BLASTX nr result
ID: Catharanthus22_contig00009198
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00009198
(330 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 110 3e-26
gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|3860380... 110 3e-26
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi... 108 2e-25
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera] 108 1e-24
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 108 1e-24
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab... 105 1e-24
emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera] 106 4e-24
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 104 2e-23
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera] 104 2e-23
emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera] 104 2e-23
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 102 5e-23
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi... 102 5e-23
emb|CAN83978.1| hypothetical protein VITISV_007067 [Vitis vinifera] 98 5e-23
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera] 101 1e-22
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t... 99 2e-22
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi... 99 2e-21
emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera] 106 3e-21
emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera] 92 1e-18
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 97 2e-18
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 97 2e-18
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 110 bits (276), Expect(2) = 3e-26
Identities = 50/90 (55%), Positives = 67/90 (74%)
Frame = +2
Query: 2 PGFRTTHPWQVCRLRKPSYGIR*APRCWFSKLTTALRKIGFVQSYADYFIFTYHVGDIFL 181
PGF+ + P +VCRLRK YG++ APRCWFSKL+TALR IGF QSY DY +F+ GD +
Sbjct: 1115 PGFKCSDPSKVCRLRKSLYGLKQAPRCWFSKLSTALRNIGFTQSYEDYSLFSLKNGDTII 1174
Query: 182 CVLIYVDNLLITGNFLAAVNKFKTSLSSTF 271
VL+YVD+L++ GN L A+++FK+ L F
Sbjct: 1175 HVLVYVDDLIVAGNNLDAIDRFKSQLHKCF 1204
Score = 33.1 bits (74), Expect(2) = 3e-26
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +1
Query: 268 FHLKDLGTLKYFLGIVVVATP 330
FH+KDLG LKYFLG+ V P
Sbjct: 1204 FHMKDLGKLKYFLGLEVSRGP 1224
>gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|38603804|gb|AAR24647.1|
At2g23330 [Arabidopsis thaliana]
gi|110742535|dbj|BAE99183.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 776
Score = 110 bits (276), Expect(2) = 3e-26
Identities = 50/90 (55%), Positives = 67/90 (74%)
Frame = +2
Query: 2 PGFRTTHPWQVCRLRKPSYGIR*APRCWFSKLTTALRKIGFVQSYADYFIFTYHVGDIFL 181
PGF+ + P +VCRLRK YG++ APRCWFSKL+TALR IGF QSY DY +F+ GD +
Sbjct: 395 PGFKCSDPSKVCRLRKSLYGLKQAPRCWFSKLSTALRNIGFTQSYEDYSLFSLKNGDTII 454
Query: 182 CVLIYVDNLLITGNFLAAVNKFKTSLSSTF 271
VL+YVD+L++ GN L A+++FK+ L F
Sbjct: 455 HVLVYVDDLIVAGNNLDAIDRFKSQLHKCF 484
Score = 33.1 bits (74), Expect(2) = 3e-26
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +1
Query: 268 FHLKDLGTLKYFLGIVVVATP 330
FH+KDLG LKYFLG+ V P
Sbjct: 484 FHMKDLGKLKYFLGLEVSRGP 504
>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 108 bits (269), Expect(2) = 2e-25
Identities = 51/90 (56%), Positives = 65/90 (72%)
Frame = +2
Query: 2 PGFRTTHPWQVCRLRKPSYGIR*APRCWFSKLTTALRKIGFVQSYADYFIFTYHVGDIFL 181
PGF +HP +VCRLRK YG++ APRCWF KLTTAL++ GF QS ADY +FT G + +
Sbjct: 952 PGFEASHPNKVCRLRKALYGLKQAPRCWFEKLTTALKRYGFQQSLADYSLFTLVKGSVRI 1011
Query: 182 CVLIYVDNLLITGNFLAAVNKFKTSLSSTF 271
+LIYVD+L+ITGN A +FK L+S F
Sbjct: 1012 KILIYVDDLIITGNSQRATQQFKEYLASCF 1041
Score = 33.1 bits (74), Expect(2) = 2e-25
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 268 FHLKDLGTLKYFLGIVV 318
FH+KDLG LKYFLGI V
Sbjct: 1041 FHMKDLGPLKYFLGIEV 1057
>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
Length = 1178
Score = 108 bits (270), Expect(2) = 1e-24
Identities = 51/90 (56%), Positives = 66/90 (73%)
Frame = +2
Query: 2 PGFRTTHPWQVCRLRKPSYGIR*APRCWFSKLTTALRKIGFVQSYADYFIFTYHVGDIFL 181
PGF + P VCRLRK YG++ APRCWFSKL TAL+ GF+QSY+DY +FTY G++ +
Sbjct: 797 PGFERSDPNLVCRLRKSLYGLKQAPRCWFSKLVTALKGYGFLQSYSDYSLFTYTTGNVQI 856
Query: 182 CVLIYVDNLLITGNFLAAVNKFKTSLSSTF 271
VL+YVD+L+I+GN AA+ FK LS F
Sbjct: 857 NVLVYVDDLIISGNDSAALKTFKAYLSDCF 886
Score = 30.4 bits (67), Expect(2) = 1e-24
Identities = 16/25 (64%), Positives = 17/25 (68%), Gaps = 4/25 (16%)
Frame = +1
Query: 256 FKFY----FHLKDLGTLKYFLGIVV 318
FK Y F +KDLG LKYFLGI V
Sbjct: 878 FKAYLSDCFKMKDLGVLKYFLGIEV 902
>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
Length = 1099
Score = 108 bits (270), Expect(2) = 1e-24
Identities = 51/90 (56%), Positives = 66/90 (73%)
Frame = +2
Query: 2 PGFRTTHPWQVCRLRKPSYGIR*APRCWFSKLTTALRKIGFVQSYADYFIFTYHVGDIFL 181
PGF + P VCRLRK YG++ APRCWFSKL TAL+ GF+QSY+DY +FTY G++ +
Sbjct: 718 PGFERSDPNLVCRLRKSLYGLKQAPRCWFSKLVTALKGYGFLQSYSDYSLFTYTTGNVQI 777
Query: 182 CVLIYVDNLLITGNFLAAVNKFKTSLSSTF 271
VL+YVD+L+I+GN AA+ FK LS F
Sbjct: 778 NVLVYVDDLIISGNDSAALKTFKAYLSDCF 807
Score = 30.4 bits (67), Expect(2) = 1e-24
Identities = 16/25 (64%), Positives = 17/25 (68%), Gaps = 4/25 (16%)
Frame = +1
Query: 256 FKFY----FHLKDLGTLKYFLGIVV 318
FK Y F +KDLG LKYFLGI V
Sbjct: 799 FKAYLSDCFKMKDLGVLKYFLGIEV 823
>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1486
Score = 105 bits (262), Expect(2) = 1e-24
Identities = 48/90 (53%), Positives = 65/90 (72%)
Frame = +2
Query: 2 PGFRTTHPWQVCRLRKPSYGIR*APRCWFSKLTTALRKIGFVQSYADYFIFTYHVGDIFL 181
PGFRT +VCRLRK YG++ APRCWF+KLT+AL+ GF+Q +DY +F +H + L
Sbjct: 1105 PGFRTGDKTKVCRLRKSLYGLKQAPRCWFAKLTSALKNYGFIQDISDYSLFIFHKNGVRL 1164
Query: 182 CVLIYVDNLLITGNFLAAVNKFKTSLSSTF 271
VL+YVD+L+ITG +A + +FK LSS F
Sbjct: 1165 HVLVYVDDLIITGTTIAVITEFKHYLSSCF 1194
Score = 33.1 bits (74), Expect(2) = 1e-24
Identities = 16/29 (55%), Positives = 20/29 (68%), Gaps = 4/29 (13%)
Frame = +1
Query: 256 FKFY----FHLKDLGTLKYFLGIVVVATP 330
FK Y F++KDLG L+YFLGI V +P
Sbjct: 1186 FKHYLSSCFYMKDLGILRYFLGIEVARSP 1214
>emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]
Length = 1461
Score = 106 bits (265), Expect(2) = 4e-24
Identities = 50/90 (55%), Positives = 66/90 (73%)
Frame = +2
Query: 2 PGFRTTHPWQVCRLRKPSYGIR*APRCWFSKLTTALRKIGFVQSYADYFIFTYHVGDIFL 181
PGF + P VCRLRK YG++ APRCWF+KL TAL+ GF+QSY+DY +FTY G++ +
Sbjct: 1080 PGFERSDPNLVCRLRKSLYGLKQAPRCWFAKLVTALKGYGFLQSYSDYSLFTYTKGNVQI 1139
Query: 182 CVLIYVDNLLITGNFLAAVNKFKTSLSSTF 271
VL+YVD+L+I+GN AA+ FK LS F
Sbjct: 1140 NVLVYVDDLIISGNDSAALKTFKAYLSDCF 1169
Score = 30.4 bits (67), Expect(2) = 4e-24
Identities = 16/25 (64%), Positives = 17/25 (68%), Gaps = 4/25 (16%)
Frame = +1
Query: 256 FKFY----FHLKDLGTLKYFLGIVV 318
FK Y F +KDLG LKYFLGI V
Sbjct: 1161 FKAYLSDCFKMKDLGVLKYFLGIEV 1185
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 104 bits (259), Expect(2) = 2e-23
Identities = 52/91 (57%), Positives = 65/91 (71%)
Frame = +2
Query: 2 PGFRTTHPWQVCRLRKPSYGIR*APRCWFSKLTTALRKIGFVQSYADYFIFTYHVGDIFL 181
PGFR +HP +VCRLRK YG++ APRCWF KL+ +L + GFVQSY DY +F+Y +I L
Sbjct: 1120 PGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDSLLRFGFVQSYEDYSLFSYTRNNIEL 1179
Query: 182 CVLIYVDNLLITGNFLAAVNKFKTSLSSTFT 274
VLIYVD+LLI GN + KFK LS F+
Sbjct: 1180 RVLIYVDDLLICGNDGYMLQKFKDYLSRCFS 1210
Score = 30.4 bits (67), Expect(2) = 2e-23
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +1
Query: 268 FHLKDLGTLKYFLGIVVVATP 330
F +KDLG LKYFLGI V P
Sbjct: 1209 FSMKDLGKLKYFLGIEVSRGP 1229
>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
Length = 1129
Score = 104 bits (259), Expect(2) = 2e-23
Identities = 49/90 (54%), Positives = 66/90 (73%)
Frame = +2
Query: 2 PGFRTTHPWQVCRLRKPSYGIR*APRCWFSKLTTALRKIGFVQSYADYFIFTYHVGDIFL 181
PGF ++ P VCRL K YG++ APRCWF+KL TAL+ GF+QSY+DY +FTY G++ +
Sbjct: 748 PGFESSDPNLVCRLWKSLYGLKQAPRCWFAKLVTALKGYGFLQSYSDYSLFTYTKGNVQI 807
Query: 182 CVLIYVDNLLITGNFLAAVNKFKTSLSSTF 271
VL+YVD+L+I+GN AA+ FK LS F
Sbjct: 808 NVLVYVDDLIISGNDSAALKTFKAYLSDCF 837
Score = 30.4 bits (67), Expect(2) = 2e-23
Identities = 16/25 (64%), Positives = 17/25 (68%), Gaps = 4/25 (16%)
Frame = +1
Query: 256 FKFY----FHLKDLGTLKYFLGIVV 318
FK Y F +KDLG LKYFLGI V
Sbjct: 829 FKAYLSDCFKMKDLGVLKYFLGIEV 853
>emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]
Length = 1196
Score = 104 bits (260), Expect(2) = 2e-23
Identities = 49/90 (54%), Positives = 65/90 (72%)
Frame = +2
Query: 2 PGFRTTHPWQVCRLRKPSYGIR*APRCWFSKLTTALRKIGFVQSYADYFIFTYHVGDIFL 181
PGF + P VCRLRK YG++ APRCWF+KL T L+ GF+QSY+DY +FTY G++ +
Sbjct: 924 PGFESXDPNLVCRLRKSLYGLKQAPRCWFAKLVTXLKGYGFLQSYSDYSLFTYTKGNVQI 983
Query: 182 CVLIYVDNLLITGNFLAAVNKFKTSLSSTF 271
VL+YVD+L+I+GN AA+ FK LS F
Sbjct: 984 NVLVYVDDLIISGNDSAALKTFKAYLSDCF 1013
Score = 29.6 bits (65), Expect(2) = 2e-23
Identities = 15/25 (60%), Positives = 17/25 (68%), Gaps = 4/25 (16%)
Frame = +1
Query: 256 FKFY----FHLKDLGTLKYFLGIVV 318
FK Y F +K+LG LKYFLGI V
Sbjct: 1005 FKAYLSDCFKMKBLGVLKYFLGIEV 1029
>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 102 bits (255), Expect(2) = 5e-23
Identities = 49/91 (53%), Positives = 62/91 (68%)
Frame = +2
Query: 2 PGFRTTHPWQVCRLRKPSYGIR*APRCWFSKLTTALRKIGFVQSYADYFIFTYHVGDIFL 181
PGFR +HP +VCRLRK YG++ APRCWF KL+ AL++ GF+Q Y DY F+Y I L
Sbjct: 1110 PGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDALKRFGFIQGYEDYSFFSYSCKGIEL 1169
Query: 182 CVLIYVDNLLITGNFLAAVNKFKTSLSSTFT 274
VL+YVD+L+I GN V KFK L F+
Sbjct: 1170 RVLVYVDDLIICGNDEYMVQKFKEYLGRCFS 1200
Score = 30.4 bits (67), Expect(2) = 5e-23
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +1
Query: 268 FHLKDLGTLKYFLGIVVVATP 330
F +KDLG LKYFLGI V P
Sbjct: 1199 FSMKDLGKLKYFLGIEVSRGP 1219
>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 102 bits (255), Expect(2) = 5e-23
Identities = 49/91 (53%), Positives = 62/91 (68%)
Frame = +2
Query: 2 PGFRTTHPWQVCRLRKPSYGIR*APRCWFSKLTTALRKIGFVQSYADYFIFTYHVGDIFL 181
PGFR +HP +VCRLRK YG++ APRCWF KL+ AL++ GF+Q Y DY F+Y I L
Sbjct: 1110 PGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDALKRFGFIQGYEDYSFFSYSCKGIEL 1169
Query: 182 CVLIYVDNLLITGNFLAAVNKFKTSLSSTFT 274
VL+YVD+L+I GN V KFK L F+
Sbjct: 1170 RVLVYVDDLIICGNDEYMVQKFKEYLGRCFS 1200
Score = 30.4 bits (67), Expect(2) = 5e-23
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +1
Query: 268 FHLKDLGTLKYFLGIVVVATP 330
F +KDLG LKYFLGI V P
Sbjct: 1199 FSMKDLGKLKYFLGIEVSRGP 1219
>emb|CAN83978.1| hypothetical protein VITISV_007067 [Vitis vinifera]
Length = 514
Score = 97.8 bits (242), Expect(2) = 5e-23
Identities = 48/90 (53%), Positives = 60/90 (66%)
Frame = +2
Query: 2 PGFRTTHPWQVCRLRKPSYGIR*APRCWFSKLTTALRKIGFVQSYADYFIFTYHVGDIFL 181
PGF + P +VCRLR YG+R APRCWF+KL AL GF QSY+DY +FTY I L
Sbjct: 151 PGFMSLTPGKVCRLRNTLYGLRQAPRCWFAKLAAALXGYGFKQSYSDYLLFTYEAQHIQL 210
Query: 182 CVLIYVDNLLITGNFLAAVNKFKTSLSSTF 271
VL+YVD+++I+GN V +FK LS F
Sbjct: 211 NVLVYVDDIIISGNDGTDVXQFKDYLSRCF 240
Score = 35.4 bits (80), Expect(2) = 5e-23
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +1
Query: 268 FHLKDLGTLKYFLGIVVVATP 330
FH+KDLG LKYFLGI V P
Sbjct: 240 FHMKDLGKLKYFLGIEVARNP 260
>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
Length = 1450
Score = 101 bits (251), Expect(2) = 1e-22
Identities = 47/90 (52%), Positives = 66/90 (73%)
Frame = +2
Query: 2 PGFRTTHPWQVCRLRKPSYGIR*APRCWFSKLTTALRKIGFVQSYADYFIFTYHVGDIFL 181
PGF ++ P VCRLRK YG++ APRCWF+KL TAL+ GF+QSY++Y +FTY G++ +
Sbjct: 1080 PGFESSDPNLVCRLRKSLYGLKQAPRCWFAKLVTALKGYGFLQSYSNYSLFTYTKGNVQI 1139
Query: 182 CVLIYVDNLLITGNFLAAVNKFKTSLSSTF 271
VL+YVD+L+I+ N AA+ FK L+ F
Sbjct: 1140 NVLVYVDDLIISRNDSAALKTFKAYLNDCF 1169
Score = 30.4 bits (67), Expect(2) = 1e-22
Identities = 16/25 (64%), Positives = 17/25 (68%), Gaps = 4/25 (16%)
Frame = +1
Query: 256 FKFY----FHLKDLGTLKYFLGIVV 318
FK Y F +KDLG LKYFLGI V
Sbjct: 1161 FKAYLNDCFKMKDLGVLKYFLGIEV 1185
>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1462
Score = 99.0 bits (245), Expect(2) = 2e-22
Identities = 48/90 (53%), Positives = 62/90 (68%)
Frame = +2
Query: 2 PGFRTTHPWQVCRLRKPSYGIR*APRCWFSKLTTALRKIGFVQSYADYFIFTYHVGDIFL 181
PGF + +VCRLRK YG++ APRCWF+KLTTAL GF+Q +DY +FT I L
Sbjct: 1067 PGFGSDDNRKVCRLRKALYGLKQAPRCWFAKLTTALNDYGFIQDISDYSLFTMERNGIRL 1126
Query: 182 CVLIYVDNLLITGNFLAAVNKFKTSLSSTF 271
+L+YVD+L+ITG+ L + KFK LSS F
Sbjct: 1127 HILVYVDDLIITGSSLDVITKFKGYLSSCF 1156
Score = 32.3 bits (72), Expect(2) = 2e-22
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1
Query: 268 FHLKDLGTLKYFLGIVVVATP 330
F++KDLG L+YFLGI V +P
Sbjct: 1156 FYMKDLGILRYFLGIEVARSP 1176
>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1156
Score = 98.6 bits (244), Expect(2) = 2e-21
Identities = 49/91 (53%), Positives = 61/91 (67%)
Frame = +2
Query: 2 PGFRTTHPWQVCRLRKPSYGIR*APRCWFSKLTTALRKIGFVQSYADYFIFTYHVGDIFL 181
PGFR +HP +VCRLRK YG++ APRCWF KL+ AL + GFVQ + DY F+Y I L
Sbjct: 767 PGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDALLRFGFVQGHEDYSFFSYTRNGIEL 826
Query: 182 CVLIYVDNLLITGNFLAAVNKFKTSLSSTFT 274
VL+YVD+LLI GN + KFK L F+
Sbjct: 827 RVLVYVDDLLICGNDGYMLQKFKEYLGRCFS 857
Score = 29.6 bits (65), Expect(2) = 2e-21
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +1
Query: 268 FHLKDLGTLKYFLGIVV 318
F +KDLG LKYFLGI V
Sbjct: 856 FSMKDLGKLKYFLGIEV 872
>emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]
Length = 1191
Score = 106 bits (265), Expect = 3e-21
Identities = 49/90 (54%), Positives = 67/90 (74%)
Frame = +2
Query: 2 PGFRTTHPWQVCRLRKPSYGIR*APRCWFSKLTTALRKIGFVQSYADYFIFTYHVGDIFL 181
PGF ++ P VCRLRK YG++ APRCWF+KL TAL+ GF+QSY+DY +FTY G++ +
Sbjct: 792 PGFESSDPNLVCRLRKSLYGLKQAPRCWFAKLVTALKGYGFLQSYSDYSLFTYTKGNVQI 851
Query: 182 CVLIYVDNLLITGNFLAAVNKFKTSLSSTF 271
VL+YVD+L+I+G+ AA+ FK LS F
Sbjct: 852 NVLVYVDDLIISGBDSAALKTFKAYLSDCF 881
>emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]
Length = 1157
Score = 92.4 bits (228), Expect(2) = 1e-18
Identities = 46/90 (51%), Positives = 58/90 (64%)
Frame = +2
Query: 2 PGFRTTHPWQVCRLRKPSYGIR*APRCWFSKLTTALRKIGFVQSYADYFIFTYHVGDIFL 181
PGF + P +VC LRK YG++ AP+CWF+KL AL GF QSY DY +FTY I L
Sbjct: 821 PGFASPTPGKVCGLRKSLYGLQQAPKCWFAKLVAALTSYGFKQSYLDYSLFTYEAQHIQL 880
Query: 182 CVLIYVDNLLITGNFLAAVNKFKTSLSSTF 271
VL+YVD+L+I+ N V +FK LS F
Sbjct: 881 NVLVYVDDLIISRNDGTTVQQFKDYLSRCF 910
Score = 25.8 bits (55), Expect(2) = 1e-18
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +1
Query: 268 FHLKDLGTLKYFLGIVV 318
FH+KDLG LK FLGI V
Sbjct: 910 FHIKDLGKLK-FLGIEV 925
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 97.4 bits (241), Expect = 2e-18
Identities = 46/89 (51%), Positives = 66/89 (74%)
Frame = +2
Query: 5 GFRTTHPWQVCRLRKPSYGIR*APRCWFSKLTTALRKIGFVQSYADYFIFTYHVGDIFLC 184
GF+ P +VCRL K YG++ APRCWFSKL++AL++ GF QS +DY +F+Y+ IF+
Sbjct: 1088 GFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSLSDYSLFSYNNDGIFVH 1147
Query: 185 VLIYVDNLLITGNFLAAVNKFKTSLSSTF 271
VL+YVD+L+I+G+ AV +FK+ L S F
Sbjct: 1148 VLVYVDDLIISGSCPDAVAQFKSYLESCF 1176
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 97.1 bits (240), Expect = 2e-18
Identities = 45/89 (50%), Positives = 66/89 (74%)
Frame = +2
Query: 5 GFRTTHPWQVCRLRKPSYGIR*APRCWFSKLTTALRKIGFVQSYADYFIFTYHVGDIFLC 184
GF+ P +VCRL K YG++ APRCWFSKL++AL++ GF QS +DY +F+Y+ +F+
Sbjct: 729 GFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSLSDYSLFSYNNDGVFVH 788
Query: 185 VLIYVDNLLITGNFLAAVNKFKTSLSSTF 271
VL+YVD+L+I+G+ AV +FK+ L S F
Sbjct: 789 VLVYVDDLIISGSCPDAVAQFKSYLESCF 817