BLASTX nr result
ID: Catharanthus22_contig00009683
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00009683
(709 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ06841.1| hypothetical protein PRUPE_ppa009294mg [Prunus pe... 74 6e-11
gb|EMS67637.1| Neurofilament heavy polypeptide [Triticum urartu] 67 4e-09
ref|NP_001168362.1| hypothetical protein [Zea mays] gi|223945609... 64 5e-08
gb|EOY07655.1| RNA-binding family protein with retrovirus zinc f... 63 8e-08
ref|XP_004143594.1| PREDICTED: serine/arginine-rich splicing fac... 62 2e-07
gb|EXB88502.1| Serine/arginine-rich splicing factor 4 [Morus not... 61 4e-07
gb|EPS69715.1| hypothetical protein M569_05051 [Genlisea aurea] 61 4e-07
gb|AFK35693.1| unknown [Lotus japonicus] 61 4e-07
gb|EXB23437.1| Serine/arginine-rich splicing factor 7 [Morus not... 60 5e-07
ref|XP_006345907.1| PREDICTED: serine/arginine-rich splicing fac... 60 5e-07
gb|EOY18433.1| RNA-binding family protein with retrovirus zinc f... 60 5e-07
gb|EOY18432.1| RNA-binding family protein with retrovirus zinc f... 60 5e-07
gb|EOY18430.1| RNA-binding family protein with retrovirus zinc f... 60 5e-07
gb|EMJ19928.1| hypothetical protein PRUPE_ppa009074mg [Prunus pe... 60 5e-07
ref|XP_004239756.1| PREDICTED: serine/arginine-rich splicing fac... 60 5e-07
ref|XP_006485979.1| PREDICTED: serine/arginine-rich splicing fac... 60 7e-07
ref|XP_006436157.1| hypothetical protein CICLE_v10032170mg [Citr... 60 7e-07
ref|XP_006436154.1| hypothetical protein CICLE_v10032170mg [Citr... 60 7e-07
ref|XP_002525221.1| arginine/serine-rich splicing factor, putati... 60 7e-07
ref|NP_190918.3| serine/arginine-rich splicing factor RS2Z32 [Ar... 60 9e-07
>gb|EMJ06841.1| hypothetical protein PRUPE_ppa009294mg [Prunus persica]
Length = 282
Score = 73.6 bits (179), Expect = 6e-11
Identities = 34/40 (85%), Positives = 37/40 (92%)
Frame = +3
Query: 588 DGLTVSGTHLRRVRDVDMKRDYAFVEFSDPRDADDARYSM 707
D LTVSG LRRVRDVDMKR++AFVEFSDPRDADDARYS+
Sbjct: 9 DSLTVSGNRLRRVRDVDMKREFAFVEFSDPRDADDARYSL 48
>gb|EMS67637.1| Neurofilament heavy polypeptide [Triticum urartu]
Length = 431
Score = 67.4 bits (163), Expect = 4e-09
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = +3
Query: 585 VDGLTVSGTHLRRVRDVDMKRDYAFVEFSDPRDADDARYSM 707
+DG+TVSG H RVR VDMK ++AFVEFSDPRDAD+ARY++
Sbjct: 125 LDGVTVSGNHFHRVRHVDMKHEFAFVEFSDPRDADEARYNL 165
>ref|NP_001168362.1| hypothetical protein [Zea mays] gi|223945609|gb|ACN26888.1| unknown
[Zea mays] gi|223947765|gb|ACN27966.1| unknown [Zea
mays] gi|413950152|gb|AFW82801.1| hypothetical protein
ZEAMMB73_678679 [Zea mays]
Length = 315
Score = 63.9 bits (154), Expect = 5e-08
Identities = 26/38 (68%), Positives = 34/38 (89%)
Frame = +3
Query: 594 LTVSGTHLRRVRDVDMKRDYAFVEFSDPRDADDARYSM 707
L V G H RR+R+V++KRDYAF+EFSDPRDADDA+Y++
Sbjct: 17 LIVCGNHFRRIREVELKRDYAFIEFSDPRDADDAQYNL 54
>gb|EOY07655.1| RNA-binding family protein with retrovirus zinc finger-like domain,
putative [Theobroma cacao]
Length = 312
Score = 63.2 bits (152), Expect = 8e-08
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = +3
Query: 588 DGLTVSGTHLRRVRDVDMKRDYAFVEFSDPRDADDARYSM 707
DGLTVS + RR+RDVDMK D+AFVE S PRDAD ARYS+
Sbjct: 68 DGLTVSSNNFRRIRDVDMKHDFAFVELSYPRDADGARYSL 107
>ref|XP_004143594.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
1 [Cucumis sativus] gi|449451691|ref|XP_004143595.1|
PREDICTED: serine/arginine-rich splicing factor
RS2Z32-like isoform 2 [Cucumis sativus]
gi|449507559|ref|XP_004163066.1| PREDICTED:
serine/arginine-rich splicing factor RS2Z32-like isoform
1 [Cucumis sativus] gi|449507562|ref|XP_004163067.1|
PREDICTED: serine/arginine-rich splicing factor
RS2Z32-like isoform 2 [Cucumis sativus]
Length = 309
Score = 62.0 bits (149), Expect = 2e-07
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = +3
Query: 621 RVRDVDMKRDYAFVEFSDPRDADDARYSM 707
RVRDVDMKRDYAFVEFSDPRDADDARYS+
Sbjct: 36 RVRDVDMKRDYAFVEFSDPRDADDARYSL 64
>gb|EXB88502.1| Serine/arginine-rich splicing factor 4 [Morus notabilis]
Length = 313
Score = 60.8 bits (146), Expect = 4e-07
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = +3
Query: 621 RVRDVDMKRDYAFVEFSDPRDADDARYSM 707
RVRDVDMKRDYAFVEFSDPRDADDARY++
Sbjct: 36 RVRDVDMKRDYAFVEFSDPRDADDARYAL 64
>gb|EPS69715.1| hypothetical protein M569_05051 [Genlisea aurea]
Length = 318
Score = 60.8 bits (146), Expect = 4e-07
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = +3
Query: 621 RVRDVDMKRDYAFVEFSDPRDADDARYSM 707
RVRDVDMKRDYAFVEFSDPRDADDARY++
Sbjct: 37 RVRDVDMKRDYAFVEFSDPRDADDARYNL 65
>gb|AFK35693.1| unknown [Lotus japonicus]
Length = 300
Score = 60.8 bits (146), Expect = 4e-07
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = +3
Query: 621 RVRDVDMKRDYAFVEFSDPRDADDARYSM 707
RVRDVDMKRDYAFVEFSDPRDADDARY++
Sbjct: 36 RVRDVDMKRDYAFVEFSDPRDADDARYNL 64
>gb|EXB23437.1| Serine/arginine-rich splicing factor 7 [Morus notabilis]
Length = 301
Score = 60.5 bits (145), Expect = 5e-07
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = +3
Query: 621 RVRDVDMKRDYAFVEFSDPRDADDARYSM 707
RVRDVDMKRD+AFVEFSDPRDADDARYS+
Sbjct: 36 RVRDVDMKRDFAFVEFSDPRDADDARYSL 64
>ref|XP_006345907.1| PREDICTED: serine/arginine-rich splicing factor RS2Z33-like isoform
X1 [Solanum tuberosum] gi|565358185|ref|XP_006345908.1|
PREDICTED: serine/arginine-rich splicing factor
RS2Z33-like isoform X2 [Solanum tuberosum]
Length = 300
Score = 60.5 bits (145), Expect = 5e-07
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +3
Query: 621 RVRDVDMKRDYAFVEFSDPRDADDARYSM 707
RVRDVDMKRDYAFVEFSDPRDADDARY +
Sbjct: 36 RVRDVDMKRDYAFVEFSDPRDADDARYGL 64
>gb|EOY18433.1| RNA-binding family protein with retrovirus zinc finger-like domain
isoform 4 [Theobroma cacao]
Length = 299
Score = 60.5 bits (145), Expect = 5e-07
Identities = 26/29 (89%), Positives = 29/29 (100%)
Frame = +3
Query: 621 RVRDVDMKRDYAFVEFSDPRDADDARYSM 707
R+RDVDMKRDYAFVEFSDPRDADDARY++
Sbjct: 36 RIRDVDMKRDYAFVEFSDPRDADDARYAL 64
>gb|EOY18432.1| RNA-binding family protein with retrovirus zinc finger-like domain
isoform 3 [Theobroma cacao]
Length = 302
Score = 60.5 bits (145), Expect = 5e-07
Identities = 26/29 (89%), Positives = 29/29 (100%)
Frame = +3
Query: 621 RVRDVDMKRDYAFVEFSDPRDADDARYSM 707
R+RDVDMKRDYAFVEFSDPRDADDARY++
Sbjct: 36 RIRDVDMKRDYAFVEFSDPRDADDARYAL 64
>gb|EOY18430.1| RNA-binding family protein with retrovirus zinc finger-like domain
isoform 1 [Theobroma cacao]
Length = 304
Score = 60.5 bits (145), Expect = 5e-07
Identities = 26/29 (89%), Positives = 29/29 (100%)
Frame = +3
Query: 621 RVRDVDMKRDYAFVEFSDPRDADDARYSM 707
R+RDVDMKRDYAFVEFSDPRDADDARY++
Sbjct: 36 RIRDVDMKRDYAFVEFSDPRDADDARYAL 64
>gb|EMJ19928.1| hypothetical protein PRUPE_ppa009074mg [Prunus persica]
Length = 307
Score = 60.5 bits (145), Expect = 5e-07
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = +3
Query: 621 RVRDVDMKRDYAFVEFSDPRDADDARYSM 707
RVRDVDMKRD+AFVEFSDPRDADDARYS+
Sbjct: 36 RVRDVDMKRDFAFVEFSDPRDADDARYSL 64
>ref|XP_004239756.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
1 [Solanum lycopersicum]
Length = 306
Score = 60.5 bits (145), Expect = 5e-07
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +3
Query: 621 RVRDVDMKRDYAFVEFSDPRDADDARYSM 707
RVRDVDMKRDYAFVEFSDPRDADDARY +
Sbjct: 36 RVRDVDMKRDYAFVEFSDPRDADDARYGL 64
>ref|XP_006485979.1| PREDICTED: serine/arginine-rich splicing factor RS2Z33-like isoform
X1 [Citrus sinensis]
Length = 340
Score = 60.1 bits (144), Expect = 7e-07
Identities = 26/29 (89%), Positives = 29/29 (100%)
Frame = +3
Query: 621 RVRDVDMKRDYAFVEFSDPRDADDARYSM 707
R+RDVDMKRD+AFVEFSDPRDADDARYS+
Sbjct: 36 RIRDVDMKRDFAFVEFSDPRDADDARYSL 64
>ref|XP_006436157.1| hypothetical protein CICLE_v10032170mg [Citrus clementina]
gi|568865230|ref|XP_006485980.1| PREDICTED:
serine/arginine-rich splicing factor RS2Z33-like isoform
X2 [Citrus sinensis] gi|557538353|gb|ESR49397.1|
hypothetical protein CICLE_v10032170mg [Citrus
clementina]
Length = 312
Score = 60.1 bits (144), Expect = 7e-07
Identities = 26/29 (89%), Positives = 29/29 (100%)
Frame = +3
Query: 621 RVRDVDMKRDYAFVEFSDPRDADDARYSM 707
R+RDVDMKRD+AFVEFSDPRDADDARYS+
Sbjct: 36 RIRDVDMKRDFAFVEFSDPRDADDARYSL 64
>ref|XP_006436154.1| hypothetical protein CICLE_v10032170mg [Citrus clementina]
gi|568865232|ref|XP_006485981.1| PREDICTED:
serine/arginine-rich splicing factor RS2Z33-like isoform
X3 [Citrus sinensis] gi|557538350|gb|ESR49394.1|
hypothetical protein CICLE_v10032170mg [Citrus
clementina]
Length = 311
Score = 60.1 bits (144), Expect = 7e-07
Identities = 26/29 (89%), Positives = 29/29 (100%)
Frame = +3
Query: 621 RVRDVDMKRDYAFVEFSDPRDADDARYSM 707
R+RDVDMKRD+AFVEFSDPRDADDARYS+
Sbjct: 36 RIRDVDMKRDFAFVEFSDPRDADDARYSL 64
>ref|XP_002525221.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223535518|gb|EEF37187.1| arginine/serine-rich
splicing factor, putative [Ricinus communis]
Length = 305
Score = 60.1 bits (144), Expect = 7e-07
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +3
Query: 621 RVRDVDMKRDYAFVEFSDPRDADDARYSM 707
RVRDVDMKRDYAFVEFSDPRDADDARY +
Sbjct: 36 RVRDVDMKRDYAFVEFSDPRDADDARYHL 64
>ref|NP_190918.3| serine/arginine-rich splicing factor RS2Z32 [Arabidopsis thaliana]
gi|75334513|sp|Q9FYB7.1|RSZ32_ARATH RecName:
Full=Serine/arginine-rich splicing factor RS2Z32;
AltName: Full=RS-containing zinc finger protein 32;
Short=At-RS2Z32; Short=At-RSZ32
gi|9795142|emb|CAB67657.2| splicing factor-like protein
[Arabidopsis thaliana] gi|222422875|dbj|BAH19424.1|
AT3G53500 [Arabidopsis thaliana]
gi|332645577|gb|AEE79098.1| serine/arginine-rich
splicing factor RS2Z32 [Arabidopsis thaliana]
Length = 284
Score = 59.7 bits (143), Expect = 9e-07
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3
Query: 621 RVRDVDMKRDYAFVEFSDPRDADDARY 701
RVRDVDMKRDYAFVEFSDPRDADDARY
Sbjct: 36 RVRDVDMKRDYAFVEFSDPRDADDARY 62