BLASTX nr result
ID: Catharanthus22_contig00009355
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus22_contig00009355 (575 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004250726.1| PREDICTED: signal recognition particle recep... 56 6e-06 ref|XP_002265544.2| PREDICTED: signal recognition particle recep... 56 6e-06 ref|XP_006349023.1| PREDICTED: signal recognition particle recep... 56 8e-06 ref|XP_006344449.1| PREDICTED: signal recognition particle recep... 56 8e-06 >ref|XP_004250726.1| PREDICTED: signal recognition particle receptor subunit beta-like [Solanum lycopersicum] Length = 261 Score = 56.2 bits (134), Expect = 6e-06 Identities = 25/44 (56%), Positives = 33/44 (75%) Frame = +3 Query: 444 HNMVGYIFVKIFFDIVVRLFKRKSRNTIVLTGLSGSGKTFLFYQ 575 + VG + + +++RLFKR + NTIVLTGLSGSGKT+LFYQ Sbjct: 33 YTAVGVVLFTLILLLIIRLFKRTTSNTIVLTGLSGSGKTYLFYQ 76 >ref|XP_002265544.2| PREDICTED: signal recognition particle receptor subunit beta-like [Vitis vinifera] gi|297739076|emb|CBI28565.3| unnamed protein product [Vitis vinifera] Length = 259 Score = 56.2 bits (134), Expect = 6e-06 Identities = 26/41 (63%), Positives = 31/41 (75%) Frame = +3 Query: 453 VGYIFVKIFFDIVVRLFKRKSRNTIVLTGLSGSGKTFLFYQ 575 + +FV FF + +RLFKR NT+VLTGLSGSGKT LFYQ Sbjct: 34 IAVVFVTTFFLLSIRLFKRTKSNTVVLTGLSGSGKTTLFYQ 74 >ref|XP_006349023.1| PREDICTED: signal recognition particle receptor subunit beta-like isoform X1 [Solanum tuberosum] gi|565364633|ref|XP_006349024.1| PREDICTED: signal recognition particle receptor subunit beta-like isoform X2 [Solanum tuberosum] gi|565364635|ref|XP_006349025.1| PREDICTED: signal recognition particle receptor subunit beta-like isoform X3 [Solanum tuberosum] Length = 261 Score = 55.8 bits (133), Expect = 8e-06 Identities = 25/44 (56%), Positives = 33/44 (75%) Frame = +3 Query: 444 HNMVGYIFVKIFFDIVVRLFKRKSRNTIVLTGLSGSGKTFLFYQ 575 + VG + + +++RLFKR + NTIVLTGLSGSGKT+LFYQ Sbjct: 33 YTAVGVVLSTLILLLIIRLFKRTTSNTIVLTGLSGSGKTYLFYQ 76 >ref|XP_006344449.1| PREDICTED: signal recognition particle receptor subunit beta-like isoform X1 [Solanum tuberosum] gi|565355118|ref|XP_006344450.1| PREDICTED: signal recognition particle receptor subunit beta-like isoform X2 [Solanum tuberosum] Length = 268 Score = 55.8 bits (133), Expect = 8e-06 Identities = 25/44 (56%), Positives = 33/44 (75%) Frame = +3 Query: 444 HNMVGYIFVKIFFDIVVRLFKRKSRNTIVLTGLSGSGKTFLFYQ 575 + VG + + +++RLFKR + NTIVLTGLSGSGKT+LFYQ Sbjct: 40 YTAVGVVLSTLILLLIIRLFKRTTSNTIVLTGLSGSGKTYLFYQ 83