BLASTX nr result
ID: Catharanthus22_contig00009909
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00009909
(636 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003633774.1| PREDICTED: uncharacterized protein LOC100853... 71 3e-10
emb|CBI21228.3| unnamed protein product [Vitis vinifera] 71 3e-10
ref|NP_001177024.1| Os12g0577100 [Oryza sativa Japonica Group] g... 64 4e-08
gb|EEE53482.1| hypothetical protein OsJ_36631 [Oryza sativa Japo... 64 4e-08
gb|EEC69559.1| hypothetical protein OsI_38857 [Oryza sativa Indi... 64 4e-08
ref|XP_002442379.1| hypothetical protein SORBIDRAFT_08g019140 [S... 64 5e-08
ref|XP_003579258.1| PREDICTED: uncharacterized protein LOC100834... 62 1e-07
ref|XP_006837089.1| hypothetical protein AMTR_s00110p00107430 [A... 62 2e-07
tpg|DAA47174.1| TPA: hypothetical protein ZEAMMB73_366443 [Zea m... 61 2e-07
gb|ACF86800.2| unknown [Zea mays] gi|414868619|tpg|DAA47176.1| T... 61 2e-07
ref|NP_001130787.1| uncharacterized protein LOC100191891 [Zea ma... 61 2e-07
ref|XP_006664137.1| PREDICTED: uncharacterized protein LOC102706... 61 3e-07
ref|XP_006664136.1| PREDICTED: uncharacterized protein LOC102706... 61 3e-07
gb|EMT11921.1| Heterogeneous nuclear ribonucleoprotein A1 [Aegil... 60 4e-07
ref|XP_006338380.1| PREDICTED: uncharacterized protein LOC102589... 59 1e-06
ref|XP_004232173.1| PREDICTED: uncharacterized protein LOC101263... 59 1e-06
ref|XP_004962982.1| PREDICTED: polyadenylate-binding protein, cy... 59 2e-06
ref|XP_004962981.1| PREDICTED: polyadenylate-binding protein, cy... 59 2e-06
gb|EMS53186.1| Heterogeneous nuclear ribonucleoprotein A1 [Triti... 57 6e-06
>ref|XP_003633774.1| PREDICTED: uncharacterized protein LOC100853981 [Vitis vinifera]
Length = 787
Score = 70.9 bits (172), Expect = 3e-10
Identities = 31/50 (62%), Positives = 40/50 (80%)
Frame = +3
Query: 198 RSDASPQMGASIESRPARPQMRFDPFTGQPYKFDPFTGEPIIPDDLPRRS 347
R++ P++ A+ + PARPQMRFDPFTG+PYKFDPFTGEPI PD + +S
Sbjct: 734 RAELDPRLIATSVAPPARPQMRFDPFTGEPYKFDPFTGEPIEPDGVRSQS 783
>emb|CBI21228.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 70.9 bits (172), Expect = 3e-10
Identities = 31/50 (62%), Positives = 40/50 (80%)
Frame = +3
Query: 198 RSDASPQMGASIESRPARPQMRFDPFTGQPYKFDPFTGEPIIPDDLPRRS 347
R++ P++ A+ + PARPQMRFDPFTG+PYKFDPFTGEPI PD + +S
Sbjct: 480 RAELDPRLIATSVAPPARPQMRFDPFTGEPYKFDPFTGEPIEPDGVRSQS 529
>ref|NP_001177024.1| Os12g0577100 [Oryza sativa Japonica Group]
gi|77556261|gb|ABA99057.1| RNA recognition motif family
protein, expressed [Oryza sativa Japonica Group]
gi|255670425|dbj|BAH95752.1| Os12g0577100 [Oryza sativa
Japonica Group]
Length = 414
Score = 63.9 bits (154), Expect = 4e-08
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = +3
Query: 225 ASIESRPARPQMRFDPFTGQPYKFDPFTGEPIIPDDLPRRS 347
+S E AR Q+RFDPFTG+PYKFDP+TGEPI P+ PRRS
Sbjct: 370 SSAEYSTARQQVRFDPFTGEPYKFDPYTGEPIRPESNPRRS 410
>gb|EEE53482.1| hypothetical protein OsJ_36631 [Oryza sativa Japonica Group]
Length = 401
Score = 63.9 bits (154), Expect = 4e-08
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = +3
Query: 225 ASIESRPARPQMRFDPFTGQPYKFDPFTGEPIIPDDLPRRS 347
+S E AR Q+RFDPFTG+PYKFDP+TGEPI P+ PRRS
Sbjct: 357 SSAEYSTARQQVRFDPFTGEPYKFDPYTGEPIRPESNPRRS 397
>gb|EEC69559.1| hypothetical protein OsI_38857 [Oryza sativa Indica Group]
Length = 378
Score = 63.9 bits (154), Expect = 4e-08
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = +3
Query: 225 ASIESRPARPQMRFDPFTGQPYKFDPFTGEPIIPDDLPRRS 347
+S E AR Q+RFDPFTG+PYKFDP+TGEPI P+ PRRS
Sbjct: 334 SSAEYSTARQQVRFDPFTGEPYKFDPYTGEPIRPESNPRRS 374
>ref|XP_002442379.1| hypothetical protein SORBIDRAFT_08g019140 [Sorghum bicolor]
gi|241943072|gb|EES16217.1| hypothetical protein
SORBIDRAFT_08g019140 [Sorghum bicolor]
Length = 441
Score = 63.5 bits (153), Expect = 5e-08
Identities = 35/69 (50%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Frame = +3
Query: 147 ERLNLSPVKFRRS--QPQLRSDASPQMGASIESRPARPQMRFDPFTGQPYKFDPFTGEPI 320
ER L P + ++ L SD + A + R Q+RFDPFTG+PYKFDPFTGEPI
Sbjct: 371 ERRFLPPAGYNKAGYNTDLGSDFCSRSPAEYSAE--RQQVRFDPFTGEPYKFDPFTGEPI 428
Query: 321 IPDDLPRRS 347
PD PRRS
Sbjct: 429 RPDPNPRRS 437
>ref|XP_003579258.1| PREDICTED: uncharacterized protein LOC100834061 [Brachypodium
distachyon]
Length = 668
Score = 62.4 bits (150), Expect = 1e-07
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +3
Query: 225 ASIESRPARPQMRFDPFTGQPYKFDPFTGEPIIPDDLPRRS 347
+S E QMRFDPFTG+PYKFDPFTGEPI P+ PRRS
Sbjct: 611 SSAEYSTEHQQMRFDPFTGEPYKFDPFTGEPIRPEPNPRRS 651
>ref|XP_006837089.1| hypothetical protein AMTR_s00110p00107430 [Amborella trichopoda]
gi|548839682|gb|ERM99942.1| hypothetical protein
AMTR_s00110p00107430 [Amborella trichopoda]
Length = 674
Score = 61.6 bits (148), Expect = 2e-07
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = +3
Query: 249 RPQMRFDPFTGQPYKFDPFTGEPIIPDDLPRRS 347
+PQ++FDPFTG PYKFDPFTGEPI PD PRR+
Sbjct: 638 QPQVKFDPFTGTPYKFDPFTGEPIQPDPAPRRA 670
>tpg|DAA47174.1| TPA: hypothetical protein ZEAMMB73_366443 [Zea mays]
Length = 609
Score = 61.2 bits (147), Expect = 2e-07
Identities = 27/33 (81%), Positives = 28/33 (84%)
Frame = +3
Query: 249 RPQMRFDPFTGQPYKFDPFTGEPIIPDDLPRRS 347
R QMRFDPFTG+PYKFDPFTGEPI PD RRS
Sbjct: 573 RQQMRFDPFTGEPYKFDPFTGEPIRPDPNQRRS 605
>gb|ACF86800.2| unknown [Zea mays] gi|414868619|tpg|DAA47176.1| TPA: hypothetical
protein ZEAMMB73_366443 [Zea mays]
Length = 438
Score = 61.2 bits (147), Expect = 2e-07
Identities = 27/33 (81%), Positives = 28/33 (84%)
Frame = +3
Query: 249 RPQMRFDPFTGQPYKFDPFTGEPIIPDDLPRRS 347
R QMRFDPFTG+PYKFDPFTGEPI PD RRS
Sbjct: 402 RQQMRFDPFTGEPYKFDPFTGEPIRPDPNQRRS 434
>ref|NP_001130787.1| uncharacterized protein LOC100191891 [Zea mays]
gi|194690114|gb|ACF79141.1| unknown [Zea mays]
gi|414868618|tpg|DAA47175.1| TPA: hypothetical protein
ZEAMMB73_366443 [Zea mays]
Length = 605
Score = 61.2 bits (147), Expect = 2e-07
Identities = 27/33 (81%), Positives = 28/33 (84%)
Frame = +3
Query: 249 RPQMRFDPFTGQPYKFDPFTGEPIIPDDLPRRS 347
R QMRFDPFTG+PYKFDPFTGEPI PD RRS
Sbjct: 569 RQQMRFDPFTGEPYKFDPFTGEPIRPDPNQRRS 601
>ref|XP_006664137.1| PREDICTED: uncharacterized protein LOC102706615 isoform X2 [Oryza
brachyantha]
Length = 558
Score = 60.8 bits (146), Expect = 3e-07
Identities = 30/57 (52%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Frame = +3
Query: 183 SQPQLRSDASPQMGA--SIESRPARPQMRFDPFTGQPYKFDPFTGEPIIPDDLPRRS 347
S + +D P + S E AR Q+RFDPFTG+ YKFDPFTGEPI P+ PR S
Sbjct: 498 SASRYNTDTGPAFSSRSSAEYSTARQQVRFDPFTGEAYKFDPFTGEPIRPESNPRHS 554
>ref|XP_006664136.1| PREDICTED: uncharacterized protein LOC102706615 isoform X1 [Oryza
brachyantha]
Length = 611
Score = 60.8 bits (146), Expect = 3e-07
Identities = 30/57 (52%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Frame = +3
Query: 183 SQPQLRSDASPQMGA--SIESRPARPQMRFDPFTGQPYKFDPFTGEPIIPDDLPRRS 347
S + +D P + S E AR Q+RFDPFTG+ YKFDPFTGEPI P+ PR S
Sbjct: 551 SASRYNTDTGPAFSSRSSAEYSTARQQVRFDPFTGEAYKFDPFTGEPIRPESNPRHS 607
>gb|EMT11921.1| Heterogeneous nuclear ribonucleoprotein A1 [Aegilops tauschii]
Length = 729
Score = 60.5 bits (145), Expect = 4e-07
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +3
Query: 138 IPYERLNLSPVKFRRS-QPQLRSDASPQMGASIESRPARPQMRFDPFTGQPYKFDPFTGE 314
+P ER +S + + +P+ +S +S + A + QMRFDP+TG+PYKFDPFTGE
Sbjct: 661 LPRERRLVSAAGYATNIEPEFKSRSSAEYSAEHQ------QMRFDPYTGEPYKFDPFTGE 714
Query: 315 PIIPDDLPRRS 347
PI P+ RRS
Sbjct: 715 PIRPEPSLRRS 725
>ref|XP_006338380.1| PREDICTED: uncharacterized protein LOC102589697 isoform X1 [Solanum
tuberosum] gi|565342496|ref|XP_006338381.1| PREDICTED:
uncharacterized protein LOC102589697 isoform X2 [Solanum
tuberosum]
Length = 605
Score = 58.9 bits (141), Expect = 1e-06
Identities = 22/32 (68%), Positives = 29/32 (90%)
Frame = +3
Query: 234 ESRPARPQMRFDPFTGQPYKFDPFTGEPIIPD 329
+ + RP++RFDPFTG+PYKFDPFTGEPI+P+
Sbjct: 565 DHQQTRPRIRFDPFTGEPYKFDPFTGEPIVPE 596
>ref|XP_004232173.1| PREDICTED: uncharacterized protein LOC101263365 [Solanum
lycopersicum]
Length = 610
Score = 58.9 bits (141), Expect = 1e-06
Identities = 22/32 (68%), Positives = 29/32 (90%)
Frame = +3
Query: 234 ESRPARPQMRFDPFTGQPYKFDPFTGEPIIPD 329
+ + RP++RFDPFTG+PYKFDPFTGEPI+P+
Sbjct: 570 DHQQTRPRIRFDPFTGEPYKFDPFTGEPIVPE 601
>ref|XP_004962982.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like isoform X2 [Setaria italica]
Length = 600
Score = 58.5 bits (140), Expect = 2e-06
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = +3
Query: 249 RPQMRFDPFTGQPYKFDPFTGEPIIPDDLPRRS 347
R Q+RFDPFTG+PYKFDPFTGEPI P+ RRS
Sbjct: 564 RQQVRFDPFTGEPYKFDPFTGEPIRPEQNQRRS 596
>ref|XP_004962981.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like isoform X1 [Setaria italica]
Length = 602
Score = 58.5 bits (140), Expect = 2e-06
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = +3
Query: 249 RPQMRFDPFTGQPYKFDPFTGEPIIPDDLPRRS 347
R Q+RFDPFTG+PYKFDPFTGEPI P+ RRS
Sbjct: 566 RQQVRFDPFTGEPYKFDPFTGEPIRPEQNQRRS 598
>gb|EMS53186.1| Heterogeneous nuclear ribonucleoprotein A1 [Triticum urartu]
Length = 596
Score = 56.6 bits (135), Expect = 6e-06
Identities = 27/38 (71%), Positives = 30/38 (78%)
Frame = +3
Query: 234 ESRPARPQMRFDPFTGQPYKFDPFTGEPIIPDDLPRRS 347
E RPA MRFDP+TG+PYKFDPFTGEPI P+ RRS
Sbjct: 557 EERPA--VMRFDPYTGEPYKFDPFTGEPIRPEASLRRS 592