BLASTX nr result

ID: Catharanthus22_contig00009821 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00009821
         (1045 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004234363.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-l...    64   8e-08
ref|XP_006353353.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-l...    63   2e-07

>ref|XP_004234363.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Solanum
           lycopersicum]
          Length = 239

 Score = 64.3 bits (155), Expect = 8e-08
 Identities = 29/40 (72%), Positives = 36/40 (90%)
 Frame = -1

Query: 790 KELQSFGEAVGHENRGLSDDLISRLPTFKYRSGLFSKKRK 671
           +ELQS GEAVG ++RGLS DLISRLP+FKY++G FSKK+K
Sbjct: 149 EELQSLGEAVGQQSRGLSQDLISRLPSFKYKTGFFSKKKK 188


>ref|XP_006353353.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-like isoform X1 [Solanum
           tuberosum] gi|565373592|ref|XP_006353354.1| PREDICTED:
           E3 ubiquitin ligase BIG BROTHER-like isoform X2 [Solanum
           tuberosum] gi|565373594|ref|XP_006353355.1| PREDICTED:
           E3 ubiquitin ligase BIG BROTHER-like isoform X3 [Solanum
           tuberosum]
          Length = 239

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 28/40 (70%), Positives = 35/40 (87%)
 Frame = -1

Query: 790 KELQSFGEAVGHENRGLSDDLISRLPTFKYRSGLFSKKRK 671
           +ELQ  GEAVG ++RGLS DL+SRLPTFKY++G FSKK+K
Sbjct: 149 EELQILGEAVGQQSRGLSQDLLSRLPTFKYKTGFFSKKKK 188


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