDFIKYGLQKVFDSVGEIIIEPGYDPSK 465
+LGE FLK FCK+ A+AFF +YGLISHQINS+NDFIK G+Q+VFDS GEII+EPGYDPSK
Sbjct: 45 DLGEGFLKFFCKEAAIAFFNEYGLISHQINSYNDFIKNGIQRVFDSFGEIIVEPGYDPSK 104
Query: 466 RGDGDWRYASLKFGKVHVERPKIWSGDKFTTDGGVEFMNMLPRHARLQNMTYAGRMLVET 645
+G+ +WRYAS+KFGKV + P W G +D E+ MLPRHARLQNM+YA +M V
Sbjct: 105 KGESEWRYASVKFGKVTLGMPSFWGG----SDDEKEY-KMLPRHARLQNMSYASKMKVNI 159
Query: 646 HVQIYTKKLVRSDKFKTGMEQYVNKELEKEDTRSIIIGRLPVMVKSELCWTSESEKRDCD 825
V++YT+KLV SDKFKTG QY++K++ DTR IIIG +PVMVKS+LCW + EK DCD
Sbjct: 160 TVEVYTQKLVSSDKFKTGKSQYLDKQILSTDTRDIIIGSVPVMVKSDLCWMKDFEKGDCD 219
Query: 826 FDHGGYFIVKGAEKTFIAQEQICLRRLWLSSSPTWMVAYRPAEKRKRVYLKLVDTPRFEN 1005
FDHGGYFI+KGAEKTFIAQEQ CL+RL ++++ VAYR KR R+ ++LV + EN
Sbjct: 220 FDHGGYFIIKGAEKTFIAQEQSCLKRLLITNNQGLTVAYRSEVKRHRLIIRLVGISKLEN 279
Query: 1006 LGGGEKTLSVYFVVTEMPVWILFFALGASSDKEVVNLIDLDIEDTKIVNTLVASIYDADK 1185
+ G EK L+VYF+ TE+PVWI FFALG SSD+EV+NLID D ED I N L ASI DADK
Sbjct: 280 IEGVEKVLTVYFMSTEIPVWIWFFALGVSSDREVMNLIDYDSEDASISNILFASIRDADK 339
Query: 1186 NCD----GFRKGKNALNHIEKLLKNCKFPPTESVEECIQNFLFPNLKGFKQKARFLGYMV 1353
D GFR+GKNAL +++++++ FPP ES+EECI +LFPNLKG KQKARFLGYMV
Sbjct: 340 LNDKVDGGFRRGKNALKYVDEVIRKTAFPPGESMEECISLYLFPNLKGLKQKARFLGYMV 399
Query: 1354 KCLLEAYTGRRKMDNRDDFRNKXXXXXXXXXXXXXKVHLKHAERRMIKAMQRDLYGDRDL 1533
K LL+AY GRRK DNRDDFRNK K H+ HA RRM KA+QRDLYGDR +
Sbjct: 400 KSLLQAYAGRRKCDNRDDFRNKRLDLAGELLERELKAHIGHARRRMAKALQRDLYGDRAV 459
Query: 1534 QQIENYLDASIVTNGLSRAFSTGAWCHPYKRMERVSGVVATLRRTNPLQMTADMRKTRQQ 1713
+ IE+YLDASIVTNG+SRAFSTGAWCHP+KRMER+SGVVAT+ R NPLQ DMRKTRQQ
Sbjct: 460 RPIEHYLDASIVTNGISRAFSTGAWCHPFKRMERMSGVVATVGRANPLQTMVDMRKTRQQ 519
Query: 1714 VSYTGRVGDARYPHPSHWGKICFLSTPDGENCGLVKNLASLGLVSTTNLEPLLDKLYDCG 1893
V YTG+VGDARYPHPSHWGK+CFLSTPDGENCGLVKNLA+ GLVST LE L+ +L CG
Sbjct: 520 VQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTGLVSTNVLESLIPQLLTCG 579
Query: 1894 MNELVDDTSSVLLGEHKIFLDGDWVGMCQDSESFVEQLRNMRRSNEVPHQVEIKMDREHR 2073
M +LVDDT + L G+ K+FL+GDWVG+C+DS SFV +LR MRR ++PHQVEIK D
Sbjct: 580 MEKLVDDTFTSLRGKDKVFLNGDWVGVCEDSLSFVLELRRMRRRKKLPHQVEIKRDVHQG 639
Query: 2074 EIRIFSDAGRILRPLLVVENLKKIKALKGGDLSFQFLLDRXXXXXXXXXXXXDCVTAWGI 2253
E+RIFSDAGRILRPLLVVENL K+KA KGG SFQ+ LD DC TAWGI
Sbjct: 640 EVRIFSDAGRILRPLLVVENLNKVKASKGGKSSFQYFLDNGIIELIGAEEEEDCSTAWGI 699
Query: 2254 GYLLNADKENPRRRYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFST 2433
YL DK ++THCELDMSFLLGLSCGIIPYANHDHARRVLYQ++KHSQQAIGFST
Sbjct: 700 KYLFMEDKGKSATKFTHCELDMSFLLGLSCGIIPYANHDHARRVLYQAQKHSQQAIGFST 759
Query: 2434 TNPNIRIDTNIHQLYYPQRPLFRTVLSECLGKSTYTRQKGMLPRPEYYNGQCAIVAVNVH 2613
TNPN+R+DT HQL+YPQRPLF+T+ S+CLGK R ++P+PEYYNGQ AIVAVNVH
Sbjct: 760 TNPNLRVDTLSHQLHYPQRPLFQTMTSDCLGKPG--RHNRIVPKPEYYNGQNAIVAVNVH 817
Query: 2614 LGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDSTEASGKKSKPEDSITFGKLQSKIGR 2793
LG+NQEDS+VMNRASLERGMFRSEHIRSYKAEVD+ E+ K+ KP+D + FGK+QSK GR
Sbjct: 818 LGFNQEDSIVMNRASLERGMFRSEHIRSYKAEVDNKESLDKRRKPDDCVNFGKMQSKFGR 877
Query: 2794 VDSLDDDGFPYIGANLQTGDIVIGKYTESGTDHSVKLKHTERGMVQKVIRSANDEGKNFA 2973
VDSLDDDGFPY+GANLQ+GDI+IG+ +ESG DHS+KLKHTERGMVQKV+ S+ND+GKNFA
Sbjct: 878 VDSLDDDGFPYVGANLQSGDIIIGRCSESGADHSIKLKHTERGMVQKVLLSSNDDGKNFA 937
Query: 2974 VVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTREGIVPDIVINPHAFPSRQTPA 3153
VVSLRQVR+PCLGDKFSSMHGQKGVLGFLESQENFPFT +G+VPDIVINPHAFPSRQTP
Sbjct: 938 VVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGVVPDIVINPHAFPSRQTPG 997
Query: 3154 QLLEAALGKGIAAGGVLKYATPFAALSVEAITQQLKSCGFSRWGNERVYNGRTGEMIHSL 3333
QLLEAALGKGIA GG +YATPF+ LSV+ IT QL S GFSRWGNERVYNG TG M+ SL
Sbjct: 998 QLLEAALGKGIACGGSKRYATPFSTLSVDDITDQLHSAGFSRWGNERVYNGATGAMVRSL 1057
Query: 3334 VFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAA 3513
+FMGPTFYQRL HM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA+
Sbjct: 1058 IFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAS 1117
Query: 3514 ANLHERLFTLSDCSQIHICRKCKSMANVIQRSVLGGRKIRGPYCRICESTEDIVRASVPY 3693
ANLHERLFTLSD SQ+H+C+KCK++A VI R+V GGRKIRGP+CRIC+S +D+VR +VPY
Sbjct: 1118 ANLHERLFTLSDSSQMHVCQKCKNVAYVILRTVAGGRKIRGPHCRICDSADDLVRVNVPY 1177
Query: 3694 GAKLLAQELFSMNISLKFETEVC 3762
GAKLL QELFSM ISLKFET C
Sbjct: 1178 GAKLLCQELFSMGISLKFETRFC 1200
>ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citrus clementina]
gi|568850178|ref|XP_006478802.1| PREDICTED: DNA-directed
RNA polymerases IV and V subunit 2-like [Citrus sinensis]
gi|557545145|gb|ESR56123.1| hypothetical protein
CICLE_v10018562mg [Citrus clementina]
Length = 1198
Score = 1694 bits (4387), Expect = 0.0
Identities = 819/1167 (70%), Positives = 960/1167 (82%), Gaps = 6/1167 (0%)
Frame = +1
Query: 280 LGELGEDFLKKFCKKTAVAFFEQYGLISHQINSFNDFIKYGLQKVFDSVGEIIIEPGYDP 459
L +LGE+FLK FC+K AV+FF +YGL+SHQINS+N+FIK GLQK FDS GE I+EPGYDP
Sbjct: 39 LRDLGEEFLKTFCRKAAVSFFNEYGLVSHQINSYNEFIKNGLQKAFDSFGETIVEPGYDP 98
Query: 460 SKRGDGDWRYASLKFGKVHVERPKIWSGDKFTTDGGVEFMNMLPRHARLQNMTYAGRMLV 639
SK+G+G+WRYAS++FG+V +++P ++G+ GG E +M PRHARLQNMTY+ RM V
Sbjct: 99 SKKGEGEWRYASMRFGQVTLDKPSFFAGN-----GGDEH-DMFPRHARLQNMTYSSRMKV 152
Query: 640 ETHVQIYTKKLVRSDKFKTGMEQYVNKELEKEDTRSIIIGRLPVMVKSELCWTSESEKRD 819
+ Q+YT+K V SDKFKTG EQY+ KE+ ++ IIIGR+PVMVKS+LCW EK D
Sbjct: 153 KVQFQVYTQKRVTSDKFKTGREQYIQKEVLSDEATDIIIGRIPVMVKSDLCWMKGVEKGD 212
Query: 820 CDFDHGGYFIVKGAEKTFIAQEQICLRRLWLSSSPTWMVAYRPAEKRKRVYLKLVDTPRF 999
CDFDHGGYFI+KGAEK F+AQEQICL+RLW+S+S W VAY+ KR R+ ++LVD +F
Sbjct: 213 CDFDHGGYFIIKGAEKVFVAQEQICLKRLWVSNSMGWTVAYKSENKRNRLIVRLVDMSKF 272
Query: 1000 ENLGGGEKTLSVYFVVTEMPVWILFFALGASSDKEVVNLIDLDIEDTKIVNTLVASIYDA 1179
E++ GGEK LSVYF+ TE+P+WILFFALG SSDKE+VNLID ED I+N L ASI+DA
Sbjct: 273 EDIKGGEKVLSVYFLSTEIPIWILFFALGVSSDKEIVNLIDFTCEDCSILNILFASIHDA 332
Query: 1180 DKNCDGFRKGKNALNHIEKLLKNCKFPPTESVEECIQNFLFPNLKGFKQKARFLGYMVKC 1359
D CD FRKG+NAL +++KL+K FPP ES EEC+ +LFP+L G KQKARFLGYMVKC
Sbjct: 333 DNKCDEFRKGRNALKYVDKLIKGTTFPPGESTEECMNTYLFPSLHGTKQKARFLGYMVKC 392
Query: 1360 LLEAYTGRRKMDNRDDFRNKXXXXXXXXXXXXXKVHLKHAERRMIKAMQRDLYGDRDLQQ 1539
LL+AY+GRRK DNRDDFRNK KVH+ HA +RM KA+QRDLYGDR ++
Sbjct: 393 LLQAYSGRRKCDNRDDFRNKRLELAGELLERELKVHIAHARKRMAKALQRDLYGDRTVRP 452
Query: 1540 IENYLDASIVTNGLSRAFSTGAWCHPYKRMERVSGVVATLRRTNPLQMTADMRKTRQQVS 1719
IE YLDASI+TNGLSRAFSTGAW HP+KR ER+SG+VA L R NPLQ D+R+TRQQV
Sbjct: 453 IEYYLDASILTNGLSRAFSTGAWSHPFKRTERISGIVANLGRANPLQTLVDLRRTRQQVQ 512
Query: 1720 YTGRVGDARYPHPSHWGKICFLSTPDGENCGLVKNLASLGLVSTTNLEPLLDKLYDCGMN 1899
YTG+VGDARYPHPSHWGKICFLSTPDGENCGLVKNL GLVST+ LEP+ ++L++ GM
Sbjct: 513 YTGKVGDARYPHPSHWGKICFLSTPDGENCGLVKNLGVTGLVSTSILEPIFEQLFNSGME 572
Query: 1900 ELVDDTSSVLLGEHKIFLDGDWVGMCQDSESFVEQLRNMRRSNEVPHQVEIKMDREHREI 2079
+L DD S L G+ K+F+DGDW+G+C+DS SFV +LR RR E+P QVEIK D E+
Sbjct: 573 KLADDASYSLGGKFKVFVDGDWIGVCKDSLSFVSELRRKRRRKELPTQVEIKRDELQSEV 632
Query: 2080 RIFSDAGRILRPLLVVENLKKIKALKGGDLSFQFLLDRXXXXXXXXXXXXDCVTAWGIGY 2259
RIF DAGRILRPLLVVEN+ KIK+L+G + +FQ LLD DC TAWGI Y
Sbjct: 633 RIFMDAGRILRPLLVVENMGKIKSLEGKNYTFQALLDHGIIELVGTEEEEDCCTAWGIKY 692
Query: 2260 LLNADKENPRRRYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTN 2439
LL ++ ++THCELDMSFLLGLSCGIIP+ANHDHARRVLYQS+KHS QAIGF TTN
Sbjct: 693 LLKDIEDKKPIKFTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTN 752
Query: 2440 PNIRIDTNIHQLYYPQRPLFRTVLSECLGKSTYTRQKGMLPRPEYYNGQCAIVAVNVHLG 2619
P+IR+DT HQL+YPQRPLFRT++S+CLGK Y +LPRPE YNGQ AIVAVNVHLG
Sbjct: 753 PSIRVDTLSHQLFYPQRPLFRTMISDCLGKPGYGHNH-ILPRPELYNGQNAIVAVNVHLG 811
Query: 2620 YNQEDSLVMNRASLERGMFRSEHIRSYKAEVDSTEASGKKSKPEDSITFGKLQSKIGRVD 2799
YNQEDSLVMNRASLERGMFRSEHIRSYKAEVD+ E K+ +D + FGK+QSKIGRVD
Sbjct: 812 YNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKEMQVKRRSSDDMVNFGKIQSKIGRVD 871
Query: 2800 SLDDDGFPYIGANLQTGDIVIGKYTESGTDHSVKLKHTERGMVQKVIRSANDEGKNFAVV 2979
SLDDDGFP+IGANLQ GDIVIGKY +SG DHS+KLKHTERGMVQKV+ S+ND+GKNF+VV
Sbjct: 872 SLDDDGFPFIGANLQCGDIVIGKYADSGADHSIKLKHTERGMVQKVVLSSNDDGKNFSVV 931
Query: 2980 SLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTREGIVPDIVINPHAFPSRQTPAQL 3159
SLRQVR+PCLGDKFSSMHGQKGVLGFLESQENFPFT +GIVPDIVINPHAFPSRQTP QL
Sbjct: 932 SLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQL 991
Query: 3160 LEAALGKGIAA------GGVLKYATPFAALSVEAITQQLKSCGFSRWGNERVYNGRTGEM 3321
LEAALGKGIAA G+ +YATPFA SV+AIT+QL GFS+WG ER+Y+GRTGEM
Sbjct: 992 LEAALGKGIAALGKGICSGLKRYATPFATPSVDAITEQLHRAGFSKWGTERLYDGRTGEM 1051
Query: 3322 IHSLVFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIA 3501
+ SL+F+GPTFYQRL HM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIA
Sbjct: 1052 VRSLIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIA 1111
Query: 3502 HGAAANLHERLFTLSDCSQIHICRKCKSMANVIQRSVLGGRKIRGPYCRICESTEDIVRA 3681
HGAAANLHERLFTLSD Q+HICRKCK++ANVIQR V GGRK+RGPYCRIC+S +DIV+A
Sbjct: 1112 HGAAANLHERLFTLSDSYQMHICRKCKNVANVIQRVVGGGRKVRGPYCRICDSGDDIVKA 1171
Query: 3682 SVPYGAKLLAQELFSMNISLKFETEVC 3762
+VPYGAKLL QELFSM I+LKF+TE C
Sbjct: 1172 NVPYGAKLLCQELFSMGITLKFDTEFC 1198
>ref|XP_002324332.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|550317882|gb|EEF02897.2| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 1181
Score = 1664 bits (4310), Expect = 0.0
Identities = 811/1160 (69%), Positives = 945/1160 (81%)
Frame = +1
Query: 280 LGELGEDFLKKFCKKTAVAFFEQYGLISHQINSFNDFIKYGLQKVFDSVGEIIIEPGYDP 459
L ELG++ L+ FCKK A FF++YGLISHQINS+N FI GLQ+VFDS GE+ +EPGYD
Sbjct: 36 LNELGKETLQSFCKKAASLFFDEYGLISHQINSYNAFINSGLQRVFDSFGEVAVEPGYDS 95
Query: 460 SKRGDGDWRYASLKFGKVHVERPKIWSGDKFTTDGGVEFMNMLPRHARLQNMTYAGRMLV 639
SK+ DG+WR AS++FGKV ++RP W G T E NM PRHARLQNMTY+ RM +
Sbjct: 96 SKQKDGEWRRASVRFGKVTLDRPSFWGG----TSSDAEH-NMFPRHARLQNMTYSARMKI 150
Query: 640 ETHVQIYTKKLVRSDKFKTGMEQYVNKELEKEDTRSIIIGRLPVMVKSELCWTSESEKRD 819
+VQ+YT+ + RSDKFKTG+++ V K + + R IIIGR+PVMVKS+LCW + EK D
Sbjct: 151 HVNVQVYTQTVGRSDKFKTGIDKVVQKNVVHTENREIIIGRIPVMVKSDLCWLTTVEKGD 210
Query: 820 CDFDHGGYFIVKGAEKTFIAQEQICLRRLWLSSSPTWMVAYRPAEKRKRVYLKLVDTPRF 999
CDFDHGGYF++KGAEK FIAQEQIC++RLW+S+S W V+Y+ KR R+ ++LV+ +
Sbjct: 211 CDFDHGGYFLIKGAEKVFIAQEQICMKRLWISNSQGWTVSYKSEVKRNRLIVRLVELSKL 270
Query: 1000 ENLGGGEKTLSVYFVVTEMPVWILFFALGASSDKEVVNLIDLDIEDTKIVNTLVASIYDA 1179
E + G +K L VYF+ TE+P+WILFFALG SDKEV++LID D IVN ASI+DA
Sbjct: 271 EYIKGEKKGLCVYFLSTEIPLWILFFALGVRSDKEVIDLIDYASNDASIVNIFFASIHDA 330
Query: 1180 DKNCDGFRKGKNALNHIEKLLKNCKFPPTESVEECIQNFLFPNLKGFKQKARFLGYMVKC 1359
D+ C+ FR+ AL++++KLLK +FPP ES+E+ I +LFP L + KARFLGYMVKC
Sbjct: 331 DEKCEHFRREDRALDYVDKLLKKTRFPPKESIEDAISAYLFPRLNSRRHKARFLGYMVKC 390
Query: 1360 LLEAYTGRRKMDNRDDFRNKXXXXXXXXXXXXXKVHLKHAERRMIKAMQRDLYGDRDLQQ 1539
LLEAYTG RK DNRD FRNK KVH+ HA RRM KA+QRDLYGDRD+
Sbjct: 391 LLEAYTGHRKCDNRDSFRNKRFELASELLERELKVHVSHALRRMTKALQRDLYGDRDVHP 450
Query: 1540 IENYLDASIVTNGLSRAFSTGAWCHPYKRMERVSGVVATLRRTNPLQMTADMRKTRQQVS 1719
IE+YLDASIVTNGL+RAFSTGAWCHP+K MERVSGVV L R NPLQ D+RKTRQQV
Sbjct: 451 IEHYLDASIVTNGLTRAFSTGAWCHPFKWMERVSGVVGNLGRANPLQTMIDLRKTRQQVL 510
Query: 1720 YTGRVGDARYPHPSHWGKICFLSTPDGENCGLVKNLASLGLVSTTNLEPLLDKLYDCGMN 1899
YTG+VGDARYPHPSHWG++CFLSTPDGENCGLVKNLA G+VST E L+DKL+D GM
Sbjct: 511 YTGKVGDARYPHPSHWGRVCFLSTPDGENCGLVKNLAVTGVVSTNISESLVDKLFDSGME 570
Query: 1900 ELVDDTSSVLLGEHKIFLDGDWVGMCQDSESFVEQLRNMRRSNEVPHQVEIKMDREHREI 2079
+LVDDT + L G+HK+FL+G+WVG+C+DS FV +LR+MRR E+P+QVEIK D + RE+
Sbjct: 571 KLVDDTYTKLDGKHKVFLNGEWVGVCEDSCLFVGELRSMRRRRELPYQVEIKRDEQQREV 630
Query: 2080 RIFSDAGRILRPLLVVENLKKIKALKGGDLSFQFLLDRXXXXXXXXXXXXDCVTAWGIGY 2259
RIFSDAGRILRPLLVVENL KIKA KGG+ F LLD+ DC TAWGI +
Sbjct: 631 RIFSDAGRILRPLLVVENLDKIKAFKGGNYIFTSLLDKGIIEFIGTEEEEDCCTAWGIKF 690
Query: 2260 LLNADKENPRRRYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTN 2439
LL + +Y+HCELDMSFLLGLSCGIIP+ANHDHARRVLYQ++KHSQQAIGFSTTN
Sbjct: 691 LLADIEGKQPMKYSHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTN 750
Query: 2440 PNIRIDTNIHQLYYPQRPLFRTVLSECLGKSTYTRQKGMLPRPEYYNGQCAIVAVNVHLG 2619
PNIR+DT HQL+YPQRPLFRT++S+CL +LP+PE +NGQ AIVAVNVHLG
Sbjct: 751 PNIRVDTLSHQLHYPQRPLFRTMISDCL----------VLPKPELFNGQNAIVAVNVHLG 800
Query: 2620 YNQEDSLVMNRASLERGMFRSEHIRSYKAEVDSTEASGKKSKPEDSITFGKLQSKIGRVD 2799
YNQEDSLVMNRASLERGMFRSEHIRSYKAEVD+ E + K+ K EDSITFGK+QSKIGRVD
Sbjct: 801 YNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKELTDKRRKSEDSITFGKIQSKIGRVD 860
Query: 2800 SLDDDGFPYIGANLQTGDIVIGKYTESGTDHSVKLKHTERGMVQKVIRSANDEGKNFAVV 2979
SLDDDGFP+IGAN+Q+GDIVIGK ESG DHSVKLKHTERGMVQKV+ S+NDEGKNFAVV
Sbjct: 861 SLDDDGFPFIGANMQSGDIVIGKCAESGADHSVKLKHTERGMVQKVVLSSNDEGKNFAVV 920
Query: 2980 SLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTREGIVPDIVINPHAFPSRQTPAQL 3159
SLRQVR+PCLGDKFSSMHGQKGVLGFLESQENFPFT +G+VPDIVINPHAFPSRQTP QL
Sbjct: 921 SLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGVVPDIVINPHAFPSRQTPGQL 980
Query: 3160 LEAALGKGIAAGGVLKYATPFAALSVEAITQQLKSCGFSRWGNERVYNGRTGEMIHSLVF 3339
LEAALGKGIA GG +YATPF+ LSV+ I QL FSRWGNERVYNGRTGEM+ SL+F
Sbjct: 981 LEAALGKGIACGGSKRYATPFSTLSVDDIIDQLHRAKFSRWGNERVYNGRTGEMVRSLIF 1040
Query: 3340 MGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAAN 3519
MGPTFYQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA+AN
Sbjct: 1041 MGPTFYQRLVHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASAN 1100
Query: 3520 LHERLFTLSDCSQIHICRKCKSMANVIQRSVLGGRKIRGPYCRICESTEDIVRASVPYGA 3699
LHERLFTLSD S++HIC+KCK++ANVIQR V GGRKIRGPYCR+CES +D+V+ SVPYGA
Sbjct: 1101 LHERLFTLSDSSEMHICQKCKNVANVIQRGVPGGRKIRGPYCRVCESVDDLVKVSVPYGA 1160
Query: 3700 KLLAQELFSMNISLKFETEV 3759
KLL QELFSM ISLKF+T V
Sbjct: 1161 KLLCQELFSMGISLKFDTRV 1180
>ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis]
gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase
subunit, putative [Ricinus communis]
Length = 1203
Score = 1659 bits (4296), Expect = 0.0
Identities = 803/1162 (69%), Positives = 947/1162 (81%), Gaps = 1/1162 (0%)
Frame = +1
Query: 280 LGELGEDFLKKFCKKTAVAFFEQYGLISHQINSFNDFIKYGLQKVFDSVGEIIIEPGYDP 459
L ++GE LK FC K A FF +YGLISHQINS+NDFI G+QK FDS GE+++EPGYDP
Sbjct: 51 LTDIGEAKLKDFCNKAATLFFNEYGLISHQINSYNDFINNGIQKAFDSFGELVVEPGYDP 110
Query: 460 SKRGDGDWRYASLKFGKVHVERPKIWSGDKFTTDGGVEFMNMLPRHARLQNMTYAGRMLV 639
SK+G+ +WRYAS+KFGKV +E+P WSG + MLPRHARLQNMTY+ +M V
Sbjct: 111 SKKGENEWRYASVKFGKVALEKPTFWSG--------ADEHKMLPRHARLQNMTYSSKMKV 162
Query: 640 ETHVQIYTKKLVRSDKFKTGMEQYVNKELEKEDTRSIIIGRLPVMVKSELCWTSESEKRD 819
V++YT+K+VRSDKFKTG +QYV+KE+ D R+I IG LPVMVKS+LCW +EK D
Sbjct: 163 NVSVEVYTRKVVRSDKFKTGKDQYVDKEVLNTDNRNITIGSLPVMVKSDLCWMKTAEKGD 222
Query: 820 CDFDHGGYFIVKGAEKTFIAQEQICLRRLWLSSSPTWMVAYRPAEKRKRVYLKLVDTPRF 999
CDFDHGGYF++KGAEK FIAQEQICL+RLW+S+ W V+Y+ KR R+ ++LV
Sbjct: 223 CDFDHGGYFLIKGAEKVFIAQEQICLKRLWISNIQGWTVSYKSEIKRNRLIVRLVGLSAL 282
Query: 1000 ENLGGGEKTLSVYFVVTEMPVWILFFALGASSDKEVVNLIDLDIEDTKIVNTLVASIYDA 1179
E++ +K L+VYF+ TE+P+WILFFALG +SDKEV++LI D +IVN ASI+DA
Sbjct: 283 EDVKAEKKCLTVYFLSTEIPLWILFFALGVTSDKEVIDLIGYGSNDARIVNIFFASIHDA 342
Query: 1180 DKNCDGFRKGKNALNHIEKLLKNCKFPPTESVEECIQNFLFPNLKGFKQKARFLGYMVKC 1359
D+ +GFR+GK AL ++ + ++ +FPP E+ E+ +LFP L +QKARFLGYMVKC
Sbjct: 343 DEKTEGFRRGKEALEYVVRQIRGTRFPPGEN-EDFFLLYLFPTLHSLRQKARFLGYMVKC 401
Query: 1360 LLEAYTGRRKMDNRDDFRNKXXXXXXXXXXXXXKVHLKHAERRMIKAMQRDLYGDRDLQQ 1539
LL+AY G+RK +N D FRNK KVH+ HA RRM KA+Q+DLYGDRD++
Sbjct: 402 LLQAYNGQRKCNNWDSFRNKRFELAKELLERELKVHIAHARRRMAKALQKDLYGDRDVRP 461
Query: 1540 IENYLDASIVTNGLSRAFSTGAWCHPYKRMERVSGVVATLRRTNPLQMTADMRKTRQQVS 1719
IE+YLDASIVTNGLSRAFSTGAW HPYKRMER+SGVVA L R NPLQ D+RKTR V
Sbjct: 462 IEHYLDASIVTNGLSRAFSTGAWSHPYKRMERISGVVANLGRANPLQTMVDLRKTRYHVQ 521
Query: 1720 YTGRVGDARYPHPSHWGKICFLSTPDGENCGLVKNLASLGLVSTTNLEPLLDKLYDCGMN 1899
YTG+VGDAR+PHPSHWG++CFLSTPDGENCGLVKNLA+ GLVS LEPL+DKL GM
Sbjct: 522 YTGKVGDARFPHPSHWGRVCFLSTPDGENCGLVKNLATTGLVSVNILEPLIDKLIARGME 581
Query: 1900 ELVDDTSSVLLGEHKIFLDGDWVGMCQDSESFVEQLRNMRRSNEVPHQVEIKMDREHREI 2079
++ +D+ S L + K+FL+G+WVG+C+DS FV +LR +RR ++P QVEIK D + +E+
Sbjct: 582 KVPEDSHSDLDEKDKVFLNGEWVGVCEDSRLFVAELRRLRRRKKLPQQVEIKRDEQQQEV 641
Query: 2080 RIFSDAGRILRPLLVVENLKKIKALKGGDLSFQFLLDRXXXXXXXXXXXXDCVTAWGIGY 2259
RIFSDAGRILRPLLVV+NL KI+A KGG+ +FQ LLD+ DC TAWGI +
Sbjct: 642 RIFSDAGRILRPLLVVQNLHKIEAFKGGNCTFQSLLDKGIIEFVGTEEEEDCSTAWGIKF 701
Query: 2260 LLNADKENPRRRYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTN 2439
LL+ +YTHCELDMSFLLGLSCGIIP+ANHDHARRVLYQ++KHSQQAIGF TTN
Sbjct: 702 LLSGVDGKQSLKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFPTTN 761
Query: 2440 PNIRIDTNIHQLYYPQRPLFRTVLSECLGKSTYTR-QKGMLPRPEYYNGQCAIVAVNVHL 2616
PNIR+DT HQLYYPQRPLFRTV S+CLGK TR G++P+PE YNGQ AIVAVNVHL
Sbjct: 762 PNIRVDTLSHQLYYPQRPLFRTVTSDCLGKPGDTRGHNGIVPKPELYNGQNAIVAVNVHL 821
Query: 2617 GYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDSTEASGKKSKPEDSITFGKLQSKIGRV 2796
GYNQEDSLVMNRASLERGMFRSEHIRSYKA+VD+ E K+ K +D++ FGK+ SKIGRV
Sbjct: 822 GYNQEDSLVMNRASLERGMFRSEHIRSYKADVDNKELLDKRRKYDDNVNFGKIPSKIGRV 881
Query: 2797 DSLDDDGFPYIGANLQTGDIVIGKYTESGTDHSVKLKHTERGMVQKVIRSANDEGKNFAV 2976
DSLDDDGFP+IGANLQ+GDIVIG+ ESG DHS+KLKHTERGMVQKV+ S+NDEGKNFAV
Sbjct: 882 DSLDDDGFPFIGANLQSGDIVIGRCAESGPDHSIKLKHTERGMVQKVVLSSNDEGKNFAV 941
Query: 2977 VSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTREGIVPDIVINPHAFPSRQTPAQ 3156
VSLRQVR+PCLGDKFSSMHGQKGVLGFLESQENFPFTR+GIVPDIVINPH+FPSRQTP Q
Sbjct: 942 VSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTRQGIVPDIVINPHSFPSRQTPGQ 1001
Query: 3157 LLEAALGKGIAAGGVLKYATPFAALSVEAITQQLKSCGFSRWGNERVYNGRTGEMIHSLV 3336
LLEAALGKGIA GG +KYATPF+ LSVEAIT QL GFSRWGNERVYNGRTGEM+ SL+
Sbjct: 1002 LLEAALGKGIACGGSMKYATPFSTLSVEAITNQLHRAGFSRWGNERVYNGRTGEMVRSLI 1061
Query: 3337 FMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAA 3516
FMGPTFYQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA+A
Sbjct: 1062 FMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASA 1121
Query: 3517 NLHERLFTLSDCSQIHICRKCKSMANVIQRSVLGGRKIRGPYCRICESTEDIVRASVPYG 3696
NLHERLFTLSD SQ+HIC+KCK++ANVIQR+V GGRKIRGPYCR+CES ++IV+ +VPYG
Sbjct: 1122 NLHERLFTLSDSSQMHICQKCKNVANVIQRAVPGGRKIRGPYCRVCESVDEIVKVNVPYG 1181
Query: 3697 AKLLAQELFSMNISLKFETEVC 3762
AKLL QELFSM ISLKFET +C
Sbjct: 1182 AKLLCQELFSMGISLKFETRLC 1203
>ref|XP_004501385.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cicer
arietinum]
Length = 1199
Score = 1649 bits (4269), Expect = 0.0
Identities = 798/1162 (68%), Positives = 940/1162 (80%), Gaps = 1/1162 (0%)
Frame = +1
Query: 280 LGELGEDFLKKFCKKTAVAFFEQYGLISHQINSFNDFIKYGLQKVFDSVGEIIIEPGYDP 459
L ELG+D ++ FCKK ++ FF++YGLISHQINS+N F GLQ FDS G++ + PG+DP
Sbjct: 44 LKELGDDMVRYFCKKASIMFFDEYGLISHQINSYNQFATSGLQNTFDSFGDLTVTPGFDP 103
Query: 460 SKRGDGD-WRYASLKFGKVHVERPKIWSGDKFTTDGGVEFMNMLPRHARLQNMTYAGRML 636
SK+GD + +RYAS+KFGKV ++RP W G+ G + M MLPRHARLQ MTYA +M
Sbjct: 104 SKKGDNEHYRYASVKFGKVTLDRPMFWCGE-----GNTQEMKMLPRHARLQRMTYASKMK 158
Query: 637 VETHVQIYTKKLVRSDKFKTGMEQYVNKELEKEDTRSIIIGRLPVMVKSELCWTSESEKR 816
V VQ+Y K VRSDKFKTG E+Y+++E+ ++ R I IGRLPVMVKS+LCW + EK
Sbjct: 159 VNVQVQVYIPKKVRSDKFKTGKEEYIDREIIMDENREITIGRLPVMVKSDLCWMNGVEKG 218
Query: 817 DCDFDHGGYFIVKGAEKTFIAQEQICLRRLWLSSSPTWMVAYRPAEKRKRVYLKLVDTPR 996
DC+FDHGGYF++KGAEK FIAQEQI L+RLW+++ P W VAY+ KR R+ +KLV+
Sbjct: 219 DCEFDHGGYFLIKGAEKIFIAQEQIFLKRLWVTNVPYWAVAYKSQMKRNRMVVKLVENTT 278
Query: 997 FENLGGGEKTLSVYFVVTEMPVWILFFALGASSDKEVVNLIDLDIEDTKIVNTLVASIYD 1176
E + GEK L+VYF+ E+PVW+LFFALG +SDK++V+LID D +I N L ASI +
Sbjct: 279 VEGIKNGEKVLTVYFLSVEIPVWLLFFALGVTSDKQIVDLIDYGEGDGRIQNILFASIRE 338
Query: 1177 ADKNCDGFRKGKNALNHIEKLLKNCKFPPTESVEECIQNFLFPNLKGFKQKARFLGYMVK 1356
AD+ C+ FR+GKNAL +IE+ +K +FPP ES++EC+ ++FPN+KG +KAR+L YMVK
Sbjct: 339 ADEKCEQFRRGKNALLYIEERVKGVQFPPPESIDECLNMYVFPNIKGLNRKARYLAYMVK 398
Query: 1357 CLLEAYTGRRKMDNRDDFRNKXXXXXXXXXXXXXKVHLKHAERRMIKAMQRDLYGDRDLQ 1536
LL AYTGRRK DNRDDFRNK KVH+ HA +RM KA+QRDLYGDRD+
Sbjct: 399 VLLLAYTGRRKTDNRDDFRNKRLELAGELLERELKVHIAHARKRMAKALQRDLYGDRDVH 458
Query: 1537 QIENYLDASIVTNGLSRAFSTGAWCHPYKRMERVSGVVATLRRTNPLQMTADMRKTRQQV 1716
QIE+YLDASI+TNGL RAFSTGAW HPYKRMER+SGVVATL RTNPLQ A++R+TRQQV
Sbjct: 459 QIEHYLDASIITNGLQRAFSTGAWTHPYKRMERISGVVATLGRTNPLQTMAELRRTRQQV 518
Query: 1717 SYTGRVGDARYPHPSHWGKICFLSTPDGENCGLVKNLASLGLVSTTNLEPLLDKLYDCGM 1896
YTG+VGDARYPHPSHWGK+CFLSTPDGENCGLVKN+A GLVST E +L +L+ CGM
Sbjct: 519 QYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNMAVTGLVSTNVTESILPQLFACGM 578
Query: 1897 NELVDDTSSVLLGEHKIFLDGDWVGMCQDSESFVEQLRNMRRSNEVPHQVEIKMDREHRE 2076
ELVDDT++VL + K+FL+GDWVG+C DS SFV +LRN RR NE+PHQVEIK D E
Sbjct: 579 EELVDDTTAVLGNKDKVFLNGDWVGVCSDSASFVAELRNRRRKNELPHQVEIKRDPSQEE 638
Query: 2077 IRIFSDAGRILRPLLVVENLKKIKALKGGDLSFQFLLDRXXXXXXXXXXXXDCVTAWGIG 2256
+RI SDAGRILRPLLVV NL KIK K SFQ LLD DC TAWG+
Sbjct: 639 VRILSDAGRILRPLLVVSNLLKIKGSKSDPKSFQSLLDNGLIELIGPEEEEDCKTAWGVP 698
Query: 2257 YLLNADKENPRRRYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTT 2436
YL + ++ + YTHCELDMSFLLGLSC ++P+ANHDHARRVLYQS+KHS QAIGFSTT
Sbjct: 699 YLFGKEGKSSVK-YTHCELDMSFLLGLSCSLVPFANHDHARRVLYQSQKHSSQAIGFSTT 757
Query: 2437 NPNIRIDTNIHQLYYPQRPLFRTVLSECLGKSTYTRQKGMLPRPEYYNGQCAIVAVNVHL 2616
NP+IR+D HQL+YPQ+PLF+T+ S+CLGK Y +LP+ E+YNGQ AIVAVNVHL
Sbjct: 758 NPDIRVDALSHQLFYPQKPLFQTMTSDCLGKPGYLGPSKLLPKSEFYNGQNAIVAVNVHL 817
Query: 2617 GYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDSTEASGKKSKPEDSITFGKLQSKIGRV 2796
GYNQEDSLVMNRASL+RGMFRSEHIRSYKAE ++ E++ KK KPED + FGK+QSKIGRV
Sbjct: 818 GYNQEDSLVMNRASLQRGMFRSEHIRSYKAENENKESTEKKRKPEDIVNFGKIQSKIGRV 877
Query: 2797 DSLDDDGFPYIGANLQTGDIVIGKYTESGTDHSVKLKHTERGMVQKVIRSANDEGKNFAV 2976
DSLDDDGFP++GANLQ GDI+IG+ +SG DHS+KLKHTERG VQKV+ S+NDEGKNFAV
Sbjct: 878 DSLDDDGFPFVGANLQIGDIIIGRCADSGADHSIKLKHTERGYVQKVVLSSNDEGKNFAV 937
Query: 2977 VSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTREGIVPDIVINPHAFPSRQTPAQ 3156
VSLRQVR+P LGDKFSSMHGQKGVLGFLESQENFPFT++GIVPDIVINPHAFPSRQTP Q
Sbjct: 938 VSLRQVRSPVLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQ 997
Query: 3157 LLEAALGKGIAAGGVLKYATPFAALSVEAITQQLKSCGFSRWGNERVYNGRTGEMIHSLV 3336
LLEAALGKGIA G L+ ATPF+ SVEAIT QL GFSRWGNERVYNGRTGEM+ SL+
Sbjct: 998 LLEAALGKGIACVGSLRNATPFSTSSVEAITDQLHRAGFSRWGNERVYNGRTGEMVRSLI 1057
Query: 3337 FMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAA 3516
FMGPTFYQRL HM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA+A
Sbjct: 1058 FMGPTFYQRLHHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASA 1117
Query: 3517 NLHERLFTLSDCSQIHICRKCKSMANVIQRSVLGGRKIRGPYCRICESTEDIVRASVPYG 3696
NL+ERLFTLSD SQIHIC KCK++ANVI R V GGRKIRGPYCR CES +DIV A VPYG
Sbjct: 1118 NLYERLFTLSDSSQIHICSKCKNVANVILRPVSGGRKIRGPYCRFCESADDIVVAHVPYG 1177
Query: 3697 AKLLAQELFSMNISLKFETEVC 3762
AKLL QELFSM I+LKFETE+C
Sbjct: 1178 AKLLCQELFSMGINLKFETELC 1199
>ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cucumis
sativus]
Length = 1197
Score = 1646 bits (4262), Expect = 0.0
Identities = 795/1164 (68%), Positives = 947/1164 (81%), Gaps = 5/1164 (0%)
Frame = +1
Query: 286 ELGEDFLKKFCKKTAVAFFEQYGLISHQINSFNDFIKYGLQKVFDSVGEIIIEPGYDPSK 465
+LGE FLK FCKK+++AFF QYGLISHQINS+NDFIK G+QK FD G+I+++PGYDPSK
Sbjct: 42 DLGEAFLKDFCKKSSMAFFNQYGLISHQINSYNDFIKNGIQKAFDFFGDILVQPGYDPSK 101
Query: 466 RGDGDWRYASLKFGKVHVERPKIWSGDKFTTDGGVEFMNMLPRHARLQNMTYAGRMLVET 645
+GDG+WRYA++KFGKV +++PK W G G E+ NMLPRHARLQNMTY+ RM +
Sbjct: 102 KGDGEWRYATVKFGKVTLDKPKFWGG----AASGKEY-NMLPRHARLQNMTYSSRMKINI 156
Query: 646 HVQIYTKKLVRSDKFKTGMEQYVNKELEK--EDTRSIIIGRLPVMVKSELCWTSESEKRD 819
++IYT+KLV SDKFKTG +QYV+KE + D R + IGRLPVMV S+LCW + +KRD
Sbjct: 157 SLEIYTQKLVSSDKFKTGKDQYVDKEPVEGASDNRDVFIGRLPVMVNSDLCWMKDGQKRD 216
Query: 820 CDFDHGGYFIVKGAEKTFIAQEQICLRRLWLSSSPTWMVAYRPAEKRKRVYLKLVDTPRF 999
C+FD GGYF++KGAEK FIAQEQICLRRLW+S+ W VAYR KR R+ ++LV+ +
Sbjct: 217 CEFDRGGYFLIKGAEKIFIAQEQICLRRLWISNVQGWTVAYRSEVKRNRLIIRLVENSKS 276
Query: 1000 ENLGGGEKTLSVYFVVTEMPVWILFFALGASSDKEVVNLIDLDIEDTKIVNTLVASI--Y 1173
E+L EK L+VYF+ TE+PVWILFFALG SSDKE+V+LID +D ++N L AS+
Sbjct: 277 EDLKSKEKVLNVYFLSTEVPVWILFFALGVSSDKEIVDLIDYGRDDPTVLNILFASVREV 336
Query: 1174 DADKNCDGFRKGKNALNHIEKLLKNCKFPPTESVEECIQNFLFPNLKGFKQKARFLGYMV 1353
D D FR+GK AL ++ ++ FPP + +E+C+ +LF +LKG KQK FLGYMV
Sbjct: 337 DNDDKWKDFRRGKRALTFLDNEIRKTSFPPADKIEDCLNLYLFASLKGSKQKCHFLGYMV 396
Query: 1354 KCLLEAYTGRRKMDNRDDFRNKXXXXXXXXXXXXXKVHLKHAERRMIKAMQRDLYGDRDL 1533
KCLL+AYTGRRK DNRDDFRNK KVH+ HA RRM KA+QRDLYGDR +
Sbjct: 397 KCLLQAYTGRRKCDNRDDFRNKRFELAAELLERELKVHIAHARRRMEKALQRDLYGDRQV 456
Query: 1534 QQIENYLDASIVTNGLSRAFSTGAWCHPYKRMERVSGVVATLRRTNPLQMTADMRKTRQQ 1713
IE+YLDASI+TNGLSRAFSTGAW H +KRMER+SGVVATL R NPLQ A++R+TRQQ
Sbjct: 457 HPIEHYLDASIITNGLSRAFSTGAWAHAFKRMERISGVVATLGRANPLQTMAELRRTRQQ 516
Query: 1714 VSYTGRVGDARYPHPSHWGKICFLSTPDGENCGLVKNLASLGLVSTTNLEPLLDKLYDCG 1893
V+YTG+VGDARYPHPSHWG++CFLSTPDGENCGL+KNL+ GLVS + + L+ CG
Sbjct: 517 VAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNLSGTGLVSLNTKKSITPTLFRCG 576
Query: 1894 MNELVDDTSSVLLGEHKIFLDGDWVGMCQDSESFVEQLRNMRRSNEVPHQVEIKMDREHR 2073
M LVD+TS+ G+++IFLDG+WVG+C+DS SFV +R RR N HQVE+K D + +
Sbjct: 577 MENLVDNTSTSFCGKYRIFLDGEWVGVCEDSLSFVTNVRRKRRRNPFLHQVEVKRDEQLK 636
Query: 2074 EIRIFSDAGRILRPLLVVENLKKIKALKGGDLSFQFLLDRXXXXXXXXXXXXDCVTAWGI 2253
E+RIFSDAGRILRPLLVVENL +I KG + +FQ LLD+ DC AW I
Sbjct: 637 EVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRVAWSI 696
Query: 2254 GYLLNADKENPRRRYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFST 2433
+L+ ++ +Y+HCELDMSFLLGLSCG++P+ANHDHARR L+QS+KHS QAIGFS
Sbjct: 697 KHLM---EDEGTTKYSHCELDMSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSP 753
Query: 2434 TNPNIRIDTNIHQLYYPQRPLFRTVLSECLGKSTY-TRQKGMLPRPEYYNGQCAIVAVNV 2610
TN N R+DT HQL+YPQRPLFRT+ ++CLG Y + G+LP+PE+YNGQ AIVAVNV
Sbjct: 754 TNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHAGILPKPEFYNGQNAIVAVNV 813
Query: 2611 HLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDSTEASGKKSKPEDSITFGKLQSKIG 2790
HLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVD+ E+S K+ K +D+I FGK QSKIG
Sbjct: 814 HLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIG 873
Query: 2791 RVDSLDDDGFPYIGANLQTGDIVIGKYTESGTDHSVKLKHTERGMVQKVIRSANDEGKNF 2970
RVDSLDDDGFPYIGANLQ+GDIVIG+ ESG DHS+KLKHTE+GMVQKV+ S+ND+GKN+
Sbjct: 874 RVDSLDDDGFPYIGANLQSGDIVIGRCAESGADHSIKLKHTEKGMVQKVVLSSNDDGKNY 933
Query: 2971 AVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTREGIVPDIVINPHAFPSRQTP 3150
AVVSLRQVR+PCLGDKFSSMHGQKGVLGFLESQENFPFT +GIVPDIVINPHAFPSRQTP
Sbjct: 934 AVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTP 993
Query: 3151 AQLLEAALGKGIAAGGVLKYATPFAALSVEAITQQLKSCGFSRWGNERVYNGRTGEMIHS 3330
QLLEAALGKGIAAGG LKYATPF+ SV+AIT QL GFSRWG+ERVYNGRTGEM+ S
Sbjct: 994 GQLLEAALGKGIAAGGSLKYATPFSTPSVDAITDQLHRAGFSRWGSERVYNGRTGEMMRS 1053
Query: 3331 LVFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA 3510
L+FMGPTFYQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA
Sbjct: 1054 LIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA 1113
Query: 3511 AANLHERLFTLSDCSQIHICRKCKSMANVIQRSVLGGRKIRGPYCRICESTEDIVRASVP 3690
+ANLHERLFTLSD SQ+H+C+KCK++A+VIQRSV GGRK+RGPYCR+CES +DIVR +VP
Sbjct: 1114 SANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKMRGPYCRVCESFDDIVRVNVP 1173
Query: 3691 YGAKLLAQELFSMNISLKFETEVC 3762
YGAKLL QELFSM I+LKFET++C
Sbjct: 1174 YGAKLLCQELFSMGINLKFETQLC 1197
>ref|XP_003523670.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Glycine max]
Length = 1205
Score = 1642 bits (4252), Expect = 0.0
Identities = 801/1167 (68%), Positives = 950/1167 (81%), Gaps = 6/1167 (0%)
Frame = +1
Query: 280 LGELGEDFLKKFCKKTAVAFFEQYGLISHQINSFNDFIKYGLQKVFDSVGEIIIEPGYDP 459
L ELGED +K +CKK ++ FF++YGLISHQINSFN F+ GLQ FDS G++++ PG+DP
Sbjct: 46 LEELGEDMVKYWCKKASMLFFDEYGLISHQINSFNHFVAIGLQNTFDSFGDLVVTPGFDP 105
Query: 460 SKRGDGD-WRYASLKFGKVHVERPKIWSGDKFTTDGGVEFMNMLPRHARLQNMTYAGRML 636
SK+G+ + +RYAS+KFGKV +++P W G+ G + MLPRHAR+Q MTYA ++
Sbjct: 106 SKKGENEHFRYASVKFGKVKLDKPMFWGGE-----GNAQEFKMLPRHARIQRMTYASKVK 160
Query: 637 VETHVQIYTKKLVRSDKFKTGMEQYVNKELEKEDTRSIIIGRLPVMVKSELCWTSESEKR 816
++ VQ+Y K VRSDKFKTG E+++++E+ KED R IIIGRLPVMVKS+LCW ++EK
Sbjct: 161 IQVKVQVYVPKKVRSDKFKTGKEEFLDREIMKEDEREIIIGRLPVMVKSDLCWMKDAEKD 220
Query: 817 DCDFDHGGYFIVKGAEKTFIAQEQICLRRLWLSSSPTWMVAYRPAEKRKRVYLKLVDTPR 996
D +FDHGGYFIVKGAEKTFIAQEQ+ L+RLW+ +SP WM+AY+ KR R+ +KLV R
Sbjct: 221 DDEFDHGGYFIVKGAEKTFIAQEQLYLKRLWVMNSPGWMIAYKSQMKRNRMVIKLVGNSR 280
Query: 997 FENLGGGEKTLSVYFVVTEMPVWILFFALGASSDKEVVNLIDLDIEDTKIVNTLVASIYD 1176
E + G+ L+VYF+ E+PVW+LFFALG SSDKE+V+LI +D +I N L AS+ D
Sbjct: 281 SEEVENGDMCLTVYFLSVEVPVWVLFFALGVSSDKEIVDLIGCGNDDVRIQNILFASVRD 340
Query: 1177 ADKNCDGFRKGKNALNHIEKLLKNCKFPPTESVEECIQNFLFPNLKGFKQKARFLGYMVK 1356
AD+ C FR+ +NA+ ++EK +K+ +FPP+ES++EC++ ++FP + G +KARFL YMVK
Sbjct: 341 ADEKCGAFRRVRNAVQYLEKCVKSVQFPPSESMQECLEMYVFPGISGLNRKARFLAYMVK 400
Query: 1357 CLLEAYTGRRKMDNRDDFRNKXXXXXXXXXXXXXKVHLKHAERRMIKAMQRDLYGDRDLQ 1536
LL AYTGRRK DNRDDFRNK KVH+ HA +RM KA+QRDLYGDRD++
Sbjct: 401 GLLLAYTGRRKCDNRDDFRNKRLELASELLDRELKVHVAHARKRMAKALQRDLYGDRDVR 460
Query: 1537 QIENYLDASIVTNGLSRAFSTGAWCHPYKRMERVSGVVATLRRTNPLQMTADMRKTRQQV 1716
IE+YLDASI+TNGL RAFSTGAW HPYKRMER+SGVVA + RTNPLQ A++R+ RQQV
Sbjct: 461 PIEHYLDASIITNGLQRAFSTGAWSHPYKRMERISGVVANVGRTNPLQTMAELRRARQQV 520
Query: 1717 SYTGRVGDARYPHPSHWGKICFLSTPDGENCGLVKNLASLGLVST--TNL-EPLLDKLYD 1887
YTG+VGDARYPHPSHWGK+CFL+TPDGENCGLVKNL+ GLVST T++ E +L KL D
Sbjct: 521 QYTGKVGDARYPHPSHWGKVCFLTTPDGENCGLVKNLSVTGLVSTDVTDVTESILLKLVD 580
Query: 1888 CGMNELVDDTSSVLLGEHKIFLDGDWVGMCQDSESFVEQLRNMRRSNEVPHQVEIKMDRE 2067
CGM ELVDDTS+ L K+ L+GDWVG+C DS SFV +LR+ RR NE+PHQVEIK D+
Sbjct: 581 CGMQELVDDTSTHLGSMDKVLLNGDWVGVCPDSSSFVAELRSRRRRNELPHQVEIKRDQS 640
Query: 2068 HREIRIFSDAGRILRPLLVVENLKKIKALKGGDLSFQFLLDRXXXXXXXXXXXXDCVTAW 2247
E+RI+SDAGRILRPLLVV NL KIK K SFQ LLD+ DC TAW
Sbjct: 641 QHEVRIYSDAGRILRPLLVVGNLLKIKGFKSDRYSFQSLLDKGVIELIGPEEEEDCCTAW 700
Query: 2248 GIGYLLNADKENPRR-RYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIG 2424
G+ YL KE R +YTHCELDMSFLLGLSC ++P+ANHDHARRVLYQS+KHS QAIG
Sbjct: 701 GVEYLFG--KEGKRSVKYTHCELDMSFLLGLSCSLVPFANHDHARRVLYQSQKHSSQAIG 758
Query: 2425 FSTTNPNIRIDTNIHQLYYPQRPLFRTVLSECLGKSTYTR-QKGMLPRPEYYNGQCAIVA 2601
FSTTNPNIR+DT HQL+YPQ+PLFRT+ S+CLGK ++ Q + P+ E+YNGQ AIVA
Sbjct: 759 FSTTNPNIRVDTLSHQLHYPQKPLFRTMTSDCLGKPDHSLGQSKIPPKAEFYNGQNAIVA 818
Query: 2602 VNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDSTEASGKKSKPEDSITFGKLQS 2781
VNVHLGYNQEDSLVMNRASL+RGMFRSEHIRSYK+E+D+ E+S KK KPED + F KLQS
Sbjct: 819 VNVHLGYNQEDSLVMNRASLQRGMFRSEHIRSYKSEIDNKESSDKKRKPEDIVNFAKLQS 878
Query: 2782 KIGRVDSLDDDGFPYIGANLQTGDIVIGKYTESGTDHSVKLKHTERGMVQKVIRSANDEG 2961
KIGRVDSLDDDGFPY+GANLQ+GDI+IGK ESG D+SVKLKHTERG VQKV+ S+NDEG
Sbjct: 879 KIGRVDSLDDDGFPYVGANLQSGDIIIGKCAESGADNSVKLKHTERGYVQKVVLSSNDEG 938
Query: 2962 KNFAVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTREGIVPDIVINPHAFPSR 3141
KNFAVVSLRQVR+P LGDKFSSMHGQKGVLGFLESQENFPFTR+GIVPDIVINPHAFPSR
Sbjct: 939 KNFAVVSLRQVRSPVLGDKFSSMHGQKGVLGFLESQENFPFTRQGIVPDIVINPHAFPSR 998
Query: 3142 QTPAQLLEAALGKGIAAGGVLKYATPFAALSVEAITQQLKSCGFSRWGNERVYNGRTGEM 3321
QTP QLLEAALGKGIA GG+LK ATPF+ SV+AIT+QL GFSRWGNERVYNGRTGEM
Sbjct: 999 QTPGQLLEAALGKGIACGGILKQATPFSTPSVDAITEQLHRAGFSRWGNERVYNGRTGEM 1058
Query: 3322 IHSLVFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIA 3501
+ SL+FMGPTFYQRL HM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIA
Sbjct: 1059 VRSLIFMGPTFYQRLHHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIA 1118
Query: 3502 HGAAANLHERLFTLSDCSQIHICRKCKSMANVIQRSVLGGRKIRGPYCRICESTEDIVRA 3681
HGA+ANL+ERLFTLSD SQIHIC KCK +ANVI R V GGRKIRGPYCR CES +DIV A
Sbjct: 1119 HGASANLYERLFTLSDSSQIHICSKCKKVANVILRPVSGGRKIRGPYCRHCESADDIVVA 1178
Query: 3682 SVPYGAKLLAQELFSMNISLKFETEVC 3762
VPYGAKLL QELFSM I+LKFET++C
Sbjct: 1179 HVPYGAKLLCQELFSMGINLKFETQLC 1205
>ref|XP_003527775.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Glycine max]
Length = 1205
Score = 1639 bits (4245), Expect = 0.0
Identities = 800/1170 (68%), Positives = 948/1170 (81%), Gaps = 9/1170 (0%)
Frame = +1
Query: 280 LGELGEDFLKKFCKKTAVAFFEQYGLISHQINSFNDFIKYGLQKVFDSVGEIIIEPGYDP 459
L ELGED +K +CKK ++ FF +YGLISHQINSFN FI GLQK F+S G++++ PG+DP
Sbjct: 43 LEELGEDIVKYWCKKASMLFFNEYGLISHQINSFNHFIHTGLQKTFESFGDLVVTPGFDP 102
Query: 460 SKRGDGD-WRYASLKFGKVHVERPKIWSGDKFTTDGGVEFMNMLPRHARLQNMTYAGRML 636
SK+G+ + +RYAS+KFG V +++P W G+ G + MLPRHAR+Q MTYA ++
Sbjct: 103 SKKGENEHFRYASVKFGNVKLDKPMFWGGE-----GNAQEFKMLPRHARIQRMTYASKVK 157
Query: 637 VETHVQIYTKKLVRSDKFKTGMEQYVNKELEKEDTRSIIIGRLPVMVKSELCWTSESEKR 816
++ VQ+Y K VRSDKFKTG +++++E+ KED R IIIGRLPVMVKS+LCW E+EK
Sbjct: 158 IQVKVQVYVPKKVRSDKFKTGKAEFLDREVMKEDEREIIIGRLPVMVKSDLCWMKEAEKE 217
Query: 817 DCDFDHGGYFIVKGAEKTFIAQEQICLRRLWLSSSPTWMVAYRPAEKRKRVYLKLVDTPR 996
D +FDHGGYFIVKGAEKTFIAQEQ+ L+RLW+ +SP WM+AY+ KR R+ +KLV R
Sbjct: 218 DDEFDHGGYFIVKGAEKTFIAQEQLYLKRLWVMNSPGWMIAYKSQMKRNRMVIKLVGNSR 277
Query: 997 FENLGGGEKTLSVYFVVTEMPVWILFFALGASSDKEVVNLIDLDIEDTKIVNTLVASIYD 1176
E + G+ +L+VYF+ E+PVW+LFFALG SSDKE+V+LI +D +I N L AS+ D
Sbjct: 278 GEEVENGDMSLAVYFLSVEVPVWVLFFALGVSSDKEIVDLIGCGNDDVRIQNILFASVRD 337
Query: 1177 ADKNCDGFRKGKNALNHIEKLLKNCKFPPTESVEECIQNFLFPNLKGFKQKARFLGYMVK 1356
AD+ C FR+G++A+ ++EK +K+ +FPP+ES++EC++ ++FP + G +KARFL YMVK
Sbjct: 338 ADEKCGAFRRGRHAVQYLEKCVKSVQFPPSESMQECLEMYVFPGISGLNRKARFLAYMVK 397
Query: 1357 CLLEAYTGRRKMDNRDDFRNKXXXXXXXXXXXXXKVHLKHAERRMIKAMQRDLYGDRDLQ 1536
LL AYTGRRK DNRDDFRNK KVH+ HA +RM KA+QRDLYGDRD++
Sbjct: 398 GLLLAYTGRRKCDNRDDFRNKRLELASELLDRELKVHIAHARKRMAKALQRDLYGDRDVR 457
Query: 1537 QIENYLDASIVTNGLSRAFSTGAWCHPYKRMERVSGVVATLRRTNPLQMTADMRKTRQQV 1716
IE+YLDASI+TNGL RAFSTGAW HPYKRMER+SGVVA + RTNPLQ A++R+ RQQV
Sbjct: 458 PIEHYLDASIITNGLQRAFSTGAWSHPYKRMERISGVVANVGRTNPLQTMAELRRARQQV 517
Query: 1717 SYTGRVGDARYPHPSHWGKICFLSTPDGENCGLVKNLASLGLVST---TNLEPLLDKLYD 1887
YTG+VGDARYPHPSHWGK+CFLSTPDGENCGLVKNLA GLVST E +L KL D
Sbjct: 518 QYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAVTGLVSTDVSAVSEYILPKLLD 577
Query: 1888 CGMNELVDDTSSVLLGEHKIFLDGDWVGMCQDSESFVEQLRNMRRSNEVPHQVEIKMDRE 2067
CGM ELVDDTS+ L + K+ L+GDWVG+C DS SFV +LR+ RR NE+PHQVEIK D+
Sbjct: 578 CGMEELVDDTSTHLGNKDKVLLNGDWVGVCPDSSSFVAELRSRRRRNELPHQVEIKRDQS 637
Query: 2068 HREIRIFSDAGRILRPLLVVENLKKIKALKGGDLSFQFLLDRXXXXXXXXXXXXDCVTAW 2247
E+RI+SDAGRILRPLLVV NL KIK K SFQ LLD+ DC TAW
Sbjct: 638 QHEVRIYSDAGRILRPLLVVGNLLKIKGFKSDCNSFQSLLDKGVIELIGPEEEEDCCTAW 697
Query: 2248 GIGYLLNADKENPRR-RYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIG 2424
G+ YL KE R +YTHCELDMSFLLGLSC ++P+ANHDHARRVLYQS+KHS QAIG
Sbjct: 698 GVEYLFG--KEGKRSVKYTHCELDMSFLLGLSCSLVPFANHDHARRVLYQSQKHSSQAIG 755
Query: 2425 FSTTNPNIRIDTNIHQLYYPQRPLFRTVLSECLGKSTYTRQKGML----PRPEYYNGQCA 2592
FSTTNPNIR+DT HQL+YPQ+PLFRT+ S+CLGK + + + P+ E+YNGQ A
Sbjct: 756 FSTTNPNIRVDTLSHQLHYPQKPLFRTMASDCLGKPDNSLGQNKISKIPPKAEFYNGQNA 815
Query: 2593 IVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDSTEASGKKSKPEDSITFGK 2772
IVAVNVHLGYNQEDSLVMNRASL+RGMFRSEHIRSYK+E+D+ E+S KK KPED + F K
Sbjct: 816 IVAVNVHLGYNQEDSLVMNRASLQRGMFRSEHIRSYKSEIDNKESSDKKRKPEDIVNFAK 875
Query: 2773 LQSKIGRVDSLDDDGFPYIGANLQTGDIVIGKYTESGTDHSVKLKHTERGMVQKVIRSAN 2952
LQSKIGRVDSLDDDGFPY+GANLQ+GDI+IGK ESG D+SVKLKHTERG VQKV+ S+N
Sbjct: 876 LQSKIGRVDSLDDDGFPYVGANLQSGDIIIGKGAESGADNSVKLKHTERGYVQKVVLSSN 935
Query: 2953 DEGKNFAVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTREGIVPDIVINPHAF 3132
DEGKNFAVVSLRQVR+P LGDKFSSMHGQKGVLGFLESQENFPFTR+GIVPDIVINPHAF
Sbjct: 936 DEGKNFAVVSLRQVRSPVLGDKFSSMHGQKGVLGFLESQENFPFTRQGIVPDIVINPHAF 995
Query: 3133 PSRQTPAQLLEAALGKGIAAGGVLKYATPFAALSVEAITQQLKSCGFSRWGNERVYNGRT 3312
PSRQTP QLLEAALGKGIA GG+L+ ATPF+ SV+AIT+QL GFSRWGNERVYNGRT
Sbjct: 996 PSRQTPGQLLEAALGKGIACGGILRQATPFSTPSVDAITEQLHRAGFSRWGNERVYNGRT 1055
Query: 3313 GEMIHSLVFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDC 3492
GEM+ SL+FMGPTFYQRL HM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDC
Sbjct: 1056 GEMVRSLIFMGPTFYQRLHHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDC 1115
Query: 3493 LIAHGAAANLHERLFTLSDCSQIHICRKCKSMANVIQRSVLGGRKIRGPYCRICESTEDI 3672
LIAHGA+ANL+ERLFTLSD SQIHIC KCK++ANVI R V GGRKIRGPYCR CES +DI
Sbjct: 1116 LIAHGASANLYERLFTLSDSSQIHICSKCKNVANVILRPVSGGRKIRGPYCRHCESADDI 1175
Query: 3673 VRASVPYGAKLLAQELFSMNISLKFETEVC 3762
V A VPYGAKLL QELFSM I+LKFET++C
Sbjct: 1176 VVAHVPYGAKLLCQELFSMGINLKFETQLC 1205
>ref|XP_004288915.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Fragaria
vesca subsp. vesca]
Length = 1201
Score = 1633 bits (4228), Expect = 0.0
Identities = 792/1162 (68%), Positives = 937/1162 (80%), Gaps = 1/1162 (0%)
Frame = +1
Query: 280 LGELGEDFLKKFCKKTAVAFFEQYGLISHQINSFNDFIKYGLQKVFDSVGEIIIEPGYDP 459
L +LGE FL +FCK+ +V+FF++YGL+SHQINS+NDF++ G+Q+VFDS GEI++EP +DP
Sbjct: 46 LHDLGEVFLDEFCKEASVSFFKEYGLLSHQINSYNDFVENGIQRVFDSFGEIVVEPNFDP 105
Query: 460 SKRGDGDWRYASLKFGKVHVERPKIWSGDKFTTDGGVEFMNMLPRHARLQNMTYAGRMLV 639
SK+G+ DWR+A++KFGKV + +P W G +D E+ NMLPRHARLQNMTY+ RM V
Sbjct: 106 SKKGNADWRFAAIKFGKVTLSKPCFWGG----SDSDKEY-NMLPRHARLQNMTYSARMSV 160
Query: 640 ETHVQIYTKKLVRSDKFKTGMEQYVNKELEKEDTRSIIIGRLPVMVKSELCWTSESEKRD 819
VQ+YT+ LV SDKFKTG EQ + K D+R IIIGR+PVMVKS LCW EK D
Sbjct: 161 NITVQVYTQNLVESDKFKTGTEQLLEKTTLSTDSRDIIIGRIPVMVKSNLCWMKGVEKGD 220
Query: 820 CDFDHGGYFIVKGAEKTFIAQEQICLRRLWLSSSPTWMVAYRPAEKRKRVYLKLVDTPRF 999
C+FD GGYFI+ GAEKTFIAQEQ CL+RL +++S VAYR KR R+ ++L +
Sbjct: 221 CEFDQGGYFIINGAEKTFIAQEQSCLKRLLITNSQGLTVAYRSEVKRHRLIIRLSGISKL 280
Query: 1000 ENLGGGEKTLSVYFVVTEMPVWILFFALGASSDKEVVNLIDLDIEDTKIVNTLVASIYDA 1179
EN+ G EK LSVYF+ TE+PVWI FFALG SSDKEV++LID IED I N L ASI DA
Sbjct: 281 ENVEGVEKVLSVYFMSTEIPVWIWFFALGVSSDKEVIDLIDYGIEDASISNILFASIRDA 340
Query: 1180 DKNCDGFRKGKNALNHIEKLLKNCKFPPTESVEECIQNFLFPNLKGFKQKARFLGYMVKC 1359
D+ D FR+G NAL ++E +K+ FPP ESVE+CI +LFPN++G KQKARFLGYMVKC
Sbjct: 341 DERKDDFRRGNNALRYVENAIKSTTFPPGESVEDCISMYLFPNMRGLKQKARFLGYMVKC 400
Query: 1360 LLEAYTGRRKMDNRDDFRNKXXXXXXXXXXXXXKVHLKHAERRMIKAMQRDLYGDRDLQQ 1539
LL+ G RK DNRDDFRNK K H+ HA R+M KA+QRDL GD ++
Sbjct: 401 LLQTSIGLRKCDNRDDFRNKRLELAGELLERELKAHVSHARRKMAKALQRDLGGDHVVRP 460
Query: 1540 IENYLDASIVTNGLSRAFSTGAWCHPYKRMERVSGVVATLRRTNPLQMTADMRKTRQQVS 1719
+E+YLDASIVTNG+SRAFSTGAWCHP+KRMER+SGVVA + R NPLQ DMRKTRQQV
Sbjct: 461 VEHYLDASIVTNGVSRAFSTGAWCHPFKRMERISGVVANIGRANPLQTMIDMRKTRQQVQ 520
Query: 1720 YTGRVGDARYPHPSHWGKICFLSTPDGENCGLVKNLASLGLVSTTNLEPLLDKLYDCGMN 1899
YTG+ GDARYPHPSHWGK+CFLSTPDGENCGLVKNLA+ LVS EP+L KL+ CG+
Sbjct: 521 YTGKAGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTALVSINISEPILPKLFKCGIE 580
Query: 1900 ELVDDTSSVLLGEHKIFLDGDWVGMCQDSESFVEQLRNMRRSNEVPHQVEIKMDREHREI 2079
ELVDDT + L G+HK+FL+GDWVG+C DS FV +LR +RRS ++PHQVEIK D E+
Sbjct: 581 ELVDDTYTSLAGKHKVFLNGDWVGICVDSHGFVTKLRRLRRSKKLPHQVEIKRDEHKGEV 640
Query: 2080 RIFSDAGRILRPLLVVENLKKIKALKGGDLSFQFLLDRXXXXXXXXXXXXDCVTAWGIGY 2259
RIFSDAGRILRPLLVV+ LKKIKA KG +FQ LD+ DC TAW I Y
Sbjct: 641 RIFSDAGRILRPLLVVQGLKKIKAAKGEKHTFQDFLDKGIIEFIGAEEEEDCRTAWAIKY 700
Query: 2260 LLNADKENPRRRYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTN 2439
L +++ +YTHCELDMSFLLGLSCGIIP+ANHDHARRVLYQS+KHSQQAIG+STTN
Sbjct: 701 LF-MEEQGSVVKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSQQAIGYSTTN 759
Query: 2440 PNIRIDTNIHQLYYPQRPLFRTVLSECLGKSTY-TRQKGMLPRPEYYNGQCAIVAVNVHL 2616
PN+R+DT H L+YPQRPLFRT++++ LGK Y G +P+PEY+NGQ AIVAVNVHL
Sbjct: 760 PNLRVDTLSHNLHYPQRPLFRTMIADSLGKPGYPVGHNGFMPKPEYFNGQNAIVAVNVHL 819
Query: 2617 GYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDSTEASGKKSKPEDSITFGKLQSKIGRV 2796
GYNQEDS+VMNRASLERGMFRSEHIRSYKAEV++ + K+ KP++ + FGK+QSK GRV
Sbjct: 820 GYNQEDSIVMNRASLERGMFRSEHIRSYKAEVENKLSLEKRRKPDECVNFGKIQSKFGRV 879
Query: 2797 DSLDDDGFPYIGANLQTGDIVIGKYTESGTDHSVKLKHTERGMVQKVIRSANDEGKNFAV 2976
D+LDDDGFP +GA+LQ+GDI+IG+ +ESGTDHS+KLKHTERGMVQKV+ S+ND GKNFAV
Sbjct: 880 DNLDDDGFPCVGASLQSGDIIIGRCSESGTDHSIKLKHTERGMVQKVVLSSNDAGKNFAV 939
Query: 2977 VSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTREGIVPDIVINPHAFPSRQTPAQ 3156
VSLRQVR+P LGDKFSSMHGQKGVLGFLE QENFPFT +GIVPDIVINPHAFPSRQTP Q
Sbjct: 940 VSLRQVRSPSLGDKFSSMHGQKGVLGFLEYQENFPFTIQGIVPDIVINPHAFPSRQTPGQ 999
Query: 3157 LLEAALGKGIAAGGVLKYATPFAALSVEAITQQLKSCGFSRWGNERVYNGRTGEMIHSLV 3336
LLEAALGKGIA GG +YATPF+ LSV+ IT QL GFSRWGNERVYNGRTGEM+ L+
Sbjct: 1000 LLEAALGKGIACGGSKRYATPFSTLSVDDITDQLHRAGFSRWGNERVYNGRTGEMVRQLI 1059
Query: 3337 FMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAA 3516
FMGPTFYQRL HM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA+A
Sbjct: 1060 FMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASA 1119
Query: 3517 NLHERLFTLSDCSQIHICRKCKSMANVIQRSVLGGRKIRGPYCRICESTEDIVRASVPYG 3696
NLHERLFTLSD S +++C+KC++ ANVI+R + GGRKIRGPYCR+C+S +DIVR +VPYG
Sbjct: 1120 NLHERLFTLSDSSLMNVCQKCQNAANVIERKLTGGRKIRGPYCRVCDSADDIVRVNVPYG 1179
Query: 3697 AKLLAQELFSMNISLKFETEVC 3762
AKLL QELFSM ISLKFET +C
Sbjct: 1180 AKLLCQELFSMGISLKFETRLC 1201
>gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhododendron macrophyllum]
Length = 1019
Score = 1620 bits (4196), Expect = 0.0
Identities = 785/1019 (77%), Positives = 881/1019 (86%), Gaps = 1/1019 (0%)
Frame = +1
Query: 706 QYVNKELEKEDTRSIIIGRLPVMVKSELCWTSESEKRDCDFDHGGYFIVKGAEKTFIAQE 885
QYV+K+ ED R +IIGR+PVM+KS+LCW + EK DCDFDHGGYF++KGAEKTFIAQE
Sbjct: 1 QYVDKDPISEDNRDVIIGRIPVMLKSDLCWMNGVEKSDCDFDHGGYFLIKGAEKTFIAQE 60
Query: 886 QICLRRLWLSSSPTWMVAYRPAEKRKRVYLKLVDTPRFENLGGGEKTLSVYFVVTEMPVW 1065
QICL+RLW+S+SP+W VAYR KRKRVY+KL + P+ E++ GGEK LSVYF E P+W
Sbjct: 61 QICLKRLWVSNSPSWTVAYRDVSKRKRVYIKL-EPPKREHIRGGEKVLSVYFSAVEFPIW 119
Query: 1066 ILFFALGASSDKEVVNLIDLDIEDTKIVNTLVASIYDADKNCDGFRKGKNALNHIEKLLK 1245
ILFFALGASSDKEVVNLID D ED++IVN L+ASIYDAD+NC GFR+G+NA+N I K ++
Sbjct: 120 ILFFALGASSDKEVVNLIDCDGEDSRIVNVLIASIYDADENCKGFRRGRNAINDIMKKIE 179
Query: 1246 NCKFPPTESVEECIQNFLFPNLKGFKQKARFLGYMVKCLLEAYTGRRKMDNRDDFRNKXX 1425
NCKFPP ES+E + N+LFPNL GF+QKARFLGYMVKCLL+AYTGRRK+DNRDDFRNK
Sbjct: 180 NCKFPPQESIEAFLSNYLFPNLSGFRQKARFLGYMVKCLLQAYTGRRKIDNRDDFRNKRL 239
Query: 1426 XXXXXXXXXXXKVHLKHAERRMIKAMQRDLYGDRDLQQIENYLDASIVTNGLSRAFSTGA 1605
+VH+KHAERRM+KAMQRDLYG+R + IE+YLDASI+TNGLSRAFSTGA
Sbjct: 240 ELAGELLERELRVHVKHAERRMVKAMQRDLYGERVIHAIEHYLDASIITNGLSRAFSTGA 299
Query: 1606 WCHPYKRMERVSGVVATLRRTNPLQMTADMRKTRQQVSYTGRVGDARYPHPSHWGKICFL 1785
W HPYK+MER+SGVVATLRRTNPLQ ADMRKTRQQVSYTG+VGDARYPHPSHWGKICFL
Sbjct: 300 WSHPYKKMERISGVVATLRRTNPLQTIADMRKTRQQVSYTGKVGDARYPHPSHWGKICFL 359
Query: 1786 STPDGENCGLVKNLASLGLVSTTNLEPLLDKLYDCGMNELVDDTSSVLLGEHKIFLDGDW 1965
STPDGENCGLVKNLA GLVST E LDKL D GM +LVDDTS++L G+ K+FLDG+W
Sbjct: 360 STPDGENCGLVKNLAITGLVSTNIEEHFLDKLLDSGMEKLVDDTSTLLSGKVKVFLDGNW 419
Query: 1966 VGMCQDSESFVEQLRNMRRSNEVPHQVEIKMDREHREIRIFSDAGRILRPLLVVENLKKI 2145
VG+C DS SFV LR RR EVPHQVEIK D +HRE+R+FSDAGRILRPLLVVENL KI
Sbjct: 420 VGVCGDSVSFVAALRRKRRRKEVPHQVEIKRDEQHREVRVFSDAGRILRPLLVVENLGKI 479
Query: 2146 KALKGGDLSFQFLLDRXXXXXXXXXXXXDCVTAWGIGYLLNADKENPRRRYTHCELDMSF 2325
KA KGGD SFQ LLD+ DC TAWGI YL ++ +YTHCELDMSF
Sbjct: 480 KASKGGDYSFQSLLDKGVIEFIGTEEEEDCRTAWGINYLFMENEAKATVKYTHCELDMSF 539
Query: 2326 LLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPNIRIDTNIHQLYYPQRPLFRT 2505
LLGLS IIP+ANHDHARRVLYQSEKHSQQA+GF+TTNPNIR+DTN HQLYYPQRPLFRT
Sbjct: 540 LLGLSAAIIPFANHDHARRVLYQSEKHSQQAMGFNTTNPNIRVDTNTHQLYYPQRPLFRT 599
Query: 2506 VLSECLGKSTY-TRQKGMLPRPEYYNGQCAIVAVNVHLGYNQEDSLVMNRASLERGMFRS 2682
++S+CLGK Y G++PR EY+NGQCAIVAVNVHLGYNQEDSLVMNRASLERGMFRS
Sbjct: 600 MVSDCLGKPGYPLGHNGIVPRAEYFNGQCAIVAVNVHLGYNQEDSLVMNRASLERGMFRS 659
Query: 2683 EHIRSYKAEVDSTEASGKKSKPEDSITFGKLQSKIGRVDSLDDDGFPYIGANLQTGDIVI 2862
EHIRSYKA+VD+ E+ GKK K EDS+ FGK+QSKIGRVDSLDDDGFP+IGANLQ GDIV+
Sbjct: 660 EHIRSYKADVDNKESVGKKPKFEDSVNFGKVQSKIGRVDSLDDDGFPFIGANLQNGDIVV 719
Query: 2863 GKYTESGTDHSVKLKHTERGMVQKVIRSANDEGKNFAVVSLRQVRTPCLGDKFSSMHGQK 3042
G+ ESG DHS+KLKHTERGMVQKV+ SANDEGKNFAVVSLRQVRTPCLGDKFSSMHGQK
Sbjct: 720 GRCAESGADHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRTPCLGDKFSSMHGQK 779
Query: 3043 GVLGFLESQENFPFTREGIVPDIVINPHAFPSRQTPAQLLEAALGKGIAAGGVLKYATPF 3222
GVLGFLESQENFPFT +GIVPDIV+NPHAFPSRQTP QLLEAALGKGIA GG+ KYATPF
Sbjct: 780 GVLGFLESQENFPFTIQGIVPDIVVNPHAFPSRQTPGQLLEAALGKGIACGGLQKYATPF 839
Query: 3223 AALSVEAITQQLKSCGFSRWGNERVYNGRTGEMIHSLVFMGPTFYQRLTHMAEDKVKFRN 3402
+ LSV+A+T QL GFSRWG+ERVYNGRTGEMIHSLVFMGPTFYQRLTHM+EDKVKFRN
Sbjct: 840 STLSVDAVTDQLHRAGFSRWGSERVYNGRTGEMIHSLVFMGPTFYQRLTHMSEDKVKFRN 899
Query: 3403 TGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDCSQIHICRKCK 3582
TGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSD SQ+HICRKC
Sbjct: 900 TGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCN 959
Query: 3583 SMANVIQRSVLGGRKIRGPYCRICESTEDIVRASVPYGAKLLAQELFSMNISLKFETEV 3759
++ANVIQR+V GGRKIRGPYCR CES E+IVR +VPYGAKLLAQELFSM I++KF+TE+
Sbjct: 960 NIANVIQRAVPGGRKIRGPYCRFCESVEEIVRVNVPYGAKLLAQELFSMGITMKFDTEL 1018
>gb|EXB86677.1| DNA-directed RNA polymerase D subunit 2a [Morus notabilis]
Length = 1196
Score = 1620 bits (4195), Expect = 0.0
Identities = 787/1162 (67%), Positives = 937/1162 (80%), Gaps = 3/1162 (0%)
Frame = +1
Query: 286 ELGEDFLKKFCKKTAVAFFEQYGLISHQINSFNDFIKYGLQKVFDSVGEIIIEPGYDPSK 465
ELGE FL+ FCK+ + +FF +YGLISHQINS+NDFI+ G+QKVFDS G++I+EPGYDPSK
Sbjct: 42 ELGEVFLQNFCKEASTSFFSEYGLISHQINSYNDFIRNGVQKVFDSFGDLIVEPGYDPSK 101
Query: 466 RGDGDWRYASLKFGKVHVERPKIWSGDKFTTDGGVEFMNMLPRHARLQNMTYAGRMLVET 645
+ +WRYA ++FGKV ++ P W G D E+ N+LPRHARLQNMTY+ RM V
Sbjct: 102 KRQNEWRYALVRFGKVTLDLPSFWGG----ADKDKEY-NLLPRHARLQNMTYSSRMKVNV 156
Query: 646 HVQIYTKKLVRSDKFKTGMEQYVNKELEKEDTRSIIIGRLPVMVKSELCWTSESEKRDCD 825
H+++YT+KLVRSDKFKTG EQ+++KE+ + + ++IGR+PVMVKS+LCW ++EK DC
Sbjct: 157 HIEVYTQKLVRSDKFKTGKEQFLDKEIISTEDKDVMIGRIPVMVKSDLCWMKDAEKGDCY 216
Query: 826 FDHGGYFIVKGAEKTFIAQEQICLRRLWLSSSPTWMVAYRPAEKRKRVYLKLVDTPRFEN 1005
FDHGGYFI+KGAEKTFIAQEQIC +RLW++S VAY+ KR R+ L+L + E+
Sbjct: 217 FDHGGYFIIKGAEKTFIAQEQICRKRLWITSHQNLTVAYQSEVKRNRLILRLAQSG-LED 275
Query: 1006 LGGGEKTLSVYFVVTEMPVWILFFALGASSDKEVVNLIDLDIEDTKIVNTLVASIYDADK 1185
+ L VYF+ TE+PVWILFFALG SSDKEVV+LID +D I+N L SI +D+
Sbjct: 276 TTVEKDVLCVYFLSTEIPVWILFFALGVSSDKEVVDLIDFPTDDASILNILFPSIQISDE 335
Query: 1186 NCDGFRKGKNALNHIEKLLKNCKFPPTESVEECIQNFLFPNLKGFKQKARFLGYMVKCLL 1365
C GFR+ K AL +EK +K +FPP ES EEC+ FLFPNL+G QKARFLGYMVKCLL
Sbjct: 336 VCAGFRRQKKALGFVEKHIKKTQFPPRESAEECLDMFLFPNLRGMLQKARFLGYMVKCLL 395
Query: 1366 EAYTGRRKMDNRDDFRNKXXXXXXXXXXXXXKVHLKHAERRMIKAMQRDLYGDRDLQQIE 1545
+A+TGRRK +N+DDFRNK + + HA +R KA+QRDLYGD+ L+QIE
Sbjct: 396 QAFTGRRKCNNKDDFRNKRLDLAGELLERELRAQVSHARKRTAKALQRDLYGDKGLRQIE 455
Query: 1546 NYLDASIVTNGLSRAFSTGAWCHPYKRMERVSGVVATLRRTNPLQMTADMRKTRQQVSYT 1725
YLDASIVTNGLSRAFSTGAWCHP+K+ ER+SGVVA + RTNPLQ DMRKTRQQV YT
Sbjct: 456 FYLDASIVTNGLSRAFSTGAWCHPFKKTERISGVVANVGRTNPLQTVVDMRKTRQQVQYT 515
Query: 1726 GRVGDARYPHPSHWGKICFLSTPDGENCGLVKNLASLGLVSTTNLEPLLDKLYDCGMNEL 1905
G+VGDARYPHPSHWGK+CFLSTPDGENCGLVKNLA+ GLVS E L+ L D GM L
Sbjct: 516 GKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAATGLVSINIAESLISTLCDSGMENL 575
Query: 1906 VDDTSSVLLGEHKIFLDGDWVGMCQDSESFVEQLRNMRRSNEVPHQVEIKMDREHREIRI 2085
+DT + L +HK+FL+GDW+G+C DS +FV +LR RR NE+PHQVEIK D +H E+RI
Sbjct: 576 ANDTYTPLHEKHKVFLNGDWIGVCADSLAFVTELRRKRRRNELPHQVEIKRDEQHGEVRI 635
Query: 2086 FSDAGRILRPLLVVENLKKIKALKGGDLSFQFLLDRXXXXXXXXXXXXDCVTAWGIGYLL 2265
FSD+GRILRPLLVVENL +IK K G +F LLD+ DC TAWGI YL
Sbjct: 636 FSDSGRILRPLLVVENLNRIKPSKEGKYTFHSLLDKGIIELIGAEEEEDCRTAWGIKYLF 695
Query: 2266 NADKENPRRRYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPN 2445
D P YTHCELDMSFLL +SCGIIP+ANHDHARRVLYQ++KHSQQAIGF TTNP+
Sbjct: 696 MEDGGKP-VNYTHCELDMSFLLSVSCGIIPFANHDHARRVLYQAQKHSQQAIGFPTTNPD 754
Query: 2446 IRIDTNIHQLYYPQRPLFRTVLSECLGKSTYT-RQKGMLPRPEYYNGQCAIVAVNVHLGY 2622
IR+DT HQL+YPQRPLF+T+ S+CLGK Y Q G +P+ E +NGQ AIVAVNVHLGY
Sbjct: 755 IRVDTLSHQLHYPQRPLFQTMTSDCLGKRGYAPSQNGFIPKFECFNGQNAIVAVNVHLGY 814
Query: 2623 NQEDSLVMNRASLERGMFRSEHIRSYKAEVDSTEASGKKSKPEDSITFGKLQSKIGRVDS 2802
NQEDS+VMNRASLERGMFRSEHIRSYKA+VD+ E++ K+ KP+D F K+ SK GRVDS
Sbjct: 815 NQEDSIVMNRASLERGMFRSEHIRSYKADVDNKESTDKRRKPDDCFNFAKIPSKNGRVDS 874
Query: 2803 LDDDGFPYIGANLQTGDIVIGKYTESGTDHSVKLKHTERGMVQKVIRSANDEGKNFAVVS 2982
LDDDGFP+IGANLQ+GDIVIG+ ESG DHS+KLKHTE+GMVQKV+ S+ND+GKNFAVVS
Sbjct: 875 LDDDGFPFIGANLQSGDIVIGRCAESGADHSIKLKHTEKGMVQKVVLSSNDDGKNFAVVS 934
Query: 2983 LRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTREGIVPDIVINPHAFPSRQTPAQLL 3162
LRQVR P LGDKFSSMHGQKGVLG+LESQENFPFT +GIVPDIVINPHAFPSRQTP QLL
Sbjct: 935 LRQVRQPILGDKFSSMHGQKGVLGYLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLL 994
Query: 3163 EAALGKGIA-AGGV-LKYATPFAALSVEAITQQLKSCGFSRWGNERVYNGRTGEMIHSLV 3336
EAALGKGIA A G+ L++ATPF+ SV+AIT+QL GFSRWGNERVYNGRTGEM+ SL+
Sbjct: 995 EAALGKGIALAKGIPLRHATPFSTPSVDAITEQLHKAGFSRWGNERVYNGRTGEMVRSLI 1054
Query: 3337 FMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAA 3516
FMGPTFYQRL HM+EDKVKFRNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGA+A
Sbjct: 1055 FMGPTFYQRLVHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASA 1114
Query: 3517 NLHERLFTLSDCSQIHICRKCKSMANVIQRSVLGGRKIRGPYCRICESTEDIVRASVPYG 3696
NLHERLFTLSD SQ+HIC +C ++AN+IQRS++GGRK+RGPYCRIC+S +DIVR +VPYG
Sbjct: 1115 NLHERLFTLSDSSQMHICHRCHNVANIIQRSLMGGRKVRGPYCRICKSADDIVRVNVPYG 1174
Query: 3697 AKLLAQELFSMNISLKFETEVC 3762
AKLL QELF+M I+LKFET +C
Sbjct: 1175 AKLLCQELFTMGINLKFETRIC 1196