BLASTX nr result

ID: Catharanthus22_contig00009960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00009960
         (393 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006355890.1| PREDICTED: photosystem II reaction center PS...    56   6e-06
gb|EMJ02588.1| hypothetical protein PRUPE_ppa012196mg [Prunus pe...    55   7e-06

>ref|XP_006355890.1| PREDICTED: photosystem II reaction center PSB28 protein,
           chloroplastic-like [Solanum tuberosum]
          Length = 180

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 35/69 (50%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
 Frame = -3

Query: 205 MATLQSLAFSTPISRCPSHHRSIAGLASGAIN-CARSSFNGQPLLLSHSQFSTIKQKCRA 29
           MATLQSLAFS  +S      RS+ G+AS  ++  A SSFNGQ L LS S+FST  +  + 
Sbjct: 1   MATLQSLAFSPALSHTSHQPRSLLGIASRIVHQSAGSSFNGQRLCLSRSRFSTNIKNQKM 60

Query: 28  GGLTIMMVK 2
             L IMMV+
Sbjct: 61  SRLCIMMVQ 69


>gb|EMJ02588.1| hypothetical protein PRUPE_ppa012196mg [Prunus persica]
          Length = 180

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
 Frame = -3

Query: 205 MATLQSLAFSTPISRCPSHHRSIAGLASGAIN-CARSSFNGQPLLLSHSQFSTIKQKCRA 29
           MATLQSLAFS+P+S C    R  +GL S  ++  A+S+FNGQ L +S  Q++ I++  +A
Sbjct: 1   MATLQSLAFSSPVSHCLQQPRLHSGLLSWTVHRSAKSTFNGQSLHVSRPQWAPIRRCTQA 60

Query: 28  GGLTIMMVK 2
                MMVK
Sbjct: 61  SRSITMMVK 69


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