BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00009068
         (2501 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006352367.1| PREDICTED: transcription initiation factor I...   542   e-151
ref|XP_006352364.1| PREDICTED: transcription initiation factor I...   542   e-151
ref|XP_004250258.1| PREDICTED: transcription initiation factor I...   533   e-148
ref|XP_002322538.2| transcription initiation factor IIF alpha su...   520   e-144
ref|XP_006467340.1| PREDICTED: transcription initiation factor I...   516   e-143
ref|XP_006449854.1| hypothetical protein CICLE_v10014841mg [Citr...   516   e-143
ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|...   516   e-143
emb|CBI33123.3| unnamed protein product [Vitis vinifera]              510   e-141
ref|XP_002308775.1| transcription initiation factor IIF alpha su...   509   e-141
gb|EOY28869.1| Transcription activators,DNA binding,RNA polymera...   508   e-141
ref|XP_002262798.2| PREDICTED: transcription initiation factor I...   503   e-139
ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Popu...   500   e-138
gb|ESW26005.1| hypothetical protein PHAVU_003G083500g [Phaseolus...   496   e-137
ref|XP_004152016.1| PREDICTED: transcription initiation factor I...   493   e-136
gb|EMJ12738.1| hypothetical protein PRUPE_ppa003970mg [Prunus pe...   491   e-136
gb|ESW19654.1| hypothetical protein PHAVU_006G143600g [Phaseolus...   481   e-133
ref|XP_006586768.1| PREDICTED: transcription initiation factor I...   479   e-132
ref|XP_002529600.1| tfiif-alpha, putative [Ricinus communis] gi|...   464   e-128
ref|XP_006857695.1| hypothetical protein AMTR_s00061p00167160 [A...   462   e-127
ref|XP_004486214.1| PREDICTED: transcription initiation factor I...   457   e-125

>ref|XP_006352367.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            isoform X4 [Solanum tuberosum]
          Length = 535

 Score =  542 bits (1397), Expect = e-151
 Identities = 300/538 (55%), Positives = 337/538 (62%), Gaps = 1/538 (0%)
 Frame = +3

Query: 255  MSIDLILKPSCSVCGSSQELYGSTCKHLTLCVNCGKGMAEKRAKCYECGSIITRLIREYN 434
            MSIDLILKPSCS CGSS +LYGS+CKHLTLC++CGK MAE R KCYECG+ +TRLIREYN
Sbjct: 1    MSIDLILKPSCSRCGSSSDLYGSSCKHLTLCLSCGKNMAETRDKCYECGTPVTRLIREYN 60

Query: 435  VRACSSSDKNYFIGRFISGLPNFSRKKSENKWSLQKEGLQGRQVTDTLREKYKNKPWLLE 614
            VRACSS+DKN+FI RF SGLP FS+KK+++KW+LQKEGLQGRQVTDTLREKYKNKPWLLE
Sbjct: 61   VRACSSNDKNHFIARFASGLPKFSKKKNDSKWTLQKEGLQGRQVTDTLREKYKNKPWLLE 120

Query: 615  DETGT-QFHGVLEGAQSATYYLLMLQGREFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMK 791
            DETG  QFHG LEGAQSA YYLLM+QG E  AIPAGSWYNFNKVAQYKQLTLEEAEEKMK
Sbjct: 121  DETGQFQFHGHLEGAQSAQYYLLMMQGEELFAIPAGSWYNFNKVAQYKQLTLEEAEEKMK 180

Query: 792  NRRRTADGYERWMMKAANNGAAAFGEVEKFDDKEAVAXXXXXXXXXXXXXXEAHVSDRGX 971
            NRR+TADGY+RWMMKAANNG AAFGEVE+FDDKE  +              E + SD G 
Sbjct: 181  NRRKTADGYQRWMMKAANNGPAAFGEVERFDDKEGGSGGTRGRKKTSGDEDEGNASDHGD 240

Query: 972  XXXXXXXXRKNRLQLNKKSXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXXXXXX 1151
                    RKNRL LNK+                          WEH             
Sbjct: 241  EDEEEEAARKNRLGLNKRGIDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDEAVGN 300

Query: 1152 XXXXXXXLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXANGLNXXXXXXX 1331
                   LAPEIPAPPEIKQ                            ANGLN       
Sbjct: 301  DPEEREDLAPEIPAPPEIKQDEDDEEEGEEEGGGLSKSGKELKKLLGKANGLNESDAEDD 360

Query: 1332 XXXXXXXXXISPALAPKQKEALKEEPTENTSPVKPPTSGSARGTPSTSKSAKGKRKMNSE 1511
                     ISP LAPK KEA KEEP E  SP+KP  SGS RGTP TSKSAK KRK N +
Sbjct: 361  DDDDDTEEDISPVLAPKPKEAPKEEPVETNSPLKPAASGSNRGTP-TSKSAKTKRKANGD 419

Query: 1512 EAKATNSAPLKKVKSENDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAE 1691
            E+K T+ APLKKVK+E D                                      VT +
Sbjct: 420  ESKPTSGAPLKKVKTETD---AKPGKDETPSSAKNSALPKGASSSSKTAPSPATGPVTED 476

Query: 1692 EIKAVLLQSQQVTTQDLVAKFRSRLKSKEDKDAFAAVLRKISRIKRDENNKTSYIILR 1865
            EI+AVLLQ + VTTQDLV++F+SRLK KEDK AFA VLRKIS+I++     +SY++LR
Sbjct: 477  EIRAVLLQRKPVTTQDLVSQFKSRLKCKEDKAAFAEVLRKISKIQKTTTG-SSYVVLR 533


>ref|XP_006352364.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            isoform X1 [Solanum tuberosum]
            gi|565371548|ref|XP_006352365.1| PREDICTED: transcription
            initiation factor IIF subunit alpha-like isoform X2
            [Solanum tuberosum] gi|565371550|ref|XP_006352366.1|
            PREDICTED: transcription initiation factor IIF subunit
            alpha-like isoform X3 [Solanum tuberosum]
          Length = 538

 Score =  542 bits (1397), Expect = e-151
 Identities = 300/538 (55%), Positives = 337/538 (62%), Gaps = 1/538 (0%)
 Frame = +3

Query: 255  MSIDLILKPSCSVCGSSQELYGSTCKHLTLCVNCGKGMAEKRAKCYECGSIITRLIREYN 434
            MSIDLILKPSCS CGSS +LYGS+CKHLTLC++CGK MAE R KCYECG+ +TRLIREYN
Sbjct: 1    MSIDLILKPSCSRCGSSSDLYGSSCKHLTLCLSCGKNMAETRDKCYECGTPVTRLIREYN 60

Query: 435  VRACSSSDKNYFIGRFISGLPNFSRKKSENKWSLQKEGLQGRQVTDTLREKYKNKPWLLE 614
            VRACSS+DKN+FI RF SGLP FS+KK+++KW+LQKEGLQGRQVTDTLREKYKNKPWLLE
Sbjct: 61   VRACSSNDKNHFIARFASGLPKFSKKKNDSKWTLQKEGLQGRQVTDTLREKYKNKPWLLE 120

Query: 615  DETGT-QFHGVLEGAQSATYYLLMLQGREFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMK 791
            DETG  QFHG LEGAQSA YYLLM+QG E  AIPAGSWYNFNKVAQYKQLTLEEAEEKMK
Sbjct: 121  DETGQFQFHGHLEGAQSAQYYLLMMQGEELFAIPAGSWYNFNKVAQYKQLTLEEAEEKMK 180

Query: 792  NRRRTADGYERWMMKAANNGAAAFGEVEKFDDKEAVAXXXXXXXXXXXXXXEAHVSDRGX 971
            NRR+TADGY+RWMMKAANNG AAFGEVE+FDDKE  +              E + SD G 
Sbjct: 181  NRRKTADGYQRWMMKAANNGPAAFGEVERFDDKEGGSGGTRGRKKTSGDEDEGNASDHGD 240

Query: 972  XXXXXXXXRKNRLQLNKKSXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXXXXXX 1151
                    RKNRL LNK+                          WEH             
Sbjct: 241  EDEEEEAARKNRLGLNKRGIDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDEAVGN 300

Query: 1152 XXXXXXXLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXANGLNXXXXXXX 1331
                   LAPEIPAPPEIKQ                            ANGLN       
Sbjct: 301  DPEEREDLAPEIPAPPEIKQDEDDEEEGEEEGGGLSKSGKELKKLLGKANGLNESDAEDD 360

Query: 1332 XXXXXXXXXISPALAPKQKEALKEEPTENTSPVKPPTSGSARGTPSTSKSAKGKRKMNSE 1511
                     ISP LAPK KEA KEEP E  SP+KP  SGS RGTP TSKSAK KRK N +
Sbjct: 361  DDDDDTEEDISPVLAPKPKEAPKEEPVETNSPLKPAASGSNRGTP-TSKSAKTKRKANGD 419

Query: 1512 EAKATNSAPLKKVKSENDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAE 1691
            E+K T+ APLKKVK+E D                                      VT +
Sbjct: 420  ESKPTSGAPLKKVKTETD---AKPGKDETPSSAKNSALPKGASSSSKTAPSPATGPVTED 476

Query: 1692 EIKAVLLQSQQVTTQDLVAKFRSRLKSKEDKDAFAAVLRKISRIKRDENNKTSYIILR 1865
            EI+AVLLQ + VTTQDLV++F+SRLK KEDK AFA VLRKIS+I++     +SY++LR
Sbjct: 477  EIRAVLLQRKPVTTQDLVSQFKSRLKCKEDKAAFAEVLRKISKIQKTTTG-SSYVVLR 533


>ref|XP_004250258.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Solanum lycopersicum]
          Length = 534

 Score =  533 bits (1373), Expect = e-148
 Identities = 298/538 (55%), Positives = 336/538 (62%), Gaps = 1/538 (0%)
 Frame = +3

Query: 255  MSIDLILKPSCSVCGSSQELYGSTCKHLTLCVNCGKGMAEKRAKCYECGSIITRLIREYN 434
            MSIDLILKPSCS CGSS +LYGS+CKHLTLC++CGK MAE R KCYECG+ +TRLIREYN
Sbjct: 1    MSIDLILKPSCSRCGSSSDLYGSSCKHLTLCLSCGKNMAETRDKCYECGTPVTRLIREYN 60

Query: 435  VRACSSSDKNYFIGRFISGLPNFSRKKSENKWSLQKEGLQGRQVTDTLREKYKNKPWLLE 614
            VRACSS+DKN+FI RF SGLP FS+KK+++KW+LQKEGLQGRQVTDTLREKYKNKPWLLE
Sbjct: 61   VRACSSNDKNHFIARFASGLPKFSKKKNDSKWTLQKEGLQGRQVTDTLREKYKNKPWLLE 120

Query: 615  DETGT-QFHGVLEGAQSATYYLLMLQGREFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMK 791
            DETG  QFHG LEGAQSA YYLLM+QG E  AIPAGSWYNFNKVAQYKQLTLEEAEEKMK
Sbjct: 121  DETGQFQFHGHLEGAQSAQYYLLMMQGEELFAIPAGSWYNFNKVAQYKQLTLEEAEEKMK 180

Query: 792  NRRRTADGYERWMMKAANNGAAAFGEVEKFDDKEAVAXXXXXXXXXXXXXXEAHVSDRGX 971
            NRR+TADGY+RWMMKAANNG AAFGE+E+FDDKE  +              E + SD G 
Sbjct: 181  NRRKTADGYQRWMMKAANNGPAAFGELERFDDKEGGSGGTRGRKKTSGDEDEGNASDHGD 240

Query: 972  XXXXXXXXRKNRLQLNKKSXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXXXXXX 1151
                    RKNRL LNK+                          WEH             
Sbjct: 241  EDEEEEAARKNRLGLNKRGIDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDEAVGN 300

Query: 1152 XXXXXXXLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXANGLNXXXXXXX 1331
                   LAPEIPAPPEIKQ                            ANGLN       
Sbjct: 301  DPEEREDLAPEIPAPPEIKQDEDDEEEGEEEGGGLSKSGKELKKLLGKANGLN-ESDEDD 359

Query: 1332 XXXXXXXXXISPALAPKQKEALKEEPTENTSPVKPPTSGSARGTPSTSKSAKGKRKMNSE 1511
                     ISP LAPK KEA KEEP E  SP+K   SGS RGTP TSKSAK KRK N +
Sbjct: 360  DDDDDTEEDISPVLAPKPKEAPKEEPVETNSPLKAAASGSNRGTP-TSKSAKTKRKANGD 418

Query: 1512 EAKATNSAPLKKVKSENDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAE 1691
            E+K T+ APLKKVK+E D                                      VT +
Sbjct: 419  ESKPTSGAPLKKVKTEAD---AKPGKDETPSSAKNTALPKGASSSSKTAPSSATGPVTED 475

Query: 1692 EIKAVLLQSQQVTTQDLVAKFRSRLKSKEDKDAFAAVLRKISRIKRDENNKTSYIILR 1865
            EI+AVLLQ + VTTQDLV++F+SRLK KEDK AFA VLRKIS+I++     +SY++LR
Sbjct: 476  EIRAVLLQRKPVTTQDLVSQFKSRLKCKEDKAAFAEVLRKISKIQKTTTG-SSYVVLR 532


>ref|XP_002322538.2| transcription initiation factor IIF alpha subunit family protein
            [Populus trichocarpa] gi|550320589|gb|EEF04299.2|
            transcription initiation factor IIF alpha subunit family
            protein [Populus trichocarpa]
          Length = 540

 Score =  520 bits (1340), Expect = e-144
 Identities = 287/543 (52%), Positives = 345/543 (63%), Gaps = 5/543 (0%)
 Frame = +3

Query: 255  MSIDLILKPSCSVCGSSQELYGSTCKHLTLCVNCGKGMAEKRAKCYECGSIITRLIREYN 434
            MS DL+LKPSCS CGS+ +LYGS CKH+TLC+NCGK MAE R KC++CG+ ++RLIREYN
Sbjct: 1    MSFDLLLKPSCSGCGSTTDLYGSNCKHMTLCLNCGKTMAENRGKCFDCGTTVSRLIREYN 60

Query: 435  VRACSSSDKNYFIGRFISGLPNFSRKK-SENKWSLQKEGLQGRQVTDTLREKYKNKPWLL 611
            VRA +SSDKNYFIGRF++GLP+FS+KK +ENKWSL KEG+ GRQ+TD LREK+KNKPWLL
Sbjct: 61   VRASTSSDKNYFIGRFVTGLPSFSKKKNAENKWSLHKEGILGRQITDALREKFKNKPWLL 120

Query: 612  EDETG-TQFHGVLEGAQSATYYLLMLQGREFVAIPAGSW--YNFNKVAQYKQLTLEEAEE 782
            EDETG +Q+ G LEG+QSATYYLLM+ G+EFVAIPAGSW  YNFNKVA YKQLTLEEAEE
Sbjct: 121  EDETGQSQYQGHLEGSQSATYYLLMMTGKEFVAIPAGSWYVYNFNKVAHYKQLTLEEAEE 180

Query: 783  KMKNRRRTADGYERWMMKAANNGAAAFGEVEKFDDKEAV-AXXXXXXXXXXXXXXEAHVS 959
            KMKNRR+TADGYERWMMKAANNGAAAFGEVEK DDKE V A              E +VS
Sbjct: 181  KMKNRRKTADGYERWMMKAANNGAAAFGEVEKVDDKEGVSAGGRGGRRKASGDDDEGNVS 240

Query: 960  DRGXXXXXXXXXRKNRLQLNKKSXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXX 1139
            DRG         RK+RL LNK+                          WEH         
Sbjct: 241  DRGEEDEEEEAGRKSRLGLNKQGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDE 300

Query: 1140 XXXXXXXXXXXLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXANGLNXXX 1319
                       LAPE+PAPPEIKQ                            ANGLN   
Sbjct: 301  AVAIDPEEREDLAPEVPAPPEIKQ-DEDDEDEENEEGGLSKSGKELKKLLGKANGLNESD 359

Query: 1320 XXXXXXXXXXXXXISPALAPKQKEALKEEPTENTSPVKPPTSGSARGTPSTSKSAKGKRK 1499
                         ISP LAPKQK+ + +E   + SP KP  SGSA+GTPSTSKSAKGKRK
Sbjct: 360  VEDDDDDEDMDDDISPVLAPKQKDVVPKEEAADISPAKPTPSGSAKGTPSTSKSAKGKRK 419

Query: 1500 MNSEEAKATNSAPLKKVKSENDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1679
            +N E+AK++N AP+KKVK+EN+                                      
Sbjct: 420  LNGEDAKSSNGAPVKKVKTENE-VKPAVKEESSPATKGTATPKVTPPSSKTGSTSGSTGP 478

Query: 1680 VTAEEIKAVLLQSQQVTTQDLVAKFRSRLKSKEDKDAFAAVLRKISRIKRDENNKTSYII 1859
            VT EEI+AVLLQ+  VTTQDLVA+F+SRL++ EDK AFA +LR+IS+I++   + ++Y++
Sbjct: 479  VTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQK--TSGSNYVV 536

Query: 1860 LRN 1868
            LR+
Sbjct: 537  LRD 539


>ref|XP_006467340.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            isoform X1 [Citrus sinensis]
            gi|568825955|ref|XP_006467341.1| PREDICTED: transcription
            initiation factor IIF subunit alpha-like isoform X2
            [Citrus sinensis]
          Length = 538

 Score =  516 bits (1330), Expect = e-143
 Identities = 285/542 (52%), Positives = 335/542 (61%), Gaps = 5/542 (0%)
 Frame = +3

Query: 255  MSIDLILKPSCSVCGSSQELYGSTCKHLTLCVNCGKGMAEKRAKCYECGSIITRLIREYN 434
            MS DL+LKP CS CGS  +LYGS CKH+TLC+ CGK MAE +AKC++CG+I+TRLIREYN
Sbjct: 1    MSFDLLLKPQCSGCGSQADLYGSNCKHMTLCLTCGKTMAENKAKCFDCGAIVTRLIREYN 60

Query: 435  VRACSSSDKNYFIGRFISGLPNFSRKKS-ENKWSLQKEGLQGRQVTDTLREKYKNKPWLL 611
            VR  +SSDKNYFIGRF+SGLP+FS+KK+ ENKW+L K+GLQGRQVTDTLREKYKNKPW+L
Sbjct: 61   VRPSNSSDKNYFIGRFVSGLPSFSKKKNAENKWTLHKDGLQGRQVTDTLREKYKNKPWML 120

Query: 612  EDETG-TQFHGVLEGAQSATYYLLMLQGREFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 788
            EDETG  Q+ G LEG+QSATYYLL++  +EFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQAQYQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 789  KNRRRTADGYERWMMKAANNGAAAFGEVEKFDDKEAVAXXXXXXXXXXXXXXEAHVSDRG 968
            KNRR+TADGYERWMMKAANNGAAAFGEVEK DDKE+                E +VSDRG
Sbjct: 181  KNRRKTADGYERWMMKAANNGAAAFGEVEKPDDKESAGTGGRGRSKKSGDEDEGNVSDRG 240

Query: 969  XXXXXXXXXRKNRLQLNKKSXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXXXXX 1148
                     RKNRL LNK+                          WEH            
Sbjct: 241  EEDEDEEAKRKNRLGLNKRGEDDDEEGPRGGDLDLDEDDVEKGDDWEHEEIFTDDDEAVG 300

Query: 1149 XXXXXXXXLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXANGLN---XXX 1319
                    LAPE+PAPPEIKQ                            ANGLN      
Sbjct: 301  NDPEEREDLAPEVPAPPEIKQ--DEEDEDEEEEGGLSKSGKELKKLLGRANGLNESDAED 358

Query: 1320 XXXXXXXXXXXXXISPALAPKQKEALKEEPTENTSPVKPPTSGSARGTPSTSKSAKGKRK 1499
                          SP LAPK K+  K+E   + SP KP  SGS R TPSTSKSAKGKRK
Sbjct: 359  DDDEDDDMEDEVGFSPILAPKHKDTPKKEEPADNSPAKPAPSGSGRATPSTSKSAKGKRK 418

Query: 1500 MNSEEAKATNSAPLKKVKSENDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1679
             N ++A+A + APLKKVK+EN+                                      
Sbjct: 419  SNGDDARAPSGAPLKKVKTENE---TKSSARDENVSASKSSAPAKGASSSRTGSTSASGP 475

Query: 1680 VTAEEIKAVLLQSQQVTTQDLVAKFRSRLKSKEDKDAFAAVLRKISRIKRDENNKTSYII 1859
            VTAEEI+AVLLQ   VTTQDLVAKF+ RL+S ED+ AFA +L++IS+I++  N  ++Y++
Sbjct: 476  VTAEEIRAVLLQQAPVTTQDLVAKFKPRLRSTEDRTAFADILKRISKIQK-TNGPSNYVV 534

Query: 1860 LR 1865
            LR
Sbjct: 535  LR 536


>ref|XP_006449854.1| hypothetical protein CICLE_v10014841mg [Citrus clementina]
            gi|567915083|ref|XP_006449855.1| hypothetical protein
            CICLE_v10014841mg [Citrus clementina]
            gi|557552465|gb|ESR63094.1| hypothetical protein
            CICLE_v10014841mg [Citrus clementina]
            gi|557552466|gb|ESR63095.1| hypothetical protein
            CICLE_v10014841mg [Citrus clementina]
          Length = 538

 Score =  516 bits (1329), Expect = e-143
 Identities = 285/542 (52%), Positives = 335/542 (61%), Gaps = 5/542 (0%)
 Frame = +3

Query: 255  MSIDLILKPSCSVCGSSQELYGSTCKHLTLCVNCGKGMAEKRAKCYECGSIITRLIREYN 434
            MS DL+LKP CS CGS  +LYGS CKH+TLC+ CGK MAE +AKC++CG+I+TRLIREYN
Sbjct: 1    MSFDLLLKPQCSGCGSQVDLYGSNCKHMTLCLTCGKTMAENKAKCFDCGAIVTRLIREYN 60

Query: 435  VRACSSSDKNYFIGRFISGLPNFSRKKS-ENKWSLQKEGLQGRQVTDTLREKYKNKPWLL 611
            VR  +SSDKNYFIGRF+SGLP+FS+KK+ ENKW+L K+GLQGRQVTDTLREKYKNKPW+L
Sbjct: 61   VRPSNSSDKNYFIGRFVSGLPSFSKKKNAENKWTLHKDGLQGRQVTDTLREKYKNKPWML 120

Query: 612  EDETG-TQFHGVLEGAQSATYYLLMLQGREFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 788
            EDETG  Q+ G LEG+QSATYYLL++  +EFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQAQYQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 789  KNRRRTADGYERWMMKAANNGAAAFGEVEKFDDKEAVAXXXXXXXXXXXXXXEAHVSDRG 968
            KNRR+TADGYERWMMKAANNGAAAFGEVEK DDKE+                E +VSDRG
Sbjct: 181  KNRRKTADGYERWMMKAANNGAAAFGEVEKPDDKESAGTGGRGRSKKSGDEDEGNVSDRG 240

Query: 969  XXXXXXXXXRKNRLQLNKKSXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXXXXX 1148
                     RKNRL LNK+                          WEH            
Sbjct: 241  EEDEDEEAKRKNRLGLNKRGEDDDEEGPRGGDLDLDEDDVEKGDDWEHEEIFTDDDEAVG 300

Query: 1149 XXXXXXXXLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXANGLN---XXX 1319
                    LAPE+PAPPEIKQ                            ANGLN      
Sbjct: 301  NDPEEREDLAPEVPAPPEIKQ--DEEDEDEEEEGGLSKSGKELKKLLGRANGLNESDAED 358

Query: 1320 XXXXXXXXXXXXXISPALAPKQKEALKEEPTENTSPVKPPTSGSARGTPSTSKSAKGKRK 1499
                          SP LAPK K+  K+E   + SP KP  SGS R TPSTSKSAKGKRK
Sbjct: 359  DDDEDDDMEDEVGFSPILAPKHKDTPKKEEPADNSPAKPAPSGSGRATPSTSKSAKGKRK 418

Query: 1500 MNSEEAKATNSAPLKKVKSENDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1679
             N ++A+A + APLKKVK+EN+                                      
Sbjct: 419  SNGDDARAPSGAPLKKVKTENE---TKSSARDENVSASKSSAPAKGASSSRTGSTSASGP 475

Query: 1680 VTAEEIKAVLLQSQQVTTQDLVAKFRSRLKSKEDKDAFAAVLRKISRIKRDENNKTSYII 1859
            VTAEEI+AVLLQ   VTTQDLVAKF+ RL+S ED+ AFA +L++IS+I++  N  ++Y++
Sbjct: 476  VTAEEIRAVLLQQAPVTTQDLVAKFKPRLRSTEDRTAFADILKRISKIQK-TNGPSNYVV 534

Query: 1860 LR 1865
            LR
Sbjct: 535  LR 536


>ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|223541454|gb|EEF43004.1|
            tfiif-alpha, putative [Ricinus communis]
          Length = 533

 Score =  516 bits (1329), Expect = e-143
 Identities = 291/541 (53%), Positives = 343/541 (63%), Gaps = 4/541 (0%)
 Frame = +3

Query: 258  SIDLILKPSCSVCGSSQELYGSTCKHLTLCVNCGKGMAEKRAKCYECGSIITRLIREYNV 437
            ++DL+LK SCS CGS+ +LYGS CKH+TLC++CGK MAE  AKC++CG+ ++RLIREYNV
Sbjct: 3    TMDLMLKGSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENHAKCFDCGATVSRLIREYNV 62

Query: 438  RACSSSDKNYFIGRFISGLPNFSRKKS-ENKWSLQKEGLQGRQVTDTLREKYKNKPWLLE 614
            RA SSSDKNYFIGRF++GLP+FS+KK+ ENKWSLQKEGLQGRQ+TD LREKYKN+PWLLE
Sbjct: 63   RASSSSDKNYFIGRFVTGLPSFSKKKNAENKWSLQKEGLQGRQLTDALREKYKNRPWLLE 122

Query: 615  DETGT-QFHGVLEGAQSATYYLLMLQGREFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMK 791
            DETG  Q+ G LEG+QSATYYLL+LQG+EFVAIPA SWYNFNKVAQYKQLTLEEAEEKM+
Sbjct: 123  DETGQFQYQGHLEGSQSATYYLLILQGKEFVAIPASSWYNFNKVAQYKQLTLEEAEEKMR 182

Query: 792  NRRRTADGYERWMMKAANNGAAAFGEVEKFDDKEAVAXXXXXXXXXXXXXXEAHVSDRGX 971
            NRR+TADGYERWMMKAANNG AAFGEVEK DDK++ A              E +VSDRG 
Sbjct: 183  NRRKTADGYERWMMKAANNGPAAFGEVEKLDDKDSGAASGRGRKKAAGDDEEGNVSDRGD 242

Query: 972  XXXXXXXXRKNRLQLNKKSXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXXXXXX 1151
                    RKNRL LNK+                          WEH             
Sbjct: 243  EDEEEEAARKNRLGLNKRGGDDDEEGPRGGDHDIDDDDIEKGDDWEHEEIFTDDDEAVGN 302

Query: 1152 XXXXXXXLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXANGLN--XXXXX 1325
                   LAPE+PAPPEIKQ                            A GLN       
Sbjct: 303  DREEREDLAPEVPAPPEIKQ-DEDDEDEENEEGGLSKSGKELKKLLGRAGGLNDSDAEDD 361

Query: 1326 XXXXXXXXXXXISPALAPKQKEALKEEPTENTSPVKPPTSGSARGTPSTSKSAKGKRKMN 1505
                       ISP LAPKQ    KEEP +N SP KP TS S++GTPSTSKSAKGKRK+N
Sbjct: 362  DDDDDMDEDVSISPVLAPKQTP--KEEPADN-SPAKPMTSASSKGTPSTSKSAKGKRKLN 418

Query: 1506 SEEAKATNSAPLKKVKSENDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVT 1685
            S+EAK TN AP KKVK+EN+                                      VT
Sbjct: 419  SDEAKQTNVAPQKKVKTENE-----LKPTVKEESAPTSKSSATPKAAPPSAKTGSTSPVT 473

Query: 1686 AEEIKAVLLQSQQVTTQDLVAKFRSRLKSKEDKDAFAAVLRKISRIKRDENNKTSYIILR 1865
             EEI+AVLLQ+  VTTQDLVA+F+SRLKS EDK AFA +LR+IS+I++   + +SY++LR
Sbjct: 474  EEEIRAVLLQNGPVTTQDLVARFKSRLKSSEDKKAFADILRRISKIQK--TSGSSYVVLR 531

Query: 1866 N 1868
            +
Sbjct: 532  D 532


>emb|CBI33123.3| unnamed protein product [Vitis vinifera]
          Length = 539

 Score =  510 bits (1314), Expect = e-141
 Identities = 286/543 (52%), Positives = 335/543 (61%), Gaps = 5/543 (0%)
 Frame = +3

Query: 255  MSIDLILKPSCSVCGSSQELYGSTCKHLTLCVNCGKGMAEKRAKCYECGSIITRLIREYN 434
            MS DL+LKPSCS CGS+ +LYGS CKH+TLC++CGK MAE   KCY+CG+ +TRLIREYN
Sbjct: 1    MSFDLMLKPSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYDCGTPVTRLIREYN 60

Query: 435  VRACSSSDKNYFIGRFISGLPNFSRKKS-ENKWSLQKEGLQGRQVTDTLREKYKNKPWLL 611
            VR  SS DKNYFIGRF++GLP FS+KK+ +NKWSL KEGLQGRQV+D LREKYKNKPWLL
Sbjct: 61   VRTNSSGDKNYFIGRFVTGLPGFSKKKNADNKWSLHKEGLQGRQVSDALREKYKNKPWLL 120

Query: 612  EDETGT-QFHGVLEGAQSATYYLLMLQGREFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 788
            EDETG  Q+HG LEG+QSATYYLLM+QG+EFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQYQYHGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 789  KNRRRTADGYERWMMKAANNGAAAFGEVEKFDDKE--AVAXXXXXXXXXXXXXXEAHVSD 962
            KNRRRTADGY+RWMMKAANNG AAFGEVEK DDKE    A              E +VSD
Sbjct: 181  KNRRRTADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGGRGRKKQTGDEEEGNVSD 240

Query: 963  RGXXXXXXXXXRKNRLQLNKKSXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXXX 1142
            +          RKNRL LNK+S                         WEH          
Sbjct: 241  KAEEDEEEEAERKNRLGLNKRSGDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDEA 300

Query: 1143 XXXXXXXXXXLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXANGLN-XXX 1319
                      LAPE+PAPPEIKQ                            A G+N    
Sbjct: 301  VGNDPEEREDLAPEVPAPPEIKQDEEDEDDSNEEEGGLSKSGKELKKLLGKAAGMNDSDA 360

Query: 1320 XXXXXXXXXXXXXISPALAPKQKEALKEEPTENTSPVKPPTSGSARGTPSTSKSAKGKRK 1499
                         +SP LAPKQK+  KEEP +N SP+K  T+ SAR TP TSKS+KGKRK
Sbjct: 361  EDDDDDEEEDEIGLSPVLAPKQKDVPKEEPADN-SPMKSATA-SARSTPPTSKSSKGKRK 418

Query: 1500 MNSEEAKATNSAPLKKVKSENDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1679
             N ++ K TN  P KKVK+EN+                                      
Sbjct: 419  SNGDDMKTTNGGPPKKVKTENE-SKSSAKDEGPSPSKVTATPKGTPSSSVKTGSTSSAGP 477

Query: 1680 VTAEEIKAVLLQSQQVTTQDLVAKFRSRLKSKEDKDAFAAVLRKISRIKRDENNKTSYII 1859
            VT +EI+AVLLQ   VTTQDLVAKF++RLKS+EDK AFA +LR+IS+I++   N  +Y++
Sbjct: 478  VTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRRISKIQK--TNGPNYVV 535

Query: 1860 LRN 1868
            LR+
Sbjct: 536  LRD 538


>ref|XP_002308775.1| transcription initiation factor IIF alpha subunit family protein
            [Populus trichocarpa] gi|222854751|gb|EEE92298.1|
            transcription initiation factor IIF alpha subunit family
            protein [Populus trichocarpa]
          Length = 541

 Score =  509 bits (1311), Expect = e-141
 Identities = 286/544 (52%), Positives = 345/544 (63%), Gaps = 6/544 (1%)
 Frame = +3

Query: 255  MSIDLILKPSCSVCGSSQELYGSTCKHLTLCVNCGKGMAEKRAKCYECGSIITRLIREYN 434
            MS DL L+PSCS CGS+ +LYGS CKH+TLC+ CGK MAE R KC++CG+I+TRLIREYN
Sbjct: 1    MSFDLQLQPSCSGCGSTTDLYGSNCKHMTLCLTCGKTMAENRGKCFDCGAIVTRLIREYN 60

Query: 435  VRACSSSDKNYFIGRFISGLPNFSRKK-SENKWSLQKEGLQGRQVTDTLREKYKNKPWLL 611
            VRA +SS+KNYFIGRF++GLP FS+KK +ENKWSL KEG+ GRQ+TDTLREK+KNKPWLL
Sbjct: 61   VRASTSSEKNYFIGRFVTGLPGFSKKKNAENKWSLLKEGIHGRQITDTLREKFKNKPWLL 120

Query: 612  EDETGT-QFHGVLEGAQSATYYLLMLQGREFVAIPAGSW--YNFNKVAQYKQLTLEEAEE 782
            EDETG  Q+ G LEG+QSATYYLLM+ G+EFVAIPAGSW  YNFNKVA YKQLTLEEAEE
Sbjct: 121  EDETGQFQYQGHLEGSQSATYYLLMMSGKEFVAIPAGSWYGYNFNKVAHYKQLTLEEAEE 180

Query: 783  KMKNRRRTADGYERWMMKAANNGAAAFGEVEKFDDKEAV-AXXXXXXXXXXXXXXEAHVS 959
            KMKNRR+TADGYERWMMKAA+NGAAAFGEVEK DDK+ V A              E +VS
Sbjct: 181  KMKNRRKTADGYERWMMKAAHNGAAAFGEVEKPDDKDGVSAGGRGGRKKANGDDDEGNVS 240

Query: 960  DRGXXXXXXXXXRKNRLQLNKKSXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXX 1139
            D+G         RK+RL LNK                           WEH         
Sbjct: 241  DKGEEDEEEEAGRKSRLGLNKGGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDE 300

Query: 1140 XXXXXXXXXXXLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXANGLNXXX 1319
                       LAPE+PAPPEIKQ                            ANGLN   
Sbjct: 301  AVAIDPEEREDLAPEVPAPPEIKQ-DEEDEDEENEEGGLSKSGKELKKLLGKANGLNESD 359

Query: 1320 XXXXXXXXXXXXXISPALAPKQKEAL-KEEPTENTSPVKPPTSGSARGTPSTSKSAKGKR 1496
                         ISP LAPKQK+A+ KEEP +N SP KP   GSA+GTPSTSKSAKGKR
Sbjct: 360  AEDDDDDDDMDDDISPVLAPKQKDAVPKEEPADN-SPAKPTPPGSAKGTPSTSKSAKGKR 418

Query: 1497 KMNSEEAKATNSAPLKKVKSENDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1676
            K+N+++AK +N AP+KKVK+EN+                                     
Sbjct: 419  KLNADDAKTSNGAPVKKVKTENE-VKPTVKEESSPATKGTATPKIMPSSSKTGPTSGPTG 477

Query: 1677 XVTAEEIKAVLLQSQQVTTQDLVAKFRSRLKSKEDKDAFAAVLRKISRIKRDENNKTSYI 1856
             VT EEI+AVLLQ+  VTTQDLVA+F+SRL++ EDK AFA +LR+IS+I++   + ++++
Sbjct: 478  PVTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQK--TSGSNFV 535

Query: 1857 ILRN 1868
            +LR+
Sbjct: 536  VLRD 539


>gb|EOY28869.1| Transcription activators,DNA binding,RNA polymerase II transcription
            factors,catalytics,transcription initiation factors
            isoform 1 [Theobroma cacao]
          Length = 549

 Score =  508 bits (1309), Expect = e-141
 Identities = 290/553 (52%), Positives = 336/553 (60%), Gaps = 15/553 (2%)
 Frame = +3

Query: 255  MSIDLILKPSCSVCGSSQELYGSTCKHLTLCVNCGKGMAEKRAKCYECGSIITRLIREYN 434
            MS DL+LK SCS CGS+ +LYGS CKH+TLCV CGK MAE + KC+ECG+I+TRLIREYN
Sbjct: 1    MSFDLMLKSSCSGCGSTVDLYGSNCKHMTLCVTCGKTMAENQGKCFECGAIVTRLIREYN 60

Query: 435  VRACSSSDKNYFIGRFISGLPNFSRKKS-ENKWSLQKEGLQGRQVTDTLREKYKNKPWLL 611
            VR   S+DKN+FIGRF+SGLP+FS+KK+ ENKWSLQKEGLQGRQ+TD LREKYKNKPW+L
Sbjct: 61   VRPSPSTDKNFFIGRFMSGLPSFSKKKNAENKWSLQKEGLQGRQLTDPLREKYKNKPWML 120

Query: 612  EDETG-TQFHGVLEGAQSATYYLLMLQGREFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 788
            EDETG  Q+ G LEG+QSATYYLLM+QG+EFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQAQYQGHLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 789  KNRRRTADGYERWMMKAANNGAAAFGEVEKFDDKEAVAXXXXXXXXXXXXXXEAHVSDRG 968
            KNRR+TADGYERWMMKAANNGAAAFGEVEKFDDK+                 E HVSDRG
Sbjct: 181  KNRRKTADGYERWMMKAANNGAAAFGEVEKFDDKDNSVAGGKGRKKPTGDDDEGHVSDRG 240

Query: 969  XXXXXXXXXRKNRLQLNKKSXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXXXXX 1148
                     RKNRL L+KK                          WEH            
Sbjct: 241  EEDEEEEAARKNRLGLDKKGGDDDEEGPRGGDLDMDDDDIEKGDDWEH-EEIFTDDDEAV 299

Query: 1149 XXXXXXXXLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXANGLN-XXXXX 1325
                    LAPE+PAPPEIK+                            A GLN      
Sbjct: 300  GNEPEERDLAPEVPAPPEIKE--DEDEEDEEQEGGLSKSGKELKKLLGKAGGLNDSDADD 357

Query: 1326 XXXXXXXXXXXISPALAPKQKEALKEEPTENTSPVKPPTSGSARGTPSTSKSAKGKRKMN 1505
                        +PA A KQK+A KEEP +N SP+KP +S SARGT + SKSAKGKRK N
Sbjct: 358  DDDDDDDDDMSFNPAPASKQKDAPKEEPADN-SPMKPASSASARGTSTASKSAKGKRKAN 416

Query: 1506 SEEAKATNSAPLKKVKSEND------------XXXXXXXXXXXXXXXXXXXXXXXXXXXX 1649
             ++ KA+N  PLKKVKSE D                                        
Sbjct: 417  GDDTKASNGTPLKKVKSETDSKSSVKEESASASKGSVPPKGTPSSAKAGSTSSAVTSSSA 476

Query: 1650 XXXXXXXXXXVTAEEIKAVLLQSQQVTTQDLVAKFRSRLKSKEDKDAFAAVLRKISRIKR 1829
                      VT EEI+AVLLQ   VTT DLVAKF++RLKS EDK AFA +LR+IS+I++
Sbjct: 477  KAGSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFKARLKSPEDKKAFADILRRISKIQK 536

Query: 1830 DENNKTSYIILRN 1868
              N   +Y++LR+
Sbjct: 537  -TNGPNNYVVLRD 548


>ref|XP_002262798.2| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Vitis vinifera]
          Length = 534

 Score =  503 bits (1295), Expect = e-139
 Identities = 282/538 (52%), Positives = 331/538 (61%), Gaps = 5/538 (0%)
 Frame = +3

Query: 270  ILKPSCSVCGSSQELYGSTCKHLTLCVNCGKGMAEKRAKCYECGSIITRLIREYNVRACS 449
            +LKPSCS CGS+ +LYGS CKH+TLC++CGK MAE   KCY+CG+ +TRLIREYNVR  S
Sbjct: 1    MLKPSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYDCGTPVTRLIREYNVRTNS 60

Query: 450  SSDKNYFIGRFISGLPNFSRKKS-ENKWSLQKEGLQGRQVTDTLREKYKNKPWLLEDETG 626
            S DKNYFIGRF++GLP FS+KK+ +NKWSL KEGLQGRQV+D LREKYKNKPWLLEDETG
Sbjct: 61   SGDKNYFIGRFVTGLPGFSKKKNADNKWSLHKEGLQGRQVSDALREKYKNKPWLLEDETG 120

Query: 627  T-QFHGVLEGAQSATYYLLMLQGREFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRR 803
              Q+HG LEG+QSATYYLLM+QG+EFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRR
Sbjct: 121  QYQYHGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRR 180

Query: 804  TADGYERWMMKAANNGAAAFGEVEKFDDKE--AVAXXXXXXXXXXXXXXEAHVSDRGXXX 977
            TADGY+RWMMKAANNG AAFGEVEK DDKE    A              E +VSD+    
Sbjct: 181  TADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGGRGRKKQTGDEEEGNVSDKAEED 240

Query: 978  XXXXXXRKNRLQLNKKSXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXXXXXXXX 1157
                  RKNRL LNK+S                         WEH               
Sbjct: 241  EEEEAERKNRLGLNKRSGDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDEAVGNDP 300

Query: 1158 XXXXXLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXANGLN-XXXXXXXX 1334
                 LAPE+PAPPEIKQ                            A G+N         
Sbjct: 301  EEREDLAPEVPAPPEIKQDEEDEDDSNEEEGGLSKSGKELKKLLGKAAGMNDSDAEDDDD 360

Query: 1335 XXXXXXXXISPALAPKQKEALKEEPTENTSPVKPPTSGSARGTPSTSKSAKGKRKMNSEE 1514
                    +SP LAPKQK+  KEEP +N SP+K  T+ SAR TP TSKS+KGKRK N ++
Sbjct: 361  DEEEDEIGLSPVLAPKQKDVPKEEPADN-SPMKSATA-SARSTPPTSKSSKGKRKSNGDD 418

Query: 1515 AKATNSAPLKKVKSENDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAEE 1694
             K TN  P KKVK+EN+                                      VT +E
Sbjct: 419  MKTTNGGPPKKVKTENE-SKSSAKDEGPSPSKVTATPKGTPSSSVKTGSTSSAGPVTEDE 477

Query: 1695 IKAVLLQSQQVTTQDLVAKFRSRLKSKEDKDAFAAVLRKISRIKRDENNKTSYIILRN 1868
            I+AVLLQ   VTTQDLVAKF++RLKS+EDK AFA +LR+IS+I++   N  +Y++LR+
Sbjct: 478  IRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRRISKIQK--TNGPNYVVLRD 533


>ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Populus trichocarpa]
            gi|550335193|gb|ERP58675.1| hypothetical protein
            POPTR_0006s01070g [Populus trichocarpa]
          Length = 536

 Score =  500 bits (1287), Expect = e-138
 Identities = 285/549 (51%), Positives = 343/549 (62%), Gaps = 11/549 (2%)
 Frame = +3

Query: 255  MSIDLILKPSCSVCGSSQELYGSTCKHLTLCVNCGKGMAEKRAKCYECGSIITRLIREYN 434
            MS DL L+PSCS CGS+ +LYGS CKH+TLC+ CGK MAE R KC++CG+I+TRLIREYN
Sbjct: 1    MSFDLQLQPSCSGCGSTTDLYGSNCKHMTLCLTCGKTMAENRGKCFDCGAIVTRLIREYN 60

Query: 435  VRACSSSDKNYFIGRFISGLPNFSRKK-SENKWSLQKEGLQGRQVTDTLREKYKNKPWLL 611
            VRA +SS+KNYFIGRF++GLP FS+KK +ENKWSL KEG+ GRQ+TDTLREK+KNKPWLL
Sbjct: 61   VRASTSSEKNYFIGRFVTGLPGFSKKKNAENKWSLLKEGIHGRQITDTLREKFKNKPWLL 120

Query: 612  EDETGT-QFHGVLEGAQSATYYLLMLQGREFVAIPAGSW--YNFNKVAQYKQLTLEEAEE 782
            EDETG  Q+ G LEG+QSATYYLLM+ G+EFVAIPAGSW  YNFNKVA YKQLTLEEAEE
Sbjct: 121  EDETGQFQYQGHLEGSQSATYYLLMMSGKEFVAIPAGSWYGYNFNKVAHYKQLTLEEAEE 180

Query: 783  KMKNRRRTADGYERWMMKAANNGAAAFGEVEKFDDKEAV-AXXXXXXXXXXXXXXEAHVS 959
            KMKNRR+TADGYERWMMKAA+NGAAAFGEVEK DDK+ V A              E +VS
Sbjct: 181  KMKNRRKTADGYERWMMKAAHNGAAAFGEVEKPDDKDGVSAGGRGGRKKANGDDDEGNVS 240

Query: 960  DRGXXXXXXXXXRKNRLQLNKKSXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXX 1139
            D+G         RK+RL LNK                           WEH         
Sbjct: 241  DKGEEDEEEEAGRKSRLGLNKGGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDE 300

Query: 1140 XXXXXXXXXXXLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXANGLNXXX 1319
                       LAPE+PAPPEIKQ                            ANGLN   
Sbjct: 301  AVAIDPEEREDLAPEVPAPPEIKQ-DEEDEDEENEEGGLSKSGKELKKLLGKANGLNESD 359

Query: 1320 XXXXXXXXXXXXXISPALAPKQKEAL-KEEPTENTSPVKPPTSGSARGTPSTSKSAKGKR 1496
                         ISP LAPKQK+A+ KEEP +N SP KP   GSA+GTPSTSKSAKGKR
Sbjct: 360  AEDDDDDDDMDDDISPVLAPKQKDAVPKEEPADN-SPAKPTPPGSAKGTPSTSKSAKGKR 418

Query: 1497 KMNSEEAKATNSAPLKK-----VKSENDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1661
            K+N+++AK +N AP+KK     VK E+                                 
Sbjct: 419  KLNADDAKTSNGAPVKKEVKPTVKEESS-----------PATKGTATPKIMPSSSKTGPT 467

Query: 1662 XXXXXXVTAEEIKAVLLQSQQVTTQDLVAKFRSRLKSKEDKDAFAAVLRKISRIKRDENN 1841
                  VT EEI+AVLLQ+  VTTQDLVA+F+SRL++ EDK AFA +LR+IS+I++   +
Sbjct: 468  SGPTGPVTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQK--TS 525

Query: 1842 KTSYIILRN 1868
             +++++LR+
Sbjct: 526  GSNFVVLRD 534


>gb|ESW26005.1| hypothetical protein PHAVU_003G083500g [Phaseolus vulgaris]
          Length = 540

 Score =  496 bits (1276), Expect = e-137
 Identities = 280/544 (51%), Positives = 334/544 (61%), Gaps = 6/544 (1%)
 Frame = +3

Query: 255  MSIDLILKPSCSVCGSSQELYGSTCKHLTLCVNCGKGMAEKRAKCYECGSIITRLIREYN 434
            MSIDL+LKP+C  CGS+ +LYGS CKH+TLC+ CGK MAE +AKC++CG+ +TRLIREY+
Sbjct: 1    MSIDLLLKPTCGGCGSTTDLYGSNCKHMTLCLTCGKTMAENKAKCFDCGATVTRLIREYS 60

Query: 435  VRACSSSDKNYFIGRFISGLPNFSRKKS-ENKWSLQKEGLQGRQVTDTLREKYKNKPWLL 611
            VRA S SDK+YFIGRF+SGLP+FS+KKS ENKWSLQKEGLQ RQVTD LREKYKNKPWLL
Sbjct: 61   VRASSGSDKHYFIGRFVSGLPDFSKKKSAENKWSLQKEGLQSRQVTDALREKYKNKPWLL 120

Query: 612  EDETG-TQFHGVLEGAQSATYYLLMLQGREFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 788
            EDETG +QF G LEGAQSATYYLLM++ +EFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQSQFQGHLEGAQSATYYLLMMERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 789  KNRRRTADGYERWMMKAANNGAAAFGEVEKFDDKEAVAXXXXXXXXXXXXXXEAHVSDRG 968
            KNR++TADGYERWMMKAANNG AAFGE  +FD+KE+                E HVSD+G
Sbjct: 181  KNRKKTADGYERWMMKAANNGPAAFGERGRFDEKESNVGGGGKNRKKTDEDEEGHVSDKG 240

Query: 969  XXXXXXXXXRKNRLQLNKKSXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXXXXX 1148
                     R++RL LNKK                          WEH            
Sbjct: 241  EEDEDDEVARRSRLGLNKKGGDDDEEGPRGGDLDQDDDDIEKGDDWEHEEIFTDDDEAVG 300

Query: 1149 XXXXXXXXLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXANGLN--XXXX 1322
                    LAPE+PAPPEIKQ                             +GLN      
Sbjct: 301  NDPEEREDLAPEVPAPPEIKQ-DDEDEDEDNEEGGGLSKSGKELKKLLRTSGLNESDAED 359

Query: 1323 XXXXXXXXXXXXISPALAPKQKEALKEEPTENTSPVKPPTSGSARGTPSTSKSAKGKRKM 1502
                        + P +A K K+A KEEP +N SP KP  +G+ARGT STSK +KGKRK+
Sbjct: 360  DDDDDDVDDEAGVPPVIASKPKDAPKEEPADN-SPSKPAVTGTARGTLSTSKPSKGKRKL 418

Query: 1503 NSEEAKATNSAPLKKVKSEND--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1676
            N EE KA N AP KKVK EN+                                       
Sbjct: 419  N-EETKAANGAPPKKVKIENEPKSTVKDENGSTSKNNTPSKGVPPTPSSKGGSSSPIASG 477

Query: 1677 XVTAEEIKAVLLQSQQVTTQDLVAKFRSRLKSKEDKDAFAAVLRKISRIKRDENNKTSYI 1856
             V+ EEI+AVL+Q   +TTQDLVAKFR+RL+  EDK AFA +L++IS+I++   N +SY+
Sbjct: 478  PVSEEEIRAVLMQKTPLTTQDLVAKFRARLRCPEDKKAFADILKRISKIQK--TNASSYV 535

Query: 1857 ILRN 1868
            ILR+
Sbjct: 536  ILRD 539


>ref|XP_004152016.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Cucumis sativus] gi|449517383|ref|XP_004165725.1|
            PREDICTED: transcription initiation factor IIF subunit
            alpha-like [Cucumis sativus]
          Length = 538

 Score =  493 bits (1269), Expect = e-136
 Identities = 282/543 (51%), Positives = 331/543 (60%), Gaps = 6/543 (1%)
 Frame = +3

Query: 255  MSIDLILKPSCSVCGSSQELYGSTCKHLTLCVNCGKGMAEKRAKCYECGSIITRLIREYN 434
            MS DL+LK SCS CGS+ ELYGS CKH+TLC+ CGK MAE + KCY+CG+ +TRLIREYN
Sbjct: 1    MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60

Query: 435  VRACSSSDKNYFIGRFISGLPNFSRKKS-ENKWSLQKEGLQGRQVTDTLREKYKNKPWLL 611
            VRA +S+DKNYFIGRF+SGLPNFS+K++ ENKWSL KEGLQGRQ++D LREKYKN+PWLL
Sbjct: 61   VRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLL 120

Query: 612  EDETGT-QFHGVLEGAQSATYYLLMLQGREFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 788
            EDETG  QF G LEG+QSATYYLL+LQG+EF AIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 789  KNRRRTADGYERWMMKAANNGAAAFGEVEKFDDKEAVAXXXXXXXXXXXXXXEAHVSDRG 968
            KNR++TADGYERWMMKAA+NG AAFGEVEKFDDKE V               E +VSDRG
Sbjct: 181  KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRG 240

Query: 969  XXXXXXXXXRKNRLQLNKK--SXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXXX 1142
                     RKNRL L+KK                            WEH          
Sbjct: 241  EEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET 300

Query: 1143 XXXXXXXXXXLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXANGLNXXXX 1322
                      LAPE+PAPPEIKQ                              GLN    
Sbjct: 301  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG 360

Query: 1323 XXXXXXXXXXXXI--SPALAPKQKEALKEEPTENTSPVKPPTSGSARGTPSTSKSAKGKR 1496
                           +P L  KQK+ +KEE   N SP KP  SGSA+GTPST+K+AKGKR
Sbjct: 361  EDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAAN-SPSKPTPSGSAKGTPSTAKTAKGKR 419

Query: 1497 KMNSEEAKATNSAPLKKVKSENDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1676
            K N E+ K  +SAP KK+K+E +                                     
Sbjct: 420  K-NGEDVK-PSSAPPKKMKTETE-----SKATDEGVPTSKSTASKGAPASVKTEPSSHSG 472

Query: 1677 XVTAEEIKAVLLQSQQVTTQDLVAKFRSRLKSKEDKDAFAAVLRKISRIKRDENNKTSYI 1856
             VT EEI+AVL Q   VTTQDLVAKF++RL++ EDK+AFA +LR+ISRI++  N   SY+
Sbjct: 473  PVTEEEIRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQK-TNGGPSYV 531

Query: 1857 ILR 1865
            +LR
Sbjct: 532  VLR 534


>gb|EMJ12738.1| hypothetical protein PRUPE_ppa003970mg [Prunus persica]
          Length = 537

 Score =  491 bits (1264), Expect = e-136
 Identities = 275/542 (50%), Positives = 336/542 (61%), Gaps = 4/542 (0%)
 Frame = +3

Query: 255  MSIDLILKPSCSVCGSSQELYGSTCKHLTLCVNCGKGMAEKRAKCYECGSIITRLIREYN 434
            MS DL L+ SCS CGS+ ELYGS CKH+TLC++CGK MAE RAKC++CG+I+TRLIREYN
Sbjct: 1    MSADLTLRSSCSGCGSTSELYGSNCKHMTLCLSCGKTMAENRAKCFDCGAIVTRLIREYN 60

Query: 435  VRACSSSDKNYFIGRFISGLPNFSRKKS-ENKWSLQKEGLQGRQVTDTLREKYKNKPWLL 611
            VRA + +DKNYFIGRF++GLP+FS+KK+ ENKWSL KEGLQGRQ++DTLR+KYKNKPW+L
Sbjct: 61   VRASTVNDKNYFIGRFVTGLPSFSKKKNAENKWSLHKEGLQGRQLSDTLRDKYKNKPWVL 120

Query: 612  EDETG-TQFHGVLEGAQSATYYLLMLQGREFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 788
            EDETG +Q+ G LEGAQ+ATYYLLM QG+EF AIPAGSW+NFNKVAQYKQLTLEEAEEK+
Sbjct: 121  EDETGQSQYQGHLEGAQTATYYLLMRQGKEFSAIPAGSWFNFNKVAQYKQLTLEEAEEKI 180

Query: 789  KNRRRTADGYERWMMKAANNGAAAFGEVEKFDDKEAVAXXXXXXXXXXXXXXEAHVSDRG 968
            KNR++TADGYERWMMKAANNGAAAFGEVE+FD   +V               E +VSD+G
Sbjct: 181  KNRKKTADGYERWMMKAANNGAAAFGEVERFDKDNSVTSGKGRKKAGDDDDGEGNVSDKG 240

Query: 969  XXXXXXXXXRKNRLQLNKKSXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXXXXX 1148
                     RKNRL   K                           WEH            
Sbjct: 241  EEDEEEELARKNRLN-KKGGDDDDDDGARGADADLDDDDVEKGDDWEHEEIFTDDDEAVG 299

Query: 1149 XXXXXXXXLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXA--NGLNXXXX 1322
                    L  E+PAPPEIKQ                               +  +    
Sbjct: 300  NNPEEREDLELEVPAPPEIKQDDEDEDEDDKEGGLSKSGKELKKLLGRTGGLDDSDAEDD 359

Query: 1323 XXXXXXXXXXXXISPALAPKQKEALKEEPTENTSPVKPPTSGSARGTPSTSKSAKGKRKM 1502
                           A APKQK+A KEEP++N SP KP  SGSARGTPST+KSAKGKRK+
Sbjct: 360  DDDDDDMDDDIGFPQAAAPKQKDASKEEPSDN-SPSKPVPSGSARGTPSTAKSAKGKRKL 418

Query: 1503 NSEEAKATNSAPLKKVKSENDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV 1682
            ++++AK +NSAP KKVKSEN+                                      V
Sbjct: 419  SADDAKTSNSAPPKKVKSENE---QKVSTKEEPASASKSSTPSKGTPSVKVEPTSSSGPV 475

Query: 1683 TAEEIKAVLLQSQQVTTQDLVAKFRSRLKSKEDKDAFAAVLRKISRIKRDENNKTSYIIL 1862
            T EEI+ VL+Q   VTTQDLVA+F++RL+ +EDK AFAA+LRKIS+I++  N  +SY++L
Sbjct: 476  TEEEIRTVLVQRTPVTTQDLVARFKARLRLQEDKTAFAAILRKISKIQKTTNG-SSYVVL 534

Query: 1863 RN 1868
            R+
Sbjct: 535  RD 536


>gb|ESW19654.1| hypothetical protein PHAVU_006G143600g [Phaseolus vulgaris]
          Length = 540

 Score =  481 bits (1237), Expect = e-133
 Identities = 279/544 (51%), Positives = 330/544 (60%), Gaps = 6/544 (1%)
 Frame = +3

Query: 255  MSIDLILKPSCSVCGSSQELYGSTCKHLTLCVNCGKGMAEKRAKCYECGSIITRLIREYN 434
            MS DL LK SCS CGS+ +LYGS CKH+TLC++CGK MAE RAKC +CG  +TRLIREYN
Sbjct: 1    MSTDLQLKSSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENRAKCVDCGVTLTRLIREYN 60

Query: 435  VRACSSSDKNYFIGRFISGLPNFSRKKS-ENKWSLQKEGLQGRQVTDTLREKYKNKPWLL 611
            VRA S++DKNYFIGRF++GLP+FS+KKS ENKW+LQKEGL GRQ+TDTLREKYKNKPWLL
Sbjct: 61   VRASSTNDKNYFIGRFMTGLPDFSKKKSAENKWALQKEGLLGRQITDTLREKYKNKPWLL 120

Query: 612  EDETG-TQFHGVLEGAQSATYYLLMLQGREFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 788
            EDETG +Q+ G LEG+QSATYYLLM + +EFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQSQYQGHLEGSQSATYYLLMKERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 789  KNRRRTADGYERWMMKAANNGAAAFGEVEKFDDKEAVAXXXXXXXXXXXXXXEAHVSDRG 968
            KNR++TADGY+RWMMKAANNG AAFG+  KFD+KE+                E HVSD+G
Sbjct: 181  KNRKKTADGYQRWMMKAANNGPAAFGDHGKFDEKES-NTGGGRSRKKTGEEEEGHVSDKG 239

Query: 969  XXXXXXXXXRKNRLQLNKKSXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXXXXX 1148
                     RKNRL L K+                          WEH            
Sbjct: 240  EEDEDDESERKNRLGLYKRPADDDEEGPRGGDHDLEDDDVEKGDDWEHEEIFTDDDEAVG 299

Query: 1149 XXXXXXXXLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXANGLN---XXX 1319
                    LAPE+PAPPEIKQ                            A+GLN      
Sbjct: 300  NDPEEREDLAPEVPAPPEIKQDEEEEDEDNEEGGGLSKSGKELKKLLGKASGLNESDAED 359

Query: 1320 XXXXXXXXXXXXXISPALAPKQKEALKEEPTENTSPVKPPTSGSARGTPSTSKSAKGKRK 1499
                           P +A K K+A KEEP +N SP KP  +G ARGTPS SKS+KGKRK
Sbjct: 360  EDDDDDDMDDEVGNPPVIATKTKDAPKEEPVDN-SPSKPTATGPARGTPS-SKSSKGKRK 417

Query: 1500 MNSEEAKATNSAPLKKVKSEND-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1676
             N EE K TN+A  KKVK EN+                                      
Sbjct: 418  SN-EEVKPTNTATPKKVKQENEPKSSAKDVNGSASKSNAPPKGTPPSSSSKPGSSATASG 476

Query: 1677 XVTAEEIKAVLLQSQQVTTQDLVAKFRSRLKSKEDKDAFAAVLRKISRIKRDENNKTSYI 1856
             V+ EEI+AVL Q   VTTQDLVAKF++RL+S EDK AFA +L++IS+I++  N  +SY+
Sbjct: 477  PVSEEEIRAVLRQKTPVTTQDLVAKFKARLRSSEDKQAFAEILKRISKIQKTANG-SSYV 535

Query: 1857 ILRN 1868
            ILR+
Sbjct: 536  ILRD 539


>ref|XP_006586768.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Glycine max]
          Length = 536

 Score =  479 bits (1234), Expect = e-132
 Identities = 278/543 (51%), Positives = 327/543 (60%), Gaps = 5/543 (0%)
 Frame = +3

Query: 255  MSIDLILKPSCSVCGSSQELYGSTCKHLTLCVNCGKGMAEKRAKCYECGSIITRLIREYN 434
            MS DL LK SCS CGS+ +LYGS CKH+TLC+ CGK MA KRAKC +CG+ +TRLIREYN
Sbjct: 1    MSTDLQLKSSCSGCGSTTDLYGSNCKHMTLCLGCGKTMAAKRAKCVDCGATLTRLIREYN 60

Query: 435  VRACSSSDKNYFIGRFISGLPNFSRKKS-ENKWSLQKEGLQGRQVTDTLREKYKNKPWLL 611
            VRA S +DKNYFIGRFI+GLP+FS+KKS ENKWSLQK+GL GRQ+TDTLREKYKNKPWLL
Sbjct: 61   VRASSPNDKNYFIGRFINGLPDFSKKKSAENKWSLQKDGLHGRQITDTLREKYKNKPWLL 120

Query: 612  EDETG-TQFHGVLEGAQSATYYLLMLQGREFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 788
            EDETG +QF G LEG+QSATYYLLM + +EFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQSQFQGHLEGSQSATYYLLMKERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 789  KNRRRTADGYERWMMKAANNGAAAFGEVEKFDDKEAVAXXXXXXXXXXXXXXEAHVSDRG 968
            KNR++TADGY+RWMMKAANNG AAFGE  KFDD E+                E HVSD+G
Sbjct: 181  KNRKKTADGYQRWMMKAANNGPAAFGEHGKFDDNES-NTGGGRSHKKTDEDDEGHVSDKG 239

Query: 969  XXXXXXXXXRKNRLQLNKKSXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXXXXX 1148
                     RK+RL LNK++                         WEH            
Sbjct: 240  EEDEEEESERKSRLGLNKRAGEDDEEGPRGGDHDLDDDDVEKGDDWEHEEIFTDDDEAVG 299

Query: 1149 XXXXXXXXLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXANGLN---XXX 1319
                    LAPE+PAPPEIKQ                            A+GLN      
Sbjct: 300  NDPEEREDLAPEVPAPPEIKQDEEEEDEDNEEGEGLSKSGKELKKLLGKASGLNESDAED 359

Query: 1320 XXXXXXXXXXXXXISPALAPKQKEALKEEPTENTSPVKPPTSGSARGTPSTSKSAKGKRK 1499
                         + P +A KQK+ALKEEP +N SP KP  +G ARGTPS SKS+KGKRK
Sbjct: 360  DDDDDDDVDDDVGVPPVIATKQKDALKEEPIDN-SPSKPTATGPARGTPS-SKSSKGKRK 417

Query: 1500 MNSEEAKATNSAPLKKVKSENDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1679
            +N EE K +N+A  KK   E                                        
Sbjct: 418  LN-EETKPSNTATPKK---EPKLSAKDVNGSASKSSAPPKGTPPLSSKGGSSTTTTASGP 473

Query: 1680 VTAEEIKAVLLQSQQVTTQDLVAKFRSRLKSKEDKDAFAAVLRKISRIKRDENNKTSYII 1859
            V+ EEI+AVL Q   VTTQDLVAKF++RL+  EDK AFA +L++IS+I++      SY+I
Sbjct: 474  VSEEEIRAVLRQKTPVTTQDLVAKFKARLRCSEDKQAFAEILKRISKIQKTTTG-ASYVI 532

Query: 1860 LRN 1868
            LR+
Sbjct: 533  LRD 535


>ref|XP_002529600.1| tfiif-alpha, putative [Ricinus communis] gi|223530933|gb|EEF32792.1|
            tfiif-alpha, putative [Ricinus communis]
          Length = 584

 Score =  464 bits (1194), Expect = e-128
 Identities = 272/586 (46%), Positives = 325/586 (55%), Gaps = 48/586 (8%)
 Frame = +3

Query: 255  MSIDLILKPSCSVCGSSQELYGSTCKHLTLCVNCGKGMAEKRAKCYECGSIITRLI---- 422
            MS+DL LK SCS CGS+ +LYGS CKH+TLC+NCGK MAE R KC++CG  IT+ +    
Sbjct: 1    MSVDLQLKSSCSECGSTTDLYGSNCKHMTLCLNCGKTMAENRRKCFDCGVTITQRLLGLG 60

Query: 423  ----------------------------------------REYNVRACSSSDKNYFIGRF 482
                                                    +EYNVRA  SSDKNYFIGRF
Sbjct: 61   SLSWAGHQVHVSLPINQFLNAGVDPKEISLPHEFILNWDTKEYNVRASPSSDKNYFIGRF 120

Query: 483  ISGLPNFSRKKS-ENKWSLQKEGLQGRQVTDTLREKYKNKPWLLEDETGT-QFHGVLEGA 656
            ++GLP FS+KK+ ENKWS+ KEGLQGRQ+TD LREK+KNKPWLLEDETG  Q+HG LEG+
Sbjct: 121  VTGLPIFSKKKNAENKWSIHKEGLQGRQLTDALREKFKNKPWLLEDETGQYQYHGHLEGS 180

Query: 657  QSATYYLLMLQGREFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRRTADGYERWMMK 836
            QSATYYLL+LQG+EFVAIPA SWYNFNKVAQYK LTLEEAEEKMKNRR+TADGYERWMMK
Sbjct: 181  QSATYYLLILQGKEFVAIPAASWYNFNKVAQYKMLTLEEAEEKMKNRRKTADGYERWMMK 240

Query: 837  AANNGAAAFGEVEKFDDKEA-VAXXXXXXXXXXXXXXEAHVSDRGXXXXXXXXXRKNRLQ 1013
            AANNG AAFGE+EK DDK+                  E  +SD+G         RKNRL 
Sbjct: 241  AANNGPAAFGEMEKPDDKDVRTTSGRGRRKTAGDDDDEGKISDKGEEDEEEEMSRKNRLG 300

Query: 1014 LNKKSXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXXXXXXXXXXXXXLAPEIPA 1193
            LN++                          WEH                    L PE+PA
Sbjct: 301  LNRQGGGDDDEGPRGGDHDMDDDDVEKGDDWEHEEIFTDDDEAVGNDPEERQDLGPELPA 360

Query: 1194 PPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXANGLNXXXXXXXXXXXXXXXXISPAL 1373
            PPEIKQ                                +                +SP L
Sbjct: 361  PPEIKQDEDDEDEENEEGGLSKSGKELKALLGRSGGLDDTDAEDDDDDDMDEDTGLSPVL 420

Query: 1374 APKQKEA-LKEEPTENTSPVKPPTSGSARGTPSTSKSAKGKRKMNSEEAKATNSAPLKKV 1550
            A KQK+A +KEEP +N SP KP  S SA+G  S SKSAKGKRK N ++ K +N +P KKV
Sbjct: 421  AQKQKDAPIKEEPGDN-SPAKPMHSSSAKGALSASKSAKGKRKTNGDDGKTSNVSPQKKV 479

Query: 1551 KSENDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAEEIKAVLLQSQQVT 1730
            K+EN+                                      VT EEIKAVLLQ+  VT
Sbjct: 480  KTENESKHIVKEENVPTSKSKSSANPKGAAASLRTESTSSTGFVTDEEIKAVLLQNGPVT 539

Query: 1731 TQDLVAKFRSRLKSKEDKDAFAAVLRKISRIKRDENNKTSYIILRN 1868
            TQDLVAKF+SRLK++EDK+AF   L++ISRI++      SY++LR+
Sbjct: 540  TQDLVAKFKSRLKTREDKEAFTHTLKRISRIQKTSGG--SYVVLRD 583


>ref|XP_006857695.1| hypothetical protein AMTR_s00061p00167160 [Amborella trichopoda]
            gi|548861791|gb|ERN19162.1| hypothetical protein
            AMTR_s00061p00167160 [Amborella trichopoda]
          Length = 558

 Score =  462 bits (1190), Expect = e-127
 Identities = 277/549 (50%), Positives = 324/549 (59%), Gaps = 11/549 (2%)
 Frame = +3

Query: 255  MSIDLILKPSCSVCGSSQELYGSTCKHLTLCVNCGKGMAEKRAKCYECGSIITRLIREYN 434
            MS DL+LK SC  CGS+ +LYGS CKHLTLC +CGK MAE R+KCYECG+ ITRLIREYN
Sbjct: 12   MSGDLVLKSSCVGCGSNSDLYGSNCKHLTLCQSCGKTMAETRSKCYECGTPITRLIREYN 71

Query: 435  VRACSSSDKNYFIGRFISGLPNFSRKKSEN-KWSLQKEGLQGRQVTDTLREKYKNKPWLL 611
            VRA  ++DK Y+I RF+ GLP FSRKK+ + KW+LQKEGLQGRQVT++LREK+KNKPWLL
Sbjct: 72   VRANVNTDKTYYISRFVMGLPGFSRKKNGDVKWTLQKEGLQGRQVTESLREKFKNKPWLL 131

Query: 612  EDETGT-QFHGVLEGAQSATYYLLMLQGREFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 788
            EDETG  Q+HG LEGAQSATYYLL  QG+EFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 132  EDETGQHQYHGQLEGAQSATYYLLTNQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 191

Query: 789  KNRRRTADGYERWMMKAANNGAAAFGEVEKFDDK--EAVAXXXXXXXXXXXXXXEAHVSD 962
            KNRR+ A+GYERW+MKAANNGA+AF ++EK D       A              +A  SD
Sbjct: 192  KNRRKNAEGYERWIMKAANNGASAFRDMEKIDGSGGNGGASGGRRRKGSGDEDDDAVRSD 251

Query: 963  RGXXXXXXXXXRKNRLQLNKKS-XXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXX 1139
            R          RKNRL LNKK+                          WEH         
Sbjct: 252  REGEDDDDEEARKNRLGLNKKTFDDEGEEVPRGDDHDFDDDDIEKGDDWEHEEIFTDDDE 311

Query: 1140 XXXXXXXXXXXLAPEIPAPPEIKQ-XXXXXXXXXXXXXXXXXXXXXXXXXXXXANGLNXX 1316
                        APE+PAPPEIKQ                             A GLN  
Sbjct: 312  AVGNDPEEREDFAPEVPAPPEIKQDDEDEDEGNEDEEGGLSKSGRELKKLLGRAGGLNES 371

Query: 1317 XXXXXXXXXXXXXXI--SPALAPKQKEALKEEPTENTSPVKPPTSGSARGTPSTSKSAKG 1490
                          +  S  LAPKQKE +KEEP +N SP K  TSGS RGTPSTSKS K 
Sbjct: 372  DGDDDDDDDDLDDDMGTSSVLAPKQKE-VKEEPVDN-SPTKTATSGSNRGTPSTSKSTKA 429

Query: 1491 KRKMNSEEAKATNSAPLKKVKSEND---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1661
            KRK  S++AK   SAP KK K END                                   
Sbjct: 430  KRKSGSDDAKPAASAPSKKPKIENDSKPATTVKDEPASAQRSNTPVKLPSSSGTKPAGSP 489

Query: 1662 XXXXXXVTAEEIKAVLLQSQQVTTQDLVAKFRSRLKSKEDKDAFAAVLRKISRIKRDENN 1841
                  VT +EI+AVLLQ   VTTQDLV KF++RL++KEDKD+FAAVL+KISRI++  N 
Sbjct: 490  VAAAVPVTEDEIRAVLLQMAPVTTQDLVGKFKARLRTKEDKDSFAAVLKKISRIQK-TNG 548

Query: 1842 KTSYIILRN 1868
              ++++LR+
Sbjct: 549  GANFVVLRD 557


>ref|XP_004486214.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            isoform X1 [Cicer arietinum]
          Length = 538

 Score =  457 bits (1176), Expect = e-125
 Identities = 271/544 (49%), Positives = 325/544 (59%), Gaps = 7/544 (1%)
 Frame = +3

Query: 255  MSIDLILKPSCSVCGSSQELYGSTCKHLTLCVNCGKGMAEKRAKCYECGSIITRLIREYN 434
            M++DL LK  CS C S+ +LYGS CKH+TLC+ CGK MAE RAKCY+CG+ +TRLIREYN
Sbjct: 1    MTMDLQLKSCCSGCRSTTDLYGSNCKHMTLCLTCGKTMAENRAKCYDCGATLTRLIREYN 60

Query: 435  VRACSSSDKNYFIGRFISGLPNFSRKKS-ENKWSLQKEGLQGRQVTDTLREKYKNKPWLL 611
            VRA S++DKNYFIGRF++GLP+FS+KKS ENKW LQK+GLQ R+VTD LREK+KN+PWLL
Sbjct: 61   VRASSANDKNYFIGRFMTGLPDFSKKKSAENKWCLQKDGLQRREVTDALREKFKNRPWLL 120

Query: 612  EDETG-TQFHGVLEGAQSATYYLLMLQGREFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 788
            EDETG +Q+ G LEG+QSATYYLLM + +EFVA PAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQSQYQGHLEGSQSATYYLLMKEKKEFVAXPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 789  KNRRRTADGYERWMMKAANNGAAAFGEVEKFDDKEAVAXXXXXXXXXXXXXXEAHVSDRG 968
            KNR++TADGY+RWMMKAANNG AAFGE  K D+KE+                E  VSD+G
Sbjct: 181  KNRKKTADGYQRWMMKAANNGPAAFGEHGKLDEKES-NTGGGRSRKKTGDDDEGVVSDKG 239

Query: 969  XXXXXXXXXRKNRLQLNKKS--XXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXXX 1142
                     RK+RL LNKKS                           WEH          
Sbjct: 240  EEDEDEEVDRKSRLGLNKKSGYDDDEDEGPKGGDSDIDGDDIEKGDDWEHEEIFTDDDEA 299

Query: 1143 XXXXXXXXXXLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXANGL---NX 1313
                      LAPEIPAPPEIKQ                             +GL   + 
Sbjct: 300  VGNDPEEREDLAPEIPAPPEIKQDDDEEDEDNEEEGGLSKSGKELKKLLGRTSGLDESDA 359

Query: 1314 XXXXXXXXXXXXXXXISPALAPKQKEALKEEPTENTSPVKPPTSGSARGTPSTSKSAKGK 1493
                           + P  A K++   KEEP + TSP KP T+G ARGTP TSKS+KGK
Sbjct: 360  EDDDDDDDDIDDEVGVPPVTAAKKEP--KEEPVD-TSPSKPTTTGPARGTP-TSKSSKGK 415

Query: 1494 RKMNSEEAKATNSAPLKKVKSENDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1673
            RK  SEEAK  N AP KKVK+EN+                                    
Sbjct: 416  RKA-SEEAK-PNIAPTKKVKTENEPKSSGKDVNGSTSKSNAPSKGAPPPPSKAGSSTAAS 473

Query: 1674 XXVTAEEIKAVLLQSQQVTTQDLVAKFRSRLKSKEDKDAFAAVLRKISRIKRDENNKTSY 1853
              VT EEI+ VL+Q   VTTQDLVAKF++RL+  EDK AFA +L++IS+I++  N  +SY
Sbjct: 474  GPVTEEEIRTVLMQKTPVTTQDLVAKFKARLRCSEDKQAFAEILKRISKIQKTTNG-SSY 532

Query: 1854 IILR 1865
            +ILR
Sbjct: 533  VILR 536