BLASTX nr result
ID: Catharanthus22_contig00009197
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00009197
(327 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003602418.1| Stomatin-like protein [Medicago truncatula] ... 59 3e-12
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 74 2e-11
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 72 6e-11
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 72 6e-11
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 53 7e-10
gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|3860380... 53 7e-10
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 69 9e-10
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi... 68 1e-09
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera] 50 1e-09
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera] 68 1e-09
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera] 68 1e-09
emb|CAN76913.1| hypothetical protein VITISV_037050 [Vitis vinifera] 68 1e-09
emb|CAN60609.1| hypothetical protein VITISV_036599 [Vitis vinifera] 45 2e-09
emb|CAN75744.1| hypothetical protein VITISV_040125 [Vitis vinifera] 45 2e-09
emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera] 67 2e-09
emb|CAN64462.1| hypothetical protein VITISV_008322 [Vitis vinifera] 45 3e-09
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera] 65 7e-09
emb|CAN69815.1| hypothetical protein VITISV_010421 [Vitis vinifera] 44 2e-08
gb|EOY10542.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) ... 49 3e-08
emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera] 62 6e-08
>ref|XP_003602418.1| Stomatin-like protein [Medicago truncatula]
gi|355491466|gb|AES72669.1| Stomatin-like protein
[Medicago truncatula]
Length = 605
Score = 58.5 bits (140), Expect(2) = 3e-12
Identities = 28/40 (70%), Positives = 32/40 (80%)
Frame = -1
Query: 132 LAYSVHSLAQFMQSPRTNYW*AALRVV*YLKKRPGQGILL 13
L+YSVH L+QFMQ PR ++W AALRVV YLK PGQGI L
Sbjct: 401 LSYSVHILSQFMQQPREDHWTAALRVVRYLKGNPGQGIFL 440
Score = 38.5 bits (88), Expect(2) = 3e-12
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = -3
Query: 250 TPMEPNQRLVKSTSAFFAMPNRYRRLIGKLRHLTLTRLE 134
TP+E N L + F P RYRRL+G+L +L TR E
Sbjct: 362 TPLEQNHNLSLAQGEFLENPERYRRLVGRLIYLCFTRPE 400
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 73.9 bits (180), Expect = 2e-11
Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 4/109 (3%)
Frame = -1
Query: 327 RNSTRIYLRQQKYAFEVISEARLTDPRQWS-PIKGW*SPRVLSSPCPIDIVA*SGS*GIL 151
RN+ YL Q+KY ++ISE L R + P++ + +SP D G L
Sbjct: 1194 RNAQGFYLSQRKYVLDIISEMGLLGARPSAFPLEQNHKLSLSTSPLLSDSSRYRRLVGRL 1253
Query: 150 LLHVLS---LAYSVHSLAQFMQSPRTNYW*AALRVV*YLKKRPGQGILL 13
+ V++ L+YSVH+LAQFMQ+PR ++W AA+RVV YLK PGQGILL
Sbjct: 1254 IYLVVTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILL 1302
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 72.4 bits (176), Expect = 6e-11
Identities = 47/109 (43%), Positives = 65/109 (59%), Gaps = 4/109 (3%)
Frame = -1
Query: 327 RNSTRIYLRQQKYAFEVISEARLTDPRQWS-PIKGW*SPRVLSSPCPIDIVA*SGS*GIL 151
RN+ YL Q+KY ++ISE L R + P++ + +SP D G L
Sbjct: 835 RNAQGFYLSQRKYVLDIISEMGLLGARPSAFPLEQNHKLSLSTSPLLSDSSRYRRLVGRL 894
Query: 150 LLHVLS---LAYSVHSLAQFMQSPRTNYW*AALRVV*YLKKRPGQGILL 13
+ ++ L+YSVH+LAQFMQ+PR ++W AA+RVV YLK PGQGILL
Sbjct: 895 IYLAVTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILL 943
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 72.4 bits (176), Expect = 6e-11
Identities = 47/109 (43%), Positives = 65/109 (59%), Gaps = 4/109 (3%)
Frame = -1
Query: 327 RNSTRIYLRQQKYAFEVISEARLTDPRQWS-PIKGW*SPRVLSSPCPIDIVA*SGS*GIL 151
RN+ YL Q+KY ++ISE L R + P++ + +SP D G L
Sbjct: 835 RNAQGFYLSQRKYVLDIISEMGLLGARPSAFPLEQNHKLSLSTSPLLSDSSRYRRLVGRL 894
Query: 150 LLHVLS---LAYSVHSLAQFMQSPRTNYW*AALRVV*YLKKRPGQGILL 13
+ ++ L+YSVH+LAQFMQ+PR ++W AA+RVV YLK PGQGILL
Sbjct: 895 IYLAVTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILL 943
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 52.8 bits (125), Expect(2) = 7e-10
Identities = 26/44 (59%), Positives = 32/44 (72%)
Frame = -1
Query: 132 LAYSVHSLAQFMQSPRTNYW*AALRVV*YLKKRPGQGILLLFDS 1
L+Y+VH L+QFMQ+P +W AALR+V YLK P QGI L DS
Sbjct: 1291 LSYAVHILSQFMQAPLVAHWEAALRLVRYLKGSPAQGIFLRSDS 1334
Score = 36.2 bits (82), Expect(2) = 7e-10
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = -3
Query: 253 STPMEPNQRLVKSTSAFFAMPNRYRRLIGKLRHLTLTR 140
+ P+ N +L T F P +YRRL+G+ +LT+TR
Sbjct: 1251 AVPIALNHKLASITGPVFTNPEQYRRLVGRFIYLTITR 1288
>gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|38603804|gb|AAR24647.1|
At2g23330 [Arabidopsis thaliana]
gi|110742535|dbj|BAE99183.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 776
Score = 52.8 bits (125), Expect(2) = 7e-10
Identities = 26/44 (59%), Positives = 32/44 (72%)
Frame = -1
Query: 132 LAYSVHSLAQFMQSPRTNYW*AALRVV*YLKKRPGQGILLLFDS 1
L+Y+VH L+QFMQ+P +W AALR+V YLK P QGI L DS
Sbjct: 571 LSYAVHILSQFMQAPLVAHWEAALRLVRYLKGSPAQGIFLRSDS 614
Score = 36.2 bits (82), Expect(2) = 7e-10
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = -3
Query: 253 STPMEPNQRLVKSTSAFFAMPNRYRRLIGKLRHLTLTR 140
+ P+ N +L T F P +YRRL+G+ +LT+TR
Sbjct: 531 AVPIALNHKLASITGPVFTNPEQYRRLVGRFIYLTITR 568
>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
Length = 1099
Score = 68.6 bits (166), Expect = 9e-10
Identities = 49/115 (42%), Positives = 65/115 (56%), Gaps = 6/115 (5%)
Frame = -1
Query: 327 RNSTRIYLRQQKYAFEVISEARLTDPRQWS-PIK-----GW*SPRVLSSPCPIDIVA*SG 166
R+S ++L Q+KY +++SEA L + PI+ G + +LS+P + G
Sbjct: 825 RSSAGLFLCQRKYTLDIVSEAGLLGAKPCGFPIEQNHRLGLANGELLSNPESYRRLV--G 882
Query: 165 S*GILLLHVLSLAYSVHSLAQFMQSPRTNYW*AALRVV*YLKKRPGQGILLLFDS 1
L + LAYSVH L+QFM PR +W AALRVV YLK PGQGILL DS
Sbjct: 883 RLIYLAVTRPDLAYSVHILSQFMHEPRIEHWEAALRVVRYLKGTPGQGILLRADS 937
>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 68.2 bits (165), Expect = 1e-09
Identities = 46/111 (41%), Positives = 64/111 (57%), Gaps = 6/111 (5%)
Frame = -1
Query: 327 RNSTRIYLRQQKYAFEVISEARLTD------PRQWSPIKGW*SPRVLSSPCPIDIVA*SG 166
R++T IY+ Q+KYA ++ISE L P + + G + +L+ P + G
Sbjct: 1059 RSTTGIYICQRKYALDIISETGLLGVKPANFPLEQNHKLGLSTSPLLTDPQRYRRLV--G 1116
Query: 165 S*GILLLHVLSLAYSVHSLAQFMQSPRTNYW*AALRVV*YLKKRPGQGILL 13
L + L LA+SVH LA+FMQ PR ++W AALRVV YLK PGQG+ L
Sbjct: 1117 RLIYLAVTRLDLAFSVHILARFMQEPREDHWAAALRVVRYLKADPGQGVFL 1167
>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
Length = 1813
Score = 49.7 bits (117), Expect(2) = 1e-09
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = -1
Query: 132 LAYSVHSLAQFMQSPRTNYW*AALRVV*YLKKRPGQGILL 13
+ YSV +L+QFM +PR +W AALRV+ Y+K PGQG+ L
Sbjct: 1524 IVYSVRTLSQFMNTPRKPHWEAALRVLRYIKGSPGQGLFL 1563
Score = 38.1 bits (87), Expect(2) = 1e-09
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -3
Query: 247 PMEPNQRLVKSTSAFFAMPNRYRRLIGKLRHLTLTR 140
PME N +L P+RYRRL+G+L +LT+TR
Sbjct: 1486 PMEQNLKLTNEDGELLHDPSRYRRLVGRLIYLTVTR 1521
>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
Length = 1450
Score = 67.8 bits (164), Expect = 1e-09
Identities = 47/115 (40%), Positives = 65/115 (56%), Gaps = 6/115 (5%)
Frame = -1
Query: 327 RNSTRIYLRQQKYAFEVISEARLTDPRQWS-PIK-----GW*SPRVLSSPCPIDIVA*SG 166
R+S ++L Q+KY +++SE L + PI+ G + +LS+P + G
Sbjct: 1187 RSSAGLFLCQRKYTLDIVSETGLLGAKPCGFPIEQNHRLGLANGELLSNPESYRRLV--G 1244
Query: 165 S*GILLLHVLSLAYSVHSLAQFMQSPRTNYW*AALRVV*YLKKRPGQGILLLFDS 1
L + LAYSVH ++QFMQ PR +W AALRVV YLK PGQG+LL DS
Sbjct: 1245 RLIYLAVTRPDLAYSVHIISQFMQEPRIEHWEAALRVVRYLKGTPGQGVLLRADS 1299
>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
Length = 1129
Score = 67.8 bits (164), Expect = 1e-09
Identities = 47/115 (40%), Positives = 65/115 (56%), Gaps = 6/115 (5%)
Frame = -1
Query: 327 RNSTRIYLRQQKYAFEVISEARLTDPR------QWSPIKGW*SPRVLSSPCPIDIVA*SG 166
R+S ++L Q+KY +++SEA L + + + G + +LS+P + G
Sbjct: 855 RSSAGLFLCQRKYTLDIVSEAGLLGAKPCGFSIEQNHRLGLANGELLSNPESYRRLV--G 912
Query: 165 S*GILLLHVLSLAYSVHSLAQFMQSPRTNYW*AALRVV*YLKKRPGQGILLLFDS 1
L + +LAYSVH L+QFMQ PR +W ALRVV YLK PGQGILL DS
Sbjct: 913 RLIYLAVTRPNLAYSVHILSQFMQEPRIEHWEVALRVVHYLKGTPGQGILLRADS 967
>emb|CAN76913.1| hypothetical protein VITISV_037050 [Vitis vinifera]
Length = 992
Score = 67.8 bits (164), Expect = 1e-09
Identities = 48/115 (41%), Positives = 64/115 (55%), Gaps = 6/115 (5%)
Frame = -1
Query: 327 RNSTRIYLRQQKYAFEVISEARLTD------PRQWSPIKGW*SPRVLSSPCPIDIVA*SG 166
R+S ++L Q+KY ++ SEA L P + + I G + +L +P + G
Sbjct: 804 RSSAGLFLCQRKYKLDIXSEAXLLGAKPCGFPIEKNHILGLANGELLXNPESYRRLV--G 861
Query: 165 S*GILLLHVLSLAYSVHSLAQFMQSPRTNYW*AALRVV*YLKKRPGQGILLLFDS 1
L + LAYSVH L+QFMQ PR +W AALRVV YLK PGQGILL D+
Sbjct: 862 RLIYLAVTRPDLAYSVHILSQFMQEPRIEHWEAALRVVRYLKGTPGQGILLRADT 916
>emb|CAN60609.1| hypothetical protein VITISV_036599 [Vitis vinifera]
Length = 1455
Score = 44.7 bits (104), Expect(2) = 2e-09
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = -3
Query: 250 TPMEPNQRLVKSTSAFFAMPNRYRRLIGKLRHLTLTR 140
TPM+PN +LV P RYRRL+GKL +LT+TR
Sbjct: 1232 TPMDPNVKLVPGQGEPLGDPGRYRRLVGKLNYLTITR 1268
Score = 42.4 bits (98), Expect(2) = 2e-09
Identities = 16/39 (41%), Positives = 29/39 (74%)
Frame = -1
Query: 132 LAYSVHSLAQFMQSPRTNYW*AALRVV*YLKKRPGQGIL 16
+++ V ++QF+QSP ++W A +R++ Y+K PGQG+L
Sbjct: 1271 ISFPVSVVSQFLQSPCDSHWDAVIRILRYIKSTPGQGVL 1309
>emb|CAN75744.1| hypothetical protein VITISV_040125 [Vitis vinifera]
Length = 1257
Score = 44.7 bits (104), Expect(2) = 2e-09
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = -3
Query: 250 TPMEPNQRLVKSTSAFFAMPNRYRRLIGKLRHLTLTR 140
TPM+PN +LV P RYRRL+GKL +LT+TR
Sbjct: 1013 TPMDPNVKLVPGQGEPLGDPGRYRRLVGKLNYLTITR 1049
Score = 42.4 bits (98), Expect(2) = 2e-09
Identities = 16/39 (41%), Positives = 29/39 (74%)
Frame = -1
Query: 132 LAYSVHSLAQFMQSPRTNYW*AALRVV*YLKKRPGQGIL 16
+++ V ++QF+QSP ++W A +R++ Y+K PGQG+L
Sbjct: 1052 ISFPVSVVSQFLQSPCDSHWDAVIRILRYIKSTPGQGVL 1090
>emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]
Length = 1461
Score = 67.0 bits (162), Expect = 2e-09
Identities = 46/113 (40%), Positives = 65/113 (57%), Gaps = 4/113 (3%)
Frame = -1
Query: 327 RNSTRIYLRQQKYAFEVISEARLTDPRQWS-PIKGW*SPRVLSSPCPIDIVA*SGS*GIL 151
R+S ++L Q+KY +++SEA L + PI+ + + ++ + G L
Sbjct: 1187 RSSAGLFLCQRKYTLDIVSEAGLLGAKPCGFPIEQNHRLGLANGELLSNLESYRRLVGRL 1246
Query: 150 LLHVLS---LAYSVHSLAQFMQSPRTNYW*AALRVV*YLKKRPGQGILLLFDS 1
+ ++ LAYSVH L+QFMQ PR +W AALRVV YLK PGQGILL DS
Sbjct: 1247 IYLAVTRPDLAYSVHILSQFMQEPRIEHWEAALRVVHYLKGTPGQGILLRADS 1299
>emb|CAN64462.1| hypothetical protein VITISV_008322 [Vitis vinifera]
Length = 242
Score = 44.7 bits (104), Expect(2) = 3e-09
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = -3
Query: 250 TPMEPNQRLVKSTSAFFAMPNRYRRLIGKLRHLTLTR 140
TPM+PN +LV P RYRRL+GKL +LT+TR
Sbjct: 9 TPMDPNVKLVPGQGEPLGDPGRYRRLVGKLNYLTITR 45
Score = 42.4 bits (98), Expect(2) = 3e-09
Identities = 16/39 (41%), Positives = 29/39 (74%)
Frame = -1
Query: 132 LAYSVHSLAQFMQSPRTNYW*AALRVV*YLKKRPGQGIL 16
+++ V ++QF+QSP ++W A +R++ Y+K PGQG+L
Sbjct: 48 ISFPVSVVSQFLQSPCDSHWDAVIRILRYIKSTPGQGVL 86
>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
Length = 1178
Score = 65.5 bits (158), Expect = 7e-09
Identities = 48/115 (41%), Positives = 64/115 (55%), Gaps = 6/115 (5%)
Frame = -1
Query: 327 RNSTRIYLRQQKYAFEVISEARLTDPRQWS-PIK-----GW*SPRVLSSPCPIDIVA*SG 166
R+S ++L Q+KY +++SEA L + PI+ + +LS+P + G
Sbjct: 904 RSSAGLFLCQRKYTLDIVSEAGLLGAKPCGFPIEQNHRLXLANGELLSNPESYRRLV--G 961
Query: 165 S*GILLLHVLSLAYSVHSLAQFMQSPRTNYW*AALRVV*YLKKRPGQGILLLFDS 1
L + LAYSVH L+QFM PR +W AALRVV YLK PGQGILL DS
Sbjct: 962 RLIYLAVTRPDLAYSVHILSQFMXEPRIEHWEAALRVVRYLKGTPGQGILLRADS 1016
>emb|CAN69815.1| hypothetical protein VITISV_010421 [Vitis vinifera]
Length = 584
Score = 43.9 bits (102), Expect(2) = 2e-08
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = -3
Query: 253 STPMEPNQRLVKSTSAFFAMPNRYRRLIGKLRHLTLTRLE 134
STPME N +L+ P+ YRRL+G+L +LT+TRLE
Sbjct: 339 STPMEENNKLLPXVGDLLKNPSTYRRLVGQLIYLTITRLE 378
Score = 40.4 bits (93), Expect(2) = 2e-08
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = -1
Query: 138 LSLAYSVHSLAQFMQSPRTNYW*AALRVV*YLKKRPGQGI 19
L ++YSVH L+QFMQ PR + ++ YLK PGQG+
Sbjct: 377 LEISYSVHILSQFMQEPRKPHLDVVHHLLQYLKGAPGQGL 416
>gb|EOY10542.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma
cacao]
Length = 527
Score = 48.5 bits (114), Expect(2) = 3e-08
Identities = 21/40 (52%), Positives = 28/40 (70%)
Frame = -1
Query: 132 LAYSVHSLAQFMQSPRTNYW*AALRVV*YLKKRPGQGILL 13
+ YSVH L+QFM PR +W AALR++ YLK P +G+ L
Sbjct: 422 ICYSVHILSQFMHQPRQGHWQAALRILRYLKLAPSKGLFL 461
Score = 35.0 bits (79), Expect(2) = 3e-08
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = -3
Query: 247 PMEPNQRLVKSTSAFFAMPNRYRRLIGKLRHLTLTRLEPC 128
P+E N +L S P+ Y RLIG+L +LT+TR + C
Sbjct: 384 PIEQNHKLALDDSDLLDDPSFYSRLIGRLIYLTITRPDIC 423
>emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]
Length = 1157
Score = 62.4 bits (150), Expect = 6e-08
Identities = 45/131 (34%), Positives = 56/131 (42%), Gaps = 24/131 (18%)
Frame = -1
Query: 324 NSTRIYLRQQKYAFEVISEARLT------------------------DPRQWSPIKGW*S 217
NS I+L Q+KY ++ISE L DPRQ+ + GW
Sbjct: 931 NSDGIFLCQRKYTLDIISEVGLLGAKSAGTPLEQNHKLALVANFDLRDPRQYRRLVGWLI 990
Query: 216 PRVLSSPCPIDIVA*SGS*GILLLHVLSLAYSVHSLAQFMQSPRTNYW*AALRVV*YLKK 37
+++ P L+Y VH LAQFMQ P +W ALRVV YLK
Sbjct: 991 YLMITQP--------------------ELSYCVHMLAQFMQQPNDEHWEVALRVVRYLKG 1030
Query: 36 RPGQGILLLFD 4
GQGILL D
Sbjct: 1031 NLGQGILLRTD 1041