BLASTX nr result
ID: Catharanthus22_contig00009312
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00009312
(1239 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001274939.1| U2 small nuclear ribonucleoprotein A'-like [... 347 8e-93
ref|XP_004235867.1| PREDICTED: U2 small nuclear ribonucleoprotei... 340 5e-91
ref|XP_002512712.1| U2 small nuclear ribonucleoprotein A, putati... 324 5e-86
ref|XP_002275396.1| PREDICTED: U2 small nuclear ribonucleoprotei... 320 6e-85
gb|EMJ25439.1| hypothetical protein PRUPE_ppa018334mg, partial [... 320 8e-85
gb|EOX94114.1| U2 small nuclear ribonucleoprotein A [Theobroma c... 315 2e-83
gb|ADG27843.1| U2 small nuclear ribonucleoprotein A [Gossypium h... 313 1e-82
ref|XP_006423874.1| hypothetical protein CICLE_v10028992mg [Citr... 309 2e-81
ref|XP_002303732.1| predicted protein [Populus trichocarpa] gi|5... 309 2e-81
ref|XP_006487666.1| PREDICTED: U2 small nuclear ribonucleoprotei... 308 2e-81
ref|XP_004157628.1| PREDICTED: U2 small nuclear ribonucleoprotei... 308 3e-81
ref|XP_004140564.1| PREDICTED: U2 small nuclear ribonucleoprotei... 308 3e-81
ref|XP_002299368.1| U2 small nuclear ribonucleoprotein A' [Popul... 307 5e-81
ref|XP_006844771.1| hypothetical protein AMTR_s00016p00258810 [A... 306 9e-81
gb|ADN33688.1| u2 small nuclear ribonucleoprotein a [Cucumis mel... 305 3e-80
ref|XP_004297006.1| PREDICTED: U2 small nuclear ribonucleoprotei... 303 7e-80
ref|XP_006423873.1| hypothetical protein CICLE_v10028992mg [Citr... 298 4e-78
gb|EXC32355.1| U2 small nuclear ribonucleoprotein A' [Morus nota... 295 3e-77
ref|NP_001239826.1| uncharacterized protein LOC100803110 [Glycin... 294 4e-77
gb|AFK43933.1| unknown [Lotus japonicus] 291 5e-76
>ref|NP_001274939.1| U2 small nuclear ribonucleoprotein A'-like [Solanum tuberosum]
gi|77416949|gb|ABA81870.1| unknown [Solanum tuberosum]
Length = 286
Score = 347 bits (889), Expect = 8e-93
Identities = 193/288 (67%), Positives = 210/288 (72%)
Frame = -1
Query: 1140 MVRITADLIGKSPHFFNAIRERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 961
MVR+TADLI KSPHFFNAIRERELDLRGNKI VIENLGATEDQFDTIDLSDNEIVKLENF
Sbjct: 1 MVRLTADLIWKSPHFFNAIRERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENF 60
Query: 960 PYXXXXXXXXXXXXXXXXXXXXXGELLPKXXXXXXXXXXXXXLVEIDPLATLPNLKFLSL 781
PY GE LPK LVEIDPLA+LP LKFLSL
Sbjct: 61 PYLNRLGTLLMNNNRITRINPNIGEFLPKLHTLIITSNRLTNLVEIDPLASLPKLKFLSL 120
Query: 780 LDNNITKKPNYRLYVIHKLKSLRLLDFRKVKQKERQEANNMFASEEAEEEAKIVSVKTFV 601
L+NNITK+PNYRLYVIHKLKSLRLLDFRKVKQKER EA+ +FAS+EAEE+ K SVKT V
Sbjct: 121 LENNITKRPNYRLYVIHKLKSLRLLDFRKVKQKERLEASKLFASQEAEEQVKKESVKT-V 179
Query: 600 PGEVPTXXXXXXXXXXXXXAGPTPEQIIAIKAAIVNSQTLEEVARLEQALRTGQLPADLN 421
P EV PTPEQIIAIKAAIVNSQTLEEVARLEQAL++GQLPADLN
Sbjct: 180 PVEVAVPAEEPKEAQASKPVAPTPEQIIAIKAAIVNSQTLEEVARLEQALKSGQLPADLN 239
Query: 420 IGEHDAAATTANAKEDEMVTDEEKETNDGPKDAKPESKNDGPEDMEQE 277
IG+HD A +AKED+MVTD + + N ++ PE K DGP DMEQE
Sbjct: 240 IGDHDVTAKKEDAKEDKMVTDSDDKANKAEENV-PEQKPDGPTDMEQE 286
>ref|XP_004235867.1| PREDICTED: U2 small nuclear ribonucleoprotein A'-like [Solanum
lycopersicum]
Length = 286
Score = 340 bits (873), Expect = 5e-91
Identities = 191/288 (66%), Positives = 208/288 (72%)
Frame = -1
Query: 1140 MVRITADLIGKSPHFFNAIRERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 961
MVR+TADLI KSPHFFNAIRERELDLRGNKI VIENLGATEDQFDTIDLSDNEIVKLENF
Sbjct: 1 MVRLTADLIWKSPHFFNAIRERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENF 60
Query: 960 PYXXXXXXXXXXXXXXXXXXXXXGELLPKXXXXXXXXXXXXXLVEIDPLATLPNLKFLSL 781
PY GE LPK LVEIDPLA+LP LKFLSL
Sbjct: 61 PYLNRLGTLLMNNNRITRINPNIGEFLPKLHTLIITSNRLTNLVEIDPLASLPKLKFLSL 120
Query: 780 LDNNITKKPNYRLYVIHKLKSLRLLDFRKVKQKERQEANNMFASEEAEEEAKIVSVKTFV 601
L+NNITK+PNYRLYVIHKLKSLRLLDFRKVKQKER EA+ +FAS+EA E+ K SVKT V
Sbjct: 121 LENNITKRPNYRLYVIHKLKSLRLLDFRKVKQKERLEASKLFASQEAVEQVKKESVKT-V 179
Query: 600 PGEVPTXXXXXXXXXXXXXAGPTPEQIIAIKAAIVNSQTLEEVARLEQALRTGQLPADLN 421
P EV PTPEQIIAIKAAIVNSQTLEEVARLEQAL++GQLPADLN
Sbjct: 180 PVEVAAPAEEPKEAQASKPVAPTPEQIIAIKAAIVNSQTLEEVARLEQALKSGQLPADLN 239
Query: 420 IGEHDAAATTANAKEDEMVTDEEKETNDGPKDAKPESKNDGPEDMEQE 277
IG+HD A +AKED+MVTD + + N ++ PE DGP DMEQE
Sbjct: 240 IGDHDVTAKKEDAKEDKMVTDSDDKANKVEENV-PEQTPDGPTDMEQE 286
>ref|XP_002512712.1| U2 small nuclear ribonucleoprotein A, putative [Ricinus communis]
gi|223548673|gb|EEF50164.1| U2 small nuclear
ribonucleoprotein A, putative [Ricinus communis]
Length = 287
Score = 324 bits (830), Expect = 5e-86
Identities = 177/288 (61%), Positives = 201/288 (69%)
Frame = -1
Query: 1140 MVRITADLIGKSPHFFNAIRERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 961
MVR+TADLI KSPHFFNAI+ERELDLRGNKI VIENLGATEDQFDTIDLSDNEIVKLEN
Sbjct: 1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENM 60
Query: 960 PYXXXXXXXXXXXXXXXXXXXXXGELLPKXXXXXXXXXXXXXLVEIDPLATLPNLKFLSL 781
PY GE LPK LVEIDPLA+LP L+FLSL
Sbjct: 61 PYLTRLGTLLINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLASLPKLQFLSL 120
Query: 780 LDNNITKKPNYRLYVIHKLKSLRLLDFRKVKQKERQEANNMFASEEAEEEAKIVSVKTFV 601
LDN+ITKKPNYRLY+IHKLKSLR+LDF+KVK KER EA N+FAS+E EEEA S KTF+
Sbjct: 121 LDNSITKKPNYRLYIIHKLKSLRVLDFKKVKSKERMEAENLFASKEVEEEAIRESAKTFI 180
Query: 600 PGEVPTXXXXXXXXXXXXXAGPTPEQIIAIKAAIVNSQTLEEVARLEQALRTGQLPADLN 421
PGEVP PTPEQIIAIKAAIVNSQTLEEVARLE+AL +GQ+P DLN
Sbjct: 181 PGEVPNVTEDAEEQQNPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKALNSGQIPTDLN 240
Query: 420 IGEHDAAATTANAKEDEMVTDEEKETNDGPKDAKPESKNDGPEDMEQE 277
I ++D+ T K+D+M TD + +T+ P + E K+ MEQE
Sbjct: 241 IFDNDSELNTVQEKDDKMATDGDNKTDHEPSNL-DEQKDSDSASMEQE 287
>ref|XP_002275396.1| PREDICTED: U2 small nuclear ribonucleoprotein A' [Vitis vinifera]
gi|296085571|emb|CBI29303.3| unnamed protein product
[Vitis vinifera]
Length = 287
Score = 320 bits (821), Expect = 6e-85
Identities = 176/288 (61%), Positives = 199/288 (69%)
Frame = -1
Query: 1140 MVRITADLIGKSPHFFNAIRERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 961
MVR+TADLI KSPHFFNAIRERELDLRGNK+AVIENLGATEDQFDTIDLSDNEIVKLEN
Sbjct: 1 MVRLTADLIWKSPHFFNAIRERELDLRGNKVAVIENLGATEDQFDTIDLSDNEIVKLENL 60
Query: 960 PYXXXXXXXXXXXXXXXXXXXXXGELLPKXXXXXXXXXXXXXLVEIDPLATLPNLKFLSL 781
PY GE LPK L EIDPL++ P L+FLSL
Sbjct: 61 PYLNRLGTLLINNNRITRINPNIGEYLPKLHTLVLTNNRLVNLAEIDPLSSFPKLQFLSL 120
Query: 780 LDNNITKKPNYRLYVIHKLKSLRLLDFRKVKQKERQEANNMFASEEAEEEAKIVSVKTFV 601
LDNNITKKPNYRLYVIH+LKSLRLLDF+KVK KER EA N+FAS+E EEEAK +KTF
Sbjct: 121 LDNNITKKPNYRLYVIHRLKSLRLLDFKKVKNKERLEAENLFASKEVEEEAKQEPLKTFT 180
Query: 600 PGEVPTXXXXXXXXXXXXXAGPTPEQIIAIKAAIVNSQTLEEVARLEQALRTGQLPADLN 421
PGE+P GP+PE++IAIKAAIVNSQTLEEVARLE+AL++GQLPADL
Sbjct: 181 PGEMPNALEPAEEQQIPKVVGPSPEELIAIKAAIVNSQTLEEVARLEKALKSGQLPADLK 240
Query: 420 IGEHDAAATTANAKEDEMVTDEEKETNDGPKDAKPESKNDGPEDMEQE 277
+ A N K+D+MV+ + D PK + E KND MEQE
Sbjct: 241 SLVENTRADVVNEKDDKMVSSNPNTSRDEPKTVE-EQKNDDVAPMEQE 287
>gb|EMJ25439.1| hypothetical protein PRUPE_ppa018334mg, partial [Prunus persica]
Length = 285
Score = 320 bits (820), Expect = 8e-85
Identities = 178/287 (62%), Positives = 197/287 (68%)
Frame = -1
Query: 1140 MVRITADLIGKSPHFFNAIRERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 961
MVR+TADL+ KSPHFFNA++ERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLEN
Sbjct: 1 MVRLTADLVWKSPHFFNALKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENL 60
Query: 960 PYXXXXXXXXXXXXXXXXXXXXXGELLPKXXXXXXXXXXXXXLVEIDPLATLPNLKFLSL 781
PY GE LPK LVEIDPL +LP L+FLSL
Sbjct: 61 PYLNRLGTLIINNNRITRINPNIGEFLPKLHTLILTNNRLVNLVEIDPLESLPKLQFLSL 120
Query: 780 LDNNITKKPNYRLYVIHKLKSLRLLDFRKVKQKERQEANNMFASEEAEEEAKIVSVKTFV 601
LDNNITKKPNYRLYVIHKLKSLR+LDF+KVK KER EA +F+S+E EEE K VS KTFV
Sbjct: 121 LDNNITKKPNYRLYVIHKLKSLRVLDFKKVKNKERLEAQTLFSSKEVEEETKKVSAKTFV 180
Query: 600 PGEVPTXXXXXXXXXXXXXAGPTPEQIIAIKAAIVNSQTLEEVARLEQALRTGQLPADLN 421
P EVP PTPEQI+AIKAAIVNSQTLEEVARLEQAL++GQLPADL
Sbjct: 181 PTEVPNVSDVAEEQQTPKVVAPTPEQIMAIKAAIVNSQTLEEVARLEQALKSGQLPADLK 240
Query: 420 IGEHDAAATTANAKEDEMVTDEEKETNDGPKDAKPESKNDGPEDMEQ 280
I + D + +D+M + E E N PKD E K D E MEQ
Sbjct: 241 ILDDDTETNSVKVNDDKMEVNSENEAN-APKDV-DEQKKDEAEPMEQ 285
>gb|EOX94114.1| U2 small nuclear ribonucleoprotein A [Theobroma cacao]
Length = 286
Score = 315 bits (808), Expect = 2e-83
Identities = 175/288 (60%), Positives = 202/288 (70%)
Frame = -1
Query: 1140 MVRITADLIGKSPHFFNAIRERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 961
MV++TADLI KSPHFFNA++ERELDLRGNKIAV+ENLGATEDQFDTIDLSDNEIVKL+NF
Sbjct: 1 MVKLTADLIWKSPHFFNALKERELDLRGNKIAVMENLGATEDQFDTIDLSDNEIVKLDNF 60
Query: 960 PYXXXXXXXXXXXXXXXXXXXXXGELLPKXXXXXXXXXXXXXLVEIDPLATLPNLKFLSL 781
PY GE LPK LVEIDPL++LP L+FLSL
Sbjct: 61 PYLNRLGTLLINNNRVTRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLSSLPKLEFLSL 120
Query: 780 LDNNITKKPNYRLYVIHKLKSLRLLDFRKVKQKERQEANNMFASEEAEEEAKIVSVKTFV 601
LDNNITKKPNYRLYVI+KLKSLR+LDF+KVK KER EA N+FAS+E EEE K S KTF
Sbjct: 121 LDNNITKKPNYRLYVIYKLKSLRVLDFKKVKVKERLEAENLFASKEVEEEMKKESAKTFT 180
Query: 600 PGEVPTXXXXXXXXXXXXXAGPTPEQIIAIKAAIVNSQTLEEVARLEQALRTGQLPADLN 421
P EVP PTPEQI+AIKAAIVNSQTLEEVARLE+AL+TGQLPADL
Sbjct: 181 PEEVPKVSEVAQEEQMPKVVAPTPEQILAIKAAIVNSQTLEEVARLEKALKTGQLPADLK 240
Query: 420 IGEHDAAATTANAKEDEMVTDEEKETNDGPKDAKPESKNDGPEDMEQE 277
I D A K+++ V+D + ++N P + + E KN+ P MEQE
Sbjct: 241 IPGDDTGA-NVTGKDEKKVSDSQNKSNVEPNNVE-EQKNEEPVPMEQE 286
>gb|ADG27843.1| U2 small nuclear ribonucleoprotein A [Gossypium hirsutum]
Length = 285
Score = 313 bits (801), Expect = 1e-82
Identities = 177/288 (61%), Positives = 199/288 (69%)
Frame = -1
Query: 1140 MVRITADLIGKSPHFFNAIRERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 961
MV++TADLI K PHFFNA++ERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKL+NF
Sbjct: 1 MVKLTADLIWKCPHFFNALKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLDNF 60
Query: 960 PYXXXXXXXXXXXXXXXXXXXXXGELLPKXXXXXXXXXXXXXLVEIDPLATLPNLKFLSL 781
PY GE LP LVEIDPL++LP L+FLSL
Sbjct: 61 PYLKRLGTLLINNNRVTRINPNIGEFLPNLHTLVLTNNRLVNLVEIDPLSSLPKLQFLSL 120
Query: 780 LDNNITKKPNYRLYVIHKLKSLRLLDFRKVKQKERQEANNMFASEEAEEEAKIVSVKTFV 601
LDNNITKKPNYRLYVIHKLKSLR+LDF+KVK KER EA N+FAS+EAEEE K S KT
Sbjct: 121 LDNNITKKPNYRLYVIHKLKSLRVLDFKKVKAKERLEAENLFASKEAEEEIKKESTKTVA 180
Query: 600 PGEVPTXXXXXXXXXXXXXAGPTPEQIIAIKAAIVNSQTLEEVARLEQALRTGQLPADLN 421
P EVP PTPEQI+AIKAAIVNSQTLEEVARLE+AL+TGQLPADL
Sbjct: 181 PKEVPNVSEVAEEEQMPKVVAPTPEQILAIKAAIVNSQTLEEVARLEKALQTGQLPADLK 240
Query: 420 IGEHDAAATTANAKEDEMVTDEEKETNDGPKDAKPESKNDGPEDMEQE 277
I D A A +++ V+D + E+N P D E KN+ P MEQE
Sbjct: 241 IPGDDTNA--AKGGDEKKVSDIQNESNVEP-DNMDEDKNEEPAPMEQE 285
>ref|XP_006423874.1| hypothetical protein CICLE_v10028992mg [Citrus clementina]
gi|557525808|gb|ESR37114.1| hypothetical protein
CICLE_v10028992mg [Citrus clementina]
Length = 286
Score = 309 bits (791), Expect = 2e-81
Identities = 174/288 (60%), Positives = 200/288 (69%)
Frame = -1
Query: 1140 MVRITADLIGKSPHFFNAIRERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 961
MVR+TADLI KSPHFFNAI+ERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLEN
Sbjct: 1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENM 60
Query: 960 PYXXXXXXXXXXXXXXXXXXXXXGELLPKXXXXXXXXXXXXXLVEIDPLATLPNLKFLSL 781
P+ GE LPK LVEIDPL +LP L+FLSL
Sbjct: 61 PHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSL 120
Query: 780 LDNNITKKPNYRLYVIHKLKSLRLLDFRKVKQKERQEANNMFASEEAEEEAKIVSVKTFV 601
LDN+ITKKPNYRLYVIHKLKSLR+LDF+KVK KER EA ++FASEE EEEAK S+KT +
Sbjct: 121 LDNSITKKPNYRLYVIHKLKSLRVLDFKKVKNKERMEAASLFASEEMEEEAKKESMKTLM 180
Query: 600 PGEVPTXXXXXXXXXXXXXAGPTPEQIIAIKAAIVNSQTLEEVARLEQALRTGQLPADLN 421
P EVP PTPEQIIAIKAAIVNSQTLEEVARLE+ L++GQLPADL
Sbjct: 181 PVEVPN-VSEEEEQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEEVLKSGQLPADLK 239
Query: 420 IGEHDAAATTANAKEDEMVTDEEKETNDGPKDAKPESKNDGPEDMEQE 277
I ++D+ + +++MV D E E + P + + KND MEQ+
Sbjct: 240 IPDYDSGSKDVKENDEKMVPDVENEADVEPNNVE-NQKNDELAAMEQD 286
>ref|XP_002303732.1| predicted protein [Populus trichocarpa]
gi|566256109|ref|XP_006388045.1| U2 small nuclear
ribonucleoprotein A' [Populus trichocarpa]
gi|550309315|gb|ERP46959.1| U2 small nuclear
ribonucleoprotein A' [Populus trichocarpa]
Length = 284
Score = 309 bits (791), Expect = 2e-81
Identities = 173/288 (60%), Positives = 198/288 (68%)
Frame = -1
Query: 1140 MVRITADLIGKSPHFFNAIRERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 961
MVR+TADLI KSPHFFNAI+ERELDLRGNKI VIENLGATEDQFDTIDLSDNEIVKLEN
Sbjct: 1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENM 60
Query: 960 PYXXXXXXXXXXXXXXXXXXXXXGELLPKXXXXXXXXXXXXXLVEIDPLATLPNLKFLSL 781
PY GE LPK L EIDPL++LP L+FLSL
Sbjct: 61 PYLNRLGTLIINNNRITRINPNIGEYLPKLHTLVLTNNRLVNLAEIDPLSSLPKLQFLSL 120
Query: 780 LDNNITKKPNYRLYVIHKLKSLRLLDFRKVKQKERQEANNMFASEEAEEEAKIVSVKTFV 601
LDN ITKKPNYRLYVIHKLKSLR+LDF+KVK KER EA ++F+S+E EEEAK SVKTF
Sbjct: 121 LDNTITKKPNYRLYVIHKLKSLRVLDFKKVKAKERAEAEHLFSSKEVEEEAKRESVKTFT 180
Query: 600 PGEVPTXXXXXXXXXXXXXAGPTPEQIIAIKAAIVNSQTLEEVARLEQALRTGQLPADLN 421
PGE+P PTPEQIIAIKAAIVNSQTLEEVARLE+AL +GQLPADL
Sbjct: 181 PGEIPNIPEVAEEQQAPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKALNSGQLPADLK 240
Query: 420 IGEHDAAATTANAKEDEMVTDEEKETNDGPKDAKPESKNDGPEDMEQE 277
I + D + + ++D+M TD + N+ + E K++ MEQE
Sbjct: 241 ILD-DTGSNSVKEQDDKMATDSQ---NEAEPNNLEEQKDNEATPMEQE 284
>ref|XP_006487666.1| PREDICTED: U2 small nuclear ribonucleoprotein A'-like [Citrus
sinensis]
Length = 286
Score = 308 bits (790), Expect = 2e-81
Identities = 174/288 (60%), Positives = 200/288 (69%)
Frame = -1
Query: 1140 MVRITADLIGKSPHFFNAIRERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 961
MVR+TADLI KSPHFFNAI+ERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLEN
Sbjct: 1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENM 60
Query: 960 PYXXXXXXXXXXXXXXXXXXXXXGELLPKXXXXXXXXXXXXXLVEIDPLATLPNLKFLSL 781
P+ GE LPK LVEIDPL +LP L+FLSL
Sbjct: 61 PHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSL 120
Query: 780 LDNNITKKPNYRLYVIHKLKSLRLLDFRKVKQKERQEANNMFASEEAEEEAKIVSVKTFV 601
LDN+ITKKPNYRLYVIHKLKSLR+LDF+KVK KER EA ++FASEE EEEAK S+KT +
Sbjct: 121 LDNSITKKPNYRLYVIHKLKSLRVLDFKKVKNKERMEAASLFASEEMEEEAKKESMKTLM 180
Query: 600 PGEVPTXXXXXXXXXXXXXAGPTPEQIIAIKAAIVNSQTLEEVARLEQALRTGQLPADLN 421
P EVP PTPEQIIAIKAAIVNSQTLEEVARLE+ L++GQLPADL
Sbjct: 181 PVEVPN-VSEEEEQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKVLKSGQLPADLK 239
Query: 420 IGEHDAAATTANAKEDEMVTDEEKETNDGPKDAKPESKNDGPEDMEQE 277
I ++D+ + +++MV D E E + P + + KND MEQ+
Sbjct: 240 IPDYDSGSKDVKENDEKMVPDVENEADVEPNNVE-NQKNDELAAMEQD 286
>ref|XP_004157628.1| PREDICTED: U2 small nuclear ribonucleoprotein A'-like, partial
[Cucumis sativus]
Length = 275
Score = 308 bits (789), Expect = 3e-81
Identities = 172/271 (63%), Positives = 192/271 (70%), Gaps = 3/271 (1%)
Frame = -1
Query: 1140 MVRITADLIGKSPHFFNAIRERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 961
MVR+T DLI KSPHFFNAI+ERELDLRGNKIAVIENLGATEDQFD IDLSDNEIVKLEN
Sbjct: 1 MVRLTVDLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDAIDLSDNEIVKLENM 60
Query: 960 PYXXXXXXXXXXXXXXXXXXXXXGELLPKXXXXXXXXXXXXXLVEIDPLATLPNLKFLSL 781
PY GE LP LVEIDPLA+L L+FLSL
Sbjct: 61 PYLNRLGTLLINNNRITRINPNIGEFLPNLHTLVLTNNRLVNLVEIDPLASLSKLQFLSL 120
Query: 780 LDNNITKKPNYRLYVIHKLKSLRLLDFRKVKQKERQEANNMFASEEAEEEAKIVSVKTFV 601
LDNNITKKPNYRLYVIHKLKS+R+LDF+KV+ KER EA N+F+S+E EEEAK SVKTFV
Sbjct: 121 LDNNITKKPNYRLYVIHKLKSVRVLDFKKVRNKERLEARNLFSSKEVEEEAKKESVKTFV 180
Query: 600 PGEVPTXXXXXXXXXXXXXAGPTPEQIIAIKAAIVNSQTLEEVARLEQALRTGQLPADLN 421
PGEV + PTPEQIIAIKAAIVNSQTLEEVARLEQAL++GQLPADLN
Sbjct: 181 PGEVEKASKPVEEKQTPNVSAPTPEQIIAIKAAIVNSQTLEEVARLEQALKSGQLPADLN 240
Query: 420 IGEHDAAATTANAKEDEMVT---DEEKETND 337
+ E + A K+D+ ++ DEE TND
Sbjct: 241 LLEDNTAQNITKDKDDKTMSDSGDEEHVTND 271
>ref|XP_004140564.1| PREDICTED: U2 small nuclear ribonucleoprotein A'-like [Cucumis
sativus]
Length = 279
Score = 308 bits (789), Expect = 3e-81
Identities = 172/271 (63%), Positives = 192/271 (70%), Gaps = 3/271 (1%)
Frame = -1
Query: 1140 MVRITADLIGKSPHFFNAIRERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 961
MVR+T DLI KSPHFFNAI+ERELDLRGNKIAVIENLGATEDQFD IDLSDNEIVKLEN
Sbjct: 1 MVRLTVDLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDAIDLSDNEIVKLENM 60
Query: 960 PYXXXXXXXXXXXXXXXXXXXXXGELLPKXXXXXXXXXXXXXLVEIDPLATLPNLKFLSL 781
PY GE LP LVEIDPLA+L L+FLSL
Sbjct: 61 PYLNRLGTLLINNNRITRINPNIGEFLPNLHTLVLTNNRLVNLVEIDPLASLSKLQFLSL 120
Query: 780 LDNNITKKPNYRLYVIHKLKSLRLLDFRKVKQKERQEANNMFASEEAEEEAKIVSVKTFV 601
LDNNITKKPNYRLYVIHKLKS+R+LDF+KV+ KER EA N+F+S+E EEEAK SVKTFV
Sbjct: 121 LDNNITKKPNYRLYVIHKLKSVRVLDFKKVRNKERLEARNLFSSKEVEEEAKKESVKTFV 180
Query: 600 PGEVPTXXXXXXXXXXXXXAGPTPEQIIAIKAAIVNSQTLEEVARLEQALRTGQLPADLN 421
PGEV + PTPEQIIAIKAAIVNSQTLEEVARLEQAL++GQLPADLN
Sbjct: 181 PGEVEKASKPVEEKQTPNVSAPTPEQIIAIKAAIVNSQTLEEVARLEQALKSGQLPADLN 240
Query: 420 IGEHDAAATTANAKEDEMVT---DEEKETND 337
+ E + A K+D+ ++ DEE TND
Sbjct: 241 LLEDNTAQNITKDKDDKTMSDSGDEEHVTND 271
>ref|XP_002299368.1| U2 small nuclear ribonucleoprotein A' [Populus trichocarpa]
gi|222846626|gb|EEE84173.1| U2 small nuclear
ribonucleoprotein A' [Populus trichocarpa]
Length = 284
Score = 307 bits (787), Expect = 5e-81
Identities = 173/288 (60%), Positives = 197/288 (68%)
Frame = -1
Query: 1140 MVRITADLIGKSPHFFNAIRERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 961
MVR+TADL+ KSPHFFNAI+ERELDLRGNKI VIENLGATEDQFDTIDLSDNEIVKLEN
Sbjct: 1 MVRLTADLVWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENM 60
Query: 960 PYXXXXXXXXXXXXXXXXXXXXXGELLPKXXXXXXXXXXXXXLVEIDPLATLPNLKFLSL 781
PY GE LPK L EIDPLA+LP L FLSL
Sbjct: 61 PYLNRLGTLIINNNRITRINPNIGEYLPKLHTLVLINNRLVNLAEIDPLASLPKLHFLSL 120
Query: 780 LDNNITKKPNYRLYVIHKLKSLRLLDFRKVKQKERQEANNMFASEEAEEEAKIVSVKTFV 601
LDNNITKKPNYRLYVIHKLKSLR+LDF+KVK KER EA ++FAS+E EEEA+ SVKTF
Sbjct: 121 LDNNITKKPNYRLYVIHKLKSLRVLDFKKVKGKERAEAEHLFASKEVEEEARRESVKTFT 180
Query: 600 PGEVPTXXXXXXXXXXXXXAGPTPEQIIAIKAAIVNSQTLEEVARLEQALRTGQLPADLN 421
PGEVP PTP+QIIAIKAAIVNSQTLEEVARLE+AL +GQLPADL
Sbjct: 181 PGEVPNVLEGAEEQQAPKVVAPTPDQIIAIKAAIVNSQTLEEVARLEKALNSGQLPADLK 240
Query: 420 IGEHDAAATTANAKEDEMVTDEEKETNDGPKDAKPESKNDGPEDMEQE 277
I + + + ++D+M TD + N+ + E K++ MEQE
Sbjct: 241 ILD-GTGSNSVKEQDDKMATDNQ---NEAEPNNLEEQKDNEATPMEQE 284
>ref|XP_006844771.1| hypothetical protein AMTR_s00016p00258810 [Amborella trichopoda]
gi|548847242|gb|ERN06446.1| hypothetical protein
AMTR_s00016p00258810 [Amborella trichopoda]
Length = 300
Score = 306 bits (785), Expect = 9e-81
Identities = 172/301 (57%), Positives = 207/301 (68%), Gaps = 1/301 (0%)
Frame = -1
Query: 1140 MVRITADLIGKSPHFFNAIRERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 961
MVR+TADLI K PHFFNA+ +RELDLRGNKIAVIENLGATEDQFD+IDLSDNEIVKLENF
Sbjct: 1 MVRLTADLIWKCPHFFNAVGDRELDLRGNKIAVIENLGATEDQFDSIDLSDNEIVKLENF 60
Query: 960 PYXXXXXXXXXXXXXXXXXXXXXGELLPKXXXXXXXXXXXXXLVEIDPLATLPNLKFLSL 781
PY G LPK LV++DPLA+LP L+ LSL
Sbjct: 61 PYLSRLGTLFINNNRITRININLGAYLPKLHTLILTNNRLVNLVDLDPLASLPKLQNLSL 120
Query: 780 LDNNITKKPNYRLYVIHKLKSLRLLDFRKVKQKERQEANNMFASEEAEEEAKIVSVKTFV 601
LDNN+TKKPNYRLYVI+KLK L +LDF+KVKQKE+ EA +FAS+EAEE AK SV TF
Sbjct: 121 LDNNVTKKPNYRLYVIYKLKKLWVLDFKKVKQKEKMEAEKLFASKEAEENAKKESVATFT 180
Query: 600 PGEVPTXXXXXXXXXXXXXAGPTPEQIIAIKAAIVNSQTLEEVARLEQALRTGQLPADLN 421
PGEVP +GPTPEQIIAIKAAIVNSQTLEEVARLE+AL++GQLPADL
Sbjct: 181 PGEVPN-ISEVPKEEPPKVSGPTPEQIIAIKAAIVNSQTLEEVARLEKALKSGQLPADLK 239
Query: 420 IGEHDAAATTANAKEDE-MVTDEEKETNDGPKDAKPESKNDGPEDMEQE*RRSIQELKQS 244
I + D A + + D+ M T+ +++ ND PKD + + D + + +I+ELKQ+
Sbjct: 240 IPDVDKATIAEHVESDDPMDTEGQEKVNDVPKDDADQLQTDNSGQPQNDNATAIEELKQT 299
Query: 243 R 241
+
Sbjct: 300 K 300
>gb|ADN33688.1| u2 small nuclear ribonucleoprotein a [Cucumis melo subsp. melo]
Length = 279
Score = 305 bits (780), Expect = 3e-80
Identities = 171/271 (63%), Positives = 190/271 (70%), Gaps = 3/271 (1%)
Frame = -1
Query: 1140 MVRITADLIGKSPHFFNAIRERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 961
MVR+T DLI KSPHFFNAI+ERELDLRGNKIAVIENLGATEDQFD IDLSDNEIVKLEN
Sbjct: 1 MVRLTVDLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDAIDLSDNEIVKLENM 60
Query: 960 PYXXXXXXXXXXXXXXXXXXXXXGELLPKXXXXXXXXXXXXXLVEIDPLATLPNLKFLSL 781
PY GE LP LVEIDPLA+L L+FLSL
Sbjct: 61 PYLNRLGTLLINNNRITRINPNIGEFLPNLHTLVLTNNRLVNLVEIDPLASLSKLQFLSL 120
Query: 780 LDNNITKKPNYRLYVIHKLKSLRLLDFRKVKQKERQEANNMFASEEAEEEAKIVSVKTFV 601
LDNNITKKPNYRLYVIHKLKS+R+LDF+KV+ KER EA N+F+S+E EEEAK SVKTFV
Sbjct: 121 LDNNITKKPNYRLYVIHKLKSVRVLDFKKVRNKERLEARNLFSSKEVEEEAKKESVKTFV 180
Query: 600 PGEVPTXXXXXXXXXXXXXAGPTPEQIIAIKAAIVNSQTLEEVARLEQALRTGQLPADLN 421
GEV + PTPEQIIAIKAAIVNSQTLEEVARLEQAL++GQLPADLN
Sbjct: 181 SGEVEKASKPVEEKQTPNVSAPTPEQIIAIKAAIVNSQTLEEVARLEQALKSGQLPADLN 240
Query: 420 IGEHDAAATTANAKEDEMVT---DEEKETND 337
+ E + A K+D+ + DEE TND
Sbjct: 241 LLEDNTAPNITKDKDDKTTSGSGDEEHVTND 271
>ref|XP_004297006.1| PREDICTED: U2 small nuclear ribonucleoprotein A'-like [Fragaria vesca
subsp. vesca]
Length = 284
Score = 303 bits (777), Expect = 7e-80
Identities = 174/288 (60%), Positives = 194/288 (67%)
Frame = -1
Query: 1140 MVRITADLIGKSPHFFNAIRERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 961
MVR+TADLI KSPHFFNA++ERELDLRGNKI VIENLGATEDQFDTIDLSDNEIVKLEN
Sbjct: 1 MVRLTADLIWKSPHFFNALKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENL 60
Query: 960 PYXXXXXXXXXXXXXXXXXXXXXGELLPKXXXXXXXXXXXXXLVEIDPLATLPNLKFLSL 781
PY GE LPK LVEIDPLA+L L++LSL
Sbjct: 61 PYLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLASLSKLQYLSL 120
Query: 780 LDNNITKKPNYRLYVIHKLKSLRLLDFRKVKQKERQEANNMFASEEAEEEAKIVSVKTFV 601
LDNNITKKPNYRLYVIHKLKSLR+LDF+KVK KER EA +F+S+E EEE + VS K FV
Sbjct: 121 LDNNITKKPNYRLYVIHKLKSLRVLDFKKVKDKERLEAKTLFSSKEVEEETRKVSPKKFV 180
Query: 600 PGEVPTXXXXXXXXXXXXXAGPTPEQIIAIKAAIVNSQTLEEVARLEQALRTGQLPADLN 421
P E PT +QI AIKAAIVNSQTLEEVARLEQAL++GQLPADL
Sbjct: 181 PAE---DTEMAEEQQTPKVVVPTQDQINAIKAAIVNSQTLEEVARLEQALKSGQLPADLK 237
Query: 420 IGEHDAAATTANAKEDEMVTDEEKETNDGPKDAKPESKNDGPEDMEQE 277
I + D T K+DEMV E E N KD + E KN+ E M+QE
Sbjct: 238 IMDDDTPTDTGKDKDDEMVVTNENEANAEVKDVE-EQKNNESEPMDQE 284
>ref|XP_006423873.1| hypothetical protein CICLE_v10028992mg [Citrus clementina]
gi|557525807|gb|ESR37113.1| hypothetical protein
CICLE_v10028992mg [Citrus clementina]
Length = 282
Score = 298 bits (762), Expect = 4e-78
Identities = 171/288 (59%), Positives = 197/288 (68%)
Frame = -1
Query: 1140 MVRITADLIGKSPHFFNAIRERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 961
MVR+TADLI KSPHFFNAI+ERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLEN
Sbjct: 1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENM 60
Query: 960 PYXXXXXXXXXXXXXXXXXXXXXGELLPKXXXXXXXXXXXXXLVEIDPLATLPNLKFLSL 781
P+ GE LPK LVEIDPL +LP L+FLSL
Sbjct: 61 PHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSL 120
Query: 780 LDNNITKKPNYRLYVIHKLKSLRLLDFRKVKQKERQEANNMFASEEAEEEAKIVSVKTFV 601
LDN+ITKKPNYRLYVIHKLKSLR+LDF+ KER EA ++FASEE EEEAK S+KT +
Sbjct: 121 LDNSITKKPNYRLYVIHKLKSLRVLDFK----KERMEAASLFASEEMEEEAKKESMKTLM 176
Query: 600 PGEVPTXXXXXXXXXXXXXAGPTPEQIIAIKAAIVNSQTLEEVARLEQALRTGQLPADLN 421
P EVP PTPEQIIAIKAAIVNSQTLEEVARLE+ L++GQLPADL
Sbjct: 177 PVEVPN-VSEEEEQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEEVLKSGQLPADLK 235
Query: 420 IGEHDAAATTANAKEDEMVTDEEKETNDGPKDAKPESKNDGPEDMEQE 277
I ++D+ + +++MV D E E + P + + KND MEQ+
Sbjct: 236 IPDYDSGSKDVKENDEKMVPDVENEADVEPNNVE-NQKNDELAAMEQD 282
>gb|EXC32355.1| U2 small nuclear ribonucleoprotein A' [Morus notabilis]
Length = 315
Score = 295 bits (755), Expect = 3e-77
Identities = 165/290 (56%), Positives = 194/290 (66%), Gaps = 3/290 (1%)
Frame = -1
Query: 1140 MVRITADLIGKSPHFFNAIRERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 961
MVR+TADLI KSPHFFNAI+ERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLEN
Sbjct: 1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENL 60
Query: 960 PYXXXXXXXXXXXXXXXXXXXXXGELLPKXXXXXXXXXXXXXLVEIDPLATLPNLKFLSL 781
PY GE LPK L EIDPLA+LP L+FLSL
Sbjct: 61 PYLNRLGTLLINNNRITRINPNIGEFLPKLHSLVLTNNRLVNLAEIDPLASLPKLQFLSL 120
Query: 780 LDNNITKKPNYRLYVIHKLKSLRLLDFRKVKQKERQEANNMFASEEAEEEAKIVSVKTFV 601
LDNNITKKPNYRLYVIHKL+SLR+LD++K+K KER EA N+FAS++ EE+A S KT
Sbjct: 121 LDNNITKKPNYRLYVIHKLRSLRVLDYKKIKTKERLEAKNLFASKQDEEDAIKESAKTLT 180
Query: 600 P---GEVPTXXXXXXXXXXXXXAGPTPEQIIAIKAAIVNSQTLEEVARLEQALRTGQLPA 430
P +VP PTPEQI AIKAAIVNSQTLEEVARLE+AL++GQLPA
Sbjct: 181 PVDTADVPQAAAAEDEDTTHKVVAPTPEQITAIKAAIVNSQTLEEVARLEKALKSGQLPA 240
Query: 429 DLNIGEHDAAATTANAKEDEMVTDEEKETNDGPKDAKPESKNDGPEDMEQ 280
D + + +A + + ++ V + E E + P+D + + K D MEQ
Sbjct: 241 DFKLSDDNAQSGSIQGTDESKVQNNENEADGEPRDVEGQGK-DESAPMEQ 289
>ref|NP_001239826.1| uncharacterized protein LOC100803110 [Glycine max]
gi|255635750|gb|ACU18224.1| unknown [Glycine max]
Length = 287
Score = 294 bits (753), Expect = 4e-77
Identities = 166/288 (57%), Positives = 188/288 (65%)
Frame = -1
Query: 1140 MVRITADLIGKSPHFFNAIRERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 961
MVR+TADLI KSPHFFN I+ERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLEN
Sbjct: 1 MVRLTADLIWKSPHFFNTIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENV 60
Query: 960 PYXXXXXXXXXXXXXXXXXXXXXGELLPKXXXXXXXXXXXXXLVEIDPLATLPNLKFLSL 781
PY GE LP LVEIDPLA+LP L FLSL
Sbjct: 61 PYLNRLGTMLINNNRITRINPNIGEFLPNLHTLVLTNNRIVNLVEIDPLASLPKLHFLSL 120
Query: 780 LDNNITKKPNYRLYVIHKLKSLRLLDFRKVKQKERQEANNMFASEEAEEEAKIVSVKTFV 601
LDNNITKKPNYRLYVI+ LKSLR+LDF+KVK KER EA N+FAS+E EE + KTF
Sbjct: 121 LDNNITKKPNYRLYVINNLKSLRVLDFKKVKNKERLEAKNLFASKEVIEEIQRTPAKTFS 180
Query: 600 PGEVPTXXXXXXXXXXXXXAGPTPEQIIAIKAAIVNSQTLEEVARLEQALRTGQLPADLN 421
GE P PTPEQIIAIKAAIVNSQTLEEVARLE+AL++GQLPADL
Sbjct: 181 TGETPNVSEAIEEQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKALKSGQLPADLI 240
Query: 420 IGEHDAAATTANAKEDEMVTDEEKETNDGPKDAKPESKNDGPEDMEQE 277
+ + K ++M+ D+ + DG + E +N MEQ+
Sbjct: 241 SLSDNIMLDNVDEKHEDMIHDDRSQA-DGKSNDTQEQRNTDSASMEQD 287
>gb|AFK43933.1| unknown [Lotus japonicus]
Length = 280
Score = 291 bits (744), Expect = 5e-76
Identities = 167/288 (57%), Positives = 185/288 (64%)
Frame = -1
Query: 1140 MVRITADLIGKSPHFFNAIRERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 961
MVR+TADLI KSPHFFNAI+ERELDLRGNKIAVIENLGATEDQFDT+DLSDNEIVKLEN
Sbjct: 1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTLDLSDNEIVKLENI 60
Query: 960 PYXXXXXXXXXXXXXXXXXXXXXGELLPKXXXXXXXXXXXXXLVEIDPLATLPNLKFLSL 781
PY GE LP LVEIDPLA+LP L+FLSL
Sbjct: 61 PYRNRLGTLLINNNRVTRINPNIGEFLPSLHTLVLTNNRIVNLVEIDPLASLPKLQFLSL 120
Query: 780 LDNNITKKPNYRLYVIHKLKSLRLLDFRKVKQKERQEANNMFASEEAEEEAKIVSVKTFV 601
LDNNITKKPNYRLYVI KL SLR+LDF+KVK KER EA N+F SEEA E A+ VKT
Sbjct: 121 LDNNITKKPNYRLYVISKLDSLRVLDFKKVKNKERLEAKNLFGSEEAIENAQKTPVKTIS 180
Query: 600 PGEVPTXXXXXXXXXXXXXAGPTPEQIIAIKAAIVNSQTLEEVARLEQALRTGQLPADLN 421
P E P PTPEQIIAIKAAIVNSQTLEEVARLE+AL++G LP DL
Sbjct: 181 PAETPDVSEATEEQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKALKSGLLPEDLK 240
Query: 420 IGEHDAAATTANAKEDEMVTDEEKETNDGPKDAKPESKNDGPEDMEQE 277
+ N K +++V DE +T E KN MEQ+
Sbjct: 241 SLNGNVTLDNVNEKGEDVVHDESNDTR--------EQKNTDSAAMEQD 280