BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00009293
         (1367 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004245997.1| PREDICTED: DNA-directed RNA polymerase III s...   304   7e-80
ref|XP_006366884.1| PREDICTED: DNA-directed RNA polymerase III s...   298   3e-78
ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III s...   292   3e-76
ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III s...   291   6e-76
emb|CBI33284.3| unnamed protein product [Vitis vinifera]              290   7e-76
ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III s...   290   7e-76
ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Popu...   281   6e-73
ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, p...   278   5e-72
emb|CBI36309.3| unnamed protein product [Vitis vinifera]              277   9e-72
dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas]                          276   1e-71
ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Popu...   276   2e-71
ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III s...   273   1e-70
gb|ESW11339.1| hypothetical protein PHAVU_008G021700g [Phaseolus...   271   5e-70
gb|EMJ10006.1| hypothetical protein PRUPE_ppa024742mg [Prunus pe...   265   4e-68
gb|EOY25790.1| DNA-directed RNA polymerase III subunit rpc6, put...   259   1e-66
ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citr...   255   3e-65
ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III s...   255   3e-65
gb|EXB67305.1| DNA-directed RNA polymerase III subunit RPC6 [Mor...   253   1e-64
ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III s...   252   2e-64
ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III s...   252   2e-64

>ref|XP_004245997.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
           isoform 1 [Solanum lycopersicum]
           gi|460400960|ref|XP_004245998.1| PREDICTED: DNA-directed
           RNA polymerase III subunit rpc6-like isoform 2 [Solanum
           lycopersicum]
          Length = 237

 Score =  304 bits (778), Expect = 7e-80
 Identities = 152/242 (62%), Positives = 186/242 (76%), Gaps = 1/242 (0%)
 Frame = +2

Query: 8   MSHSGEAASLKRKRPGSNPVTQSLPDAERAVLNVITSKENMGIWVRDIKKETNLSDTVVN 187
           MS S EAA+LKRKRP S+  TQ L DAE  VLNV+ SK+N G+WV D+KKE N++  +V+
Sbjct: 1   MSRSSEAAALKRKRPDSS--TQGLVDAELVVLNVVKSKKNQGVWVADVKKEANIAPALVD 58

Query: 188 XXXXXXXXXXXIKEFVNIQNKGRKHYMAMEFEPSKEVTGGAWYVEGNLDKGFINELKELC 367
                      IK+  +IQNK +K+YMA+E+EPS+E+TGGAWY EG LDK FI  L+E C
Sbjct: 59  KCLTSLVKKNLIKKVPSIQNKAKKYYMAVEYEPSEELTGGAWYSEGKLDKEFITVLRETC 118

Query: 368 LRIISLQKVATVETVYDFLEKKKAVKVACTKQQIAEIVNSLVLDNEIIEVKSTGLGEYHS 547
           L++I + KVATVE ++DFL+K+K V+  CT QQ+ EI+NS+VLD+ IIEVKSTGLGEYHS
Sbjct: 119 LKVIGMMKVATVEGIHDFLKKRKVVE-CCTSQQVGEILNSMVLDDSIIEVKSTGLGEYHS 177

Query: 548 IPIGEQCYRIANVAGVDKGPK-IGAMASIPCGMCPRISQCTPDGIISPRTCVYYKKWLDI 724
           IPIG  CYRIA   GV  GPK IG MASIPCG CPRIS CTPDGIISP+TCVY+ KWLDI
Sbjct: 178 IPIGSVCYRIA--VGVTSGPKTIGPMASIPCGACPRISVCTPDGIISPKTCVYFTKWLDI 235

Query: 725 DF 730
           +F
Sbjct: 236 EF 237


>ref|XP_006366884.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
           [Solanum tuberosum]
          Length = 237

 Score =  298 bits (764), Expect = 3e-78
 Identities = 150/242 (61%), Positives = 184/242 (76%), Gaps = 1/242 (0%)
 Frame = +2

Query: 8   MSHSGEAASLKRKRPGSNPVTQSLPDAERAVLNVITSKENMGIWVRDIKKETNLSDTVVN 187
           MS S EAA++KRKR  S+  TQ L DAE  VLNV+ SK+N+G+WV D+KKE N++  +V+
Sbjct: 1   MSRSSEAAAMKRKRLDSS--TQGLVDAEFVVLNVVKSKKNLGVWVADVKKEANIAPALVD 58

Query: 188 XXXXXXXXXXXIKEFVNIQNKGRKHYMAMEFEPSKEVTGGAWYVEGNLDKGFINELKELC 367
                      IK+   IQNK +KHYMA+E+EPS+E+TGGAWY EG LDK FI  L+E C
Sbjct: 59  KCLTSLVKKNLIKKVPTIQNKAKKHYMAVEYEPSEELTGGAWYSEGKLDKEFITVLRETC 118

Query: 368 LRIISLQKVATVETVYDFLEKKKAVKVACTKQQIAEIVNSLVLDNEIIEVKSTGLGEYHS 547
           L++I + KVATVE ++DFL+K+K V+  CT QQ+ EI+NS+VLD+ IIEVKSTGLGEYHS
Sbjct: 119 LKVIGMMKVATVEGIHDFLKKRKVVE-CCTSQQVGEILNSMVLDDAIIEVKSTGLGEYHS 177

Query: 548 IPIGEQCYRIANVAGVDKGPK-IGAMASIPCGMCPRISQCTPDGIISPRTCVYYKKWLDI 724
           IPIG  CYRIA   G   GPK IG MASIPCG CPRIS CTPDGIISP+TCVYY KWL+I
Sbjct: 178 IPIGSACYRIA--VGDTSGPKTIGPMASIPCGACPRISVCTPDGIISPKTCVYYTKWLNI 235

Query: 725 DF 730
           +F
Sbjct: 236 EF 237


>ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  292 bits (747), Expect = 3e-76
 Identities = 146/239 (61%), Positives = 177/239 (74%), Gaps = 1/239 (0%)
 Frame = +2

Query: 8   MSHSGEAASLKRKRPGSNPVTQSLPDAERAVLNVITSKENMGIWVRDIKKETNLSDTVVN 187
           MS S + +SLKRKRP +N  +Q L DAER + ++I SKE+MGIW RD+K+ETNL D VV 
Sbjct: 1   MSRS-QGSSLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 59

Query: 188 XXXXXXXXXXXIKEFVNIQNKGRKHYMAMEFEPSKEVTGGAWYVEGNLDKGFINELKELC 367
                      IKE VNIQ+KGRKHYMA+EFEPSKE+TGGAWYVEGNLD  +I  LKE C
Sbjct: 60  KSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETC 119

Query: 368 LRIISLQKVATVETVYDFLEKKKAVKVACTKQQIAEIVNSLVLDNEIIEVKSTGLGEYHS 547
           +R++S  KVAT E + + + K       C+ QQIAEI+ +LVLDNEI+EV+S+G GE+ S
Sbjct: 120 VRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSS 179

Query: 548 IPIGEQCYRIANVAGV-DKGPKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYKKWLD 721
           IPIG  CYR  N  G+   GP IGAMASIPCG+CPRI+QCTPDGIISP+TC YY KWLD
Sbjct: 180 IPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLD 238


>ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  291 bits (744), Expect = 6e-76
 Identities = 145/239 (60%), Positives = 177/239 (74%), Gaps = 1/239 (0%)
 Frame = +2

Query: 8   MSHSGEAASLKRKRPGSNPVTQSLPDAERAVLNVITSKENMGIWVRDIKKETNLSDTVVN 187
           MS S +  SLKRKRP +N  +Q L DAER + ++I SKE+MGIW RD+K+ETNL D VV 
Sbjct: 1   MSRS-QGLSLKRKRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 59

Query: 188 XXXXXXXXXXXIKEFVNIQNKGRKHYMAMEFEPSKEVTGGAWYVEGNLDKGFINELKELC 367
                      IKE VNIQ+KGRKHYMA+EFEPSKE+TGGAWYVEGNLD  +I  LKE C
Sbjct: 60  KSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETC 119

Query: 368 LRIISLQKVATVETVYDFLEKKKAVKVACTKQQIAEIVNSLVLDNEIIEVKSTGLGEYHS 547
           ++++S  KVAT E + + + K       C+ QQIAEI+ +LVLDNEI+EV+S+G GE+ S
Sbjct: 120 VKVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSS 179

Query: 548 IPIGEQCYRIANVAGV-DKGPKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYKKWLD 721
           IPIG  CYR  N  G+   GPKIGAMASIPCG+CPRI+QCTPDGIISP++C YY KWLD
Sbjct: 180 IPIGAVCYRCTNKGGLGGGGPKIGAMASIPCGVCPRITQCTPDGIISPKSCAYYAKWLD 238


>emb|CBI33284.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score =  290 bits (743), Expect = 7e-76
 Identities = 145/239 (60%), Positives = 177/239 (74%), Gaps = 1/239 (0%)
 Frame = +2

Query: 8   MSHSGEAASLKRKRPGSNPVTQSLPDAERAVLNVITSKENMGIWVRDIKKETNLSDTVVN 187
           MS S + +SLKRKRP +N  +Q L DAER + ++I SKE+MGIW RD+K+ETNL D VV 
Sbjct: 62  MSRS-QGSSLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 120

Query: 188 XXXXXXXXXXXIKEFVNIQNKGRKHYMAMEFEPSKEVTGGAWYVEGNLDKGFINELKELC 367
                      IKE VNIQ+KGRKHYMA+EFEPSKE+TGGAWYVEGNLD  +I  LK+ C
Sbjct: 121 KSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTC 180

Query: 368 LRIISLQKVATVETVYDFLEKKKAVKVACTKQQIAEIVNSLVLDNEIIEVKSTGLGEYHS 547
           +R++S  KVAT E + + + K       C+ QQIAEI+ +LVLDNEI+EV+S+G GE+ S
Sbjct: 181 VRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSS 240

Query: 548 IPIGEQCYRIANVAGV-DKGPKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYKKWLD 721
           IPIG  CYR  N  G+   GP IGAMASIPCG+CPRI+QCTPDGIISP+TC YY KWLD
Sbjct: 241 IPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLD 299


>ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  290 bits (743), Expect = 7e-76
 Identities = 145/239 (60%), Positives = 177/239 (74%), Gaps = 1/239 (0%)
 Frame = +2

Query: 8   MSHSGEAASLKRKRPGSNPVTQSLPDAERAVLNVITSKENMGIWVRDIKKETNLSDTVVN 187
           MS S + +SLKRKRP +N  +Q L DAER + ++I SKE+MGIW RD+K+ETNL D VV 
Sbjct: 1   MSRS-QGSSLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 59

Query: 188 XXXXXXXXXXXIKEFVNIQNKGRKHYMAMEFEPSKEVTGGAWYVEGNLDKGFINELKELC 367
                      IKE VNIQ+KGRKHYMA+EFEPSKE+TGGAWYVEGNLD  +I  LK+ C
Sbjct: 60  KSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTC 119

Query: 368 LRIISLQKVATVETVYDFLEKKKAVKVACTKQQIAEIVNSLVLDNEIIEVKSTGLGEYHS 547
           +R++S  KVAT E + + + K       C+ QQIAEI+ +LVLDNEI+EV+S+G GE+ S
Sbjct: 120 VRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSS 179

Query: 548 IPIGEQCYRIANVAGV-DKGPKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYKKWLD 721
           IPIG  CYR  N  G+   GP IGAMASIPCG+CPRI+QCTPDGIISP+TC YY KWLD
Sbjct: 180 IPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLD 238


>ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Populus trichocarpa]
           gi|222866141|gb|EEF03272.1| hypothetical protein
           POPTR_0018s04220g [Populus trichocarpa]
          Length = 239

 Score =  281 bits (718), Expect = 6e-73
 Identities = 140/238 (58%), Positives = 170/238 (71%)
 Frame = +2

Query: 8   MSHSGEAASLKRKRPGSNPVTQSLPDAERAVLNVITSKENMGIWVRDIKKETNLSDTVVN 187
           MS     +SLKRKRP  N   QSL + ER + +VI SK+++GIW RD+KKE  L D VVN
Sbjct: 1   MSRLQGPSSLKRKRPEVNSPAQSLTEHERLLYDVIRSKQDIGIWTRDMKKEAKLPDNVVN 60

Query: 188 XXXXXXXXXXXIKEFVNIQNKGRKHYMAMEFEPSKEVTGGAWYVEGNLDKGFINELKELC 367
                      IKE VNIQNKGRKH+MA EFEPSKE++GGAWY+EG+LD  FI  LK+LC
Sbjct: 61  KSLKALQVKKLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLKQLC 120

Query: 368 LRIISLQKVATVETVYDFLEKKKAVKVACTKQQIAEIVNSLVLDNEIIEVKSTGLGEYHS 547
            R I  + VAT+E V D +    A  V  TKQQI EI+ +L+LDN I+EVKS G+GE+ S
Sbjct: 121 KRQIERRGVATLEEVTDSINSYPAFNVDVTKQQIEEILRTLILDNVIMEVKSNGMGEFAS 180

Query: 548 IPIGEQCYRIANVAGVDKGPKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYKKWLD 721
           IP GE CY+  +  G+   PK GA+ASIPCG+CPRISQCTPDGIISP+TCVYY+KWLD
Sbjct: 181 IPFGEVCYKYISKVGLGGEPKAGALASIPCGVCPRISQCTPDGIISPKTCVYYQKWLD 238


>ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, putative [Ricinus
           communis] gi|223549406|gb|EEF50894.1| DNA-directed RNA
           polymerase III subunit F, putative [Ricinus communis]
          Length = 236

 Score =  278 bits (710), Expect = 5e-72
 Identities = 138/230 (60%), Positives = 165/230 (71%)
 Frame = +2

Query: 32  SLKRKRPGSNPVTQSLPDAERAVLNVITSKENMGIWVRDIKKETNLSDTVVNXXXXXXXX 211
           +LKRK+P S+   QSL + E  + NVI SK++MGIW RD+K+ETNL D VVN        
Sbjct: 6   ALKRKQPESSSPAQSLTEHECTLYNVIWSKQDMGIWTRDMKRETNLPDNVVNKSLKVLQA 65

Query: 212 XXXIKEFVNIQNKGRKHYMAMEFEPSKEVTGGAWYVEGNLDKGFINELKELCLRIISLQK 391
              IKE VNIQNKGRKHYMA EFEPSKE+TGGAWYVEGNLD  FI  LKE+C + +   K
Sbjct: 66  KNLIKEVVNIQNKGRKHYMATEFEPSKEITGGAWYVEGNLDTEFIKLLKEVCTKQVLKLK 125

Query: 392 VATVETVYDFLEKKKAVKVACTKQQIAEIVNSLVLDNEIIEVKSTGLGEYHSIPIGEQCY 571
           VAT+E + D +++        TKQQI EIV +LVLDN +IEVKS G+ E+  IPIG+ CY
Sbjct: 126 VATLEGITDSIKRSGIFNTELTKQQIEEIVKALVLDNALIEVKSNGMLEFSFIPIGKVCY 185

Query: 572 RIANVAGVDKGPKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYKKWLD 721
           +          P+IGAMASIPCG+CPRISQCTPDGIISP+TCVYY KWLD
Sbjct: 186 KCVGKGSTAGEPRIGAMASIPCGVCPRISQCTPDGIISPQTCVYYSKWLD 235


>emb|CBI36309.3| unnamed protein product [Vitis vinifera]
          Length = 493

 Score =  277 bits (708), Expect = 9e-72
 Identities = 140/234 (59%), Positives = 173/234 (73%), Gaps = 1/234 (0%)
 Frame = +2

Query: 8   MSHSGEAASLKRKRPGSNPVTQSLPDAERAVLNVITSKENMGIWVRDIKKETNLSDTVVN 187
           MS S +  SLKRKRP +N  +Q L DAER + ++I SKE+MGIW RD+K+ETNL D VV 
Sbjct: 91  MSRS-QGLSLKRKRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 149

Query: 188 XXXXXXXXXXXIKEFVNIQNKGRKHYMAMEFEPSKEVTGGAWYVEGNLDKGFINELKELC 367
                      IKE VNIQ+KGRKHYMA+EFEPSKE+TGGAWYVEGNLD  +I  LKE C
Sbjct: 150 KSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETC 209

Query: 368 LRIISLQKVATVETVYDFLEKKKAVKVACTKQQIAEIVNSLVLDNEIIEVKSTGLGEYHS 547
           ++++S  KVAT E + + + K       C+ QQIAEI+ +LVLDNEI+EV+S+G GE+ S
Sbjct: 210 VKVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSS 269

Query: 548 IPIGEQCYRIANVAGV-DKGPKIGAMASIPCGMCPRISQCTPDGIISPRTCVYY 706
           IPIG  CYR  N  G+   GPKIGAMASIPCG+CPRI+QCTPDGIISP++ V+Y
Sbjct: 270 IPIGAVCYRCTNKGGLGGGGPKIGAMASIPCGVCPRITQCTPDGIISPKSSVHY 323


>dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas]
          Length = 235

 Score =  276 bits (706), Expect = 1e-71
 Identities = 138/228 (60%), Positives = 165/228 (72%)
 Frame = +2

Query: 38  KRKRPGSNPVTQSLPDAERAVLNVITSKENMGIWVRDIKKETNLSDTVVNXXXXXXXXXX 217
           KRK+P SN   QSL + E+A+ N I SK++MGIW RD+K+ETNL DTVVN          
Sbjct: 8   KRKQPESNSSAQSLTEHEQALYNAIRSKQDMGIWTRDMKRETNLPDTVVNKSLKVLQAKN 67

Query: 218 XIKEFVNIQNKGRKHYMAMEFEPSKEVTGGAWYVEGNLDKGFINELKELCLRIISLQKVA 397
            IKE VNIQNKGRK+YMA EFEPSKE+TGG WYVEGNLD  FI  LK+ C + I   KVA
Sbjct: 68  LIKEVVNIQNKGRKYYMATEFEPSKEITGGTWYVEGNLDTMFIGVLKDQCKKQIEKLKVA 127

Query: 398 TVETVYDFLEKKKAVKVACTKQQIAEIVNSLVLDNEIIEVKSTGLGEYHSIPIGEQCYRI 577
           TVE V DF+ +     V  TKQQI EI+ +LVLDN++ EVKS G+GE+ SIP+G+ CY+ 
Sbjct: 128 TVEAVTDFINRTGVSTVHLTKQQIEEILKALVLDNKVTEVKSNGMGEFASIPVGKVCYKS 187

Query: 578 ANVAGVDKGPKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYKKWLD 721
               G    PKIGAMASIPCG+CPRI  CTP+GIISP+TCVYY KWL+
Sbjct: 188 IG-KGSSGDPKIGAMASIPCGVCPRIKHCTPNGIISPQTCVYYGKWLE 234


>ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Populus trichocarpa]
           gi|550346475|gb|EEE82426.2| hypothetical protein
           POPTR_0001s04090g [Populus trichocarpa]
          Length = 291

 Score =  276 bits (705), Expect = 2e-71
 Identities = 137/240 (57%), Positives = 169/240 (70%)
 Frame = +2

Query: 2   IRMSHSGEAASLKRKRPGSNPVTQSLPDAERAVLNVITSKENMGIWVRDIKKETNLSDTV 181
           + MS     +SLKRKRP  N   QSL + ER + +VI SK+++GIW RD+KKE  L D V
Sbjct: 51  VGMSRVQGPSSLKRKRPELNSPVQSLTEHERILYDVIRSKQDIGIWTRDMKKEAKLPDNV 110

Query: 182 VNXXXXXXXXXXXIKEFVNIQNKGRKHYMAMEFEPSKEVTGGAWYVEGNLDKGFINELKE 361
           VN           IKE VNIQNKGRKH+MA EFEPSKE++GGAWY+EG+LD  FI  L++
Sbjct: 111 VNKSLKALRVKNLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLRQ 170

Query: 362 LCLRIISLQKVATVETVYDFLEKKKAVKVACTKQQIAEIVNSLVLDNEIIEVKSTGLGEY 541
           LC R I  + VAT+E V D +    A  V  TKQQI EI+ +L+LDN I+EVKS G+GE+
Sbjct: 171 LCKRQIEKKGVATLEEVTDSINSYPAFNVDVTKQQIEEILRTLILDNAIMEVKSNGMGEF 230

Query: 542 HSIPIGEQCYRIANVAGVDKGPKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYKKWLD 721
            SIP G+ CYR  +   +   PK GA+ASIPCG+CPRIS CTPDGIISP+TCVYY+KWLD
Sbjct: 231 ASIPFGKVCYRYISKGALGGEPKAGALASIPCGVCPRISHCTPDGIISPKTCVYYQKWLD 290


>ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           [Glycine max]
          Length = 239

 Score =  273 bits (698), Expect = 1e-70
 Identities = 137/238 (57%), Positives = 168/238 (70%)
 Frame = +2

Query: 8   MSHSGEAASLKRKRPGSNPVTQSLPDAERAVLNVITSKENMGIWVRDIKKETNLSDTVVN 187
           MSH   ++SLKRKR     VT SL D ER + N+I SK++MGIW  D+K+ETNL D++V 
Sbjct: 1   MSHLQGSSSLKRKRQDLALVTGSLTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVK 60

Query: 188 XXXXXXXXXXXIKEFVNIQNKGRKHYMAMEFEPSKEVTGGAWYVEGNLDKGFINELKELC 367
                      IKE VNIQNKGRKHYMA EFEPSKE+TGG WY +G LD  FIN +K++C
Sbjct: 61  KSLKLLQSKNLIKEVVNIQNKGRKHYMAAEFEPSKEITGGVWYNQGRLDTDFINLVKDVC 120

Query: 368 LRIISLQKVATVETVYDFLEKKKAVKVACTKQQIAEIVNSLVLDNEIIEVKSTGLGEYHS 547
           L+ I  QKVAT + V ++  K     V  T QQI EI+ +LVLD+EI+EVKSTG G++ S
Sbjct: 121 LKYIFRQKVATRDGVMEWSRKSGVFNVEVTTQQIDEILRTLVLDDEIVEVKSTGFGDFSS 180

Query: 548 IPIGEQCYRIANVAGVDKGPKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYKKWLD 721
           +P+G  CYR  +  G     K GAMASIPCG+CPRI+ CTPDGIISPRTCVYY+KWLD
Sbjct: 181 VPVGRICYRCKSKGGNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWLD 238


>gb|ESW11339.1| hypothetical protein PHAVU_008G021700g [Phaseolus vulgaris]
          Length = 239

 Score =  271 bits (693), Expect = 5e-70
 Identities = 137/238 (57%), Positives = 169/238 (71%)
 Frame = +2

Query: 8   MSHSGEAASLKRKRPGSNPVTQSLPDAERAVLNVITSKENMGIWVRDIKKETNLSDTVVN 187
           MS   E++SLKRKR     V+ S+ D ER + N+I SK++MGIW  D+K+ETNL D++V 
Sbjct: 1   MSQLQESSSLKRKRQDLALVSGSMTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVK 60

Query: 188 XXXXXXXXXXXIKEFVNIQNKGRKHYMAMEFEPSKEVTGGAWYVEGNLDKGFINELKELC 367
                      IKE VNIQNKGRKHYMA EFEPSKE+TGG WY +G+LD  FIN +KE+C
Sbjct: 61  KSLKLLQSKNLIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYTQGSLDTDFINLVKEVC 120

Query: 368 LRIISLQKVATVETVYDFLEKKKAVKVACTKQQIAEIVNSLVLDNEIIEVKSTGLGEYHS 547
           L+ I  QKVAT + V ++  K     V  T QQI EI+ +LVLD+EI EVKSTGLG++ S
Sbjct: 121 LKCIFRQKVATHDGVLEWSRKSGVFTVEVTAQQIDEILRALVLDDEIEEVKSTGLGDFSS 180

Query: 548 IPIGEQCYRIANVAGVDKGPKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYKKWLD 721
           +P+G  CYR  +  G     K GAMASIPCG+CPRI+ CTPDGIISPRTCVYY+KWLD
Sbjct: 181 VPVGRICYRCKSKGGNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWLD 238


>gb|EMJ10006.1| hypothetical protein PRUPE_ppa024742mg [Prunus persica]
          Length = 236

 Score =  265 bits (676), Expect = 4e-68
 Identities = 129/231 (55%), Positives = 167/231 (72%)
 Frame = +2

Query: 29  ASLKRKRPGSNPVTQSLPDAERAVLNVITSKENMGIWVRDIKKETNLSDTVVNXXXXXXX 208
           ++LKRK+P S+  ++SL + E+ V +VI SK++MGIW RD+KKE NL D +V        
Sbjct: 5   SALKRKQPDSSSPSESLTEHEKIVYSVIRSKQDMGIWTRDMKKEANLPDNLVGKSIKSLQ 64

Query: 209 XXXXIKEFVNIQNKGRKHYMAMEFEPSKEVTGGAWYVEGNLDKGFINELKELCLRIISLQ 388
               IKE VN+Q+KGRKHYMA EFEPSKE+TGG WY  G LDK +I+ +K+   +II   
Sbjct: 65  AKNLIKEVVNVQSKGRKHYMAAEFEPSKELTGGDWYSNGTLDKYYISCVKDGFAKIIYQL 124

Query: 389 KVATVETVYDFLEKKKAVKVACTKQQIAEIVNSLVLDNEIIEVKSTGLGEYHSIPIGEQC 568
           KVAT+E + D ++K    K + TKQQI EI+  LVLD  + EVKSTG+GE+ S P+G+ C
Sbjct: 125 KVATLEGISDEVKKSGIFKTSFTKQQIEEILRVLVLDKRVTEVKSTGMGEFGSFPVGKVC 184

Query: 569 YRIANVAGVDKGPKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYKKWLD 721
           Y+  +  G  + PK+GAMASIPCG+CPRISQCTPDGIISPRTCVY+ KWLD
Sbjct: 185 YKSTSKGGSKREPKVGAMASIPCGVCPRISQCTPDGIISPRTCVYFTKWLD 235


>gb|EOY25790.1| DNA-directed RNA polymerase III subunit rpc6, putative isoform 1
           [Theobroma cacao] gi|508778535|gb|EOY25791.1|
           DNA-directed RNA polymerase III subunit rpc6, putative
           isoform 1 [Theobroma cacao]
          Length = 237

 Score =  259 bits (663), Expect = 1e-66
 Identities = 129/230 (56%), Positives = 165/230 (71%)
 Frame = +2

Query: 32  SLKRKRPGSNPVTQSLPDAERAVLNVITSKENMGIWVRDIKKETNLSDTVVNXXXXXXXX 211
           +LKRKRPG+   + SL + ER V +VI  K++MGI  RD+K+E NL D +V         
Sbjct: 9   ALKRKRPGAT--SDSLTEHERIVHDVIQGKQDMGISQRDMKREINLPDNLVTKCLKSLLA 66

Query: 212 XXXIKEFVNIQNKGRKHYMAMEFEPSKEVTGGAWYVEGNLDKGFINELKELCLRIISLQK 391
              IKE  NIQN+GRKH+++ EFEPS E+TGGAWYVEG+LD  +IN LKE C R I   K
Sbjct: 67  KNLIKEVKNIQNRGRKHFISAEFEPSNEITGGAWYVEGSLDTEYINVLKEQCWRKIYGLK 126

Query: 392 VATVETVYDFLEKKKAVKVACTKQQIAEIVNSLVLDNEIIEVKSTGLGEYHSIPIGEQCY 571
           VAT+E V D +++    ++  +KQQI EIV +LVLDNE++EVKS+G GE+ SIP+G+ CY
Sbjct: 127 VATLEGVTDAIKRSNVSQIELSKQQIEEIVKALVLDNEVMEVKSSGTGEFASIPVGKVCY 186

Query: 572 RIANVAGVDKGPKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYKKWLD 721
           +     G    PK+G MASIPCG+CP+IS CTPDGIISP+TCVYYKKWLD
Sbjct: 187 KCIGKRGYGGEPKVGTMASIPCGVCPQISHCTPDGIISPKTCVYYKKWLD 236


>ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citrus clementina]
           gi|557529238|gb|ESR40488.1| hypothetical protein
           CICLE_v10026399mg [Citrus clementina]
          Length = 233

 Score =  255 bits (652), Expect = 3e-65
 Identities = 126/230 (54%), Positives = 163/230 (70%), Gaps = 2/230 (0%)
 Frame = +2

Query: 38  KRKRPGSNPVTQSLPDAERAVLNVITSKENMGIWVRDIKKE--TNLSDTVVNXXXXXXXX 211
           KRKRP SN  + SL D ER + +VI SK++MGIW RD+K+E   NL D +V         
Sbjct: 3   KRKRPDSNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSLQN 62

Query: 212 XXXIKEFVNIQNKGRKHYMAMEFEPSKEVTGGAWYVEGNLDKGFINELKELCLRIISLQK 391
              IKE VNI +KG+KH MA+EFEPSKE++GGAWY EG+LD  FI  +K  CL+ I   K
Sbjct: 63  KSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLK 122

Query: 392 VATVETVYDFLEKKKAVKVACTKQQIAEIVNSLVLDNEIIEVKSTGLGEYHSIPIGEQCY 571
           VAT+E + D +++  A KV  TKQQI EIV +LVLDN+I+EVKS G GE+ +IP+G+ CY
Sbjct: 123 VATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGKVCY 182

Query: 572 RIANVAGVDKGPKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYKKWLD 721
           +  +  G    PK G++ASIPCG+CP+I+ C PDG+ISP+TCVYY KWLD
Sbjct: 183 KNVSKGGGGGEPKTGSLASIPCGVCPQINICKPDGVISPKTCVYYTKWLD 232


>ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           [Citrus sinensis]
          Length = 233

 Score =  255 bits (651), Expect = 3e-65
 Identities = 126/230 (54%), Positives = 163/230 (70%), Gaps = 2/230 (0%)
 Frame = +2

Query: 38  KRKRPGSNPVTQSLPDAERAVLNVITSKENMGIWVRDIKKE--TNLSDTVVNXXXXXXXX 211
           KRKRP SN  + SL D ER + +VI SK++MGIW RD+K+E   NL D +V         
Sbjct: 3   KRKRPESNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSLQN 62

Query: 212 XXXIKEFVNIQNKGRKHYMAMEFEPSKEVTGGAWYVEGNLDKGFINELKELCLRIISLQK 391
              IKE VNI +KG+KH MA+EFEPSKE++GGAWY EG+LD  FI  +K  CL+ I   K
Sbjct: 63  KSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLK 122

Query: 392 VATVETVYDFLEKKKAVKVACTKQQIAEIVNSLVLDNEIIEVKSTGLGEYHSIPIGEQCY 571
           VAT+E + D +++  A KV  TKQQI EIV +LVLDN+I+EVKS G GE+ +IP+G+ CY
Sbjct: 123 VATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGKVCY 182

Query: 572 RIANVAGVDKGPKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYKKWLD 721
           +  +  G    PK G++ASIPCG+CP+I+ CTPDG+ISP+TCVYY  WLD
Sbjct: 183 KNVSKGGGGGEPKTGSLASIPCGVCPQINICTPDGVISPKTCVYYTTWLD 232


>gb|EXB67305.1| DNA-directed RNA polymerase III subunit RPC6 [Morus notabilis]
          Length = 238

 Score =  253 bits (647), Expect = 1e-64
 Identities = 125/238 (52%), Positives = 162/238 (68%)
 Frame = +2

Query: 8   MSHSGEAASLKRKRPGSNPVTQSLPDAERAVLNVITSKENMGIWVRDIKKETNLSDTVVN 187
           MS   E +SLKRK+P S     SL + ER + NVI SK++MGIW++D+K+   + D V N
Sbjct: 1   MSRLQEPSSLKRKQPDSRSPLDSLTEHERIIYNVIRSKQDMGIWMQDMKRVAKVPDNVAN 60

Query: 188 XXXXXXXXXXXIKEFVNIQNKGRKHYMAMEFEPSKEVTGGAWYVEGNLDKGFINELKELC 367
                      IKE VNIQ +G+KHY+A EFEP+ E+TGGAWY  G +D   IN LK+ C
Sbjct: 61  KALKSLETKKLIKEVVNIQKRGKKHYVAAEFEPATEITGGAWYSNGKMDFVVINILKDQC 120

Query: 368 LRIISLQKVATVETVYDFLEKKKAVKVACTKQQIAEIVNSLVLDNEIIEVKSTGLGEYHS 547
           L+ I  Q+VAT+E + D + K     V  T  QI E+V +LVLDNE++EVKS G+GE+ S
Sbjct: 121 LKWIYKQRVATLEGILDAIRKSGISNVELTTVQIEELVRALVLDNEVVEVKSNGMGEFDS 180

Query: 548 IPIGEQCYRIANVAGVDKGPKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYKKWLD 721
           IP+G+ CY+ +   G    PKIGAM+SIPCG+CPRIS CTPDGIISP+TC YY +WLD
Sbjct: 181 IPVGKVCYK-STSKGSRGDPKIGAMSSIPCGVCPRISDCTPDGIISPKTCKYYSQWLD 237


>ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           isoform X2 [Citrus sinensis]
          Length = 234

 Score =  252 bits (644), Expect = 2e-64
 Identities = 126/231 (54%), Positives = 163/231 (70%), Gaps = 3/231 (1%)
 Frame = +2

Query: 38  KRKRPGSNPVTQSLPDAERAVLNVITS-KENMGIWVRDIKKE--TNLSDTVVNXXXXXXX 208
           KRKRP SN  + SL D ER + +VI S K++MGIW RD+K+E   NL D +V        
Sbjct: 3   KRKRPDSNAPSDSLTDHERLIYDVIRSNKQDMGIWTRDMKRELKVNLPDNIVTKSIKSLQ 62

Query: 209 XXXXIKEFVNIQNKGRKHYMAMEFEPSKEVTGGAWYVEGNLDKGFINELKELCLRIISLQ 388
               IKE VNI NKG+KH MA+EFEPSKE++GGAWY EG+LD  FI  +K  CL+ I   
Sbjct: 63  NKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKL 122

Query: 389 KVATVETVYDFLEKKKAVKVACTKQQIAEIVNSLVLDNEIIEVKSTGLGEYHSIPIGEQC 568
           KVAT+E + D +++  A KV  TKQQI EIV ++VLDN+I+EVKS G GE+ +IP+G+ C
Sbjct: 123 KVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSNGSGEFTNIPVGKVC 182

Query: 569 YRIANVAGVDKGPKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYKKWLD 721
           Y+  +  G    PK G+ AS+PCG+CP+I+ CTPDG+ISP+TCVYY KWLD
Sbjct: 183 YKNVSKGGGGGEPKTGSSASVPCGVCPQINFCTPDGVISPKTCVYYTKWLD 233


>ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           isoform X1 [Citrus sinensis]
          Length = 252

 Score =  252 bits (644), Expect = 2e-64
 Identities = 126/231 (54%), Positives = 163/231 (70%), Gaps = 3/231 (1%)
 Frame = +2

Query: 38  KRKRPGSNPVTQSLPDAERAVLNVITS-KENMGIWVRDIKKE--TNLSDTVVNXXXXXXX 208
           KRKRP SN  + SL D ER + +VI S K++MGIW RD+K+E   NL D +V        
Sbjct: 21  KRKRPDSNAPSDSLTDHERLIYDVIRSNKQDMGIWTRDMKRELKVNLPDNIVTKSIKSLQ 80

Query: 209 XXXXIKEFVNIQNKGRKHYMAMEFEPSKEVTGGAWYVEGNLDKGFINELKELCLRIISLQ 388
               IKE VNI NKG+KH MA+EFEPSKE++GGAWY EG+LD  FI  +K  CL+ I   
Sbjct: 81  NKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKL 140

Query: 389 KVATVETVYDFLEKKKAVKVACTKQQIAEIVNSLVLDNEIIEVKSTGLGEYHSIPIGEQC 568
           KVAT+E + D +++  A KV  TKQQI EIV ++VLDN+I+EVKS G GE+ +IP+G+ C
Sbjct: 141 KVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSNGSGEFTNIPVGKVC 200

Query: 569 YRIANVAGVDKGPKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYKKWLD 721
           Y+  +  G    PK G+ AS+PCG+CP+I+ CTPDG+ISP+TCVYY KWLD
Sbjct: 201 YKNVSKGGGGGEPKTGSSASVPCGVCPQINFCTPDGVISPKTCVYYTKWLD 251