BLASTX nr result
ID: Catharanthus22_contig00009962
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00009962
(874 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006579388.1| PREDICTED: uncharacterized protein LOC100527... 256 8e-66
ref|NP_001237937.1| uncharacterized protein LOC100499661 [Glycin... 256 8e-66
gb|ESW06234.1| hypothetical protein PHAVU_010G030200g [Phaseolus... 256 1e-65
ref|XP_006428010.1| hypothetical protein CICLE_v10026735mg [Citr... 256 1e-65
ref|NP_001238073.1| uncharacterized protein LOC100527316 [Glycin... 254 2e-65
gb|AFK35928.1| unknown [Lotus japonicus] 254 3e-65
ref|XP_004509486.1| PREDICTED: DNA-directed RNA polymerase II su... 253 6e-65
ref|XP_002307132.1| hypothetical protein POPTR_0005s08690g [Popu... 253 6e-65
ref|XP_002282413.1| PREDICTED: DNA-directed RNA polymerase II su... 252 1e-64
ref|NP_001236224.1| uncharacterized protein LOC100527704 [Glycin... 251 2e-64
ref|XP_003626907.1| DNA-directed RNA polymerase II subunit RPB4 ... 251 2e-64
ref|XP_006288864.1| hypothetical protein CARUB_v10002229mg [Caps... 251 3e-64
ref|XP_002871392.1| RPB15.9 [Arabidopsis lyrata subsp. lyrata] g... 250 4e-64
ref|NP_196554.1| RNA polymerase II, Rpb4, core protein [Arabidop... 250 5e-64
gb|EPS68209.1| hypothetical protein M569_06563 [Genlisea aurea] 249 9e-64
ref|XP_006361114.1| PREDICTED: DNA-directed RNA polymerase II su... 249 1e-63
gb|EOX92292.1| RNA polymerase II, Rpb4, core protein isoform 1 [... 249 1e-63
ref|XP_004241362.1| PREDICTED: DNA-directed RNA polymerase II su... 248 2e-63
ref|XP_002522014.1| DNA-directed RNA polymerase II, putative [Ri... 248 2e-63
ref|XP_004138390.1| PREDICTED: DNA-directed RNA polymerase II su... 246 6e-63
>ref|XP_006579388.1| PREDICTED: uncharacterized protein LOC100527704 isoform X1 [Glycine
max]
Length = 138
Score = 256 bits (654), Expect = 8e-66
Identities = 127/138 (92%), Positives = 135/138 (97%)
Frame = +3
Query: 129 MSAEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQMSQVFEKSLH 308
MS EEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQ+SQVFEKSL
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQVSQVFEKSLQ 60
Query: 309 YVKRFSRYKNPDSVRQVREILSRHQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 488
YVKRFSRYKNPD+VRQVREIL+R++LAEFELCVLGNLCPETVEEAIAMVPSIK+RGRA D
Sbjct: 61 YVKRFSRYKNPDAVRQVREILARYELAEFELCVLGNLCPETVEEAIAMVPSIKSRGRAQD 120
Query: 489 DEAIEKMLNDLSLVKQFE 542
DEAIEKMLNDLSL+K+FE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>ref|NP_001237937.1| uncharacterized protein LOC100499661 [Glycine max]
gi|255625623|gb|ACU13156.1| unknown [Glycine max]
Length = 138
Score = 256 bits (654), Expect = 8e-66
Identities = 127/138 (92%), Positives = 135/138 (97%)
Frame = +3
Query: 129 MSAEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQMSQVFEKSLH 308
MS EEEENAAELKIGDEFLKAKCLMNCEV+LILEHKYEQLQQTSDDPMNQ+SQVFEKSL
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQISQVFEKSLQ 60
Query: 309 YVKRFSRYKNPDSVRQVREILSRHQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 488
YVKRFSRYKNPD+VRQVREIL+R+QLAEFELCVLGNLCPETVEEAIAMVPSIK+RGRA D
Sbjct: 61 YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKSRGRAQD 120
Query: 489 DEAIEKMLNDLSLVKQFE 542
DEAIEKMLNDLSL+K+FE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>gb|ESW06234.1| hypothetical protein PHAVU_010G030200g [Phaseolus vulgaris]
Length = 138
Score = 256 bits (653), Expect = 1e-65
Identities = 127/138 (92%), Positives = 134/138 (97%)
Frame = +3
Query: 129 MSAEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQMSQVFEKSLH 308
MS EEEENAAELKIGDEFLKAKCLMNCEV+LILEHKYEQLQQTSDDPMNQ+SQVFEKSL
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQVSQVFEKSLQ 60
Query: 309 YVKRFSRYKNPDSVRQVREILSRHQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 488
YVKRFSRYKNPD+VRQVREIL+R+QLAEFELCVLGNLCPETVEEAIAMVPSIK RGRA D
Sbjct: 61 YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQD 120
Query: 489 DEAIEKMLNDLSLVKQFE 542
DEAIEKMLNDLSL+K+FE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>ref|XP_006428010.1| hypothetical protein CICLE_v10026735mg [Citrus clementina]
gi|568884040|ref|XP_006494738.1| PREDICTED: DNA-directed
RNA polymerase II subunit 4-like isoform X2 [Citrus
sinensis] gi|557530000|gb|ESR41250.1| hypothetical
protein CICLE_v10026735mg [Citrus clementina]
Length = 138
Score = 256 bits (653), Expect = 1e-65
Identities = 127/138 (92%), Positives = 134/138 (97%)
Frame = +3
Query: 129 MSAEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQMSQVFEKSLH 308
MS EEEENAAELKIGDEFLKAKCLMNCEVA+IL+HKYEQLQQTSDDPMNQ+SQVFEKSL
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVAIILDHKYEQLQQTSDDPMNQVSQVFEKSLQ 60
Query: 309 YVKRFSRYKNPDSVRQVREILSRHQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 488
YVKRFSRYKNPD+VRQVREILSR+QLAEFELCVLGNLCPETVEEAIAMVPSIK RGRA D
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHD 120
Query: 489 DEAIEKMLNDLSLVKQFE 542
DEAIEKMLNDLSL+K+FE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>ref|NP_001238073.1| uncharacterized protein LOC100527316 [Glycine max]
gi|255632071|gb|ACU16388.1| unknown [Glycine max]
Length = 138
Score = 254 bits (650), Expect = 2e-65
Identities = 126/138 (91%), Positives = 135/138 (97%)
Frame = +3
Query: 129 MSAEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQMSQVFEKSLH 308
MS EEEENAAELKIGDEFLKAKCLMNCEV+LILEHKYEQLQQTSDDPMNQ+SQVFEKSL
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQVSQVFEKSLQ 60
Query: 309 YVKRFSRYKNPDSVRQVREILSRHQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 488
YVKRFSRYKNPD+VRQVREIL+R+QLAEFELCVLGNLCPETVEEAIA+VPSIK+RGRA D
Sbjct: 61 YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAVVPSIKSRGRAQD 120
Query: 489 DEAIEKMLNDLSLVKQFE 542
DEAIEKMLNDLSL+K+FE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>gb|AFK35928.1| unknown [Lotus japonicus]
Length = 138
Score = 254 bits (649), Expect = 3e-65
Identities = 126/138 (91%), Positives = 134/138 (97%)
Frame = +3
Query: 129 MSAEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQMSQVFEKSLH 308
MS EEEENAAELKIGDEFLKAKCLMNCEV+LILEHKYEQLQQ+SDDPMNQ+SQVFEKSL
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQSSDDPMNQVSQVFEKSLQ 60
Query: 309 YVKRFSRYKNPDSVRQVREILSRHQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 488
YVKRFSRYKNPD+VRQVREIL+R+QLAEFELCVLGNLCPETVEEAIAMVPSIK RGRA D
Sbjct: 61 YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQD 120
Query: 489 DEAIEKMLNDLSLVKQFE 542
DEAIEKMLNDLSL+K+FE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>ref|XP_004509486.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4-like [Cicer
arietinum] gi|502155876|ref|XP_004510223.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB4-like [Cicer
arietinum]
Length = 138
Score = 253 bits (646), Expect = 6e-65
Identities = 125/138 (90%), Positives = 134/138 (97%)
Frame = +3
Query: 129 MSAEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQMSQVFEKSLH 308
MS EEEENAAELKIGDEFLKAKCLMNCEV+LIL+HKYEQLQQ+SDDPMNQ+SQVFEKSL
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILDHKYEQLQQSSDDPMNQVSQVFEKSLQ 60
Query: 309 YVKRFSRYKNPDSVRQVREILSRHQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 488
YVKRFSRYKNPD+VRQVREIL+R+QLAEFELCVLGNLCPETVEEAIAMVPSIK RGRA D
Sbjct: 61 YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQD 120
Query: 489 DEAIEKMLNDLSLVKQFE 542
DEAIEKMLNDLSL+K+FE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>ref|XP_002307132.1| hypothetical protein POPTR_0005s08690g [Populus trichocarpa]
gi|224096326|ref|XP_002310604.1| hypothetical protein
POPTR_0007s06660g [Populus trichocarpa]
gi|222853507|gb|EEE91054.1| hypothetical protein
POPTR_0007s06660g [Populus trichocarpa]
gi|222856581|gb|EEE94128.1| hypothetical protein
POPTR_0005s08690g [Populus trichocarpa]
Length = 138
Score = 253 bits (646), Expect = 6e-65
Identities = 126/138 (91%), Positives = 133/138 (96%)
Frame = +3
Query: 129 MSAEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQMSQVFEKSLH 308
MS EEEENAAELKIGD+FLKAKCLMNCEVALILEHKYEQLQQ SDDPMNQ+SQVFEKSL
Sbjct: 1 MSGEEEENAAELKIGDDFLKAKCLMNCEVALILEHKYEQLQQMSDDPMNQVSQVFEKSLQ 60
Query: 309 YVKRFSRYKNPDSVRQVREILSRHQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 488
YVKRFSRYKNPD+VRQVREILSR+QLAEFELCVLGNLCPETVEEAIAMVPSIK +GRA D
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHD 120
Query: 489 DEAIEKMLNDLSLVKQFE 542
DEAIEKMLNDLSL+K+FE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>ref|XP_002282413.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4 [Vitis
vinifera] gi|147856183|emb|CAN80281.1| hypothetical
protein VITISV_017448 [Vitis vinifera]
gi|302143481|emb|CBI22042.3| unnamed protein product
[Vitis vinifera]
Length = 138
Score = 252 bits (643), Expect = 1e-64
Identities = 125/138 (90%), Positives = 133/138 (96%)
Frame = +3
Query: 129 MSAEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQMSQVFEKSLH 308
MS EEEENAAELKIGDEFLKAKCLMNCEVA+ILEHKYEQLQQ SDDP+NQ+SQVFEKSL
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVAVILEHKYEQLQQMSDDPLNQVSQVFEKSLQ 60
Query: 309 YVKRFSRYKNPDSVRQVREILSRHQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 488
YVKRFSRYKNPD+VRQVREILSR+QLAEFELCVLGNLCPETVEEAIAMVPSIK +GRA D
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHD 120
Query: 489 DEAIEKMLNDLSLVKQFE 542
DEAIEKMLNDLSL+K+FE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>ref|NP_001236224.1| uncharacterized protein LOC100527704 [Glycine max]
gi|255632992|gb|ACU16850.1| unknown [Glycine max]
Length = 195
Score = 251 bits (642), Expect = 2e-64
Identities = 125/135 (92%), Positives = 132/135 (97%)
Frame = +3
Query: 129 MSAEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQMSQVFEKSLH 308
MS EEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQ+SQVFEKSL
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQVSQVFEKSLQ 60
Query: 309 YVKRFSRYKNPDSVRQVREILSRHQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 488
YVKRFSRYKNPD+VRQVREIL+R++LAEFELCVLGNLCPETVEEAIAMVPSIK+RGRA D
Sbjct: 61 YVKRFSRYKNPDAVRQVREILARYELAEFELCVLGNLCPETVEEAIAMVPSIKSRGRAQD 120
Query: 489 DEAIEKMLNDLSLVK 533
DEAIEKMLNDLSL+K
Sbjct: 121 DEAIEKMLNDLSLIK 135
>ref|XP_003626907.1| DNA-directed RNA polymerase II subunit RPB4 [Medicago truncatula]
gi|355520929|gb|AET01383.1| DNA-directed RNA polymerase
II subunit RPB4 [Medicago truncatula]
gi|388497296|gb|AFK36714.1| unknown [Medicago
truncatula]
Length = 138
Score = 251 bits (641), Expect = 2e-64
Identities = 125/138 (90%), Positives = 133/138 (96%)
Frame = +3
Query: 129 MSAEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQMSQVFEKSLH 308
MS EEEENAAELKIGDEFLKAKCLMNCEV+LILEHKYEQLQQ+SDD MNQ+SQVFEKSL
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQSSDDAMNQVSQVFEKSLQ 60
Query: 309 YVKRFSRYKNPDSVRQVREILSRHQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 488
YVKRFSRYKNPD+VRQVREIL+R+QLAEFELCVLGNLCPETVEEAIAMVPSIK RGRA D
Sbjct: 61 YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQD 120
Query: 489 DEAIEKMLNDLSLVKQFE 542
DEAIEKMLNDLSL+K+FE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>ref|XP_006288864.1| hypothetical protein CARUB_v10002229mg [Capsella rubella]
gi|482557570|gb|EOA21762.1| hypothetical protein
CARUB_v10002229mg [Capsella rubella]
Length = 138
Score = 251 bits (640), Expect = 3e-64
Identities = 123/138 (89%), Positives = 132/138 (95%)
Frame = +3
Query: 129 MSAEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQMSQVFEKSLH 308
MS EEEENAAELKIGDEFLKAKCLMNCEV+LILEHKYEQLQQ S+DPMNQ+SQVFEKSL
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQVSEDPMNQVSQVFEKSLQ 60
Query: 309 YVKRFSRYKNPDSVRQVREILSRHQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 488
YVKRFSRYKNPD+VRQVREILSRHQL EFELCVLGNLCPETVEEA+AMVPS+K +GRA D
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRHQLTEFELCVLGNLCPETVEEAVAMVPSLKTKGRAHD 120
Query: 489 DEAIEKMLNDLSLVKQFE 542
D+AIEKMLNDLSLVK+FE
Sbjct: 121 DDAIEKMLNDLSLVKRFE 138
>ref|XP_002871392.1| RPB15.9 [Arabidopsis lyrata subsp. lyrata]
gi|297317229|gb|EFH47651.1| RPB15.9 [Arabidopsis lyrata
subsp. lyrata]
Length = 138
Score = 250 bits (639), Expect = 4e-64
Identities = 123/138 (89%), Positives = 132/138 (95%)
Frame = +3
Query: 129 MSAEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQMSQVFEKSLH 308
MS EEEENAAELKIGDEFLKAKCLMNCEV+LILEHK+EQLQQ S+DPMNQ+SQVFEKSL
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKFEQLQQVSEDPMNQVSQVFEKSLQ 60
Query: 309 YVKRFSRYKNPDSVRQVREILSRHQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 488
YVKRFSRYKNPD+VRQVREILSRHQL EFELCVLGNLCPETVEEA+AMVPS+K +GRA D
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRHQLTEFELCVLGNLCPETVEEAVAMVPSLKTKGRAHD 120
Query: 489 DEAIEKMLNDLSLVKQFE 542
DEAIEKMLNDLSLVK+FE
Sbjct: 121 DEAIEKMLNDLSLVKRFE 138
>ref|NP_196554.1| RNA polymerase II, Rpb4, core protein [Arabidopsis thaliana]
gi|75098524|sp|O48890.1|NRPB4_ARATH RecName:
Full=DNA-directed RNA polymerase II subunit 4; AltName:
Full=15.9 kDa subunit of RNA polymerase II; AltName:
Full=DNA-directed RNA polymerase II subunit D
gi|2760362|gb|AAB95261.1| 15.9 kDa subunit of RNA
polymerase II [Arabidopsis thaliana]
gi|9758970|dbj|BAB09413.1| 15.9 kDa subunit of RNA
polymerase II [Arabidopsis thaliana]
gi|21554212|gb|AAM63291.1| 15.9 kDa subunit of RNA
polymerase II [Arabidopsis thaliana]
gi|98960869|gb|ABF58918.1| At5g09920 [Arabidopsis
thaliana] gi|222423668|dbj|BAH19801.1| AT5G09920
[Arabidopsis thaliana] gi|332004084|gb|AED91467.1| RNA
polymerase II, Rpb4, core protein [Arabidopsis thaliana]
Length = 138
Score = 250 bits (638), Expect = 5e-64
Identities = 123/138 (89%), Positives = 132/138 (95%)
Frame = +3
Query: 129 MSAEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQMSQVFEKSLH 308
MS EEEENAAELKIGDEFLKAKCLMNCEV+LILEHK+EQLQQ S+DPMNQ+SQVFEKSL
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKFEQLQQISEDPMNQVSQVFEKSLQ 60
Query: 309 YVKRFSRYKNPDSVRQVREILSRHQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 488
YVKRFSRYKNPD+VRQVREILSRHQL EFELCVLGNLCPETVEEA+AMVPS+K +GRA D
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRHQLTEFELCVLGNLCPETVEEAVAMVPSLKTKGRAHD 120
Query: 489 DEAIEKMLNDLSLVKQFE 542
DEAIEKMLNDLSLVK+FE
Sbjct: 121 DEAIEKMLNDLSLVKRFE 138
>gb|EPS68209.1| hypothetical protein M569_06563 [Genlisea aurea]
Length = 138
Score = 249 bits (636), Expect = 9e-64
Identities = 125/138 (90%), Positives = 132/138 (95%)
Frame = +3
Query: 129 MSAEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQMSQVFEKSLH 308
MS EEENAAELKI DEFLKAKCLMNCEVALILEHKYEQLQQT+DDPMNQMSQVFEKS
Sbjct: 1 MSTGEEENAAELKIPDEFLKAKCLMNCEVALILEHKYEQLQQTADDPMNQMSQVFEKSHQ 60
Query: 309 YVKRFSRYKNPDSVRQVREILSRHQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 488
YVKRFSRYKNPD+VRQVREILSR+QLAEFELCVLGNLCPETVEEAI+MVPSIK +GRALD
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAISMVPSIKAKGRALD 120
Query: 489 DEAIEKMLNDLSLVKQFE 542
DEAIEKMLNDLSL+K+FE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>ref|XP_006361114.1| PREDICTED: DNA-directed RNA polymerase II subunit 4-like [Solanum
tuberosum]
Length = 138
Score = 249 bits (635), Expect = 1e-63
Identities = 124/138 (89%), Positives = 130/138 (94%)
Frame = +3
Query: 129 MSAEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQMSQVFEKSLH 308
MS EEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQ SDDP NQ+SQVFEKSL
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 60
Query: 309 YVKRFSRYKNPDSVRQVREILSRHQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 488
YVKRFSRYKNPD+VRQ REILSR+ LAEFELCVLGNLCPETVEE IAMVPSIKNRGRALD
Sbjct: 61 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIKNRGRALD 120
Query: 489 DEAIEKMLNDLSLVKQFE 542
+EAIEKML DLSL+K+FE
Sbjct: 121 EEAIEKMLTDLSLIKKFE 138
>gb|EOX92292.1| RNA polymerase II, Rpb4, core protein isoform 1 [Theobroma cacao]
gi|508700397|gb|EOX92293.1| RNA polymerase II, Rpb4,
core protein isoform 1 [Theobroma cacao]
Length = 138
Score = 249 bits (635), Expect = 1e-63
Identities = 123/138 (89%), Positives = 133/138 (96%)
Frame = +3
Query: 129 MSAEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQMSQVFEKSLH 308
MS EEEENAAELKIG+EFLKAKCLMNCEVALILEHKYEQLQQ S+DPMNQ+SQVFEKSL
Sbjct: 1 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILEHKYEQLQQMSEDPMNQVSQVFEKSLQ 60
Query: 309 YVKRFSRYKNPDSVRQVREILSRHQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 488
YVKRFSRYKNPD+VRQVREILSR+QLAEFELCVLGNLCPETVEEAIAMVPSIK +GRA D
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHD 120
Query: 489 DEAIEKMLNDLSLVKQFE 542
D+AIE+MLNDLSL+K+FE
Sbjct: 121 DDAIERMLNDLSLIKKFE 138
>ref|XP_004241362.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4-like
[Solanum lycopersicum]
Length = 138
Score = 248 bits (633), Expect = 2e-63
Identities = 123/138 (89%), Positives = 130/138 (94%)
Frame = +3
Query: 129 MSAEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQMSQVFEKSLH 308
MS EEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQ+QQ SDDP NQ+SQVFEKSL
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQIQQMSDDPTNQISQVFEKSLQ 60
Query: 309 YVKRFSRYKNPDSVRQVREILSRHQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 488
YVKRFSRYKNPD+VRQ REILSR+ LAEFELCVLGNLCPETVEE IAMVPSIKNRGRALD
Sbjct: 61 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIKNRGRALD 120
Query: 489 DEAIEKMLNDLSLVKQFE 542
+EAIEKML DLSL+K+FE
Sbjct: 121 EEAIEKMLTDLSLIKKFE 138
>ref|XP_002522014.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
gi|223538818|gb|EEF40418.1| DNA-directed RNA polymerase
II, putative [Ricinus communis]
Length = 138
Score = 248 bits (633), Expect = 2e-63
Identities = 123/138 (89%), Positives = 132/138 (95%)
Frame = +3
Query: 129 MSAEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQMSQVFEKSLH 308
MS EEEENA+ELKIGDEFLKAKCLMNCEVALILEHKYEQLQQ S+DPMNQ+SQVFEKSL
Sbjct: 1 MSGEEEENASELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSNDPMNQVSQVFEKSLQ 60
Query: 309 YVKRFSRYKNPDSVRQVREILSRHQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 488
YVKRFSRYKNPD+VRQVREILSR+QLAEFELCVLGNLCPETVEEAIAMVPSIK +GRA D
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHD 120
Query: 489 DEAIEKMLNDLSLVKQFE 542
DEAIEKML DLS++K+FE
Sbjct: 121 DEAIEKMLTDLSMIKKFE 138
>ref|XP_004138390.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4-like
[Cucumis sativus] gi|449526195|ref|XP_004170099.1|
PREDICTED: DNA-directed RNA polymerase II subunit
RPB4-like [Cucumis sativus]
Length = 138
Score = 246 bits (629), Expect = 6e-63
Identities = 121/138 (87%), Positives = 131/138 (94%)
Frame = +3
Query: 129 MSAEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQMSQVFEKSLH 308
MS EEEENAAELKIGDEFLKAKCLMNCEV+LILEHKYEQLQQ S+DP NQ+SQVFEKSL
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQ 60
Query: 309 YVKRFSRYKNPDSVRQVREILSRHQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 488
YVKRFSRYKNPD+VRQVRE+LSR+QLAEFELCVLGNLCPETVEEAIAMVPS+K +GR D
Sbjct: 61 YVKRFSRYKNPDAVRQVREVLSRYQLAEFELCVLGNLCPETVEEAIAMVPSLKTKGRVHD 120
Query: 489 DEAIEKMLNDLSLVKQFE 542
DEAIEKMLNDLSL+K+FE
Sbjct: 121 DEAIEKMLNDLSLIKRFE 138