BLASTX nr result
ID: Catharanthus22_contig00009731
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00009731
(3482 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum] 365 0.0
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 369 0.0
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 353 0.0
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 353 0.0
emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group] 348 0.0
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 350 0.0
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] 350 0.0
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni... 350 0.0
emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group] 347 0.0
emb|CAE02411.2| OSJNBa0024J22.19 [Oryza sativa Japonica Group] 347 0.0
emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group] 283 0.0
gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-... 352 0.0
gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sati... 352 0.0
ref|XP_004954917.1| PREDICTED: uncharacterized protein LOC101752... 362 0.0
ref|XP_004980495.1| PREDICTED: uncharacterized protein LOC101772... 358 0.0
gb|ABA96965.2| retrotransposon protein, putative, Ty3-gypsy subc... 345 0.0
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 362 0.0
emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group] 284 0.0
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 356 0.0
emb|CAD39981.1| OSJNBa0032B23.3 [Oryza sativa Japonica Group] 347 e-176
>gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]
Length = 1004
Score = 365 bits (938), Expect(3) = 0.0
Identities = 170/226 (75%), Positives = 199/226 (88%)
Frame = -2
Query: 1252 LSPGKVLPNRPAYRSPPKETKELKRQVEDLISKGYVRESMSPCAVPVLLVPKKDGTWRMC 1073
L+PG LPNRPAYRS P++T+E++RQV +LISKG+VRES+SPCAVP++LVPKKDG+WRMC
Sbjct: 602 LNPGASLPNRPAYRSNPQQTQEIQRQVAELISKGWVRESLSPCAVPIILVPKKDGSWRMC 661
Query: 1072 IDCRAINNITIKYRHPIPRLDDLLDELHGSNLFSKIDLKSGYHQIRMREGDEWKTAFKTN 893
DCRAI+NITIKYRHPIPRLDDLLDEL G+ LFSKIDLKSGYHQIR+REGDEWKTAFKT
Sbjct: 662 TDCRAISNITIKYRHPIPRLDDLLDELFGACLFSKIDLKSGYHQIRIREGDEWKTAFKTK 721
Query: 892 FGLYEWMVMPFGLTNVPSTFMRLMNHVLRNFIGKFVVVYFDDILVYSKTYEMHVQHLREI 713
FGLYEWMVMPFGLTN PSTFMRLMNHVLR F+GKFVVVYFDDIL+YSK + H HL+ +
Sbjct: 722 FGLYEWMVMPFGLTNAPSTFMRLMNHVLREFLGKFVVVYFDDILIYSKNLDDHCIHLKAV 781
Query: 712 LNILRIEKLFANLDKCEFCLEKVTFLCYVVSSQGLQVDEGKVKQLR 575
L +LR E L+ANL+KC FC + V FL ++VSS+G+ VDE KVK +R
Sbjct: 782 LQVLRYENLYANLEKCVFCTDHVIFLGFIVSSKGVHVDEEKVKAIR 827
Score = 342 bits (877), Expect(3) = 0.0
Identities = 200/575 (34%), Positives = 295/575 (51%), Gaps = 10/575 (1%)
Frame = -1
Query: 2927 FLDWERQVENMFMLKICNKFLKARLVIAEFSGYALHWWERIVNQRVRSGRPPVDTWRELK 2748
+L+WE ++E +F + K ++ EF YAL WW+++ R R P+DTW E+K
Sbjct: 88 YLEWETKLEQIFNCHNYSNLEKVQVASIEFKEYALVWWDQLTKDRRRYAERPIDTWEEMK 147
Query: 2747 ALMRERFVPKHYYRELHYKLMTLKQGAKSVEEYRQELELYILRLNLEEDKDASMARFLSG 2568
+MR RFVP +Y+RELH KL L QG+KSVEEY +E+E+ +R N+EED +A+MARFL G
Sbjct: 148 RIMRRRFVPSYYHRELHNKLQRLTQGSKSVEEYFKEMEVLKIRANVEEDDEATMARFLHG 207
Query: 2567 LNREIANQLELYPHTTYEDMCHLPNKIESQRKRSGMMRSSFPNQRQVATTKPPTSNFKPW 2388
LN +I++ +EL+ + +++ H K+E Q KR R + T N + W
Sbjct: 208 LNHDISDIVELHHYVEMDELVHQAIKVEQQLKRKSQARRN-----------STTFNSQSW 256
Query: 2387 PKKEEDPRGTFQPPTKPKMDERGKIIYDSP---------KCFKCNGVGHYASSCPTKRAL 2235
K++ + + ++ +GK I S KCFKC G GH AS CPTKR +
Sbjct: 257 --KDKTKKEGASSSKEATVENKGKTITSSSSSVSTNKSVKCFKCQGQGHIASQCPTKRTM 314
Query: 2234 IFREDLNGWIXXXXXXXXXXXXXXXXXXXXEHVDLNPLGSDEDVLSLVTIRALSAQTFDD 2055
+ E N I G + L+ +R + +
Sbjct: 315 LMEE--NEEIVEEEDGDYD----------------KEFGEEIPSGDLLMVRRMLGSQIKE 356
Query: 2054 NMIEQRENIFYSKCKVEGRIANLIIDSGSCVNVASTYLVEKLKLPTTKHDKPYKLYWLND 1875
QREN+F+ +C V+G++ +LIID GSC NVAST LV +LKL T H KPYKL WLN+
Sbjct: 357 EDTSQRENLFHIRCFVQGKVCSLIIDGGSCTNVASTRLVSRLKLETKPHPKPYKLQWLNE 416
Query: 1874 SGEIKVLRQVVVPIEMGAYKDEILCDVVPMQACHLLLGSPWQFDRKSLHNGEKNTYSFVK 1695
S E+ V +QV + ++G Y+D +LCDVVPM+A HLLLG PWQFDRK+ H+G N YSF+
Sbjct: 417 SVEMLVNKQVEICFKIGKYEDVVLCDVVPMEASHLLLGRPWQFDRKANHDGYSNKYSFMY 476
Query: 1694 DGRTFTMNPLTPQQVRNEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMXXXXXX 1515
+ + PL P +VR +Q
Sbjct: 477 HDQKINLVPLNPSEVREDQ-----------------------RKMSEKYDQERKEKEKEK 513
Query: 1514 XXXXXXXXXEMKEKNCVFAKPSEAIEAIERKEVVLLLYYRE-SFT*SKEHSPSFSSEILQ 1338
+ ++K + AK + EAI + + LL+ +E + + + I
Sbjct: 514 EKNEKKKNDKREKKQSLIAKIRDVKEAIVSHQPLYLLFCKEVPLLTTISNEKKLPNCIES 573
Query: 1337 VIEDYKDIFPDEMLGGLPPISGIERQIDFVPGEGL 1233
+++++K++FP+E+ GLPPI GIE ID PG L
Sbjct: 574 LLQEFKELFPEEVPSGLPPIRGIEHHIDLNPGASL 608
Score = 272 bits (695), Expect(3) = 0.0
Identities = 123/179 (68%), Positives = 151/179 (84%)
Frame = -1
Query: 587 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 408
+AI+EWP P+N SEVRSFHGL SFYRRF+K+FSTLA+PL ++++K GFK KQEQAF
Sbjct: 824 KAIREWPPPKNVSEVRSFHGLASFYRRFVKDFSTLAAPLNEIVEKDVGFKWGEKQEQAFA 883
Query: 407 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYFSEKLNGAAVRYSTY 228
L EKL AP+L+LPNF K+FE+ECDAS +GIG VL+Q+G PLAYFSEKL GAA+ YSTY
Sbjct: 884 ALKEKLTQAPVLALPNFSKSFEIECDASNVGIGAVLLQEGHPLAYFSEKLKGAALNYSTY 943
Query: 227 DKELYALIRTLKHWQHYLWPKEFVVHNDHEALKFLKGQHKLNKRHARWMKFIETFPYAI 51
DKELY+L+R L+ WQHYL PKEFV+H+DHE+LK LKGQ KLNKRH +W++F+E FPY I
Sbjct: 944 DKELYSLVRALQTWQHYLLPKEFVIHSDHESLKHLKGQGKLNKRHVKWVEFLEQFPYVI 1002
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 369 bits (948), Expect(3) = 0.0
Identities = 168/227 (74%), Positives = 203/227 (89%)
Frame = -2
Query: 1252 LSPGKVLPNRPAYRSPPKETKELKRQVEDLISKGYVRESMSPCAVPVLLVPKKDGTWRMC 1073
L PG LPNRPAYR+ P+ETKE++RQV+ L+ KGYVRES+SPCAVPV+LVPKKDG+WRMC
Sbjct: 715 LIPGATLPNRPAYRTNPEETKEIQRQVQALLDKGYVRESLSPCAVPVILVPKKDGSWRMC 774
Query: 1072 IDCRAINNITIKYRHPIPRLDDLLDELHGSNLFSKIDLKSGYHQIRMREGDEWKTAFKTN 893
+DCRAINNIT++YRHPIPRLDD+LDEL GS +FSKIDL+SG+HQIRM+ GDEWKTAFKT
Sbjct: 775 VDCRAINNITVRYRHPIPRLDDMLDELSGSMIFSKIDLRSGFHQIRMKIGDEWKTAFKTK 834
Query: 892 FGLYEWMVMPFGLTNVPSTFMRLMNHVLRNFIGKFVVVYFDDILVYSKTYEMHVQHLREI 713
FGLYEW+VMPFGLTN PSTFMRLMNHVLR FIGKFVVVYFDDIL+YSKT E HV H++++
Sbjct: 835 FGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGKFVVVYFDDILIYSKTLEEHVAHIQQV 894
Query: 712 LNILRIEKLFANLDKCEFCLEKVTFLCYVVSSQGLQVDEGKVKQLRN 572
L++LR E+L+ANL+KC FC ++V FL +VVS G+QVDE KVK +++
Sbjct: 895 LDVLRKEQLYANLEKCTFCTDQVVFLGFVVSGLGIQVDESKVKAIKD 941
Score = 297 bits (760), Expect(3) = 0.0
Identities = 188/596 (31%), Positives = 278/596 (46%), Gaps = 31/596 (5%)
Frame = -1
Query: 2927 FLDWERQVENMFMLKICNKFLKARLVIAEFSGYALHWWERIVNQRVRSGRPPVDTWRELK 2748
+L WE +V+ +F L ++ K + EF GYAL WWE+++N+R +G+ V +W E+K
Sbjct: 156 YLTWELKVDKIFRLHNYSERKKVAMAALEFDGYALIWWEQMLNEREEAGQGDVRSWAEMK 215
Query: 2747 ALMRERFVPKHYYRELHYKLMTLKQGAKSVEEYRQELELYILRLNLEEDKDASMARFLSG 2568
MR RFVPKHY R+L KL LKQG+ SV+EY +E+E ++R N+ ED++ S+ARF+SG
Sbjct: 216 REMRARFVPKHYRRDLFDKLQNLKQGSLSVDEYYKEMEKAMIRANVYEDEEQSIARFMSG 275
Query: 2567 LNREIANQLELYPHTTYEDMCHLPNKIESQRKRSGMMRSSFPNQRQVATTKPPTSNFKPW 2388
L+R I +E + ++ H +K E Q ++ + R V+ + ++ +
Sbjct: 276 LHRNIQRIVEFQQYRNLIELVHQASKAERQ------LQQDMKSNRGVSFSTKNAASGSKF 329
Query: 2387 PKKEEDPRGTFQPPT----------------------KPKMDERGKIIYDSPK-----CF 2289
+ RG F + K + + S K CF
Sbjct: 330 TSRGSGNRGAFSSSSGGARSSNYGTSSGKDLAAPNERKNAANTSSTSVGSSTKSSGIQCF 389
Query: 2288 KCNGVGHYASSCPTKRALIFREDLNGWIXXXXXXXXXXXXXXXXXXXXEHVDLNPLGSD- 2112
KC G GH A CP R ++ + + + N L D
Sbjct: 390 KCGGRGHVARECPNNRTIVVNDQ-------------GEYESTSEEEQEDSEEENNLEKDI 436
Query: 2111 ---EDVLSLVTIRALSAQTFDDNMIEQRENIFYSKCKVEGRIANLIIDSGSCVNVASTYL 1941
E +LV + LS Q D QR N+F ++ KV+ ++ +IID GSC N+AS +
Sbjct: 437 CEFESGAALVVTQILSVQMSDAEN-GQRHNLFQTRAKVQDKVVKVIIDGGSCHNLASKEM 495
Query: 1940 VEKLKLPTTKHDKPYKLYWLNDSGEIKVLRQVVVPIEMGAYKDEILCDVVPMQACHLLLG 1761
VEKL L KH PY + WLN+SG IK+ ++V VP ++G Y D + CDV PM CH+LLG
Sbjct: 496 VEKLGLKLLKHPHPYHVQWLNNSGSIKIAQRVKVPFKIGEYIDTMECDVAPMTVCHMLLG 555
Query: 1760 SPWQFDRKSLHNGEKNTYSFVKDGRTFTMNPLTPQQVRNEQXXXXXXXXXXXXXXXXXXX 1581
PWQ+DR SLH G N Y+ G+ + P+TPQQ+ E
Sbjct: 556 RPWQYDRSSLHCGRTNQYTIKWKGKELILKPMTPQQILAEHLQKSSEVRNESAKEGQKNN 615
Query: 1580 XXXXXXXXXXXXXXVMXXXXXXXXXXXXXXXEMKEKNCVFAKPSEAIEAIERKEVVLLLY 1401
M E + A SE + E VL +
Sbjct: 616 LSAPHKSVSESHKPNMRDNKKREG----------ENLVMIATKSEMRDVRRNPEQVLFIL 665
Query: 1400 YRESFT*SKEHSPSFSSEILQVIEDYKDIFPDEMLGGLPPISGIERQIDFVPGEGL 1233
+ S S S + +V+++Y+D+FP+E GLPP+ GIE QID +PG L
Sbjct: 666 VCKDTLLSANDLTSVPSVVARVLQEYEDVFPEETPVGLPPLRGIEHQIDLIPGATL 721
Score = 292 bits (747), Expect(3) = 0.0
Identities = 133/195 (68%), Positives = 164/195 (84%)
Frame = -1
Query: 587 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 408
+AIK+WPTP N S+V+SF GL FYRRF++ FST+A+PL ++ KK F+ QE+AF+
Sbjct: 937 KAIKDWPTPENVSQVKSFRGLAGFYRRFVRGFSTIAAPLNELTKKGVAFQWGEPQEKAFQ 996
Query: 407 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYFSEKLNGAAVRYSTY 228
L ++L PLL LP+F KTFEVECDASGIGIGGVLMQ+G+P+AYFSEKL GA + YS Y
Sbjct: 997 ELKKRLSEGPLLVLPDFTKTFEVECDASGIGIGGVLMQNGQPVAYFSEKLGGAQLNYSVY 1056
Query: 227 DKELYALIRTLKHWQHYLWPKEFVVHNDHEALKFLKGQHKLNKRHARWMKFIETFPYAIH 48
DKELYAL+R L+ WQHYLWPKEFV+H+DHEALK+LKGQ KLN+RHA+W++FIETFPY +
Sbjct: 1057 DKELYALVRALETWQHYLWPKEFVIHSDHEALKYLKGQAKLNRRHAKWVEFIETFPYVVK 1116
Query: 47 YKKGKENVVADALSR 3
YKKGKEN+VADALSR
Sbjct: 1117 YKKGKENIVADALSR 1131
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 353 bits (906), Expect(3) = 0.0
Identities = 162/227 (71%), Positives = 195/227 (85%)
Frame = -2
Query: 1252 LSPGKVLPNRPAYRSPPKETKELKRQVEDLISKGYVRESMSPCAVPVLLVPKKDGTWRMC 1073
L PG LPNR YR+ P+ETKE++RQV +L+ KGYVRES+SPCAVPV+LVPKKDG+WRMC
Sbjct: 712 LIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMC 771
Query: 1072 IDCRAINNITIKYRHPIPRLDDLLDELHGSNLFSKIDLKSGYHQIRMREGDEWKTAFKTN 893
+DCRAINNITI+YRHPIPRLDD+LDEL GS +FSK+DL+SGYHQIRM+ GDEWKTAFKT
Sbjct: 772 VDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVDLRSGYHQIRMKLGDEWKTAFKTK 831
Query: 892 FGLYEWMVMPFGLTNVPSTFMRLMNHVLRNFIGKFVVVYFDDILVYSKTYEMHVQHLREI 713
FGLYEW+VMPFGLTN PSTFMRLMN VLR FIGKFVVVYFDDIL+YSK+ H HLR +
Sbjct: 832 FGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAV 891
Query: 712 LNILRIEKLFANLDKCEFCLEKVTFLCYVVSSQGLQVDEGKVKQLRN 572
N LR +LF NL+KC FC ++V+FL YVV+ QG++VD+ KV+ +++
Sbjct: 892 FNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQS 938
Score = 291 bits (744), Expect(3) = 0.0
Identities = 188/588 (31%), Positives = 279/588 (47%), Gaps = 23/588 (3%)
Frame = -1
Query: 2927 FLDWERQVENMFMLKICNKFLKARLVIAEFSGYALHWWERIVNQRVRSGRPPVDTWRELK 2748
+L WE V+ F + + R +EF+ +A WW + ++ TW LK
Sbjct: 169 YLSWEIAVDQKFACHEFPESTRVRAATSEFTDFASVWW---IEHGKKNPNNMPQTWDALK 225
Query: 2747 ALMRERFVPKHYYRELHYKLMTLKQGAKSVEEYRQELELYILRLNLEEDKDASMARFLSG 2568
+MR RFVP +Y R+L +L L+QGAKSVEEY QEL++ +LR NLEE +DA+MARFL G
Sbjct: 226 RVMRARFVPSYYARDLLNRLQQLRQGAKSVEEYYQELQMGLLRCNLEETEDAAMARFLGG 285
Query: 2567 LNREIANQLELYPHTTYEDMCHLPNKIESQ---------------RKRSGMMRSSFPNQR 2433
LNREI + ++ +T + HL K E + + S R++ P R
Sbjct: 286 LNREIYDIVDYKDYTNMTRLFHLACKAEREVQGRRASAKANFSAGKTSSWQTRTTPPAGR 345
Query: 2432 QVA-TTKPPTSNFKPWPKKEEDPRGTFQP-PTKPKMDERGKIIYDSPKCFKCNGVGHYAS 2259
+ ++ P TS P P ++ QP P+ M G++ +C +C G GH
Sbjct: 346 TASPSSTPTTSRAAPPPSSDKSATKAAQPAPSASSMASTGRM--RDVQCHRCKGFGHVQR 403
Query: 2258 SCPTKRALIFREDLNGWIXXXXXXXXXXXXXXXXXXXXEHVDLNP----LGSD--EDVLS 2097
CP+KR L+ + D +H D P +G+ + S
Sbjct: 404 DCPSKRVLVVKND------GEYSSASDFDDDTLALLAADHADNEPPEEHIGAAFADHYES 457
Query: 2096 LVTIRALSAQTFDDNMIEQRENIFYSKCKVEGRIANLIIDSGSCVNVASTYLVEKLKLPT 1917
L+ R LSAQ + QR +F +KC V+ R +IID GSC N+AS+ +VEKL L T
Sbjct: 458 LIVQRVLSAQ-MEKAEQNQRHTLFQTKCVVKERCCRMIIDGGSCNNLASSEMVEKLALST 516
Query: 1916 TKHDKPYKLYWLNDSGEIKVLRQVVVPIEMGAYKDEILCDVVPMQACHLLLGSPWQFDRK 1737
H PY + WLN+SG+ KV + V + +G Y D + CDVVPMQAC++LLG PWQFDR
Sbjct: 517 KPHPHPYYIQWLNNSGKAKVTKLVHINFAIGNYHDVVECDVVPMQACNILLGRPWQFDRD 576
Query: 1736 SLHNGEKNTYSFVKDGRTFTMNPLTPQQVRNEQXXXXXXXXXXXXXXXXXXXXXXXXXXX 1557
S+H+G N YSF+ + ++ ++P+ + +
Sbjct: 577 SMHHGRSNQYSFLYHDKKIVLHSMSPEDILRDDVAKAAKSKCE----------------- 619
Query: 1556 XXXXXXVMXXXXXXXXXXXXXXXEMKEKNCVFAKPSEAIEAIERKEVVLLLYYRESFT*S 1377
+K K C+ A S+ E I V L +++
Sbjct: 620 --------SDKKAQSDGKKPETINLKPK-CLLATKSDINELIASPSVAYALVCKDALISL 670
Query: 1376 KEHSPSFSSEILQVIEDYKDIFPDEMLGGLPPISGIERQIDFVPGEGL 1233
+ S + ++++Y D+FP E+ GLPP+ GIE QID +PG L
Sbjct: 671 HDMQHSLPPAVANILQEYSDVFPKEVPPGLPPVRGIEHQIDLIPGASL 718
Score = 283 bits (725), Expect(3) = 0.0
Identities = 128/195 (65%), Positives = 163/195 (83%)
Frame = -1
Query: 587 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 408
+AI+ WPTP+ S+VRSF GL FYRRF+++FST+A+PL + KK F T QE AF
Sbjct: 934 EAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNVLTKKGVPFTWGTSQENAFH 993
Query: 407 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYFSEKLNGAAVRYSTY 228
+L +KL APLL LP+F KTFE+ECDASGIG+GGVL+Q+GKP+AYFSEKL+G + YSTY
Sbjct: 994 MLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPVLNYSTY 1053
Query: 227 DKELYALIRTLKHWQHYLWPKEFVVHNDHEALKFLKGQHKLNKRHARWMKFIETFPYAIH 48
DKELYAL+RTL+ WQHYLWPKEFV+H+DHE+LK ++ Q KLN+RHA+W++FIE+FPY I
Sbjct: 1054 DKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIK 1113
Query: 47 YKKGKENVVADALSR 3
+KKGKEN++ADALSR
Sbjct: 1114 HKKGKENIIADALSR 1128
Score = 179 bits (455), Expect = 6e-42
Identities = 90/194 (46%), Positives = 126/194 (64%)
Frame = -1
Query: 584 AIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFKL 405
A+ +W P+ +++RSF GL +YRRFI+NFS +A P+T ++KK E F + E+AF+
Sbjct: 1727 AVTDWKQPKTVTQIRSFLGLAGYYRRFIENFSKIARPMTQLLKKEEKFVWSPQCEKAFQT 1786
Query: 404 LNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYFSEKLNGAAVRYSTYD 225
L EKL S+P+L LP+ K F V CDAS G+G VLMQ+G +AY S +L Y T+D
Sbjct: 1787 LKEKLVSSPVLILPDTRKDFMVYCDASPQGLGCVLMQEGHVVAYASRQLWPHEGNYPTHD 1846
Query: 224 KELYALIRTLKHWQHYLWPKEFVVHNDHEALKFLKGQHKLNKRHARWMKFIETFPYAIHY 45
EL A++ LK W+HYL ++ DH++LK++ Q LN R RW++ I+ + IHY
Sbjct: 1847 LELAAVVHALKIWRHYLIGNRCEIYTDHKSLKYIFTQSDLNLRQRRWLELIKDYDVGIHY 1906
Query: 44 KKGKENVVADALSR 3
GK NVVADALSR
Sbjct: 1907 HPGKANVVADALSR 1920
Score = 113 bits (282), Expect = 7e-22
Identities = 60/134 (44%), Positives = 86/134 (64%), Gaps = 2/134 (1%)
Frame = -2
Query: 949 YHQIRMREGDEWKT--AFKTNFGLYEWMVMPFGLTNVPSTFMRLMNHVLRNFIGKFVVVY 776
+H+ GD+ T + ++GLYE+ VM FGLTN P+ FM LMN V ++ KFVVV+
Sbjct: 1603 HHKFAATIGDDRATNPSGFASYGLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVF 1662
Query: 775 FDDILVYSKTYEMHVQHLREILNILRIEKLFANLDKCEFCLEKVTFLCYVVSSQGLQVDE 596
DDILVYS++ E H HLR +L LR +L+A L KCEF L +V FL +V+S++G+ VD
Sbjct: 1663 IDDILVYSQSEEDHQHHLRLVLGKLREHQLYAKLSKCEFWLSEVKFLGHVISAKGVAVDP 1722
Query: 595 GKVKQLRNGQHQET 554
V + + + +T
Sbjct: 1723 ETVTAVTDWKQPKT 1736
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 353 bits (905), Expect(3) = 0.0
Identities = 162/227 (71%), Positives = 196/227 (86%)
Frame = -2
Query: 1252 LSPGKVLPNRPAYRSPPKETKELKRQVEDLISKGYVRESMSPCAVPVLLVPKKDGTWRMC 1073
L PG LPNR YR+ P+ETKE++RQV++L+ KGYVRES+SPC+VPVLLVPKKDG+WRMC
Sbjct: 740 LIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCSVPVLLVPKKDGSWRMC 799
Query: 1072 IDCRAINNITIKYRHPIPRLDDLLDELHGSNLFSKIDLKSGYHQIRMREGDEWKTAFKTN 893
+DCRAINNITI+YRHPIPRLDD+LDEL GS +FSKIDL+SGYHQIRM+ GDEWKTAFKT
Sbjct: 800 VDCRAINNITIRYRHPIPRLDDMLDELSGSLVFSKIDLRSGYHQIRMKLGDEWKTAFKTK 859
Query: 892 FGLYEWMVMPFGLTNVPSTFMRLMNHVLRNFIGKFVVVYFDDILVYSKTYEMHVQHLREI 713
FGLYEW+VMPFGLTN PSTFMRLMN VLR FIG+FVVVYFDDIL+YS++ E H HLR +
Sbjct: 860 FGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGRFVVVYFDDILIYSRSIEDHHGHLRAV 919
Query: 712 LNILRIEKLFANLDKCEFCLEKVTFLCYVVSSQGLQVDEGKVKQLRN 572
+ LR +LF NL+KC FC ++V+FL YVV+ QG++VD+ KV+ + N
Sbjct: 920 FDALRDARLFGNLEKCTFCTDRVSFLSYVVTPQGIEVDQAKVEAIHN 966
Score = 285 bits (728), Expect(3) = 0.0
Identities = 194/594 (32%), Positives = 276/594 (46%), Gaps = 29/594 (4%)
Frame = -1
Query: 2927 FLDWERQVENMFMLKICNKFLKARLVIA---EFSGYALHWWERIVNQRVRSGRPPVDTWR 2757
+L WE ++ F C+ F + + V A EF+ +A WW V R P TW
Sbjct: 171 YLTWELAIDQKFA---CHDFPENKCVRAATSEFTDFASIWWSEFV--RSNPNNTP-QTWD 224
Query: 2756 ELKALMRERFVPKHYYRELHYKLMTLKQGAKSVEEYRQELELYILRLNLEEDKDASMARF 2577
+K +MR RFVP ++ R+L +KL L+QG KSVEEY Q L+ +LR L E+ DA MARF
Sbjct: 225 AMKRVMRARFVPSYHARDLLHKLQQLRQGNKSVEEYYQALQTGMLRCGLVENDDAGMARF 284
Query: 2576 LSGLNREIANQLELYPHTTYEDMCHLPNKIESQ-RKRSGMMRSSF--------------- 2445
+ GLNREI + L + + + HL K E + + R R++
Sbjct: 285 MGGLNREIQDILTYKEYNSINHLFHLACKAEREVQGRRASFRTNISAGRASSWTSSNAAA 344
Query: 2444 PNQRQVATT------KPPTSNFKPWPKKEEDPRGTFQPPTKPKMDERGKIIYDSPKCFKC 2283
P+ R A + +P T+N P P E RG P+K +C +C
Sbjct: 345 PSTRAAAPSSSSNKLRPSTTNSTPCPS--EPTRGVAATPSKTSSSVASSGRTRDIQCLRC 402
Query: 2282 NGVGHYASSCPTKRALIFRED--LNGWIXXXXXXXXXXXXXXXXXXXXEHVDLNPLGSD- 2112
G GH CP+ R +I R D + H D +G++
Sbjct: 403 KGYGHVRKDCPSTRVMIVRADGGYSSASDLDGETYALLATNNAREGDAPHQDEEHIGAEA 462
Query: 2111 -EDVLSLVTIRALSAQTFDDNMIEQRENIFYSKCKVEGRIANLIIDSGSCVNVASTYLVE 1935
E SLV R LSAQ + QR +F +KC ++ R +IID GSC N+AS +VE
Sbjct: 463 AEHYESLVVQRVLSAQ-MERAEQNQRHTLFQTKCVIKERSCRVIIDGGSCNNLASAEMVE 521
Query: 1934 KLKLPTTKHDKPYKLYWLNDSGEIKVLRQVVVPIEMGAYKDEILCDVVPMQACHLLLGSP 1755
KL L T H +PY + WLN SG++KV R V V +G+Y D I CDVVPMQAC +LLG P
Sbjct: 522 KLALSTQPHPQPYYIQWLNSSGKVKVTRLVRVHFAIGSYHDSINCDVVPMQACSMLLGRP 581
Query: 1754 WQFDRKSLHNGEKNTYSFVKDGRTFTMNPLTPQQVRNEQXXXXXXXXXXXXXXXXXXXXX 1575
WQFD+ SLH G+ N YSFV +G+ ++P++P+ + ++
Sbjct: 582 WQFDKDSLHFGKSNQYSFVHNGKKLVLHPMSPEVILKDELARASKQKNQEHTRSEHLIAA 641
Query: 1574 XXXXXXXXXXXXVMXXXXXXXXXXXXXXXEMKEKNCVFAKPSEAIEAIERKEVVLLLYYR 1395
+ + +C A S+ E V L +
Sbjct: 642 NELEKHKKKPTNSVQNNKNEIKL---------KGSCFIATKSDLDEVDTDTVVCYALVCK 692
Query: 1394 ESFT*SKEHSPSFSSEILQVIEDYKDIFPDEMLGGLPPISGIERQIDFVPGEGL 1233
E+ ++ S + ++++Y DIFP E+ GLPPI GIE QID +PG L
Sbjct: 693 ETLFPIEDTPISLPPPVTNLLQEYADIFPKEVPPGLPPIRGIEHQIDLIPGASL 746
Score = 273 bits (698), Expect(3) = 0.0
Identities = 124/195 (63%), Positives = 158/195 (81%)
Frame = -1
Query: 587 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 408
+AI WP P ++VRSF GL FYRRF+K+FST+A+PL ++ K+ F Q AF
Sbjct: 962 EAIHNWPVPTTITQVRSFLGLAGFYRRFVKDFSTIAAPLHELTKRNVTFTWAAAQRNAFD 1021
Query: 407 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYFSEKLNGAAVRYSTY 228
L +KL APLL LP+F KTFE ECDASGIG+GGVL+Q+GKP+AYFSEKL+G ++ YSTY
Sbjct: 1022 TLKDKLTHAPLLQLPDFNKTFEHECDASGIGLGGVLLQEGKPVAYFSEKLSGPSLNYSTY 1081
Query: 227 DKELYALIRTLKHWQHYLWPKEFVVHNDHEALKFLKGQHKLNKRHARWMKFIETFPYAIH 48
DKEL+AL+RTL+ WQHYLWPKEFV+H+DHE+LK ++ Q KLN+RHA+W++FIE+FPY I
Sbjct: 1082 DKELFALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQAKLNRRHAKWVEFIESFPYVIK 1141
Query: 47 YKKGKENVVADALSR 3
+KKGKENV+ADALSR
Sbjct: 1142 HKKGKENVIADALSR 1156
>emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]
Length = 2241
Score = 348 bits (892), Expect(3) = 0.0
Identities = 160/227 (70%), Positives = 192/227 (84%)
Frame = -2
Query: 1252 LSPGKVLPNRPAYRSPPKETKELKRQVEDLISKGYVRESMSPCAVPVLLVPKKDGTWRMC 1073
L PG LPNR YR+ P+ETKE++RQV +L+ KGYVRES+SPCAVPV+LVPKKDG+WRMC
Sbjct: 806 LIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMC 865
Query: 1072 IDCRAINNITIKYRHPIPRLDDLLDELHGSNLFSKIDLKSGYHQIRMREGDEWKTAFKTN 893
+DCRAINN TI+YRHPIPRLDD+LDEL GS +FSK+DL+SGYHQIRM+ GDEWKT FKT
Sbjct: 866 VDCRAINNNTIRYRHPIPRLDDMLDELSGSIVFSKVDLRSGYHQIRMKLGDEWKTTFKTK 925
Query: 892 FGLYEWMVMPFGLTNVPSTFMRLMNHVLRNFIGKFVVVYFDDILVYSKTYEMHVQHLREI 713
FGLYEW+VMPFGLTN PSTFMRLMN VLR FIGKFVVVYFDDIL+YSK+ H HLR +
Sbjct: 926 FGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAV 985
Query: 712 LNILRIEKLFANLDKCEFCLEKVTFLCYVVSSQGLQVDEGKVKQLRN 572
N LR +LF NL KC FC ++V+FL YVV+ QG++VD+ KV+ +++
Sbjct: 986 FNALRDARLFGNLKKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQS 1032
Score = 281 bits (719), Expect(3) = 0.0
Identities = 126/195 (64%), Positives = 162/195 (83%)
Frame = -1
Query: 587 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 408
+AI+ WPTP+ S+VRSF GL FYRRF+++FST+A+PL + KK F T QE AF
Sbjct: 1028 EAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFH 1087
Query: 407 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYFSEKLNGAAVRYSTY 228
+L +KL APLL LP+F KTFE+ECDA+GIG+GGV +Q+GKP+AYFSEKL+G + YSTY
Sbjct: 1088 MLKDKLTHAPLLQLPDFNKTFELECDANGIGLGGVFLQEGKPVAYFSEKLSGPVLNYSTY 1147
Query: 227 DKELYALIRTLKHWQHYLWPKEFVVHNDHEALKFLKGQHKLNKRHARWMKFIETFPYAIH 48
DKELYAL+RTL+ WQHYLWPKEFV+H+DHE+LK ++ Q KLN+RHA+W++FIE+FPY I
Sbjct: 1148 DKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIK 1207
Query: 47 YKKGKENVVADALSR 3
+KKGKEN++ADALSR
Sbjct: 1208 HKKGKENIIADALSR 1222
Score = 279 bits (713), Expect(3) = 0.0
Identities = 186/588 (31%), Positives = 278/588 (47%), Gaps = 23/588 (3%)
Frame = -1
Query: 2927 FLDWERQVENMFMLKICNKFLKARLVIAEFSGYALHWWERIVNQRVRSGRPPVDTWRELK 2748
+L WE V+ F + + R +EF+ +A WW + ++ TW LK
Sbjct: 263 YLSWEIAVDQKFACHEFPENTRVRAATSEFTDFASVWW---IEHGKKNPNNMPQTWDALK 319
Query: 2747 ALMRERFVPKHYYRELHYKLMTLKQGAKSVEEYRQELELYILRLNLEEDKDASMARFLSG 2568
+MR RFVP +Y R+L +L L+QG KSVEEY QEL++ +LR NLEE +DA+MARFL G
Sbjct: 320 RVMRARFVPSYYARDLLNRLQQLRQGVKSVEEYYQELQMGLLRCNLEETEDAAMARFLGG 379
Query: 2567 LNREIANQLELYPHTTYEDMCHLPNKIESQ---------------RKRSGMMRSSFPNQR 2433
LNREI + ++ +T + HL K E + + S R++ P R
Sbjct: 380 LNREIYDIVDYKVYTNMTRLFHLACKAEREVQGRRASAKANFSAGKTSSWQTRTTPPAGR 439
Query: 2432 QVA-TTKPPTSNFKPWPKKEEDPRGTFQP-PTKPKMDERGKIIYDSPKCFKCNGVGHYAS 2259
+ ++ P TS P P ++ QP P+ M G++ +C +C G GH
Sbjct: 440 TTSPSSTPTTSRAAPPPSGDKSAIKAAQPAPSASSMASTGRM--RDVQCHRCKGFGHVQR 497
Query: 2258 SCPTKRALIFREDLNGWIXXXXXXXXXXXXXXXXXXXXEHVDLNP----LGSD--EDVLS 2097
CP+KR L+ + D +H D P +G+ + S
Sbjct: 498 DCPSKRVLVVKND------GEYSSASDFDDDTLALLAADHADNEPPEEHIGAAFADHYES 551
Query: 2096 LVTIRALSAQTFDDNMIEQRENIFYSKCKVEGRIANLIIDSGSCVNVASTYLVEKLKLPT 1917
L+ R LSAQ + QR +F +KC V+ R +IID GSC N+AS+ +VEKL L T
Sbjct: 552 LIVQRVLSAQ-MEKAEQNQRHTLFQTKCVVKERCCRMIIDGGSCNNLASSEMVEKLALST 610
Query: 1916 TKHDKPYKLYWLNDSGEIKVLRQVVVPIEMGAYKDEILCDVVPMQACHLLLGSPWQFDRK 1737
H PY + WLN+SG+ KV + V + +G Y D + CDVVPMQAC++LLG PWQFDR
Sbjct: 611 KPHPHPYCIQWLNNSGKAKVTKLVHINFAIGNYHDVVECDVVPMQACNILLGRPWQFDRD 670
Query: 1736 SLHNGEKNTYSFVKDGRTFTMNPLTPQQVRNEQXXXXXXXXXXXXXXXXXXXXXXXXXXX 1557
S+H+G N YSF+ + ++P++P+ + +
Sbjct: 671 SMHHGRSNQYSFLYHDKKIVLHPMSPEDILRDDVAKAAKSKCESDKKAQSDG-------- 722
Query: 1556 XXXXXXVMXXXXXXXXXXXXXXXEMKEKNCVFAKPSEAIEAIERKEVVLLLYYRESFT*S 1377
+ N + A PS A A+ K+ ++ L+
Sbjct: 723 --------KKPETINLKPRYLLATKSDINELIASPSVAY-ALVCKDALISLH-------- 765
Query: 1376 KEHSPSFSSEILQVIEDYKDIFPDEMLGGLPPISGIERQIDFVPGEGL 1233
+ S + ++++Y D+FP E+ GLP + GIE QID +PG L
Sbjct: 766 -DMQHSLPPAVANILQEYSDVFPKEVPPGLPLVRGIEHQIDLIPGASL 812
Score = 80.1 bits (196), Expect(2) = 1e-27
Identities = 40/96 (41%), Positives = 60/96 (62%)
Frame = -1
Query: 581 IKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFKLL 402
I + P P N +RSF G FYRRFIK+FST+A PLT+++ K F+ + ++F++L
Sbjct: 2127 IDQLPPPVNIKGIRSFLGHADFYRRFIKDFSTIARPLTNLLAKDTPFEFDDACLKSFEIL 2186
Query: 401 NEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQ 294
+ L S P++ P++ FE+ CDAS +G VL Q
Sbjct: 2187 KKALDSGPIIQPPDWTLPFEIMCDASDFAVGAVLGQ 2222
Score = 73.2 bits (178), Expect(2) = 1e-27
Identities = 36/112 (32%), Positives = 61/112 (54%)
Frame = -2
Query: 922 DEWKTAFKTNFGLYEWMVMPFGLTNVPSTFMRLMNHVLRNFIGKFVVVYFDDILVYSKTY 743
D+ KT F +G Y + M FGL N P++F R M + + I + ++ DD VY KT+
Sbjct: 2013 DQSKTTFTCPYGTYAYRRMSFGLCNAPASFQRCMMSIFSDMIEDIMEIFMDDFSVYGKTF 2072
Query: 742 EMHVQHLREILNILRIEKLFANLDKCEFCLEKVTFLCYVVSSQGLQVDEGKV 587
+Q+L ++L + + L N +KC F + + L + VS +G++ D K+
Sbjct: 2073 GHCLQNLDKVLQRCQEKDLVLNWEKCHFMVREGIVLGHRVSERGIEFDRAKI 2124
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 350 bits (899), Expect(3) = 0.0
Identities = 160/227 (70%), Positives = 197/227 (86%)
Frame = -2
Query: 1252 LSPGKVLPNRPAYRSPPKETKELKRQVEDLISKGYVRESMSPCAVPVLLVPKKDGTWRMC 1073
L PG LPNR YR+ P+ETKE++RQV++L+ KGYVRES+SPC++PVLLVPKKDG+WRMC
Sbjct: 740 LIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCSIPVLLVPKKDGSWRMC 799
Query: 1072 IDCRAINNITIKYRHPIPRLDDLLDELHGSNLFSKIDLKSGYHQIRMREGDEWKTAFKTN 893
+DCRAINNITI+YRHPIPRLDD+LDEL GS +FSKIDL+SGYHQIRM+ GDEWKTAFKT
Sbjct: 800 VDCRAINNITIRYRHPIPRLDDMLDELSGSLVFSKIDLRSGYHQIRMKLGDEWKTAFKTK 859
Query: 892 FGLYEWMVMPFGLTNVPSTFMRLMNHVLRNFIGKFVVVYFDDILVYSKTYEMHVQHLREI 713
FGLYEW+VMPFGLTN PSTF+RLMN VLR FIG+FVVVYFDDIL+YS++ E H HLR +
Sbjct: 860 FGLYEWLVMPFGLTNAPSTFIRLMNEVLRAFIGRFVVVYFDDILIYSRSIEDHHGHLRAV 919
Query: 712 LNILRIEKLFANLDKCEFCLEKVTFLCYVVSSQGLQVDEGKVKQLRN 572
+ LR E+LF NL+KC FC ++V+FL YVV+ QG++VD+ KV+ + +
Sbjct: 920 FDALRDERLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIHS 966
Score = 284 bits (726), Expect(3) = 0.0
Identities = 190/591 (32%), Positives = 272/591 (46%), Gaps = 26/591 (4%)
Frame = -1
Query: 2927 FLDWERQVENMFMLKICNKFLKARLVIAEFSGYALHWWERIVNQRVRSGRPPVDTWRELK 2748
+L WE ++ F + + R +EF+ +A WW V R P TW +K
Sbjct: 171 YLTWELAIDQKFACHDFPENKRVRAATSEFTDFASIWWSEFV--RSNPNNTP-QTWDAMK 227
Query: 2747 ALMRERFVPKHYYRELHYKLMTLKQGAKSVEEYRQELELYILRLNLEEDKDASMARFLSG 2568
+MR RFVP ++ R+L +KL L+QG KSVEEY Q L+ +LR L E+ DA MARF+ G
Sbjct: 228 RVMRARFVPSYHARDLLHKLQQLRQGNKSVEEYYQALQTGMLRCGLVENDDAGMARFMGG 287
Query: 2567 LNREIANQLELYPHTTYEDMCHLPNKIESQ-RKRSGMMRSSF---------------PNQ 2436
LNREI + L + + + HL K E + + R R++ P+
Sbjct: 288 LNREIQDILAYKEYNSINRLFHLACKAEREVQGRRASFRTNISAGRASSWTSSNVAAPST 347
Query: 2435 RQVATT------KPPTSNFKPWPKKEEDPRGTFQPPTKPKMDERGKIIYDSPKCFKCNGV 2274
R A + +P T+N P P E RG P+K +C +C G
Sbjct: 348 RAAAPSSSNNKLRPSTTNSTPCPS--EPTRGVAATPSKSSSSVASSGRTRDIQCLRCKGY 405
Query: 2273 GHYASSCPTKRALIFRED--LNGWIXXXXXXXXXXXXXXXXXXXXEHVDLNPLGSD--ED 2106
GH CP+ R +I R D + H D +G++ E
Sbjct: 406 GHVRKDCPSTRVMIVRADGGYSSASDLDEETYALLATNNAGKGDAPHQDEEHIGAEAAEH 465
Query: 2105 VLSLVTIRALSAQTFDDNMIEQRENIFYSKCKVEGRIANLIIDSGSCVNVASTYLVEKLK 1926
SLV R LSAQ + QR +F +KC ++ R +IID GSC N+AS +VEKL
Sbjct: 466 YESLVVQRVLSAQ-MERAEQNQRHTLFQTKCVIKERSCRVIIDRGSCNNLASAEMVEKLA 524
Query: 1925 LPTTKHDKPYKLYWLNDSGEIKVLRQVVVPIEMGAYKDEILCDVVPMQACHLLLGSPWQF 1746
L T H +PY + WLN SG++KV R V V +G+Y D I CDVVPMQAC + LG PWQF
Sbjct: 525 LSTQPHPQPYYIQWLNSSGKVKVTRLVRVHFAIGSYHDSINCDVVPMQACSIFLGRPWQF 584
Query: 1745 DRKSLHNGEKNTYSFVKDGRTFTMNPLTPQQVRNEQXXXXXXXXXXXXXXXXXXXXXXXX 1566
D+ SLH G+ N YSFV +G+ ++P++P+ + ++
Sbjct: 585 DKDSLHFGKSNQYSFVHNGKKLVLHPMSPEVILKDELARASKQKNQEHTRSEHLIAANEL 644
Query: 1565 XXXXXXXXXVMXXXXXXXXXXXXXXXEMKEKNCVFAKPSEAIEAIERKEVVLLLYYRESF 1386
+ + +C A S+ E V L +E+
Sbjct: 645 EKHKKKPTNSVQNNKNEIKL---------KGSCFIATKSDLDEVDTDTVVCYALVCKETL 695
Query: 1385 T*SKEHSPSFSSEILQVIEDYKDIFPDEMLGGLPPISGIERQIDFVPGEGL 1233
++ S + ++++Y DIFP E+ GLPPI GIE QID +PG L
Sbjct: 696 FPIEDTPISLPPPVTNLLQEYADIFPKEVPPGLPPIRGIEHQIDLIPGASL 746
Score = 273 bits (698), Expect(3) = 0.0
Identities = 123/195 (63%), Positives = 158/195 (81%)
Frame = -1
Query: 587 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 408
+AI WP P ++VRSF GL FYRRF+K+FST+A+PL ++ K+ F Q AF
Sbjct: 962 EAIHSWPVPTTITQVRSFLGLAGFYRRFVKDFSTIAAPLHELTKRNVTFTWAAAQRNAFD 1021
Query: 407 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYFSEKLNGAAVRYSTY 228
L +KL APLL LP+F KTFE+ECDASGIG+GGVL+Q+GKP+ YFSEKL+G ++ YSTY
Sbjct: 1022 TLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPIEYFSEKLSGPSLNYSTY 1081
Query: 227 DKELYALIRTLKHWQHYLWPKEFVVHNDHEALKFLKGQHKLNKRHARWMKFIETFPYAIH 48
DKEL+AL+RTL+ WQHYLWPKEFV+H+DHE+LK ++ Q KLN+RHA+W++FIE+FPY I
Sbjct: 1082 DKELFALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQAKLNRRHAKWVEFIESFPYVIK 1141
Query: 47 YKKGKENVVADALSR 3
+KKGKENV+ADALSR
Sbjct: 1142 HKKGKENVIADALSR 1156
>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
Length = 1587
Score = 350 bits (898), Expect(3) = 0.0
Identities = 161/227 (70%), Positives = 196/227 (86%)
Frame = -2
Query: 1252 LSPGKVLPNRPAYRSPPKETKELKRQVEDLISKGYVRESMSPCAVPVLLVPKKDGTWRMC 1073
L PG LPNR YR+ P+ETKE++RQV++L+ KGYVRES+SPC+VPVLLVPKKDG+WRMC
Sbjct: 740 LIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCSVPVLLVPKKDGSWRMC 799
Query: 1072 IDCRAINNITIKYRHPIPRLDDLLDELHGSNLFSKIDLKSGYHQIRMREGDEWKTAFKTN 893
+DCRAINNITI+YRHPIPRLDD+LDEL GS +FSKIDL+SGYHQIRM+ GDEWKTAFKT
Sbjct: 800 VDCRAINNITIRYRHPIPRLDDMLDELSGSLVFSKIDLRSGYHQIRMKLGDEWKTAFKTK 859
Query: 892 FGLYEWMVMPFGLTNVPSTFMRLMNHVLRNFIGKFVVVYFDDILVYSKTYEMHVQHLREI 713
FGLYEW+VMPFGLTN PSTFMRLMN VLR FIG+FVVVYFDDIL+YS++ E H HLR +
Sbjct: 860 FGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGRFVVVYFDDILIYSRSIEDHHGHLRAV 919
Query: 712 LNILRIEKLFANLDKCEFCLEKVTFLCYVVSSQGLQVDEGKVKQLRN 572
+ LR +LF NL+KC FC ++V+FL YVV+ QG++VD+ KV+ + +
Sbjct: 920 FDALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIHS 966
Score = 278 bits (711), Expect(3) = 0.0
Identities = 188/591 (31%), Positives = 272/591 (46%), Gaps = 26/591 (4%)
Frame = -1
Query: 2927 FLDWERQVENMFMLKICNKFLKARLVIAEFSGYALHWWERIVNQRVRSGRPPVDTWRELK 2748
+L WE + F + + R +EF+ +A WW V R P TW +K
Sbjct: 171 YLTWELAIVQKFACHDFPENKRVRAATSEFTDFASIWWSEFV--RSNPNNTP-QTWDAMK 227
Query: 2747 ALMRERFVPKHYYRELHYKLMTLKQGAKSVEEYRQELELYILRLNLEEDKDASMARFLSG 2568
+MR RFVP ++ R+L +KL L+QG KSVEEY Q L++ +LR L E+ DA MARF+ G
Sbjct: 228 RVMRARFVPSYHARDLLHKLQQLRQGNKSVEEYYQALQIGMLRCGLVENDDAGMARFMGG 287
Query: 2567 LNREIANQLELYPHTTYEDMCHLPNKIESQ-RKRSGMMRSSF---------------PNQ 2436
LNREI + L + + + HL K E + + R R++ P+
Sbjct: 288 LNREIQDILAYKEYNSINRLFHLACKAEREVQGRRASFRTNISAGCASSWTSSNAAAPST 347
Query: 2435 RQVATT------KPPTSNFKPWPKKEEDPRGTFQPPTKPKMDERGKIIYDSPKCFKCNGV 2274
R A + +P T+N P P E RG P+K +C +C G
Sbjct: 348 RAAAPSCSSNKLRPSTTNSTPCPS--EPTRGVAATPSKSSSSVASSGRTRDIQCLRCKGY 405
Query: 2273 GHYASSCPTKRALIFREDLNGWIXXXXXXXXXXXXXXXXXXXXE--HVDLNPLGSD--ED 2106
GH CP+ R +I R D + + H D + ++ E
Sbjct: 406 GHVRKDCPSTRVMIVRADGGYYFDSDLDEETYALLATNNAGEGDAPHQDEEHIRAEAAEH 465
Query: 2105 VLSLVTIRALSAQTFDDNMIEQRENIFYSKCKVEGRIANLIIDSGSCVNVASTYLVEKLK 1926
SLV R LSAQ + Q +F +KC ++ R ++IID GSC N+AS +VEKL
Sbjct: 466 YESLVVQRVLSAQ-MERAEQNQLHTLFQTKCVIKERSCHVIIDGGSCNNLASAEMVEKLA 524
Query: 1925 LPTTKHDKPYKLYWLNDSGEIKVLRQVVVPIEMGAYKDEILCDVVPMQACHLLLGSPWQF 1746
L T H +PY + WLN SG++KV R V V +G+Y D I CDVVPMQAC +LLG PWQF
Sbjct: 525 LSTQPHPQPYYIQWLNSSGKVKVTRLVRVHFAIGSYHDSINCDVVPMQACSMLLGRPWQF 584
Query: 1745 DRKSLHNGEKNTYSFVKDGRTFTMNPLTPQQVRNEQXXXXXXXXXXXXXXXXXXXXXXXX 1566
D+ SLH G+ N YSFV +G+ ++P++P+ + ++
Sbjct: 585 DKDSLHFGKSNQYSFVHNGKKLVLHPMSPEVILKDELARASKQKNQEHTRSEHLIAANEL 644
Query: 1565 XXXXXXXXXVMXXXXXXXXXXXXXXXEMKEKNCVFAKPSEAIEAIERKEVVLLLYYRESF 1386
+ + +C A S+ E L +E+
Sbjct: 645 EKHKKKPTNSVQNNKNEIKL---------KGSCFIATKSDLDEVDTDTVFCYALVCKETL 695
Query: 1385 T*SKEHSPSFSSEILQVIEDYKDIFPDEMLGGLPPISGIERQIDFVPGEGL 1233
++ S + ++++Y DIFP E+ GLPPI GIE QID +PG L
Sbjct: 696 FPIEDTPISLRPPVTNLLQEYADIFPKEVPPGLPPIRGIEHQIDLIPGASL 746
Score = 272 bits (695), Expect(3) = 0.0
Identities = 123/195 (63%), Positives = 158/195 (81%)
Frame = -1
Query: 587 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 408
+AI WP P ++VRSF GL FYRRF+K+FST+A+PL ++ K+ F Q AF
Sbjct: 962 EAIHSWPVPTTITQVRSFLGLAGFYRRFVKDFSTIAAPLHELTKRNVTFTWAAAQRNAFD 1021
Query: 407 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYFSEKLNGAAVRYSTY 228
L +KL APLL LP+F KTFE+ECDASGIG+GGVL+Q+GKP+AYFSEKL+G ++ YSTY
Sbjct: 1022 TLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPSLNYSTY 1081
Query: 227 DKELYALIRTLKHWQHYLWPKEFVVHNDHEALKFLKGQHKLNKRHARWMKFIETFPYAIH 48
DKEL+AL+RTL+ WQHYLWPKEFV+H+DHE+LK ++ Q K N+RHA+W++FIE+FPY I
Sbjct: 1082 DKELFALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQAKHNRRHAKWVEFIESFPYVIK 1141
Query: 47 YKKGKENVVADALSR 3
+KKGKENV+ADALSR
Sbjct: 1142 HKKGKENVIADALSR 1156
>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 350 bits (897), Expect(3) = 0.0
Identities = 160/227 (70%), Positives = 194/227 (85%)
Frame = -2
Query: 1252 LSPGKVLPNRPAYRSPPKETKELKRQVEDLISKGYVRESMSPCAVPVLLVPKKDGTWRMC 1073
L PG LPNR YR+ P+ETKE++RQV +L+ KGYVRES+SPCAVPV+LVPKKDG+WRMC
Sbjct: 691 LIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMC 750
Query: 1072 IDCRAINNITIKYRHPIPRLDDLLDELHGSNLFSKIDLKSGYHQIRMREGDEWKTAFKTN 893
+DCRAINNITI+YRHPIPRLDD+LDEL GS +FSK++L+SGYHQI M+ GDEWKTAFKT
Sbjct: 751 VDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVELRSGYHQIHMKLGDEWKTAFKTK 810
Query: 892 FGLYEWMVMPFGLTNVPSTFMRLMNHVLRNFIGKFVVVYFDDILVYSKTYEMHVQHLREI 713
FGLYEW+VMPFGLTN PSTFMRLMN VLR FIGKFVVVYFDDIL+YSK+ H HLR +
Sbjct: 811 FGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAV 870
Query: 712 LNILRIEKLFANLDKCEFCLEKVTFLCYVVSSQGLQVDEGKVKQLRN 572
N LR +LF NL+KC FC ++V+FL YVV+ QG++VD+ KV+ +++
Sbjct: 871 FNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQS 917
Score = 274 bits (701), Expect(3) = 0.0
Identities = 125/195 (64%), Positives = 160/195 (82%)
Frame = -1
Query: 587 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 408
+AI+ WPTP+ S+VRSF GL FY RF+++FST+A+PL + KK F T QE AF
Sbjct: 913 EAIQSWPTPKTVSQVRSFLGLAGFYCRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFH 972
Query: 407 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYFSEKLNGAAVRYSTY 228
+L KL APLL LP+F KTFE+ECDASGIG+GGVL+Q+GK +AYFSEKL+G + YSTY
Sbjct: 973 MLKHKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKLVAYFSEKLSGPVLNYSTY 1032
Query: 227 DKELYALIRTLKHWQHYLWPKEFVVHNDHEALKFLKGQHKLNKRHARWMKFIETFPYAIH 48
DKELYAL+RTL+ WQHYLWPKEFV+H+DHE+LK ++ Q KLN+RHA+W++FIE+FPY I
Sbjct: 1033 DKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIK 1092
Query: 47 YKKGKENVVADALSR 3
+KKGKEN++A+ALSR
Sbjct: 1093 HKKGKENIIANALSR 1107
Score = 249 bits (637), Expect(3) = 0.0
Identities = 174/588 (29%), Positives = 259/588 (44%), Gaps = 23/588 (3%)
Frame = -1
Query: 2927 FLDWERQVENMFMLKICNKFLKARLVIAEFSGYALHWWERIVNQRVRSGRPPVDTWRELK 2748
+L WE V+ F + + R +EF+ +A WW + ++ TW LK
Sbjct: 169 YLSWEIAVDQKFACHEFPESTRVRAATSEFTDFASVWW---IEHGKKNPNNMPQTWDALK 225
Query: 2747 ALMRERFVPKHYYRELHYKLMTLKQGAKSVEEYRQELELYILRLNLEEDKDASMARFLSG 2568
+MR RFVP +Y R+L +L L+Q EE +DA+MARFL G
Sbjct: 226 RVMRARFVPSYYARDLLNRLQQLRQ---------------------EETEDAAMARFLGG 264
Query: 2567 LNREIANQLELYPHTTYEDMCHLPNKIE--------------SQRKRSGMMRSSFPNQRQ 2430
LNREI + ++ +T + HL K E S K S + P +
Sbjct: 265 LNREIYDIVDYKDYTNMTRLFHLACKAEREVQGRRASAKANFSAGKTSSWQTRTTPLAGR 324
Query: 2429 VAT--TKPPTSNFKPWPKKEEDPRGTFQP-PTKPKMDERGKIIYDSPKCFKCNGVGHYAS 2259
A+ + P TS P P ++ QP P+ M G++ +C +C G GH
Sbjct: 325 TASPSSTPTTSRAAPPPSSDKSATKAAQPAPSASSMASTGRM--RDVQCHRCKGFGHVQR 382
Query: 2258 SCPTKRALIFREDLNGWIXXXXXXXXXXXXXXXXXXXXEHVDLNP----LGSD--EDVLS 2097
CP+KR L+ + D +H D P +G+ + S
Sbjct: 383 DCPSKRVLVVKND------GEYSSASDFDDDTLALLAADHADNEPPEEHIGAAFADHYES 436
Query: 2096 LVTIRALSAQTFDDNMIEQRENIFYSKCKVEGRIANLIIDSGSCVNVASTYLVEKLKLPT 1917
L+ R LSAQ + QR +F +KC V+ R +IID GSC N+AS+ +VEKL L T
Sbjct: 437 LIVQRVLSAQ-MEKAEQNQRHTLFQTKCVVKERCCRMIIDGGSCNNLASSEMVEKLALST 495
Query: 1916 TKHDKPYKLYWLNDSGEIKVLRQVVVPIEMGAYKDEILCDVVPMQACHLLLGSPWQFDRK 1737
H Y + WLN+SG+ KV + V + +G Y D + CDVVPMQAC++LLG PWQFDR
Sbjct: 496 KPHPHSYYIQWLNNSGKAKVTKLVHINFAIGNYHDVVECDVVPMQACNILLGRPWQFDRD 555
Query: 1736 SLHNGEKNTYSFVKDGRTFTMNPLTPQQVRNEQXXXXXXXXXXXXXXXXXXXXXXXXXXX 1557
S+H+G N YSF+ + ++P++P+ + +
Sbjct: 556 SMHHGRSNQYSFLYHDKKIVLHPMSPEDILRDDVAKAAKSKCE----------------- 598
Query: 1556 XXXXXXVMXXXXXXXXXXXXXXXEMKEKNCVFAKPSEAIEAIERKEVVLLLYYRESFT*S 1377
+K K C+ A S+ E I V L +++
Sbjct: 599 --------SDKKAQSDGKKPETINLKPK-CLLATKSDINELIASPSVAYALVCKDALISL 649
Query: 1376 KEHSPSFSSEILQVIEDYKDIFPDEMLGGLPPISGIERQIDFVPGEGL 1233
+ S + ++++Y D+FP E+ GLPP+ GIE QID +PG L
Sbjct: 650 HDMQHSLPPAVANILQEYSDVFPKEVPPGLPPVRGIEHQIDLIPGASL 697
>emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group]
Length = 1667
Score = 347 bits (891), Expect(3) = 0.0
Identities = 160/227 (70%), Positives = 193/227 (85%)
Frame = -2
Query: 1252 LSPGKVLPNRPAYRSPPKETKELKRQVEDLISKGYVRESMSPCAVPVLLVPKKDGTWRMC 1073
L PG LPNR YR+ P+ETKE++RQV +L+ KGYVRES+SPCAV V+LVPKKDG+WRMC
Sbjct: 635 LIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVLVILVPKKDGSWRMC 694
Query: 1072 IDCRAINNITIKYRHPIPRLDDLLDELHGSNLFSKIDLKSGYHQIRMREGDEWKTAFKTN 893
+DCRAINNITI+YRHPIPRLDD+LDEL GS +FSK+DL+SGYHQIRM GDEWKTAFKT
Sbjct: 695 VDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVDLRSGYHQIRMNLGDEWKTAFKTK 754
Query: 892 FGLYEWMVMPFGLTNVPSTFMRLMNHVLRNFIGKFVVVYFDDILVYSKTYEMHVQHLREI 713
FGLYEW+VMPFGLTN P+TFMRLMN VLR FIGKFVVVYFDDIL+YSK+ H HLR +
Sbjct: 755 FGLYEWLVMPFGLTNAPTTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAV 814
Query: 712 LNILRIEKLFANLDKCEFCLEKVTFLCYVVSSQGLQVDEGKVKQLRN 572
N LR +LF NL+KC FC ++V+FL YVV+ QG++VD+ KV+ +++
Sbjct: 815 FNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQS 861
Score = 283 bits (723), Expect(3) = 0.0
Identities = 128/195 (65%), Positives = 162/195 (83%)
Frame = -1
Query: 587 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 408
+AI+ WPTP+ S+VRSF GL FYRRF+++FST+A+PL + KK F T QE AF
Sbjct: 857 EAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFH 916
Query: 407 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYFSEKLNGAAVRYSTY 228
+L +KL APLL LP+F KTFE+ECDASGIG+GGVL+Q+GKP+AYFSEKL+G + YSTY
Sbjct: 917 MLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPVLNYSTY 976
Query: 227 DKELYALIRTLKHWQHYLWPKEFVVHNDHEALKFLKGQHKLNKRHARWMKFIETFPYAIH 48
DKELYAL+RTL+ WQHYLWPKEFV+H+DHE+LK + Q KLN+RHA+W++FIE+FPY I
Sbjct: 977 DKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIHSQGKLNRRHAKWVEFIESFPYVIK 1036
Query: 47 YKKGKENVVADALSR 3
+KKGKEN++ADALSR
Sbjct: 1037 HKKGKENIIADALSR 1051
Score = 219 bits (558), Expect(3) = 0.0
Identities = 167/573 (29%), Positives = 244/573 (42%), Gaps = 8/573 (1%)
Frame = -1
Query: 2927 FLDWERQVENMFMLKICNKFLKARLVIAEFSGYALHWWERIVNQRVRSGRPPVDTWRELK 2748
+L WE V+ F + + R +EF+ +A WW + ++ TW LK
Sbjct: 169 YLSWEIAVDQKFACHEFPESTRVRAATSEFTDFASVWW---IEHGKKNPNNMPQTWDALK 225
Query: 2747 ALMRERFVPKHYYRELHYKLMTLKQGAKSVEEYRQELELYILRLNLEEDKDASMARFLSG 2568
+MR RFVP +Y R+L +L L+Q EE +D +MARFL G
Sbjct: 226 RVMRARFVPSYYARDLLNRLQQLRQ---------------------EETEDTAMARFLGG 264
Query: 2567 LNREIANQLELYPHTTYEDMCHLPNKIESQRKRSGMMRSSFPNQRQVA-TTKPPTSNFKP 2391
LNREI + ++ +T + HL K S + R+ + P R V+ ++ P TS P
Sbjct: 265 LNREIYDIVDYKDYTNMTRLFHLACKTSSWQTRT-----TPPAGRTVSPSSTPTTSRATP 319
Query: 2390 WPKKEEDPRGTFQP-PTKPKMDERGKIIYDSPKCFKCNGVGHYASSCPTKRALIFREDLN 2214
P ++ QP P+ M G++ +C +C G GH CP+KR L+ + D
Sbjct: 320 PPSSDKSATKAAQPAPSASSMASTGRM--RDVQCHRCKGFGHVQRDCPSKRVLVVKND-- 375
Query: 2213 GWIXXXXXXXXXXXXXXXXXXXXEHVDLNP----LGSD--EDVLSLVTIRALSAQTFDDN 2052
+H D P +G+ + SL+ LSAQ +
Sbjct: 376 ----GEYSSAIDFDDDTLALLAADHADNEPPEEHIGAAFADHYESLIMQHVLSAQ-MEKA 430
Query: 2051 MIEQRENIFYSKCKVEGRIANLIIDSGSCVNVASTYLVEKLKLPTTKHDKPYKLYWLNDS 1872
QR +F +KC V+ R +IID GSC N+AS+ +VEKL L T H PY + WLN+S
Sbjct: 431 EQNQRHTLFQTKCVVKERCCRMIIDGGSCNNLASSEMVEKLALSTKPHPHPYYIQWLNNS 490
Query: 1871 GEIKVLRQVVVPIEMGAYKDEILCDVVPMQACHLLLGSPWQFDRKSLHNGEKNTYSFVKD 1692
G+ KV + V + +G Y D + CDVVPMQAC++LLG PWQFDR S+H+G+K
Sbjct: 491 GKAKVTKLVHINFAIGNYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGKK-------- 542
Query: 1691 GRTFTMNPLTPQQVRNEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMXXXXXXX 1512
++P++P+ + +
Sbjct: 543 ---IVLHPMSPEDILRDDVAKAAKSKCE-------------------------SDKKAQS 574
Query: 1511 XXXXXXXXEMKEKNCVFAKPSEAIEAIERKEVVLLLYYRESFT*SKEHSPSFSSEILQVI 1332
+K K C+ A S+ E I V L Y + F
Sbjct: 575 DGKKPETINLKPK-CLLATKSDINELIASPSVAYALEYSDVF------------------ 615
Query: 1331 EDYKDIFPDEMLGGLPPISGIERQIDFVPGEGL 1233
P E+ GLPP+ GIE QID +PG L
Sbjct: 616 -------PKEVPPGLPPVRGIEHQIDLIPGASL 641
>emb|CAE02411.2| OSJNBa0024J22.19 [Oryza sativa Japonica Group]
Length = 1667
Score = 347 bits (891), Expect(3) = 0.0
Identities = 160/227 (70%), Positives = 193/227 (85%)
Frame = -2
Query: 1252 LSPGKVLPNRPAYRSPPKETKELKRQVEDLISKGYVRESMSPCAVPVLLVPKKDGTWRMC 1073
L PG LPNR YR+ P+ETKE++RQV +L+ KGYVRES+SPCAV V+LVPKKDG+WRMC
Sbjct: 635 LIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVLVILVPKKDGSWRMC 694
Query: 1072 IDCRAINNITIKYRHPIPRLDDLLDELHGSNLFSKIDLKSGYHQIRMREGDEWKTAFKTN 893
+DCRAINNITI+YRHPIPRLDD+LDEL GS +FSK+DL+SGYHQIRM GDEWKTAFKT
Sbjct: 695 VDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVDLRSGYHQIRMNLGDEWKTAFKTK 754
Query: 892 FGLYEWMVMPFGLTNVPSTFMRLMNHVLRNFIGKFVVVYFDDILVYSKTYEMHVQHLREI 713
FGLYEW+VMPFGLTN P+TFMRLMN VLR FIGKFVVVYFDDIL+YSK+ H HLR +
Sbjct: 755 FGLYEWLVMPFGLTNAPTTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAV 814
Query: 712 LNILRIEKLFANLDKCEFCLEKVTFLCYVVSSQGLQVDEGKVKQLRN 572
N LR +LF NL+KC FC ++V+FL YVV+ QG++VD+ KV+ +++
Sbjct: 815 FNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQS 861
Score = 283 bits (723), Expect(3) = 0.0
Identities = 128/195 (65%), Positives = 162/195 (83%)
Frame = -1
Query: 587 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 408
+AI+ WPTP+ S+VRSF GL FYRRF+++FST+A+PL + KK F T QE AF
Sbjct: 857 EAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFH 916
Query: 407 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYFSEKLNGAAVRYSTY 228
+L +KL APLL LP+F KTFE+ECDASGIG+GGVL+Q+GKP+AYFSEKL+G + YSTY
Sbjct: 917 MLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPVLNYSTY 976
Query: 227 DKELYALIRTLKHWQHYLWPKEFVVHNDHEALKFLKGQHKLNKRHARWMKFIETFPYAIH 48
DKELYAL+RTL+ WQHYLWPKEFV+H+DHE+LK + Q KLN+RHA+W++FIE+FPY I
Sbjct: 977 DKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIHSQGKLNRRHAKWVEFIESFPYVIK 1036
Query: 47 YKKGKENVVADALSR 3
+KKGKEN++ADALSR
Sbjct: 1037 HKKGKENIIADALSR 1051
Score = 219 bits (558), Expect(3) = 0.0
Identities = 167/573 (29%), Positives = 244/573 (42%), Gaps = 8/573 (1%)
Frame = -1
Query: 2927 FLDWERQVENMFMLKICNKFLKARLVIAEFSGYALHWWERIVNQRVRSGRPPVDTWRELK 2748
+L WE V+ F + + R +EF+ +A WW + ++ TW LK
Sbjct: 169 YLSWEIAVDQKFACHEFPESTRVRAATSEFTDFASVWW---IEHGKKNPNNMPQTWDALK 225
Query: 2747 ALMRERFVPKHYYRELHYKLMTLKQGAKSVEEYRQELELYILRLNLEEDKDASMARFLSG 2568
+MR RFVP +Y R+L +L L+Q EE +D +MARFL G
Sbjct: 226 RVMRARFVPSYYARDLLNRLQQLRQ---------------------EETEDTAMARFLGG 264
Query: 2567 LNREIANQLELYPHTTYEDMCHLPNKIESQRKRSGMMRSSFPNQRQVA-TTKPPTSNFKP 2391
LNREI + ++ +T + HL K S + R+ + P R V+ ++ P TS P
Sbjct: 265 LNREIYDIVDYKDYTNMTRLFHLACKTSSWQTRT-----TPPAGRTVSPSSTPTTSRAAP 319
Query: 2390 WPKKEEDPRGTFQP-PTKPKMDERGKIIYDSPKCFKCNGVGHYASSCPTKRALIFREDLN 2214
P ++ QP P+ M G++ +C +C G GH CP+KR L+ + D
Sbjct: 320 PPSSDKSATKAAQPAPSASSMASTGRM--RDVQCHRCKGFGHVQRDCPSKRVLVVKND-- 375
Query: 2213 GWIXXXXXXXXXXXXXXXXXXXXEHVDLNP----LGSD--EDVLSLVTIRALSAQTFDDN 2052
+H D P +G+ + SL+ LSAQ +
Sbjct: 376 ----GEYSSAIDFDDDTLALLAADHADNEPPEEHIGAAFADHYESLIMQHVLSAQ-MEKA 430
Query: 2051 MIEQRENIFYSKCKVEGRIANLIIDSGSCVNVASTYLVEKLKLPTTKHDKPYKLYWLNDS 1872
QR +F +KC V+ R +IID GSC N+AS+ +VEKL L T H PY + WLN+S
Sbjct: 431 EQNQRHTLFQTKCVVKERCCRMIIDGGSCNNLASSEMVEKLALSTKPHPHPYYIQWLNNS 490
Query: 1871 GEIKVLRQVVVPIEMGAYKDEILCDVVPMQACHLLLGSPWQFDRKSLHNGEKNTYSFVKD 1692
G+ KV + V + +G Y D + CDVVPMQAC++LLG PWQFDR S+H+G+K
Sbjct: 491 GKAKVTKLVHINFAIGNYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGKK-------- 542
Query: 1691 GRTFTMNPLTPQQVRNEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMXXXXXXX 1512
++P++P+ + +
Sbjct: 543 ---IVLHPMSPEDILRDDVAKAAKSKCE-------------------------SDKKAQS 574
Query: 1511 XXXXXXXXEMKEKNCVFAKPSEAIEAIERKEVVLLLYYRESFT*SKEHSPSFSSEILQVI 1332
+K K C+ A S+ E I V L Y + F
Sbjct: 575 DGKKPETINLKPK-CLLATKSDINELIASPSVAYALEYSDVF------------------ 615
Query: 1331 EDYKDIFPDEMLGGLPPISGIERQIDFVPGEGL 1233
P E+ GLPP+ GIE QID +PG L
Sbjct: 616 -------PKEVPPGLPPVRGIEHQIDLIPGASL 641
>emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group]
Length = 1431
Score = 283 bits (725), Expect(3) = 0.0
Identities = 128/195 (65%), Positives = 162/195 (83%)
Frame = -1
Query: 587 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 408
+AI+ WPTP+ S+VRSF GL FYRRF+++FST+A+PL + KK F T QE AF
Sbjct: 879 EAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFH 938
Query: 407 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYFSEKLNGAAVRYSTY 228
+L +KL APLL LP+F KTFE+ECDASGIG+GGVL+Q+GKP+AYFSEKL G + YSTY
Sbjct: 939 MLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLTGPVLNYSTY 998
Query: 227 DKELYALIRTLKHWQHYLWPKEFVVHNDHEALKFLKGQHKLNKRHARWMKFIETFPYAIH 48
DKELYAL+RTL+ WQHYLWPKEFV+H+DHE+LK ++ Q KLN+RHA+W++FIE+FPY I
Sbjct: 999 DKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIK 1058
Query: 47 YKKGKENVVADALSR 3
+KKGKEN++ADALSR
Sbjct: 1059 HKKGKENIIADALSR 1073
Score = 276 bits (707), Expect(3) = 0.0
Identities = 136/227 (59%), Positives = 166/227 (73%)
Frame = -2
Query: 1252 LSPGKVLPNRPAYRSPPKETKELKRQVEDLISKGYVRESMSPCAVPVLLVPKKDGTWRMC 1073
L PG LPNR YR+ P+ETKE++RQV +L+ KG
Sbjct: 687 LIPGASLPNRAPYRTNPEETKEIQRQVHELLDKG-------------------------- 720
Query: 1072 IDCRAINNITIKYRHPIPRLDDLLDELHGSNLFSKIDLKSGYHQIRMREGDEWKTAFKTN 893
AINNITI+YRHPIPRLDD+LDEL GS +FSK+DL+SGYHQIRM+ GDEWKTAFKT
Sbjct: 721 ----AINNITIRYRHPIPRLDDMLDELSGSIVFSKVDLRSGYHQIRMKLGDEWKTAFKTK 776
Query: 892 FGLYEWMVMPFGLTNVPSTFMRLMNHVLRNFIGKFVVVYFDDILVYSKTYEMHVQHLREI 713
FGLYEW+VMPFGLTN PSTFMRLMN VLR FIGKFVVVYFDDIL+YSK+ H +HLR +
Sbjct: 777 FGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFKHLRAV 836
Query: 712 LNILRIEKLFANLDKCEFCLEKVTFLCYVVSSQGLQVDEGKVKQLRN 572
N LR +LF NL+KC FC ++V+FL YVV+ QG++VD+ KV+ +++
Sbjct: 837 FNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQS 883
Score = 267 bits (683), Expect(3) = 0.0
Identities = 185/588 (31%), Positives = 266/588 (45%), Gaps = 23/588 (3%)
Frame = -1
Query: 2927 FLDWERQVENMFMLKICNKFLKARLVIAEFSGYALHWWERIVNQRVRSGRPPVDTWRELK 2748
+L WE V+ F + + R +EF+ +A WW + ++ TW LK
Sbjct: 169 YLSWEIAVDQKFACHEFPENTRVRAATSEFTDFASVWW---IEHGKKNPNNMPQTWDALK 225
Query: 2747 ALMRERFVPKHYYRELHYKLMTLKQGAKSVEEYRQELELYILRLNLEEDKDASMARFLSG 2568
+MR RFVP +Y R+L +L L+QGAKSVEEY QEL++ +LR NLEE +DA+MARFL G
Sbjct: 226 RVMRARFVPSYYARDLLNRLQQLRQGAKSVEEYYQELQMGLLRCNLEETEDAAMARFLGG 285
Query: 2567 LNREIANQLELYPHTTYEDMCHLPNKIESQ---------------RKRSGMMRSSFPNQR 2433
LNREI + ++ +T + HL K E + + S R++ P R
Sbjct: 286 LNREIYDIVDYKDYTNMTRLFHLACKAEREVQGRRASAKANFSAGKTSSWQTRTTPPAGR 345
Query: 2432 QVA-TTKPPTSNFKPWPKKEEDPRGTFQP-PTKPKMDERGKIIYDSPKCFKCNGVGHYAS 2259
+ ++ P TS P P ++ QP P+ M G++ +C +C G GH
Sbjct: 346 TTSPSSTPTTSRAAPPPSGDKSAIKAAQPAPSASSMASTGRM--RDVQCHRCKGFGHVQR 403
Query: 2258 SCPTKRALIFREDLNGWIXXXXXXXXXXXXXXXXXXXXEHVDLNP----LGSD--EDVLS 2097
CP+KR L+ + D +H D P +G+ + S
Sbjct: 404 DCPSKRVLVVKND------GEYSSASDFDDDTLALLAADHADNEPPEEHIGAAFADHYES 457
Query: 2096 LVTIRALSAQTFDDNMIEQRENIFYSKCKVEGRIANLIIDSGSCVNVASTYLVEKLKLPT 1917
L+ R LSAQ + QR +F +KC V+ R +IID GSC N+AS+ +VEKL L T
Sbjct: 458 LIVQRVLSAQ-MEKAEQNQRHTLFQTKCVVKERCCRMIIDGGSCNNLASSEMVEKLALST 516
Query: 1916 TKHDKPYKLYWLNDSGEIKVLRQVVVPIEMGAYKDEILCDVVPMQACHLLLGSPWQFDRK 1737
H PY + WLN+SG+ KV V + +G Y D + CDV+PMQAC++LLG PWQFDR
Sbjct: 517 KPHPHPYYIQWLNNSGKAKVTNLVHINFAIGNYHDVVECDVLPMQACNILLGRPWQFDRD 576
Query: 1736 SLHNGEKNTYSFVKDGRTFTMNPLTPQQVRNEQXXXXXXXXXXXXXXXXXXXXXXXXXXX 1557
S+H+G N YSF+ + ++P++P+ + +
Sbjct: 577 SMHHGRSNQYSFLYHDKKIVLHPMSPEDILRDDVAKAAKSKCESDKKAQSDGKKPETINL 636
Query: 1556 XXXXXXVMXXXXXXXXXXXXXXXEMKEKNCVFAKPSEAIEAIERKEVVLLLYYRESFT*S 1377
+ C+ A S+ E I V L Y + F
Sbjct: 637 --------------------------KPRCLLATKSDINELIASPSVAYALEYSDVF--P 668
Query: 1376 KEHSPSFSSEILQVIEDYKDIFPDEMLGGLPPISGIERQIDFVPGEGL 1233
KE P GLPP+ GIE QID +PG L
Sbjct: 669 KEVPP-----------------------GLPPVRGIEHQIDLIPGASL 693
>gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|108864301|gb|ABA93040.2|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1748
Score = 352 bits (902), Expect(3) = 0.0
Identities = 161/227 (70%), Positives = 194/227 (85%)
Frame = -2
Query: 1252 LSPGKVLPNRPAYRSPPKETKELKRQVEDLISKGYVRESMSPCAVPVLLVPKKDGTWRMC 1073
L PG LPNR YR+ P+ETKE++RQV +L+ KGYVRES+SPCAVPV+LVPKKDG+WRMC
Sbjct: 1054 LIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMC 1113
Query: 1072 IDCRAINNITIKYRHPIPRLDDLLDELHGSNLFSKIDLKSGYHQIRMREGDEWKTAFKTN 893
+DCRAINNITI+YRHPIPRLDD+LDEL GS +FSK+DL+SGYHQIRM+ GDEWKT FKT
Sbjct: 1114 VDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVDLRSGYHQIRMKLGDEWKTTFKTK 1173
Query: 892 FGLYEWMVMPFGLTNVPSTFMRLMNHVLRNFIGKFVVVYFDDILVYSKTYEMHVQHLREI 713
FGLYEW+VMPFGLTN PSTFMRLMN VLR FIGKFVVVYFDDIL+YSK+ H HLR +
Sbjct: 1174 FGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAV 1233
Query: 712 LNILRIEKLFANLDKCEFCLEKVTFLCYVVSSQGLQVDEGKVKQLRN 572
N LR +LF NL+KC FC ++V+FL YVV+ QG++VD+ KV+ +++
Sbjct: 1234 FNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQS 1280
Score = 270 bits (691), Expect(3) = 0.0
Identities = 185/588 (31%), Positives = 268/588 (45%), Gaps = 23/588 (3%)
Frame = -1
Query: 2927 FLDWERQVENMFMLKICNKFLKARLVIAEFSGYALHWWERIVNQRVRSGRPPVDTWRELK 2748
FL WE V+ F + + R +EF+ +A WW + ++ TW LK
Sbjct: 536 FLSWEIAVDQKFAYHEFPENTRVRAATSEFTDFASVWW---IEHGKKNPNNMPQTWDALK 592
Query: 2747 ALMRERFVPKHYYRELHYKLMTLKQGAKSVEEYRQELELYILRLNLEEDKDASMARFLSG 2568
+MR RFVP +Y R+L +L L+QGAKSVEEY QEL++ +LR NLEE +D +MARFL G
Sbjct: 593 RVMRARFVPSYYARDLLNRLQQLRQGAKSVEEYYQELQMGLLRCNLEETEDTAMARFLGG 652
Query: 2567 LNREIANQLELYPHTTYEDMCHLPNKIESQ---------------RKRSGMMRSSFPNQR 2433
LNREI + ++ +T + HL K E + + S R++ P R
Sbjct: 653 LNREIYDIVDYKDYTNMTRLFHLACKAEREVQGRRASAKANFSAGKTSSWQTRTTPPAGR 712
Query: 2432 QVA-TTKPPTSNFKPWPKKEEDPRGTFQP-PTKPKMDERGKIIYDSPKCFKCNGVGHYAS 2259
+ ++ P TS P P ++ QP P+ M G++ +C +C G GH
Sbjct: 713 TASPSSTPTTSRAAPPPSSDKSVTKAAQPAPSASSMVSTGRM--RDVQCHRCKGFGHVQR 770
Query: 2258 SCPTKRALIFREDLNGWIXXXXXXXXXXXXXXXXXXXXEHVDLNP----LGSD--EDVLS 2097
CP+KR L+ + D +H D P +G+ + S
Sbjct: 771 DCPSKRVLVVKND------GEYSSASDFDDDTLALLAADHADNEPPEEHIGAAFADHYES 824
Query: 2096 LVTIRALSAQTFDDNMIEQRENIFYSKCKVEGRIANLIIDSGSCVNVASTYLVEKLKLPT 1917
L+ R LSAQ + QR +F +KC ++ R +IID GSC N+AS+ +VEKL L T
Sbjct: 825 LIVQRVLSAQ-MEKAEQNQRHTLFQTKCVLKERCCRMIIDGGSCNNLASSEMVEKLALST 883
Query: 1916 TKHDKPYKLYWLNDSGEIKVLRQVVVPIEMGAYKDEILCDVVPMQACHLLLGSPWQFDRK 1737
H PY + WLN+SG++KV + V + +G Y D + CDVVPMQAC++LLG PWQFDR
Sbjct: 884 KPHPHPYYIQWLNNSGKVKVTKLVHINFAIGNYHDVVECDVVPMQACNILLGRPWQFDRD 943
Query: 1736 SLHNGEKNTYSFVKDGRTFTMNPLTPQQVRNEQXXXXXXXXXXXXXXXXXXXXXXXXXXX 1557
S+H+G N YSF+ + ++P++ + + +
Sbjct: 944 SMHHGRSNQYSFLYHDKKIVLHPMSSEDILRDDVAKAAKSKCE----------------- 986
Query: 1556 XXXXXXVMXXXXXXXXXXXXXXXEMKEKNCVFAKPSEAIEAIERKEVVLLLYYRESFT*S 1377
+K K C+ A S+ E I V L Y + F
Sbjct: 987 --------SDKKAQSDGKKPETINLKPK-CLLATKSDITELIASPSVAYALEYSDVF--- 1034
Query: 1376 KEHSPSFSSEILQVIEDYKDIFPDEMLGGLPPISGIERQIDFVPGEGL 1233
P E+ GLPP+ GIE QID +PG L
Sbjct: 1035 ----------------------PKEVPPGLPPVRGIEHQIDLIPGASL 1060
Score = 202 bits (514), Expect(3) = 0.0
Identities = 99/195 (50%), Positives = 128/195 (65%)
Frame = -1
Query: 587 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 408
+AI+ WPTP+ S+VRSF GL FYRRF+++FST+A+PL + KK F T QE AF
Sbjct: 1276 EAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFH 1335
Query: 407 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYFSEKLNGAAVRYSTY 228
+L +KL APLL LP+F KTFE+ECDASGIG+G
Sbjct: 1336 MLKDKLTHAPLLQLPDFNKTFELECDASGIGLG--------------------------- 1368
Query: 227 DKELYALIRTLKHWQHYLWPKEFVVHNDHEALKFLKGQHKLNKRHARWMKFIETFPYAIH 48
+ WQHYLWPKEFV+H+DHE+LK ++ Q KLN+RHA+W++FIE+FPY I
Sbjct: 1369 -----------ETWQHYLWPKEFVIHSDHESLKHIRIQGKLNRRHAKWVEFIESFPYVIK 1417
Query: 47 YKKGKENVVADALSR 3
+KKGKEN++ADALSR
Sbjct: 1418 HKKGKENIIADALSR 1432
>gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
Length = 1739
Score = 352 bits (902), Expect(3) = 0.0
Identities = 161/227 (70%), Positives = 194/227 (85%)
Frame = -2
Query: 1252 LSPGKVLPNRPAYRSPPKETKELKRQVEDLISKGYVRESMSPCAVPVLLVPKKDGTWRMC 1073
L PG LPNR YR+ P+ETKE++RQV +L+ KGYVRES+SPCAVPV+LVPKKDG+WRMC
Sbjct: 1045 LIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMC 1104
Query: 1072 IDCRAINNITIKYRHPIPRLDDLLDELHGSNLFSKIDLKSGYHQIRMREGDEWKTAFKTN 893
+DCRAINNITI+YRHPIPRLDD+LDEL GS +FSK+DL+SGYHQIRM+ GDEWKT FKT
Sbjct: 1105 VDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVDLRSGYHQIRMKLGDEWKTTFKTK 1164
Query: 892 FGLYEWMVMPFGLTNVPSTFMRLMNHVLRNFIGKFVVVYFDDILVYSKTYEMHVQHLREI 713
FGLYEW+VMPFGLTN PSTFMRLMN VLR FIGKFVVVYFDDIL+YSK+ H HLR +
Sbjct: 1165 FGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAV 1224
Query: 712 LNILRIEKLFANLDKCEFCLEKVTFLCYVVSSQGLQVDEGKVKQLRN 572
N LR +LF NL+KC FC ++V+FL YVV+ QG++VD+ KV+ +++
Sbjct: 1225 FNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQS 1271
Score = 270 bits (691), Expect(3) = 0.0
Identities = 185/588 (31%), Positives = 268/588 (45%), Gaps = 23/588 (3%)
Frame = -1
Query: 2927 FLDWERQVENMFMLKICNKFLKARLVIAEFSGYALHWWERIVNQRVRSGRPPVDTWRELK 2748
FL WE V+ F + + R +EF+ +A WW + ++ TW LK
Sbjct: 527 FLSWEIAVDQKFAYHEFPENTRVRAATSEFTDFASVWW---IEHGKKNPNNMPQTWDALK 583
Query: 2747 ALMRERFVPKHYYRELHYKLMTLKQGAKSVEEYRQELELYILRLNLEEDKDASMARFLSG 2568
+MR RFVP +Y R+L +L L+QGAKSVEEY QEL++ +LR NLEE +D +MARFL G
Sbjct: 584 RVMRARFVPSYYARDLLNRLQQLRQGAKSVEEYYQELQMGLLRCNLEETEDTAMARFLGG 643
Query: 2567 LNREIANQLELYPHTTYEDMCHLPNKIESQ---------------RKRSGMMRSSFPNQR 2433
LNREI + ++ +T + HL K E + + S R++ P R
Sbjct: 644 LNREIYDIVDYKDYTNMTRLFHLACKAEREVQGRRASAKANFSAGKTSSWQTRTTPPAGR 703
Query: 2432 QVA-TTKPPTSNFKPWPKKEEDPRGTFQP-PTKPKMDERGKIIYDSPKCFKCNGVGHYAS 2259
+ ++ P TS P P ++ QP P+ M G++ +C +C G GH
Sbjct: 704 TASPSSTPTTSRAAPPPSSDKSVTKAAQPAPSASSMVSTGRM--RDVQCHRCKGFGHVQR 761
Query: 2258 SCPTKRALIFREDLNGWIXXXXXXXXXXXXXXXXXXXXEHVDLNP----LGSD--EDVLS 2097
CP+KR L+ + D +H D P +G+ + S
Sbjct: 762 DCPSKRVLVVKND------GEYSSASDFDDDTLALLAADHADNEPPEEHIGAAFADHYES 815
Query: 2096 LVTIRALSAQTFDDNMIEQRENIFYSKCKVEGRIANLIIDSGSCVNVASTYLVEKLKLPT 1917
L+ R LSAQ + QR +F +KC ++ R +IID GSC N+AS+ +VEKL L T
Sbjct: 816 LIVQRVLSAQ-MEKAEQNQRHTLFQTKCVLKERCCRMIIDGGSCNNLASSEMVEKLALST 874
Query: 1916 TKHDKPYKLYWLNDSGEIKVLRQVVVPIEMGAYKDEILCDVVPMQACHLLLGSPWQFDRK 1737
H PY + WLN+SG++KV + V + +G Y D + CDVVPMQAC++LLG PWQFDR
Sbjct: 875 KPHPHPYYIQWLNNSGKVKVTKLVHINFAIGNYHDVVECDVVPMQACNILLGRPWQFDRD 934
Query: 1736 SLHNGEKNTYSFVKDGRTFTMNPLTPQQVRNEQXXXXXXXXXXXXXXXXXXXXXXXXXXX 1557
S+H+G N YSF+ + ++P++ + + +
Sbjct: 935 SMHHGRSNQYSFLYHDKKIVLHPMSSEDILRDDVAKAAKSKCE----------------- 977
Query: 1556 XXXXXXVMXXXXXXXXXXXXXXXEMKEKNCVFAKPSEAIEAIERKEVVLLLYYRESFT*S 1377
+K K C+ A S+ E I V L Y + F
Sbjct: 978 --------SDKKAQSDGKKPETINLKPK-CLLATKSDITELIASPSVAYALEYSDVF--- 1025
Query: 1376 KEHSPSFSSEILQVIEDYKDIFPDEMLGGLPPISGIERQIDFVPGEGL 1233
P E+ GLPP+ GIE QID +PG L
Sbjct: 1026 ----------------------PKEVPPGLPPVRGIEHQIDLIPGASL 1051
Score = 202 bits (514), Expect(3) = 0.0
Identities = 99/195 (50%), Positives = 128/195 (65%)
Frame = -1
Query: 587 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 408
+AI+ WPTP+ S+VRSF GL FYRRF+++FST+A+PL + KK F T QE AF
Sbjct: 1267 EAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFH 1326
Query: 407 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYFSEKLNGAAVRYSTY 228
+L +KL APLL LP+F KTFE+ECDASGIG+G
Sbjct: 1327 MLKDKLTHAPLLQLPDFNKTFELECDASGIGLG--------------------------- 1359
Query: 227 DKELYALIRTLKHWQHYLWPKEFVVHNDHEALKFLKGQHKLNKRHARWMKFIETFPYAIH 48
+ WQHYLWPKEFV+H+DHE+LK ++ Q KLN+RHA+W++FIE+FPY I
Sbjct: 1360 -----------ETWQHYLWPKEFVIHSDHESLKHIRIQGKLNRRHAKWVEFIESFPYVIK 1408
Query: 47 YKKGKENVVADALSR 3
+KKGKEN++ADALSR
Sbjct: 1409 HKKGKENIIADALSR 1423
>ref|XP_004954917.1| PREDICTED: uncharacterized protein LOC101752491 [Setaria italica]
Length = 1295
Score = 362 bits (930), Expect(3) = 0.0
Identities = 162/227 (71%), Positives = 202/227 (88%)
Frame = -2
Query: 1252 LSPGKVLPNRPAYRSPPKETKELKRQVEDLISKGYVRESMSPCAVPVLLVPKKDGTWRMC 1073
L PG LPNRPAYR+ P+ETKE+++QV++L+ KGYVRES+SPCAVPVLLVPKKDG+WRMC
Sbjct: 781 LVPGASLPNRPAYRTNPEETKEIQQQVKELLDKGYVRESLSPCAVPVLLVPKKDGSWRMC 840
Query: 1072 IDCRAINNITIKYRHPIPRLDDLLDELHGSNLFSKIDLKSGYHQIRMREGDEWKTAFKTN 893
+DCRAIN IT++YRHPIPRLDD+LDEL GS +F+KIDL+SGYHQIRM+ GDEWKTAFKT
Sbjct: 841 VDCRAINAITVRYRHPIPRLDDMLDELSGSTIFTKIDLRSGYHQIRMKIGDEWKTAFKTK 900
Query: 892 FGLYEWMVMPFGLTNVPSTFMRLMNHVLRNFIGKFVVVYFDDILVYSKTYEMHVQHLREI 713
FGLYEW+VMPFGLTN PSTFMRLMNHVLR FIGKFVVVYFDDIL+YSK+++ H+ H+R++
Sbjct: 901 FGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGKFVVVYFDDILIYSKSFDEHLDHIRQV 960
Query: 712 LNILRIEKLFANLDKCEFCLEKVTFLCYVVSSQGLQVDEGKVKQLRN 572
L++LR +KL+ N+ KC FC + V FL +VVS+ G+QVDE K+K +++
Sbjct: 961 LSVLRDDKLYGNIAKCTFCTDHVVFLGFVVSADGIQVDEEKIKAIKD 1007
Score = 214 bits (546), Expect(3) = 0.0
Identities = 105/182 (57%), Positives = 126/182 (69%)
Frame = -1
Query: 587 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 408
+AIK+WPTP N S+ K FK +Q+QAF
Sbjct: 1003 KAIKDWPTPTNVSQ------------------------------KDVPFKWGDEQDQAFN 1032
Query: 407 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYFSEKLNGAAVRYSTY 228
L KLC APLL LPNF KTFE+ECDASGIGIGGVL+Q+GKP+AYFSEKLNG + YS Y
Sbjct: 1033 ELKAKLCEAPLLQLPNFGKTFEIECDASGIGIGGVLLQEGKPVAYFSEKLNGPHLNYSVY 1092
Query: 227 DKELYALIRTLKHWQHYLWPKEFVVHNDHEALKFLKGQHKLNKRHARWMKFIETFPYAIH 48
DKELYAL+R L+ WQHYL PKEFV+H+DHEALK+LK Q KLN+RHA+W++FIETFPY +
Sbjct: 1093 DKELYALVRVLEVWQHYLLPKEFVIHSDHEALKYLKSQGKLNRRHAKWIEFIETFPYVVK 1152
Query: 47 YK 42
+K
Sbjct: 1153 HK 1154
Score = 181 bits (460), Expect(3) = 0.0
Identities = 105/301 (34%), Positives = 150/301 (49%)
Frame = -1
Query: 2135 DLNPLGSDEDVLSLVTIRALSAQTFDDNMIEQRENIFYSKCKVEGRIANLIIDSGSCVNV 1956
DL P + SLV R LS Q F QR N+F S+CKV+G++ IID GSC N+
Sbjct: 509 DLEPSTMNTPSPSLVVRRVLSTQ-FVAAEQGQRHNLFQSRCKVKGQVCRFIIDGGSCNNI 567
Query: 1955 ASTYLVEKLKLPTTKHDKPYKLYWLNDSGEIKVLRQVVVPIEMGAYKDEILCDVVPMQAC 1776
S LVEKL L +H PY + WLN+SG +KV + + +G Y E+ CD+VPMQAC
Sbjct: 568 VSALLVEKLGLQPRRHPHPYHMQWLNNSGTVKVSAMIRLTFSIGDYHGEVDCDIVPMQAC 627
Query: 1775 HLLLGSPWQFDRKSLHNGEKNTYSFVKDGRTFTMNPLTPQQVRNEQXXXXXXXXXXXXXX 1596
HLLLG PWQFD S+H G N Y+F+ + + + PL+P+++
Sbjct: 628 HLLLGRPWQFDVDSVHFGRSNKYTFIANDKKVVLVPLSPEEIHASDVARMKREESEKRKL 687
Query: 1595 XXXXXXXXXXXXXXXXXXXVMXXXXXXXXXXXXXXXEMKEKNCVFAKPSEAIEAIERKEV 1416
++++ C+F + R
Sbjct: 688 SEAPNTSKGE-----------TPTPSSHIKPHSTSKQLRQNECLF---------VSRTPF 727
Query: 1415 VLLLYYRESFT*SKEHSPSFSSEILQVIEDYKDIFPDEMLGGLPPISGIERQIDFVPGEG 1236
+LL ++E + + S S S +L +++D+KD+FPDE+ GLPP+ GIE QID VPG
Sbjct: 728 FVLL-HKEVLLSTTDLSSSLPSVVLDLLQDFKDVFPDEVPAGLPPLRGIEHQIDLVPGAS 786
Query: 1235 L 1233
L
Sbjct: 787 L 787
Score = 150 bits (379), Expect = 4e-33
Identities = 86/261 (32%), Positives = 136/261 (52%), Gaps = 25/261 (9%)
Frame = -1
Query: 2927 FLDWERQVENMFMLKICNKFLKARLVIAEFSGYALHWWERIVNQRVRSGRPPVDTWRELK 2748
+ +WE +VE +F L KA+L EF GYA+ WW ++ + R G + TW ++K
Sbjct: 181 YFEWETKVEQIFDLYEYPAEKKAKLAAIEFKGYAITWWNQVRTEYHRVGHDRI-TWEDMK 239
Query: 2747 ALMRERFVPKHYYRELHYKLMTLKQGAKSVEEYRQELELYILRLNLEEDKDASMARFLSG 2568
MR RFVP +Y R+LH KL L QG +SV+EY QELE+ +LR + ED++++MARFL G
Sbjct: 240 REMRRRFVPAYYSRDLHLKLKRLVQGTRSVDEYFQELEMCLLRTGITEDEESTMARFLVG 299
Query: 2567 LNREIANQLELYPHTTYEDMCHLPNKIESQRKRSGMMRSSFPNQRQVATTKPPTSNFKPW 2388
LN+ IA+++++ +TT ++ H + E Q S +SF N W
Sbjct: 300 LNKPIADKVDMTNYTTLTELVHFAKRAERQLAMSYKHNASF-----------SPKNSTSW 348
Query: 2387 PKKEED----PRGTFQPPTK------PKMDERGKIIYDSP---------------KCFKC 2283
P+ ++ + +F+ T+ ++D +GK + + +CFKC
Sbjct: 349 PQSQQQGAATSKSSFRGDTRSASTSSKQLDVKGKAVNSNHSNSSSKATQRKTSKIECFKC 408
Query: 2282 NGVGHYASSCPTKRALIFRED 2220
G GH + CP +R +I D
Sbjct: 409 GGHGHKQAECPNRRTIIALAD 429
>ref|XP_004980495.1| PREDICTED: uncharacterized protein LOC101772114 [Setaria italica]
Length = 1246
Score = 358 bits (918), Expect(3) = 0.0
Identities = 160/227 (70%), Positives = 200/227 (88%)
Frame = -2
Query: 1252 LSPGKVLPNRPAYRSPPKETKELKRQVEDLISKGYVRESMSPCAVPVLLVPKKDGTWRMC 1073
L PG LPNRPAYR+ P+ETKE+++QV++L+ KGYVRES+SPCAVPVLLVPKKDG+WRMC
Sbjct: 658 LVPGASLPNRPAYRTNPEETKEIQQQVKELLDKGYVRESLSPCAVPVLLVPKKDGSWRMC 717
Query: 1072 IDCRAINNITIKYRHPIPRLDDLLDELHGSNLFSKIDLKSGYHQIRMREGDEWKTAFKTN 893
+DCRAIN IT++YRHPIPRLDD+LDEL GS +F+KIDL+SGYHQIRM+ GDEWKT FKT
Sbjct: 718 VDCRAINAITVRYRHPIPRLDDMLDELSGSTIFTKIDLRSGYHQIRMKIGDEWKTTFKTK 777
Query: 892 FGLYEWMVMPFGLTNVPSTFMRLMNHVLRNFIGKFVVVYFDDILVYSKTYEMHVQHLREI 713
FGLYEW+VMP GLTN PSTFMRLMNHVLR FIGKFVVVYFDDIL+YSK+++ H+ H+R++
Sbjct: 778 FGLYEWLVMPSGLTNAPSTFMRLMNHVLRAFIGKFVVVYFDDILIYSKSFDEHLDHIRQV 837
Query: 712 LNILRIEKLFANLDKCEFCLEKVTFLCYVVSSQGLQVDEGKVKQLRN 572
L++LR +KL+ N+ KC FC + V FL +VVS+ G+QVDE K+K +++
Sbjct: 838 LSVLRDDKLYGNIAKCTFCTDHVVFLGFVVSADGIQVDEEKIKAIKD 884
Score = 213 bits (541), Expect(3) = 0.0
Identities = 104/182 (57%), Positives = 126/182 (69%)
Frame = -1
Query: 587 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 408
+AIK+WPTP N S+ K FK +Q+QAF
Sbjct: 880 KAIKDWPTPTNVSQ------------------------------KDVPFKWGDEQDQAFN 909
Query: 407 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYFSEKLNGAAVRYSTY 228
L KLC APLL LP+F KTFE+ECDASGIGIGGVL+Q+GKP+AYFSEKLNG + YS Y
Sbjct: 910 ELKAKLCEAPLLQLPDFGKTFEIECDASGIGIGGVLLQEGKPVAYFSEKLNGPHLNYSVY 969
Query: 227 DKELYALIRTLKHWQHYLWPKEFVVHNDHEALKFLKGQHKLNKRHARWMKFIETFPYAIH 48
DKELYAL+R L+ WQHYL PKEFV+H+DHEALK+LK Q KLN+RHA+W++FIETFPY +
Sbjct: 970 DKELYALVRVLEVWQHYLLPKEFVIHSDHEALKYLKSQGKLNRRHAKWIEFIETFPYVVK 1029
Query: 47 YK 42
+K
Sbjct: 1030 HK 1031
Score = 181 bits (459), Expect(3) = 0.0
Identities = 102/301 (33%), Positives = 147/301 (48%)
Frame = -1
Query: 2135 DLNPLGSDEDVLSLVTIRALSAQTFDDNMIEQRENIFYSKCKVEGRIANLIIDSGSCVNV 1956
DL P + SLV R LS Q F QR N+F +CKV+G++ IID GSC N+
Sbjct: 376 DLEPSTMNTLSPSLVVRRVLSTQ-FVAAEQGQRHNLFQFRCKVKGQVCRFIIDGGSCNNI 434
Query: 1955 ASTYLVEKLKLPTTKHDKPYKLYWLNDSGEIKVLRQVVVPIEMGAYKDEILCDVVPMQAC 1776
S L+EKL L +H PY + WLN+SG +KV + + +G Y E+ CD+VPMQAC
Sbjct: 435 VSALLLEKLGLQPRRHPHPYHMQWLNNSGTVKVSAMIRLSFSIGDYHGEVDCDIVPMQAC 494
Query: 1775 HLLLGSPWQFDRKSLHNGEKNTYSFVKDGRTFTMNPLTPQQVRNEQXXXXXXXXXXXXXX 1596
HLLLG PWQFD S+H G N Y+F+ + + + PL+P+++
Sbjct: 495 HLLLGRPWQFDVDSVHFGRSNKYTFIANDKKVVLVPLSPEEIHASDVARMKREESEKRKL 554
Query: 1595 XXXXXXXXXXXXXXXXXXXVMXXXXXXXXXXXXXXXEMKEKNCVFAKPSEAIEAIERKEV 1416
++++ C+F S E
Sbjct: 555 SEAPNTSKGE-----------TPTPSSHIKPHSTSKQLRQNECLFVSRSALREVKNTTAP 603
Query: 1415 VLLLYYRESFT*SKEHSPSFSSEILQVIEDYKDIFPDEMLGGLPPISGIERQIDFVPGEG 1236
+L ++E + + S S +L +++D+KD+FPDE+ GLPP+ GIE QID VPG
Sbjct: 604 FFVLLHKEVLLSTTDLPSSLPSVVLDLLQDFKDVFPDEVPAGLPPLRGIEHQIDLVPGAS 663
Query: 1235 L 1233
L
Sbjct: 664 L 664
Score = 84.0 bits (206), Expect = 4e-13
Identities = 48/128 (37%), Positives = 68/128 (53%)
Frame = -1
Query: 2927 FLDWERQVENMFMLKICNKFLKARLVIAEFSGYALHWWERIVNQRVRSGRPPVDTWRELK 2748
+ +WE +VE F L KA+L EF YA+ WW +I + R G + TW ++K
Sbjct: 181 YFEWETKVEQTFDLYEYPAEKKAKLAAIEFKDYAITWWNQIRTEYHRVGHDHI-TWEDMK 239
Query: 2747 ALMRERFVPKHYYRELHYKLMTLKQGAKSVEEYRQELELYILRLNLEEDKDASMARFLSG 2568
MR RFVP +Y R+LH KL L QG + ED++++MARFL G
Sbjct: 240 REMRRRFVPAYYSRDLHLKLKRLVQG-------------------ITEDEESTMARFLVG 280
Query: 2567 LNREIANQ 2544
LN+ IA++
Sbjct: 281 LNKPIADK 288
>gb|ABA96965.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1202
Score = 345 bits (884), Expect(3) = 0.0
Identities = 157/227 (69%), Positives = 195/227 (85%)
Frame = -2
Query: 1252 LSPGKVLPNRPAYRSPPKETKELKRQVEDLISKGYVRESMSPCAVPVLLVPKKDGTWRMC 1073
L PG LPNR AYR+ P+ETKE++RQV+DL+ + YVR+S+SPC VPV+LVPKKDG+WRMC
Sbjct: 561 LIPGASLPNRAAYRTNPEETKEIQRQVQDLLDRWYVRQSLSPCVVPVILVPKKDGSWRMC 620
Query: 1072 IDCRAINNITIKYRHPIPRLDDLLDELHGSNLFSKIDLKSGYHQIRMREGDEWKTAFKTN 893
+D RAINNITI+YRHPIPR DD+LDEL GS +F+KIDL+SGYHQIRM+ GDEWKTAFKT
Sbjct: 621 VDYRAINNITIRYRHPIPRSDDMLDELCGSIIFTKIDLRSGYHQIRMKLGDEWKTAFKTK 680
Query: 892 FGLYEWMVMPFGLTNVPSTFMRLMNHVLRNFIGKFVVVYFDDILVYSKTYEMHVQHLREI 713
FGLYEW+VMPFGLTN PSTFMRLMN VLR FIG+FVVVYFDDIL+YSK+++ H+ HLR +
Sbjct: 681 FGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGRFVVVYFDDILIYSKSFDEHMDHLRAV 740
Query: 712 LNILRIEKLFANLDKCEFCLEKVTFLCYVVSSQGLQVDEGKVKQLRN 572
N L +LFANL+ C FC E+V+FL YVV+ QG++VDE K++ +++
Sbjct: 741 FNALHDARLFANLENCIFCTERVSFLGYVVTPQGIEVDESKIEAIKS 787
Score = 213 bits (541), Expect(3) = 0.0
Identities = 163/595 (27%), Positives = 244/595 (41%), Gaps = 30/595 (5%)
Frame = -1
Query: 2927 FLDWERQVENMFMLKICNKFLKARLVIAEFSGYALHWWERIVNQRVRSGRPPVDTWRELK 2748
+LDWE VE + + + + R +EF +A+ WW + ++ V TW ELK
Sbjct: 43 YLDWEMTVEQKYNAHLVPEQHRVRQASSEFKDFAIMWWAGLSDEGVLP-----TTWEELK 97
Query: 2747 ALMRERFVPKHYYRELHYKLMTLKQGAKSVEEYRQELELYILRLNLEEDKDASMARFLSG 2568
MR+RFVP Y+R+L KLM L+QG KSV++Y EL+ + R + E + ++ RF SG
Sbjct: 98 VAMRDRFVPPSYHRDLRKKLMRLEQGDKSVQDYYGELQKGVRRCGIVEGVEDAICRFYSG 157
Query: 2567 LNREIANQLELYPHTTYEDMCHLPNKIESQ---RKRSGMMRSS----------------- 2448
L EI N ++ + + E + R G ++S
Sbjct: 158 LREEIHNIVDCKEFNSVNQLFRFAMPAEKELQGRDHQGKSKASTYTPRTTPSAGLPKAVS 217
Query: 2447 FPNQRQVATTKPPTSNFK------PWPKKEEDPRGTFQPPTKPK--MDERGKIIYDSPKC 2292
F Q A +P S P P+ E +G+ Q P K + G+I +C
Sbjct: 218 FRASSQPAGKRPAASGASAAPKPFPPPRPAESGKGSTQVPAKSASYVASTGRI-----QC 272
Query: 2291 FKCNGVGHYASSCPTKRALIFREDLNGWIXXXXXXXXXXXXXXXXXXXXEHVDLNPLGSD 2112
+C G GH CP++RA + ED G+I D G D
Sbjct: 273 HRCQGFGHVQKDCPSQRAYVATED--GYITTSDMEEEEEEEEVEDE------DGEIFGRD 324
Query: 2111 E--DVLSLVTIRALSAQTFDDNMIEQRENIFYSKCKVEGRIANLIIDSGSCVNVASTYLV 1938
+ D +++ R LS Q F + R A +IID GSC N+
Sbjct: 325 DTTDYRTIIVQRVLSTQIF---------------FVINNRRARVIIDGGSCNNL------ 363
Query: 1937 EKLKLPTTKHDKPYKLYWLNDSGEIKVLRQVVVPIEMGAYKDEILCDVVPMQACHLLLGS 1758
WLNDSG KV + V +G+Y D + CDVVPMQAC LLLG
Sbjct: 364 -----------------WLNDSGRAKVTQVCRVSFSIGSYADSVDCDVVPMQACSLLLGR 406
Query: 1757 PWQFDRKSLHNGEKNTYSFVKDGRTFTMNPLTPQQVRNEQXXXXXXXXXXXXXXXXXXXX 1578
PW+ D + H+G N Y+FV +G+ T+ PLTP ++
Sbjct: 407 PWEHDNDATHHGRSNKYTFVHNGKKITLLPLTPAEI--------------VEADKERAAS 452
Query: 1577 XXXXXXXXXXXXXVMXXXXXXXXXXXXXXXEMKEKNCVFAKPSEAIEAIERKEVVLLLYY 1398
+ +K K V I I ++ L
Sbjct: 453 LKLDESENQQVAKSVFPPKKDKLSPSSKVEGIKLKGGVMIATKCEIAEISDDDMCYFLIC 512
Query: 1397 RESFT*SKEHSPSFSSEILQVIEDYKDIFPDEMLGGLPPISGIERQIDFVPGEGL 1233
+++ + + S + ++++Y+D+FP E+ GLPP+ GIE QID +PG L
Sbjct: 513 KQALVSLDDIASSMPPVVTNLLQEYEDVFPAEIPLGLPPMRGIEHQIDLIPGASL 567
Score = 169 bits (428), Expect(3) = 0.0
Identities = 81/127 (63%), Positives = 98/127 (77%)
Frame = -1
Query: 587 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 408
+AIK WP P+ +++RSF GL FYRRF+K+FS A+PL ++ KK F QEQ+F
Sbjct: 783 EAIKSWPVPQTITQLRSFLGLAGFYRRFVKDFSIFAAPLNELTKKGVVFHWGKTQEQSFD 842
Query: 407 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYFSEKLNGAAVRYSTY 228
L +KL APLL LPNF KTFE+ECDASG+GIGGVLMQDGKP+AYFSEKL+G + YSTY
Sbjct: 843 TLKDKLTHAPLLQLPNFGKTFELECDASGVGIGGVLMQDGKPVAYFSEKLHGPVLNYSTY 902
Query: 227 DKELYAL 207
DKELYAL
Sbjct: 903 DKELYAL 909
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 362 bits (930), Expect(3) = 0.0
Identities = 167/224 (74%), Positives = 199/224 (88%)
Frame = -2
Query: 1246 PGKVLPNRPAYRSPPKETKELKRQVEDLISKGYVRESMSPCAVPVLLVPKKDGTWRMCID 1067
PG LPNRPAYR+ P ETKEL++QV +L+ +G++RESMSPCAVPVLLVPKKDG+WRMC+D
Sbjct: 906 PGASLPNRPAYRTNPVETKELEKQVTELMERGHIRESMSPCAVPVLLVPKKDGSWRMCVD 965
Query: 1066 CRAINNITIKYRHPIPRLDDLLDELHGSNLFSKIDLKSGYHQIRMREGDEWKTAFKTNFG 887
CRAINNIT+KYRHPIPRLDD+LDELHGS++FSK+DLKSGYHQIRM+EGDEWKTAFKT G
Sbjct: 966 CRAINNITVKYRHPIPRLDDMLDELHGSSIFSKVDLKSGYHQIRMKEGDEWKTAFKTIQG 1025
Query: 886 LYEWMVMPFGLTNVPSTFMRLMNHVLRNFIGKFVVVYFDDILVYSKTYEMHVQHLREILN 707
LYEW+VMPFGLTN PSTFMRLMNHVLR FIG+FV+VYFDDILVYSK+ E HV+HL+ +L
Sbjct: 1026 LYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGRFVIVYFDDILVYSKSLEEHVEHLKMVLE 1085
Query: 706 ILRIEKLFANLDKCEFCLEKVTFLCYVVSSQGLQVDEGKVKQLR 575
+LR EKL+ANL KC F + + FL +VVS+ G++VDE KVK +R
Sbjct: 1086 VLRKEKLYANLKKCTFGTDNLVFLGFVVSTDGVKVDEEKVKAIR 1129
Score = 304 bits (778), Expect(3) = 0.0
Identities = 143/195 (73%), Positives = 166/195 (85%)
Frame = -1
Query: 587 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 408
+AI+EWP+P++ EVRSFHGL FYRRF+K+FSTLA+PLT+VIKK GFK E QE AF+
Sbjct: 1126 KAIREWPSPKSVGEVRSFHGLAGFYRRFVKDFSTLAAPLTEVIKKNVGFKWEQAQEDAFQ 1185
Query: 407 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYFSEKLNGAAVRYSTY 228
L EKL AP+LSLP+F KTFE+ECDASG+GIG VLMQD KP+AYFSEKL GA + Y TY
Sbjct: 1186 ALKEKLTHAPVLSLPDFLKTFEIECDASGVGIGVVLMQDKKPIAYFSEKLGGATLNYPTY 1245
Query: 227 DKELYALIRTLKHWQHYLWPKEFVVHNDHEALKFLKGQHKLNKRHARWMKFIETFPYAIH 48
DKELYAL+R L+ QHYLWPKEFV+H DHE+LK LKGQ KLNKRHARW++FIETFPY I
Sbjct: 1246 DKELYALVRALQTGQHYLWPKEFVIHTDHESLKHLKGQQKLNKRHARWVEFIETFPYVIK 1305
Query: 47 YKKGKENVVADALSR 3
YKKGK+NVVADALSR
Sbjct: 1306 YKKGKDNVVADALSR 1320
Score = 55.5 bits (132), Expect(3) = 0.0
Identities = 27/60 (45%), Positives = 37/60 (61%)
Frame = -1
Query: 1412 LLLYYRESFT*SKEHSPSFSSEILQVIEDYKDIFPDEMLGGLPPISGIERQIDFVPGEGL 1233
LL ++E+ + S+I +++DY D+FP+E GLPPI GIE QIDFVPG L
Sbjct: 851 LLFVFKETLMSLTNPEQAIPSKIKFLLQDYTDVFPEENPVGLPPIRGIEHQIDFVPGASL 910
Score = 255 bits (651), Expect(2) = 7e-65
Identities = 155/396 (39%), Positives = 221/396 (55%), Gaps = 16/396 (4%)
Frame = -1
Query: 2927 FLDWERQVENMFMLKICNKFLKARLVIAEFSGYALHWWERIVNQRVRSGRPPVDTWRELK 2748
+L+WE+++E +F + + K ++ EF YAL WW+++V R R+G P+++W ++K
Sbjct: 453 YLEWEKKIELVFNCQQYTEESKVKVAPTEFQNYALSWWDQLVTTRRRAGDYPIESWTQMK 512
Query: 2747 ALMRERFVPKHYYRELHYKLMTLKQGAKSVEEYRQELELYILRLNLEEDKDASMARFLSG 2568
+MR+RFVP HYYRELH +L L QG KSVEEY +E+E +LR +++ED +A M+RF+ G
Sbjct: 513 TIMRKRFVPSHYYRELHNRLRNLVQGNKSVEEYYKEMETLMLRADIQEDNEAIMSRFMGG 572
Query: 2567 LNREIANQLELYPHTTYEDMCHLPNKIESQRKRSGMMRSSFPNQRQVATTKPPTSNFKPW 2388
LNR+I ++LE+ + E++ H E Q KR RSS KP + KP
Sbjct: 573 LNRDIIDRLEVQHYVELEELLHKAIMFEKQLKR----RSS----------KPSFGSGKPS 618
Query: 2387 PKKEEDP--RGTFQPPTKPKMDE-----RGKIIYDSP---KCFKCNGVGHYASSCPTKRA 2238
K+E + ++P KPK+++ +GK + K FKC G GHYAS C KR
Sbjct: 619 YHKDERSGFQKDYKPFIKPKVEDQDQKGKGKAVMTRTRDIKGFKCQGHGHYASECSNKRI 678
Query: 2237 LIFREDLNGWIXXXXXXXXXXXXXXXXXXXXEHVDLNPLGSDEDVLS------LVTIRAL 2076
+I ++ G I L S ED + LVT++AL
Sbjct: 679 MIIKD--TGEIESEDE------------------QLEESSSTEDYEAPSKGELLVTMKAL 718
Query: 2075 SAQTFDDNMIEQRENIFYSKCKVEGRIANLIIDSGSCVNVASTYLVEKLKLPTTKHDKPY 1896
S D EQREN+F+S C V ++ +LIID GSC NVAS +VEKL L KH +PY
Sbjct: 719 SVIAKTDEQ-EQRENLFHSSCMVNDKVCSLIIDGGSCTNVASETMVEKLGLKVMKHPRPY 777
Query: 1895 KLYWLNDSGEIKVLRQVVVPIEMGAYKDEILCDVVP 1788
KL WLN+ GE+ V RQV VP+ +G K IL + P
Sbjct: 778 KLQWLNEDGEMSVDRQVKVPLSIG--KKTILVPMTP 811
Score = 22.7 bits (47), Expect(2) = 7e-65
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -3
Query: 2970 MKWKLPSFKGEND 2932
+K ++PSFKG ND
Sbjct: 437 LKIRIPSFKGTND 449
>emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group]
Length = 2388
Score = 284 bits (726), Expect(3) = 0.0
Identities = 128/195 (65%), Positives = 163/195 (83%)
Frame = -1
Query: 587 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 408
+AI+ WPTP+ S+VRSF GL FYRRF+++FST+A+PL + KK F T QE AF
Sbjct: 770 EAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFH 829
Query: 407 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYFSEKLNGAAVRYSTY 228
+L +KL APLL LP+F KTFE+ECDASGIG+GGVL+Q+GKP+AYFSEKL+G + YSTY
Sbjct: 830 MLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGLVLNYSTY 889
Query: 227 DKELYALIRTLKHWQHYLWPKEFVVHNDHEALKFLKGQHKLNKRHARWMKFIETFPYAIH 48
DKELYAL+RTL+ WQHYLWPKEFV+H+DHE+LK ++ Q KLN+RHA+W++FIE+FPY I
Sbjct: 890 DKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIK 949
Query: 47 YKKGKENVVADALSR 3
+KKGKEN++ADALSR
Sbjct: 950 HKKGKENIIADALSR 964
Score = 275 bits (702), Expect(3) = 0.0
Identities = 136/227 (59%), Positives = 164/227 (72%)
Frame = -2
Query: 1252 LSPGKVLPNRPAYRSPPKETKELKRQVEDLISKGYVRESMSPCAVPVLLVPKKDGTWRMC 1073
L PG LPNR YR+ P+ETKE++RQV +L+ KG
Sbjct: 578 LIPGASLPNRAPYRTNPEETKEIQRQVHELLDKG-------------------------- 611
Query: 1072 IDCRAINNITIKYRHPIPRLDDLLDELHGSNLFSKIDLKSGYHQIRMREGDEWKTAFKTN 893
AINNITI+YRHPIPRLDD+LDEL GS +FSK DL+SGYHQIRM+ GDEWKTAFKT
Sbjct: 612 ----AINNITIRYRHPIPRLDDMLDELSGSIVFSKADLRSGYHQIRMKLGDEWKTAFKTK 667
Query: 892 FGLYEWMVMPFGLTNVPSTFMRLMNHVLRNFIGKFVVVYFDDILVYSKTYEMHVQHLREI 713
FGLYEW+VMPFGLTN PSTFMRLMN VLR FIGKFVVVYFDDIL+YSK+ H HLR +
Sbjct: 668 FGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAV 727
Query: 712 LNILRIEKLFANLDKCEFCLEKVTFLCYVVSSQGLQVDEGKVKQLRN 572
N LR +LF NL+KC FC ++V+FL YVV+ QG++VD+ KV+ +++
Sbjct: 728 FNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQS 774
Score = 152 bits (383), Expect(3) = 0.0
Identities = 95/289 (32%), Positives = 131/289 (45%)
Frame = -1
Query: 2099 SLVTIRALSAQTFDDNMIEQRENIFYSKCKVEGRIANLIIDSGSCVNVASTYLVEKLKLP 1920
SL+ R LSAQ + QR +F +KC V+ R +IID GSC N+AS+ +VEKL L
Sbjct: 348 SLIVQRVLSAQ-MEKAEQNQRHTLFQTKCVVKERCCRMIIDGGSCNNLASSEMVEKLALS 406
Query: 1919 TTKHDKPYKLYWLNDSGEIKVLRQVVVPIEMGAYKDEILCDVVPMQACHLLLGSPWQFDR 1740
T H PY + WLN+SG+ KV + V + +G Y D + CDVVPMQ C++LLG PWQFDR
Sbjct: 407 TKPHPHPYYIQWLNNSGKAKVTKLVHINFAIGNYHDVVECDVVPMQVCNILLGRPWQFDR 466
Query: 1739 KSLHNGEKNTYSFVKDGRTFTMNPLTPQQVRNEQXXXXXXXXXXXXXXXXXXXXXXXXXX 1560
S+H+G N YSF+ + ++P++P+ + +
Sbjct: 467 DSMHHGRSNQYSFLYHDKKIVLHPMSPEDILRDDVAKAAKSKCE---------------- 510
Query: 1559 XXXXXXXVMXXXXXXXXXXXXXXXEMKEKNCVFAKPSEAIEAIERKEVVLLLYYRESFT* 1380
+K K C+ A S+ E I V L Y + F
Sbjct: 511 ---------SDKKAQSDGKKPETINLKPK-CLLATKSDINELIASPSVAYALEYSDVF-- 558
Query: 1379 SKEHSPSFSSEILQVIEDYKDIFPDEMLGGLPPISGIERQIDFVPGEGL 1233
P E+ GLPP+ GIE QID +PG L
Sbjct: 559 -----------------------PKEVPPGLPPVRGIEHQIDLIPGASL 584
Score = 179 bits (455), Expect = 6e-42
Identities = 90/194 (46%), Positives = 126/194 (64%)
Frame = -1
Query: 584 AIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFKL 405
A+ +W P+ +++RSF GL +YRRFI+NFS +A P+T ++KK E F + E+AF+
Sbjct: 1702 AVTDWKQPKTVTQIRSFLGLAGYYRRFIENFSKIARPMTQLLKKEEKFVWSPQCEKAFQT 1761
Query: 404 LNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYFSEKLNGAAVRYSTYD 225
L EKL S+P+L LP+ K F V CDAS G+G VLMQDG +AY S +L Y T+D
Sbjct: 1762 LKEKLVSSPVLILPDTRKDFMVYCDASRQGLGCVLMQDGHVVAYASRQLWPHEGNYPTHD 1821
Query: 224 KELYALIRTLKHWQHYLWPKEFVVHNDHEALKFLKGQHKLNKRHARWMKFIETFPYAIHY 45
EL A++ LK W+HYL ++ DH++LK++ Q LN R RW++ I+ + IHY
Sbjct: 1822 LELAAVVHALKIWRHYLIGNRCEIYTDHKSLKYIFTQSDLNLRQRRWLELIKDYDVGIHY 1881
Query: 44 KKGKENVVADALSR 3
GK NVVADALS+
Sbjct: 1882 HPGKANVVADALSQ 1895
Score = 139 bits (350), Expect = 9e-30
Identities = 66/130 (50%), Positives = 91/130 (70%)
Frame = -2
Query: 1273 ELNAKLILSPGKVLPNRPAYRSPPKETKELKRQVEDLISKGYVRESMSPCAVPVLLVPKK 1094
E+ ++ L+PG + Y E E+K+Q+E+L KGY+R S SP PV+ V KK
Sbjct: 1543 EIEFRIDLAPGTTPLYKRPYHMAANELAEVKKQLEELKEKGYIRPSTSPWGAPVIFVEKK 1602
Query: 1093 DGTWRMCIDCRAINNITIKYRHPIPRLDDLLDELHGSNLFSKIDLKSGYHQIRMREGDEW 914
D T RMC+D RA+N +TIK ++P+PR+DDL D+L G+ +FSKIDL+SGYHQ+R+RE D
Sbjct: 1603 DKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREKDIP 1662
Query: 913 KTAFKTNFGL 884
KTAF T +GL
Sbjct: 1663 KTAFTTRYGL 1672
Score = 112 bits (281), Expect = 9e-22
Identities = 66/179 (36%), Positives = 99/179 (55%), Gaps = 1/179 (0%)
Frame = -1
Query: 2927 FLDWERQVENMFMLKICNKFLKARLVIAEFSGYALHWWERIVNQRVRSGRPPVDTWRELK 2748
+L WE V+ F + + R +EF+ +A WW + ++ TW LK
Sbjct: 169 YLSWEIAVDQKFACHEFPENTRVRAATSEFTDFASVWW---IEHGKKNPNNMPQTWDALK 225
Query: 2747 ALMRERFVPKHYYRELHYKLMTLKQGAKSVEEYRQELELYILRLNLEEDKDASMARFLSG 2568
+MR RFVP +Y R+L +L L+QGAKSVEEY QEL++ +LR LEE +DA+MARFL G
Sbjct: 226 RVMRARFVPSYYARDLLNRLQQLRQGAKSVEEYYQELQICLLRCKLEETEDAAMARFLGG 285
Query: 2567 LNREIANQLELYPHTTYEDMCHLPNKIESQ-RKRSGMMRSSFPNQRQVATTKPPTSNFK 2394
LNREI + ++ +T + HL K E + + R +++F A +PP + +
Sbjct: 286 LNREIYDIVDYKDYTNMTRLFHLACKAEREVQGRRASAKANFS-----ADNEPPEEHIR 339
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 356 bits (914), Expect(3) = 0.0
Identities = 162/225 (72%), Positives = 196/225 (87%)
Frame = -2
Query: 1252 LSPGKVLPNRPAYRSPPKETKELKRQVEDLISKGYVRESMSPCAVPVLLVPKKDGTWRMC 1073
L PG LPNR YR+ P+ETKE++RQV++L+ KGYVRES+SPCAVPV+LVPKKDGTWRMC
Sbjct: 715 LIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCAVPVILVPKKDGTWRMC 774
Query: 1072 IDCRAINNITIKYRHPIPRLDDLLDELHGSNLFSKIDLKSGYHQIRMREGDEWKTAFKTN 893
+DCRAINNITI+YRHPIPRLDD+LDEL G+ +FSK+DL+SGYHQIRM+ GDEWKTAFKT
Sbjct: 775 VDCRAINNITIRYRHPIPRLDDMLDELSGAIVFSKVDLRSGYHQIRMKLGDEWKTAFKTK 834
Query: 892 FGLYEWMVMPFGLTNVPSTFMRLMNHVLRNFIGKFVVVYFDDILVYSKTYEMHVQHLREI 713
FGLYEW+VMPFGLTN PSTFMRLMN VLR FIGKFVVVYFDDIL+YSK+ + HV H+R +
Sbjct: 835 FGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGKFVVVYFDDILIYSKSMDEHVDHMRAV 894
Query: 712 LNILRIEKLFANLDKCEFCLEKVTFLCYVVSSQGLQVDEGKVKQL 578
N LR +LF NL+KC FC ++V+FL YVV+ QG++VD+ KV+ +
Sbjct: 895 FNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAI 939
Score = 280 bits (715), Expect(3) = 0.0
Identities = 126/195 (64%), Positives = 162/195 (83%)
Frame = -1
Query: 587 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 408
+AI WP P+ ++VRSF GL FYRRF+K+FST+A+PL ++ KK F QE AF
Sbjct: 937 EAIHGWPMPKTITQVRSFLGLAGFYRRFVKDFSTIAAPLNELTKKGVHFSWGKVQEHAFN 996
Query: 407 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYFSEKLNGAAVRYSTY 228
+L +KL APLL LP+F KTFE+ECDASGIG+GGVL+Q+GKP+AYFSEKL+G+ + YSTY
Sbjct: 997 VLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGSVLNYSTY 1056
Query: 227 DKELYALIRTLKHWQHYLWPKEFVVHNDHEALKFLKGQHKLNKRHARWMKFIETFPYAIH 48
DKELYAL+RTL+ WQHYLWPKEFV+H+DHE+LK ++ Q KLN+RHA+W++FIE+FPY I
Sbjct: 1057 DKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIK 1116
Query: 47 YKKGKENVVADALSR 3
+KKGKEN++ADALSR
Sbjct: 1117 HKKGKENIIADALSR 1131
Score = 55.1 bits (131), Expect(3) = 0.0
Identities = 26/80 (32%), Positives = 42/80 (52%)
Frame = -1
Query: 1472 NCVFAKPSEAIEAIERKEVVLLLYYRESFT*SKEHSPSFSSEILQVIEDYKDIFPDEMLG 1293
+C+ A ++ E V L +++ ++ S I ++++Y D+FP E+
Sbjct: 642 HCLLATKTDVNELFASTTVAYALVCKDALISIQDMQHSLPPVITNILQEYSDVFPSEIPE 701
Query: 1292 GLPPISGIERQIDFVPGEGL 1233
GLPPI GIE QID +PG L
Sbjct: 702 GLPPIRGIEHQIDLIPGASL 721
Score = 250 bits (638), Expect = 3e-63
Identities = 151/451 (33%), Positives = 226/451 (50%), Gaps = 25/451 (5%)
Frame = -1
Query: 2927 FLDWERQVENMFMLKICNKFLKARLVIAEFSGYALHWWERIVNQRVRSGRPPVDTWRELK 2748
++ WE V+ F + + R +EF+ +A WW + ++ TW LK
Sbjct: 163 YITWEIAVDQKFACHEFPENARVRAATSEFTEFASVWW---IEHGKKNPNNMPQTWDALK 219
Query: 2747 ALMRERFVPKHYYRELHYKLMTLKQGAKSVEEYRQELELYILRLNLEEDKDASMARFLSG 2568
+MR RFVP +Y R++ KL L+QG KSVEEY QEL++ +LR N+EE ++++MARFL G
Sbjct: 220 RVMRARFVPSYYARDMLNKLQQLRQGTKSVEEYYQELQMGMLRCNIEEGEESAMARFLGG 279
Query: 2567 LNREIANQLELYPHTTYEDMCHLPNKIESQ-RKRSGMMRS------SFPNQRQVATTK-- 2415
LNREI + L + + HL K E + + R RS S P Q++ T+
Sbjct: 280 LNREIQDILAYKDYANVTRLFHLACKAEREVQGRRASARSNVSAGKSTPWQQRTTTSMTG 339
Query: 2414 --------------PPTSNFKPWPKKEEDPRGTFQPPTKPKMDERGKIIYDSPKCFKCNG 2277
PP+S+ KP + Q P C++C G
Sbjct: 340 RTLAPTPSPSRPAPPPSSSDKPRASSTNSATKSAQKPAGSASSVASTGRTRDVLCYRCKG 399
Query: 2276 VGHYASSCPTKRALIFREDLNGWIXXXXXXXXXXXXXXXXXXXXEHVDLNPLGSD--EDV 2103
GH CP +R L+ ++D G+ + +G+D E
Sbjct: 400 YGHVQRDCPNQRVLVVKDD-GGYSSASDLDEATLALLAADDAGTKEPPEEQIGADDAEHY 458
Query: 2102 LSLVTIRALSAQTFDDNMIEQRENIFYSKCKVEGRIANLIIDSGSCVNVASTYLVEKLKL 1923
SL+ R LSAQ + QR +F +KC ++ R LIID GSC N+AS+ +VEKL L
Sbjct: 459 ESLIVQRVLSAQ-MEKAEQNQRHTLFQTKCVIKERSCRLIIDGGSCNNLASSDMVEKLAL 517
Query: 1922 PTTKHDKPYKLYWLNDSGEIKVLRQVVVPIEMGAYKDEILCDVVPMQACHLLLGSPWQFD 1743
T H PY + WLN+SG++KV + V + +G+Y+D + CDVVPM AC++LLG PWQFD
Sbjct: 518 TTKPHPHPYHIQWLNNSGKVKVTKLVRINFAIGSYRDVVDCDVVPMDACNILLGRPWQFD 577
Query: 1742 RKSLHNGEKNTYSFVKDGRTFTMNPLTPQQV 1650
+H+G N YS + + + P++P+ +
Sbjct: 578 SDCMHHGRSNQYSLIHHDKKIILLPMSPEAI 608
>emb|CAD39981.1| OSJNBa0032B23.3 [Oryza sativa Japonica Group]
Length = 1170
Score = 347 bits (889), Expect(3) = e-176
Identities = 159/227 (70%), Positives = 195/227 (85%)
Frame = -2
Query: 1252 LSPGKVLPNRPAYRSPPKETKELKRQVEDLISKGYVRESMSPCAVPVLLVPKKDGTWRMC 1073
L PG LPNR YR+ P+ETKE++RQ+++L+ KGYVRES+SPC+VPVLLVPKKDG+WRMC
Sbjct: 373 LIPGASLPNRAPYRTNPEETKEIQRQMQELLDKGYVRESLSPCSVPVLLVPKKDGSWRMC 432
Query: 1072 IDCRAINNITIKYRHPIPRLDDLLDELHGSNLFSKIDLKSGYHQIRMREGDEWKTAFKTN 893
+DCRAINNITI+YRHPIPRLDD+LDEL GS +F KIDL+SGYHQIRM+ GDEWKTAFKT
Sbjct: 433 VDCRAINNITIRYRHPIPRLDDMLDELSGSLVFYKIDLRSGYHQIRMKLGDEWKTAFKTK 492
Query: 892 FGLYEWMVMPFGLTNVPSTFMRLMNHVLRNFIGKFVVVYFDDILVYSKTYEMHVQHLREI 713
FGLYEW+VMPFGLTN PSTFMRLMN VLR FIG+FVVVYFDDIL+YS++ E H HLR +
Sbjct: 493 FGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGRFVVVYFDDILIYSRSIEDHHGHLRAV 552
Query: 712 LNILRIEKLFANLDKCEFCLEKVTFLCYVVSSQGLQVDEGKVKQLRN 572
+ LR +LF NL+KC FC ++V+FL YVV+ QG++VD+ KV+ + +
Sbjct: 553 FDALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIHS 599
Score = 272 bits (696), Expect(3) = e-176
Identities = 123/195 (63%), Positives = 158/195 (81%)
Frame = -1
Query: 587 QAIKEWPTPRNASEVRSFHGLTSFYRRFIKNFSTLASPLTDVIKKTEGFK*ETKQEQAFK 408
+AI WP P ++VRSF GL FYRRF+K+FST+A+PL ++ K+ F Q AF
Sbjct: 595 EAIHSWPVPTTITQVRSFLGLAGFYRRFVKDFSTIAAPLHELTKRNVTFTWAAAQRNAFD 654
Query: 407 LLNEKLCSAPLLSLPNFEKTFEVECDASGIGIGGVLMQDGKPLAYFSEKLNGAAVRYSTY 228
L +KL APLL LP+F KT E+ECDASGIG+GGVL+Q+GKP+AYFSEKL+G ++ YSTY
Sbjct: 655 TLKDKLTHAPLLQLPDFNKTLELECDASGIGLGGVLLQEGKPVAYFSEKLSGPSLNYSTY 714
Query: 227 DKELYALIRTLKHWQHYLWPKEFVVHNDHEALKFLKGQHKLNKRHARWMKFIETFPYAIH 48
DKEL+AL+RTL+ WQHYLWPKEFV+H+DHE+LK ++ Q KLN+RHA+W++FIE+FPY I
Sbjct: 715 DKELFALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQAKLNRRHAKWVEFIESFPYVIK 774
Query: 47 YKKGKENVVADALSR 3
+KKGKENV+ADALSR
Sbjct: 775 HKKGKENVIADALSR 789
Score = 52.0 bits (123), Expect(3) = e-176
Identities = 28/80 (35%), Positives = 41/80 (51%)
Frame = -1
Query: 1472 NCVFAKPSEAIEAIERKEVVLLLYYRESFT*SKEHSPSFSSEILQVIEDYKDIFPDEMLG 1293
+C A S+ E V L +E+ ++ S + ++++Y DIFP E+
Sbjct: 300 SCFIATKSDLDEVDTDTVVCYALVCKETLFPIEDTPISLPPPVTNLLQEYADIFPKEVPP 359
Query: 1292 GLPPISGIERQIDFVPGEGL 1233
GLPPI GIE QID +PG L
Sbjct: 360 GLPPIRGIEHQIDLIPGASL 379
Score = 89.0 bits (219), Expect = 1e-14
Identities = 61/188 (32%), Positives = 83/188 (44%), Gaps = 4/188 (2%)
Frame = -1
Query: 2417 KPPTSNFKPWPKKEEDPRGTFQPPTKPKMDERGKIIYDSPKCFKCNGVGHYASSCPTKRA 2238
+P T+N P P E RG P+K +C +C G GH CP+ R
Sbjct: 79 RPSTTNSTPRPS--EPTRGVAATPSKSSSSVASSGRTRDIQCLRCKGYGHVRKDCPSTRV 136
Query: 2237 LIFRED--LNGWIXXXXXXXXXXXXXXXXXXXXEHVDLNPLGSD--EDVLSLVTIRALSA 2070
+I R D + H D + ++ E SLV R LSA
Sbjct: 137 MIVRADGGYSSASDLDEETYALLATNNAGEGDAPHQDEEHIRAEAAEHYESLVVQRVLSA 196
Query: 2069 QTFDDNMIEQRENIFYSKCKVEGRIANLIIDSGSCVNVASTYLVEKLKLPTTKHDKPYKL 1890
Q + QR +F +KC ++ R +IID GSC N+AS +VEKL L T H +PY +
Sbjct: 197 Q-MERAEQNQRHTLFQTKCVIKERSCRVIIDRGSCNNLASAKMVEKLALSTQPHPQPYYI 255
Query: 1889 YWLNDSGE 1866
WLN SG+
Sbjct: 256 QWLNSSGK 263