BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00008783
         (1997 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004237420.1| PREDICTED: general transcription factor IIH ...   678   0.0  
ref|XP_006363938.1| PREDICTED: general transcription factor IIH ...   675   0.0  
gb|EXB98563.1| General transcription factor IIH subunit 2 [Morus...   662   0.0  
emb|CBI16283.3| unnamed protein product [Vitis vinifera]              661   0.0  
ref|XP_002284994.1| PREDICTED: general transcription factor IIH ...   661   0.0  
ref|XP_006366483.1| PREDICTED: general transcription factor IIH ...   658   0.0  
gb|EMJ06452.1| hypothetical protein PRUPE_ppa006259mg [Prunus pe...   646   0.0  
ref|XP_004309875.1| PREDICTED: TFIIH basal transcription factor ...   642   0.0  
ref|XP_004143721.1| PREDICTED: general transcription factor IIH ...   641   0.0  
gb|EOY33067.1| General transcription factor II H2 isoform 1 [The...   641   0.0  
ref|XP_006489788.1| PREDICTED: general transcription factor IIH ...   632   e-178
ref|XP_006491820.1| PREDICTED: general transcription factor IIH ...   632   e-178
ref|XP_006420615.1| hypothetical protein CICLE_v10005033mg [Citr...   631   e-178
ref|XP_004493385.1| PREDICTED: general transcription factor IIH ...   631   e-178
ref|XP_006428490.1| hypothetical protein CICLE_v10011800mg [Citr...   630   e-178
ref|XP_003554116.1| PREDICTED: general transcription factor IIH ...   630   e-178
ref|XP_003537621.1| PREDICTED: general transcription factor IIH ...   626   e-177
gb|ESW34067.1| hypothetical protein PHAVU_001G121400g [Phaseolus...   624   e-176
ref|XP_003624959.1| General transcription factor IIH subunit [Me...   622   e-175
ref|XP_002331276.1| predicted protein [Populus trichocarpa] gi|5...   609   e-171

>ref|XP_004237420.1| PREDICTED: general transcription factor IIH subunit 2-like [Solanum
            lycopersicum]
          Length = 414

 Score =  678 bits (1749), Expect = 0.0
 Identities = 333/418 (79%), Positives = 358/418 (85%), Gaps = 3/418 (0%)
 Frame = -1

Query: 1793 INGAERRFSKGXXXXXXXXEGTGAGREAWERTYADERSWESLQEDESGLLRPIDNKALYH 1614
            +N  E+RF++            G GREAWERTYADERSWESLQEDESGLLRPIDNK L H
Sbjct: 1    MNTEEKRFNQEEEDEEE----NGRGREAWERTYADERSWESLQEDESGLLRPIDNKTLSH 56

Query: 1613 AQYRRRLRTATSARIQKGLIRYLYIVIDLSRAASEMDYKPSRMAVVAKQVEAFIREFFDQ 1434
            AQYRRRLRTAT+ARIQKGLIRYLYI+ID SRAA+EMDYKPSRM VVA+QVEA+IREFFDQ
Sbjct: 57   AQYRRRLRTATAARIQKGLIRYLYIIIDFSRAAAEMDYKPSRMVVVARQVEAYIREFFDQ 116

Query: 1433 NPLSQIGLVTLKDGVANCLTDLGGSPESHIKALMGKLVCSGDPSIQNGLDLVHDLLNQIP 1254
            NPLSQIGLV LKDGVA+CLTDLGGSPE+HIKALMGKL  SGD S+QNGLDLV DLLNQIP
Sbjct: 117  NPLSQIGLVILKDGVAHCLTDLGGSPEAHIKALMGKLGTSGDASLQNGLDLVCDLLNQIP 176

Query: 1253 SYGHREVLFLYSALSTSDPGDIMETIQKCKLSKIRCSVIGLSAELFVCKYLCQETGGSYS 1074
            SYGHRE L LYSALST DPGDI+ETIQKCK SKIRCSVIGLSAEL++CK+LCQETGG Y 
Sbjct: 177  SYGHREALILYSALSTCDPGDILETIQKCKASKIRCSVIGLSAELYICKHLCQETGGMYF 236

Query: 1073 VALDEPHLKELVLEHXXXXXXXXXXXXANLIKMGFPQRAAEGIISICSCHKEAKFGGGYT 894
            VALDEPHLKELVLEH            ANLIKMGFPQR AEG+ISICSCHKEAK GGGYT
Sbjct: 237  VALDEPHLKELVLEHAPPPPAIAEFAVANLIKMGFPQRTAEGVISICSCHKEAKVGGGYT 296

Query: 893  CPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDDVS---LSYINNQPKDCF 723
            CPRCKAR+CELPTEC ICGLTLVSSPHLARSYHHLFPI PFDDVS   L   +  PK+CF
Sbjct: 297  CPRCKARICELPTECCICGLTLVSSPHLARSYHHLFPIRPFDDVSPSALKDFHKLPKNCF 356

Query: 722  GCQQSLLNPGNIPGPRAACPKCKQQFCLDCDIYIHESLHNCPGCESLRHSKSAINMEE 549
            GCQ SLLNPGN+PGP+ ACP CKQ FCLDCDIYIHESLHNCPGCESLR+SK+  +MEE
Sbjct: 357  GCQLSLLNPGNLPGPQVACPNCKQHFCLDCDIYIHESLHNCPGCESLRNSKTISDMEE 414


>ref|XP_006363938.1| PREDICTED: general transcription factor IIH subunit 2-like isoform X1
            [Solanum tuberosum]
          Length = 414

 Score =  675 bits (1741), Expect = 0.0
 Identities = 333/418 (79%), Positives = 357/418 (85%), Gaps = 3/418 (0%)
 Frame = -1

Query: 1793 INGAERRFSKGXXXXXXXXEGTGAGREAWERTYADERSWESLQEDESGLLRPIDNKALYH 1614
            +N  E+RF++            G GREAWERTYADERSWESLQEDESGLLRPIDN  L H
Sbjct: 1    MNNEEKRFNQEEEDEEE----NGRGREAWERTYADERSWESLQEDESGLLRPIDNTTLSH 56

Query: 1613 AQYRRRLRTATSARIQKGLIRYLYIVIDLSRAASEMDYKPSRMAVVAKQVEAFIREFFDQ 1434
            AQYRRRLRTAT+ARIQKGLIRYLYI+IDLSRAA+EMDYKPSRM VVA+QVEAFIREFFDQ
Sbjct: 57   AQYRRRLRTATAARIQKGLIRYLYIIIDLSRAAAEMDYKPSRMVVVARQVEAFIREFFDQ 116

Query: 1433 NPLSQIGLVTLKDGVANCLTDLGGSPESHIKALMGKLVCSGDPSIQNGLDLVHDLLNQIP 1254
            NPLSQIGLV LKDGVA+CLTDLGGSPE+HIKALMGKL  SGD S+QNGLDLV DLLNQIP
Sbjct: 117  NPLSQIGLVILKDGVAHCLTDLGGSPEAHIKALMGKLGTSGDASLQNGLDLVCDLLNQIP 176

Query: 1253 SYGHREVLFLYSALSTSDPGDIMETIQKCKLSKIRCSVIGLSAELFVCKYLCQETGGSYS 1074
            SYGHRE L LYSALST DPGDI+ETIQK K SKIRCSVIGLSAEL++CK+LCQETGG Y 
Sbjct: 177  SYGHREALILYSALSTCDPGDILETIQKYKASKIRCSVIGLSAELYICKHLCQETGGMYF 236

Query: 1073 VALDEPHLKELVLEHXXXXXXXXXXXXANLIKMGFPQRAAEGIISICSCHKEAKFGGGYT 894
            VALDEPHLKELVLEH            ANLIKMGFPQR AEG+ISICSCHKEAK GGGYT
Sbjct: 237  VALDEPHLKELVLEHAPPPPAIAEFAVANLIKMGFPQRTAEGVISICSCHKEAKVGGGYT 296

Query: 893  CPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDDVS---LSYINNQPKDCF 723
            CPRCKAR+CELPTEC ICGLTLVSSPHLARSYHHLFPI PFDDVS   L   +  PK+CF
Sbjct: 297  CPRCKARICELPTECCICGLTLVSSPHLARSYHHLFPIRPFDDVSPSALKDFHKLPKNCF 356

Query: 722  GCQQSLLNPGNIPGPRAACPKCKQQFCLDCDIYIHESLHNCPGCESLRHSKSAINMEE 549
            GCQ SLLNPGN+PGP+ ACP CKQ FCLDCDIYIHESLHNCPGCESLR+SK+  +MEE
Sbjct: 357  GCQLSLLNPGNLPGPQVACPNCKQHFCLDCDIYIHESLHNCPGCESLRNSKTISDMEE 414


>gb|EXB98563.1| General transcription factor IIH subunit 2 [Morus notabilis]
          Length = 423

 Score =  662 bits (1708), Expect = 0.0
 Identities = 322/420 (76%), Positives = 352/420 (83%), Gaps = 6/420 (1%)
 Frame = -1

Query: 1790 NGAERRFSKGXXXXXXXXE--GTGAGREAWERTYADERSWESLQEDESGLLRPIDNKALY 1617
            NG ERR +          +  G G G EAWERTYADERSWESLQEDESGLLRPIDNK  Y
Sbjct: 4    NGEERRLNGAAEDDDDDEDDDGNGRGLEAWERTYADERSWESLQEDESGLLRPIDNKTFY 63

Query: 1616 HAQYRRRLRTATSARIQKGLIRYLYIVIDLSRAASEMDYKPSRMAVVAKQVEAFIREFFD 1437
            HAQYRRRLR+A++ RIQKGLIRYL++VIDLS+AA+EMD++PSRMAVVAK VEAFIREFFD
Sbjct: 64   HAQYRRRLRSASAVRIQKGLIRYLFLVIDLSKAAAEMDFRPSRMAVVAKHVEAFIREFFD 123

Query: 1436 QNPLSQIGLVTLKDGVANCLTDLGGSPESHIKALMGKLVCSGDPSIQNGLDLVHDLLNQI 1257
            QNPLSQ+GLVT+KDGVA+CLTDLGGSPESH+K+LMGKL CSG+ SIQN LDLVHD LNQI
Sbjct: 124  QNPLSQVGLVTIKDGVAHCLTDLGGSPESHVKSLMGKLECSGESSIQNALDLVHDYLNQI 183

Query: 1256 PSYGHREVLFLYSALSTSDPGDIMETIQKCKLSKIRCSVIGLSAELFVCKYLCQETGGSY 1077
            PSYGHREVL  YSALST DPGDIMETIQKCK SKIRCSVIGLSAE+F+CK+LCQETGGSY
Sbjct: 184  PSYGHREVLIFYSALSTCDPGDIMETIQKCKKSKIRCSVIGLSAEIFICKHLCQETGGSY 243

Query: 1076 SVALDEPHLKELVLEHXXXXXXXXXXXXANLIKMGFPQRAAEGIISICSCHKEAKFGGGY 897
            SVALDE H KEL+LEH            ANLIKMGFPQRAAE  I+ICSCHKEAK GGGY
Sbjct: 244  SVALDESHFKELILEHAPPPPAIAEYAIANLIKMGFPQRAAESSIAICSCHKEAKAGGGY 303

Query: 896  TCPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDDVSLSYINNQ----PKD 729
            TCPRCKARVCELPTEC+ CGLTL+SSPHLARSYHHLFPI PFD++S S +++      K 
Sbjct: 304  TCPRCKARVCELPTECQTCGLTLISSPHLARSYHHLFPIVPFDEMSTSLLSDPHRKLSKA 363

Query: 728  CFGCQQSLLNPGNIPGPRAACPKCKQQFCLDCDIYIHESLHNCPGCESLRHSKSAINMEE 549
            CFGCQQSLL  GN PGPR +CPKCK QFCLDCDIYIHESLHNCPGCES RHSK     EE
Sbjct: 364  CFGCQQSLLGFGNKPGPRVSCPKCKHQFCLDCDIYIHESLHNCPGCESARHSKPVAMSEE 423


>emb|CBI16283.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score =  661 bits (1706), Expect = 0.0
 Identities = 322/403 (79%), Positives = 346/403 (85%), Gaps = 8/403 (1%)
 Frame = -1

Query: 1733 GTGAGREAWERTYADERSWESLQEDESGLLRPIDNKALYHAQYRRRLRT----ATSARIQ 1566
            G G G +AWER YADERSWESLQEDESGLLRPIDNK +YHAQYRRR+R+     T+ARIQ
Sbjct: 92   GNGRGLDAWERAYADERSWESLQEDESGLLRPIDNKTIYHAQYRRRIRSLYSSTTTARIQ 151

Query: 1565 KGLIRYLYIVIDLSRAASEMDYKPSRMAVVAKQVEAFIREFFDQNPLSQIGLVTLKDGVA 1386
            KGLIRYLYIV+DLSRAASEMD+KPSRMAVVAK +EAFIREFFDQNPLSQIGLVT+KDG+A
Sbjct: 152  KGLIRYLYIVVDLSRAASEMDFKPSRMAVVAKHIEAFIREFFDQNPLSQIGLVTIKDGLA 211

Query: 1385 NCLTDLGGSPESHIKALMGKLVCSGDPSIQNGLDLVHDLLNQIPSYGHREVLFLYSALST 1206
             CLTDLGGSP+SH+KALMGKL CSGD S+QN LDLVH  LNQIPSYGHREVL LYSALST
Sbjct: 212  QCLTDLGGSPDSHVKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALST 271

Query: 1205 SDPGDIMETIQKCKLSKIRCSVIGLSAELFVCKYLCQETGGSYSVALDEPHLKELVLEHX 1026
             DPGDIMETIQ+CK SKIRCSVIGLSAE+F+C++LCQETGGSYSVALDE H KEL+LEH 
Sbjct: 272  CDPGDIMETIQECKKSKIRCSVIGLSAEIFICRHLCQETGGSYSVALDESHFKELLLEHA 331

Query: 1025 XXXXXXXXXXXANLIKMGFPQRAAEGIISICSCHKEAKFGGGYTCPRCKARVCELPTECR 846
                       ANLIKMGFPQRAAEG+ISICSCHKEAK GGGYTCPRCKARVCELPTECR
Sbjct: 332  PPPPAIAEFAIANLIKMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARVCELPTECR 391

Query: 845  ICGLTLVSSPHLARSYHHLFPITPFDDVSLSYINN----QPKDCFGCQQSLLNPGNIPGP 678
            ICGLTLVSSPHLARSYHHLFPI PFD+VSLS +NN      + CFGCQ+SLL PGN P  
Sbjct: 392  ICGLTLVSSPHLARSYHHLFPIPPFDEVSLSLLNNPHQRSSRACFGCQESLLIPGNKPTL 451

Query: 677  RAACPKCKQQFCLDCDIYIHESLHNCPGCESLRHSKSAINMEE 549
              ACPKCKQ FCLDCDIYIHESLHNCPGCES RHSK     EE
Sbjct: 452  CVACPKCKQHFCLDCDIYIHESLHNCPGCESFRHSKIVSVTEE 494


>ref|XP_002284994.1| PREDICTED: general transcription factor IIH subunit 2 [Vitis
            vinifera]
          Length = 433

 Score =  661 bits (1706), Expect = 0.0
 Identities = 322/403 (79%), Positives = 346/403 (85%), Gaps = 8/403 (1%)
 Frame = -1

Query: 1733 GTGAGREAWERTYADERSWESLQEDESGLLRPIDNKALYHAQYRRRLRT----ATSARIQ 1566
            G G G +AWER YADERSWESLQEDESGLLRPIDNK +YHAQYRRR+R+     T+ARIQ
Sbjct: 31   GNGRGLDAWERAYADERSWESLQEDESGLLRPIDNKTIYHAQYRRRIRSLYSSTTTARIQ 90

Query: 1565 KGLIRYLYIVIDLSRAASEMDYKPSRMAVVAKQVEAFIREFFDQNPLSQIGLVTLKDGVA 1386
            KGLIRYLYIV+DLSRAASEMD+KPSRMAVVAK +EAFIREFFDQNPLSQIGLVT+KDG+A
Sbjct: 91   KGLIRYLYIVVDLSRAASEMDFKPSRMAVVAKHIEAFIREFFDQNPLSQIGLVTIKDGLA 150

Query: 1385 NCLTDLGGSPESHIKALMGKLVCSGDPSIQNGLDLVHDLLNQIPSYGHREVLFLYSALST 1206
             CLTDLGGSP+SH+KALMGKL CSGD S+QN LDLVH  LNQIPSYGHREVL LYSALST
Sbjct: 151  QCLTDLGGSPDSHVKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALST 210

Query: 1205 SDPGDIMETIQKCKLSKIRCSVIGLSAELFVCKYLCQETGGSYSVALDEPHLKELVLEHX 1026
             DPGDIMETIQ+CK SKIRCSVIGLSAE+F+C++LCQETGGSYSVALDE H KEL+LEH 
Sbjct: 211  CDPGDIMETIQECKKSKIRCSVIGLSAEIFICRHLCQETGGSYSVALDESHFKELLLEHA 270

Query: 1025 XXXXXXXXXXXANLIKMGFPQRAAEGIISICSCHKEAKFGGGYTCPRCKARVCELPTECR 846
                       ANLIKMGFPQRAAEG+ISICSCHKEAK GGGYTCPRCKARVCELPTECR
Sbjct: 271  PPPPAIAEFAIANLIKMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARVCELPTECR 330

Query: 845  ICGLTLVSSPHLARSYHHLFPITPFDDVSLSYINN----QPKDCFGCQQSLLNPGNIPGP 678
            ICGLTLVSSPHLARSYHHLFPI PFD+VSLS +NN      + CFGCQ+SLL PGN P  
Sbjct: 331  ICGLTLVSSPHLARSYHHLFPIPPFDEVSLSLLNNPHQRSSRACFGCQESLLIPGNKPTL 390

Query: 677  RAACPKCKQQFCLDCDIYIHESLHNCPGCESLRHSKSAINMEE 549
              ACPKCKQ FCLDCDIYIHESLHNCPGCES RHSK     EE
Sbjct: 391  CVACPKCKQHFCLDCDIYIHESLHNCPGCESFRHSKIVSVTEE 433


>ref|XP_006366483.1| PREDICTED: general transcription factor IIH subunit 2-like [Solanum
            tuberosum]
          Length = 418

 Score =  658 bits (1697), Expect = 0.0
 Identities = 328/422 (77%), Positives = 353/422 (83%), Gaps = 7/422 (1%)
 Frame = -1

Query: 1793 INGAERRFSKGXXXXXXXXEGTGAGREAWERTYADERSWESLQEDESGLLRPIDNKALYH 1614
            +N  E+RF++            G GREAWERTYADERSWESLQEDESGLLR IDNK L H
Sbjct: 1    MNTEEKRFNQEEEDEEE----NGRGREAWERTYADERSWESLQEDESGLLRLIDNKTLSH 56

Query: 1613 AQYRRRLRTATSARIQKGLIRYLYIVIDLSRAASEMDYKPSRMAVVAKQVEAFIREFFDQ 1434
            AQYRRRLRTAT+ARIQKGLIRYLYI+ID SRAA+EMDYKPSRM VVA+QVEAFIREFFDQ
Sbjct: 57   AQYRRRLRTATAARIQKGLIRYLYIIIDFSRAAAEMDYKPSRMVVVARQVEAFIREFFDQ 116

Query: 1433 NPLSQIGLVTLKDGVANCLTDLGGSPESHIKALMGKLVCSGDPSIQNGLDLVHDLLNQIP 1254
            NPLSQIGLV LKDG A+CLTDLGGSPE+HIK LMGKL  SGD S+QNGLDLV DLLNQIP
Sbjct: 117  NPLSQIGLVILKDGEAHCLTDLGGSPEAHIKELMGKLGTSGDASLQNGLDLVCDLLNQIP 176

Query: 1253 SYGHREVLFLYSALSTSDPGDIMETIQKCKLSKIRCSVIGLSAELFVCKYLCQETGGSYS 1074
            SYGHRE L LYSALST DPGDI+ETIQK K SKIRCSVIGLSAEL++CK+LCQETGG Y 
Sbjct: 177  SYGHREALILYSALSTCDPGDILETIQKYKASKIRCSVIGLSAELYICKHLCQETGGMYF 236

Query: 1073 VALDEPHLKELVLEHXXXXXXXXXXXXANLIK----MGFPQRAAEGIISICSCHKEAKFG 906
            VALDEPHLKELVLEH            ANLI+    MGFPQR AEG+ISICSCHKEAK G
Sbjct: 237  VALDEPHLKELVLEHAPPPPAIAEFAVANLIQMGVTMGFPQRTAEGVISICSCHKEAKVG 296

Query: 905  GGYTCPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDDVS---LSYINNQP 735
            GGYTCPRCKAR+CELPTEC ICGLTLVSSPHLARSYHHLFPI PFDDVS   L   +  P
Sbjct: 297  GGYTCPRCKARICELPTECCICGLTLVSSPHLARSYHHLFPIRPFDDVSPSTLKDFHKLP 356

Query: 734  KDCFGCQQSLLNPGNIPGPRAACPKCKQQFCLDCDIYIHESLHNCPGCESLRHSKSAINM 555
            K+CFGCQ S LNPGN+PGP+ ACP CKQ FCLDCDIYIHESLHNCPGCESLR+SK+  +M
Sbjct: 357  KNCFGCQLSFLNPGNLPGPQVACPNCKQHFCLDCDIYIHESLHNCPGCESLRNSKTISDM 416

Query: 554  EE 549
            EE
Sbjct: 417  EE 418


>gb|EMJ06452.1| hypothetical protein PRUPE_ppa006259mg [Prunus persica]
          Length = 420

 Score =  646 bits (1667), Expect = 0.0
 Identities = 312/411 (75%), Positives = 343/411 (83%), Gaps = 4/411 (0%)
 Frame = -1

Query: 1790 NGAERRFSKGXXXXXXXXEGTGAGREAWERTYADERSWESLQEDESGLLRPIDNKALYHA 1611
            NG +RR +          +    G  AWER YADERSWESLQEDESGLL+PIDN++L HA
Sbjct: 3    NGEQRRLNGEAEEDEEEDDANNGGLAAWERAYADERSWESLQEDESGLLQPIDNQSLKHA 62

Query: 1610 QYRRRLRTATSARIQKGLIRYLYIVIDLSRAASEMDYKPSRMAVVAKQVEAFIREFFDQN 1431
            QYRRRLR A++ARIQKGLIRY+YIVIDLS+AA+EMD++PSRM VVAK VEAFI EFF QN
Sbjct: 63   QYRRRLRAASTARIQKGLIRYVYIVIDLSKAAAEMDFRPSRMGVVAKHVEAFIIEFFYQN 122

Query: 1430 PLSQIGLVTLKDGVANCLTDLGGSPESHIKALMGKLVCSGDPSIQNGLDLVHDLLNQIPS 1251
            PLSQ+GLVT+KDGVA+CLTDLGGSP SH+KALMGKL CSGD S+QN LDLVH  L QIPS
Sbjct: 123  PLSQVGLVTIKDGVAHCLTDLGGSPNSHVKALMGKLECSGDSSLQNALDLVHGYLEQIPS 182

Query: 1250 YGHREVLFLYSALSTSDPGDIMETIQKCKLSKIRCSVIGLSAELFVCKYLCQETGGSYSV 1071
            YGHREVL LYSALST DPGDIMETIQKCK SKIRCSVIGLSAE+F+CK+LCQETGG Y +
Sbjct: 183  YGHREVLILYSALSTCDPGDIMETIQKCKKSKIRCSVIGLSAEIFICKHLCQETGGLYYI 242

Query: 1070 ALDEPHLKELVLEHXXXXXXXXXXXXANLIKMGFPQRAAEGIISICSCHKEAKFGGGYTC 891
            ALDEPHLKEL+LEH            ANLIKMGFPQRAAEG ++ICSCHKEAK GGGYTC
Sbjct: 243  ALDEPHLKELILEHAPPPPAIAEFAIANLIKMGFPQRAAEGSVAICSCHKEAKVGGGYTC 302

Query: 890  PRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDDVSLSYI----NNQPKDCF 723
            PRCKARVC+LPTECRICGLTL+SSPHLARSYHHLFPI PFD+VS S +    N  P+ CF
Sbjct: 303  PRCKARVCDLPTECRICGLTLISSPHLARSYHHLFPIVPFDEVSPSLLIDQQNKFPRACF 362

Query: 722  GCQQSLLNPGNIPGPRAACPKCKQQFCLDCDIYIHESLHNCPGCESLRHSK 570
            GCQQSLLNPGN P  R ACPKCKQ FCLDCDIYIH+SLHNCPGCES  HSK
Sbjct: 363  GCQQSLLNPGNKPSLRVACPKCKQHFCLDCDIYIHDSLHNCPGCESASHSK 413


>ref|XP_004309875.1| PREDICTED: TFIIH basal transcription factor complex p47 subunit-like
            [Fragaria vesca subsp. vesca]
          Length = 420

 Score =  642 bits (1656), Expect = 0.0
 Identities = 313/411 (76%), Positives = 346/411 (84%), Gaps = 4/411 (0%)
 Frame = -1

Query: 1790 NGAERRFSKGXXXXXXXXEGTGAGREAWERTYADERSWESLQEDESGLLRPIDNKALYHA 1611
            NG +RR + G        E    G  AWER YADERSWESLQEDESGLLRPIDN++L+HA
Sbjct: 3    NGDQRRLN-GEIEEDEEDEENNDGLAAWERAYADERSWESLQEDESGLLRPIDNQSLHHA 61

Query: 1610 QYRRRLRTATSARIQKGLIRYLYIVIDLSRAASEMDYKPSRMAVVAKQVEAFIREFFDQN 1431
            QYRRRLR AT+ARIQKGLIRYLYIVIDLS+AASEMD++PSRM VVAK VEAFIRE+F QN
Sbjct: 62   QYRRRLRAATTARIQKGLIRYLYIVIDLSKAASEMDFRPSRMGVVAKHVEAFIREYFYQN 121

Query: 1430 PLSQIGLVTLKDGVANCLTDLGGSPESHIKALMGKLVCSGDPSIQNGLDLVHDLLNQIPS 1251
            PLSQ+GLVT+KDGV++ LTDLGGSPESH+KALMGKL CSGD S+QN LDLV   L+QIPS
Sbjct: 122  PLSQVGLVTIKDGVSHILTDLGGSPESHVKALMGKLECSGDASLQNALDLVQGYLDQIPS 181

Query: 1250 YGHREVLFLYSALSTSDPGDIMETIQKCKLSKIRCSVIGLSAELFVCKYLCQETGGSYSV 1071
            YGHREVL +YSALST DPGDIM TIQKCK SKIRCSVIGLSAE+F+CK+LCQETGGSY +
Sbjct: 182  YGHREVLIMYSALSTCDPGDIMGTIQKCKKSKIRCSVIGLSAEIFICKHLCQETGGSYYI 241

Query: 1070 ALDEPHLKELVLEHXXXXXXXXXXXXANLIKMGFPQRAAEGIISICSCHKEAKFGGGYTC 891
            ALDE HLK+L+LEH            ANLIKMGFPQRAAE  ++ICSCHKEAK G GYTC
Sbjct: 242  ALDESHLKDLILEHAPPPPAIAEFAIANLIKMGFPQRAAESSVAICSCHKEAKVGDGYTC 301

Query: 890  PRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDDVSLSYINNQ----PKDCF 723
            PRCKARVCELPTECRICGLTL+SSPHLARSYHHLFPI PFD+VS+S  ++Q    PK CF
Sbjct: 302  PRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIVPFDEVSMSLYSDQQNKLPKACF 361

Query: 722  GCQQSLLNPGNIPGPRAACPKCKQQFCLDCDIYIHESLHNCPGCESLRHSK 570
            GCQQS+L PGN PG R ACPKCKQ FCLDCDIYIHESLHNCPGC+S RHSK
Sbjct: 362  GCQQSVLGPGNKPGLRVACPKCKQHFCLDCDIYIHESLHNCPGCDSTRHSK 412


>ref|XP_004143721.1| PREDICTED: general transcription factor IIH subunit 2-like [Cucumis
            sativus]
          Length = 423

 Score =  641 bits (1654), Expect = 0.0
 Identities = 310/400 (77%), Positives = 342/400 (85%), Gaps = 10/400 (2%)
 Frame = -1

Query: 1721 GREAWERTYADERSWESLQEDESGLLRPIDNKALYHAQYRRRLRT----ATSARIQKGLI 1554
            G  AWERTYAD+RSWE+LQEDESGLLRPIDNKA+YHAQYRRRLRT    AT+ARIQKGLI
Sbjct: 24   GLAAWERTYADDRSWEALQEDESGLLRPIDNKAIYHAQYRRRLRTLSSLATTARIQKGLI 83

Query: 1553 RYLYIVIDLSRAASEMDYKPSRMAVVAKQVEAFIREFFDQNPLSQIGLVTLKDGVANCLT 1374
            RYLYIVID S+AA+EMD++PSRMAVVAK V+AF+REFFDQNPLSQIGLVT+KDG ANCLT
Sbjct: 84   RYLYIVIDFSKAATEMDFRPSRMAVVAKHVDAFVREFFDQNPLSQIGLVTIKDGFANCLT 143

Query: 1373 DLGGSPESHIKALMGKLVCSGDPSIQNGLDLVHDLLNQIPSYGHREVLFLYSALSTSDPG 1194
            DLGGSPESH+KALMGKL CSGD S+QNGL+LVH  LNQIPSYGHREVL LYSAL++ DPG
Sbjct: 144  DLGGSPESHVKALMGKLECSGDASLQNGLELVHSYLNQIPSYGHREVLVLYSALNSCDPG 203

Query: 1193 DIMETIQKCKLSKIRCSVIGLSAELFVCKYLCQETGGSYSVALDEPHLKELVLEHXXXXX 1014
            DIMET+QKCK SKIRCSVIGL+AE+F+C++LCQETGGSYSVALDE H KEL+LEH     
Sbjct: 204  DIMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETGGSYSVALDESHFKELLLEHAPPPP 263

Query: 1013 XXXXXXXANLIKMGFPQRAAEGIISICSCHKEAKFGGGYTCPRCKARVCELPTECRICGL 834
                    NLIKMGFPQRAAE  I+ICSCHKEAK GGGYTCPRCKARVCELPTECRICGL
Sbjct: 264  AIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVGGGYTCPRCKARVCELPTECRICGL 323

Query: 833  TLVSSPHLARSYHHLFPITPFDDVSLSYINNQ----PKDCFGCQQSLLNP--GNIPGPRA 672
            TL+SSPHLARSYHHLFPI PFD+VS    ++     PK CFGCQ+SL+NP  GN P  R 
Sbjct: 324  TLISSPHLARSYHHLFPIIPFDEVSDKVFHDPRHQLPKVCFGCQESLMNPSTGNSPSIRV 383

Query: 671  ACPKCKQQFCLDCDIYIHESLHNCPGCESLRHSKSAINME 552
            +CPKCKQ FCLDCDIYIHESLHNCPGCES R  K A + E
Sbjct: 384  SCPKCKQHFCLDCDIYIHESLHNCPGCESFRRPKLATSDE 423


>gb|EOY33067.1| General transcription factor II H2 isoform 1 [Theobroma cacao]
            gi|508785812|gb|EOY33068.1| General transcription factor
            II H2 isoform 1 [Theobroma cacao]
            gi|508785813|gb|EOY33069.1| General transcription factor
            II H2 isoform 1 [Theobroma cacao]
          Length = 420

 Score =  641 bits (1653), Expect = 0.0
 Identities = 316/416 (75%), Positives = 343/416 (82%), Gaps = 8/416 (1%)
 Frame = -1

Query: 1790 NGAERRFSKGXXXXXXXXEGTGAGREAWERTYADERSWESLQEDESGLLRPIDNKALYHA 1611
            NG  RR + G           G   +AWERTY DERSWESLQEDESGLLRPIDNKALYH+
Sbjct: 3    NGGARRMNGGGEEDDDEDYVNG-DLDAWERTYTDERSWESLQEDESGLLRPIDNKALYHS 61

Query: 1610 QYRRRLR----TATSARIQKGLIRYLYIVIDLSRAASEMDYKPSRMAVVAKQVEAFIREF 1443
            QYRRRLR    TAT+ARIQKGLIRYLY+VIDLSRAASE D++PSR+ V+AK VEAFIREF
Sbjct: 62   QYRRRLRSLSSTATAARIQKGLIRYLYLVIDLSRAASETDFRPSRIVVIAKHVEAFIREF 121

Query: 1442 FDQNPLSQIGLVTLKDGVANCLTDLGGSPESHIKALMGKLVCSGDPSIQNGLDLVHDLLN 1263
            FDQNPLSQ+GL+T+KDGVA CLTDLGGSPESHIKALM KL CSGD S+QN LDLV   LN
Sbjct: 122  FDQNPLSQVGLLTIKDGVAQCLTDLGGSPESHIKALMNKLECSGDSSLQNALDLVDGYLN 181

Query: 1262 QIPSYGHREVLFLYSALSTSDPGDIMETIQKCKLSKIRCSVIGLSAELFVCKYLCQETGG 1083
            QIPSYGHREVL LY+ALST DPGDIMETIQKCK SKIRCSVIGL+AE+F+CK+LCQETGG
Sbjct: 182  QIPSYGHREVLILYAALSTCDPGDIMETIQKCKKSKIRCSVIGLAAEMFICKHLCQETGG 241

Query: 1082 SYSVALDEPHLKELVLEHXXXXXXXXXXXXANLIKMGFPQRAAEGIISICSCHKEAKFGG 903
            +YSVALDE H KEL+LEH            ANLIKMGFPQRAAEG ISICSCHKEAK G 
Sbjct: 242  TYSVALDESHFKELILEHAPPPPAIAEFATANLIKMGFPQRAAEGSISICSCHKEAKVGA 301

Query: 902  GYTCPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDDVSLSYINNQ----P 735
            GYTCPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPI PFD+V    +N+      
Sbjct: 302  GYTCPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPIAPFDEVPPFSLNDPNHKLQ 361

Query: 734  KDCFGCQQSLLNPGNIPGPRAACPKCKQQFCLDCDIYIHESLHNCPGCESLRHSKS 567
            ++CFGCQQSLLNPGN PG    CPKCK  FCLDCDIYIHESLHNCPGC+S RHSK+
Sbjct: 362  RNCFGCQQSLLNPGNKPGLLVVCPKCKGYFCLDCDIYIHESLHNCPGCDSFRHSKA 417


>ref|XP_006489788.1| PREDICTED: general transcription factor IIH subunit 2-like isoform X1
            [Citrus sinensis]
          Length = 424

 Score =  632 bits (1631), Expect = e-178
 Identities = 313/398 (78%), Positives = 336/398 (84%), Gaps = 8/398 (2%)
 Frame = -1

Query: 1721 GREAWERTYADERSWESLQEDESGLLRPIDNKALYHAQYRRRLR----TATSARIQKGLI 1554
            G EAWER+YAD+RSWE+LQEDESG LRPIDN A+YHAQYRRRLR    TA +ARIQKGLI
Sbjct: 26   GLEAWERSYADDRSWEALQEDESGFLRPIDNSAIYHAQYRRRLRGRSLTAATARIQKGLI 85

Query: 1553 RYLYIVIDLSRAASEMDYKPSRMAVVAKQVEAFIREFFDQNPLSQIGLVTLKDGVANCLT 1374
            RYLYIVIDLSRAA+EMD++PSRMAVVAKQVEAF+REFF QNPLSQIGLVT+KDGVANCLT
Sbjct: 86   RYLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFYQNPLSQIGLVTVKDGVANCLT 145

Query: 1373 DLGGSPESHIKALMGKLVCSGDPSIQNGLDLVHDLLNQIPSYGHREVLFLYSALSTSDPG 1194
            DLGGSPESHIKALMGKL CSGD SIQN LDLVH LLNQIPSYGHREVL LYSALST DPG
Sbjct: 146  DLGGSPESHIKALMGKLGCSGDSSIQNALDLVHGLLNQIPSYGHREVLILYSALSTCDPG 205

Query: 1193 DIMETIQKCKLSKIRCSVIGLSAELFVCKYLCQETGGSYSVALDEPHLKELVLEHXXXXX 1014
            DIMETIQKCK SKIRCSVIGLSAE+F+CK+LCQETGG+YSVALDE H KEL+LEH     
Sbjct: 206  DIMETIQKCKESKIRCSVIGLSAEMFICKHLCQETGGTYSVALDESHSKELILEHAPPPP 265

Query: 1013 XXXXXXXANLIKMGFPQRAAEGIISICSCHKEAKFGGGYTCPRCKARVCELPTECRICGL 834
                   A+LIKMGFPQRA EG ISICSCHKE K G GYTCPRCKARVCELPTECRICGL
Sbjct: 266  AIAEFAIASLIKMGFPQRAGEGSISICSCHKEVKVGVGYTCPRCKARVCELPTECRICGL 325

Query: 833  TLVSSPHLARSYHHLFPITPFDDVSLSYINN----QPKDCFGCQQSLLNPGNIPGPRAAC 666
             LVSSPHLARSYHHLFPI PFD+ + S +N+        CFGCQQSLL  GN  G   AC
Sbjct: 326  QLVSSPHLARSYHHLFPIAPFDEATPSRLNDLHNISRSTCFGCQQSLLASGNKAGLCVAC 385

Query: 665  PKCKQQFCLDCDIYIHESLHNCPGCESLRHSKSAINME 552
            PKCK+ FCL+CDIYIHESLHNCPGCESLR S   +  E
Sbjct: 386  PKCKKHFCLECDIYIHESLHNCPGCESLRQSNPVVANE 423


>ref|XP_006491820.1| PREDICTED: general transcription factor IIH subunit 2-like isoform X1
            [Citrus sinensis] gi|568877611|ref|XP_006491821.1|
            PREDICTED: general transcription factor IIH subunit
            2-like isoform X2 [Citrus sinensis]
            gi|568877613|ref|XP_006491822.1| PREDICTED: general
            transcription factor IIH subunit 2-like isoform X3
            [Citrus sinensis] gi|568877615|ref|XP_006491823.1|
            PREDICTED: general transcription factor IIH subunit
            2-like isoform X4 [Citrus sinensis]
          Length = 425

 Score =  632 bits (1630), Expect = e-178
 Identities = 309/398 (77%), Positives = 336/398 (84%), Gaps = 8/398 (2%)
 Frame = -1

Query: 1721 GREAWERTYADERSWESLQEDESGLLRPIDNKALYHAQYRRRLR----TATSARIQKGLI 1554
            G EAWER+YAD+RSWE+LQEDESG LRPIDN A YHAQYRRRLR     AT+ARIQKGLI
Sbjct: 27   GLEAWERSYADDRSWEALQEDESGFLRPIDNSAFYHAQYRRRLRDRSLVATTARIQKGLI 86

Query: 1553 RYLYIVIDLSRAASEMDYKPSRMAVVAKQVEAFIREFFDQNPLSQIGLVTLKDGVANCLT 1374
            RYLYIVIDLSRAA+EMD++PSRMAVVAKQVEAF+REFFDQNPLSQIGLVT+KDGVANCLT
Sbjct: 87   RYLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLT 146

Query: 1373 DLGGSPESHIKALMGKLVCSGDPSIQNGLDLVHDLLNQIPSYGHREVLFLYSALSTSDPG 1194
            DLGGSPE+HIK LMGKL CSGD S+QN LDLV  LL+QIPSYGHREVL LYSALST DPG
Sbjct: 147  DLGGSPEAHIKVLMGKLGCSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPG 206

Query: 1193 DIMETIQKCKLSKIRCSVIGLSAELFVCKYLCQETGGSYSVALDEPHLKELVLEHXXXXX 1014
            DIMETIQKCK SKIRCSVIGLSAE+F+CK+LCQ+TGGSYSVALDE H KEL++EH     
Sbjct: 207  DIMETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGGSYSVALDESHFKELIMEHAPPPP 266

Query: 1013 XXXXXXXANLIKMGFPQRAAEGIISICSCHKEAKFGGGYTCPRCKARVCELPTECRICGL 834
                   ANLIKMGFPQRA EG ISICSCHKE K G GYTCPRCKARVCELPT+C ICGL
Sbjct: 267  AIAEFAIANLIKMGFPQRAGEGSISICSCHKEVKVGVGYTCPRCKARVCELPTDCHICGL 326

Query: 833  TLVSSPHLARSYHHLFPITPFDDVSLSYINN----QPKDCFGCQQSLLNPGNIPGPRAAC 666
             LVSSPHLARSYHHLFPI PFD+V+   +N+        CFGCQQSLL+ GN PG   AC
Sbjct: 327  QLVSSPHLARSYHHLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGNKPGLYVAC 386

Query: 665  PKCKQQFCLDCDIYIHESLHNCPGCESLRHSKSAINME 552
            PKCK+ FCL+CDIYIHESLHNCPGCESLRHS   +  E
Sbjct: 387  PKCKKHFCLECDIYIHESLHNCPGCESLRHSNPIVANE 424


>ref|XP_006420615.1| hypothetical protein CICLE_v10005033mg [Citrus clementina]
            gi|557522488|gb|ESR33855.1| hypothetical protein
            CICLE_v10005033mg [Citrus clementina]
          Length = 424

 Score =  631 bits (1627), Expect = e-178
 Identities = 311/398 (78%), Positives = 334/398 (83%), Gaps = 8/398 (2%)
 Frame = -1

Query: 1721 GREAWERTYADERSWESLQEDESGLLRPIDNKALYHAQYRRRLR----TATSARIQKGLI 1554
            G EAWER+YAD+RSWE+LQEDESG LRPIDN A+YHAQYRRRLR    T  +ARIQKGLI
Sbjct: 26   GLEAWERSYADDRSWEALQEDESGFLRPIDNSAIYHAQYRRRLRGRSLTVATARIQKGLI 85

Query: 1553 RYLYIVIDLSRAASEMDYKPSRMAVVAKQVEAFIREFFDQNPLSQIGLVTLKDGVANCLT 1374
            RYLYIVIDLSRAA+EMD++PSRM VVAKQVEAF+REFFDQNPLSQIGLVT+KDGVANCLT
Sbjct: 86   RYLYIVIDLSRAAAEMDFRPSRMVVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLT 145

Query: 1373 DLGGSPESHIKALMGKLVCSGDPSIQNGLDLVHDLLNQIPSYGHREVLFLYSALSTSDPG 1194
            DLGGSPESHIKALMGKL CSGD SIQN LDLVH LLNQIPSYGHREVL LYSALST DPG
Sbjct: 146  DLGGSPESHIKALMGKLGCSGDSSIQNALDLVHGLLNQIPSYGHREVLILYSALSTCDPG 205

Query: 1193 DIMETIQKCKLSKIRCSVIGLSAELFVCKYLCQETGGSYSVALDEPHLKELVLEHXXXXX 1014
            DIMETIQKCK SKIRCSVIGLSAE+F+CK+LCQETGG+YSVALDE H KEL+LEH     
Sbjct: 206  DIMETIQKCKESKIRCSVIGLSAEMFICKHLCQETGGTYSVALDESHFKELILEHAPPPP 265

Query: 1013 XXXXXXXANLIKMGFPQRAAEGIISICSCHKEAKFGGGYTCPRCKARVCELPTECRICGL 834
                   A+LIKMGFPQRA EG ISICSCHKE K G GYTCPRCKARVCELPTEC ICGL
Sbjct: 266  AIAEFAIASLIKMGFPQRAGEGSISICSCHKEVKIGVGYTCPRCKARVCELPTECCICGL 325

Query: 833  TLVSSPHLARSYHHLFPITPFDDVSLSYINN----QPKDCFGCQQSLLNPGNIPGPRAAC 666
             LVSSPHLARSYHHLFPI PFD+ + S +N+        CFGCQQSLL  GN  G   AC
Sbjct: 326  QLVSSPHLARSYHHLFPIAPFDEATPSRLNDLHNISRSTCFGCQQSLLASGNKAGLCVAC 385

Query: 665  PKCKQQFCLDCDIYIHESLHNCPGCESLRHSKSAINME 552
            PKCK+ FCL+CDIYIHESLHNCPGCESLR S   +  E
Sbjct: 386  PKCKKHFCLECDIYIHESLHNCPGCESLRQSNPVVANE 423


>ref|XP_004493385.1| PREDICTED: general transcription factor IIH subunit 2-like [Cicer
            arietinum]
          Length = 422

 Score =  631 bits (1627), Expect = e-178
 Identities = 306/395 (77%), Positives = 336/395 (85%), Gaps = 8/395 (2%)
 Frame = -1

Query: 1727 GAGREAWERTYADERSWESLQEDESGLLRPIDNKALYHAQYRRRLR----TATSARIQKG 1560
            G G EAWER Y ++RSWESLQEDESGLLRPID  A++HAQYRRRLR    TA +ARIQKG
Sbjct: 24   GDGLEAWERAYTEDRSWESLQEDESGLLRPIDTTAIHHAQYRRRLRALAATAATARIQKG 83

Query: 1559 LIRYLYIVIDLSRAASEMDYKPSRMAVVAKQVEAFIREFFDQNPLSQIGLVTLKDGVANC 1380
            LIRY+YIV+DLS+AASE D++PSRMAV+AKQVEAFIREFFDQNPLS +GLVT KDGVA  
Sbjct: 84   LIRYMYIVVDLSKAASERDFRPSRMAVIAKQVEAFIREFFDQNPLSHVGLVTTKDGVAQS 143

Query: 1379 LTDLGGSPESHIKALMGKLVCSGDPSIQNGLDLVHDLLNQIPSYGHREVLFLYSALSTSD 1200
            LTDLGGSPESHIKALMGKL CSGD S+QN LDLVHD LNQIPSYGHREVL LYSALST D
Sbjct: 144  LTDLGGSPESHIKALMGKLECSGDASLQNALDLVHDNLNQIPSYGHREVLILYSALSTCD 203

Query: 1199 PGDIMETIQKCKLSKIRCSVIGLSAELFVCKYLCQETGGSYSVALDEPHLKELVLEHXXX 1020
            PGD+METIQKCK SKIRCSVIGL+AE+F+CK+LCQETGG+YSVALDE H KEL+LEH   
Sbjct: 204  PGDLMETIQKCKKSKIRCSVIGLAAEMFICKHLCQETGGTYSVALDESHFKELILEHAPP 263

Query: 1019 XXXXXXXXXANLIKMGFPQRAAEGIISICSCHKEAKFGGGYTCPRCKARVCELPTECRIC 840
                     ANLIKMGFPQRAAEG ++IC+CH+EAK GGGYTCPRCK RVCELPTECRIC
Sbjct: 264  PPAIAEYATANLIKMGFPQRAAEGSVAICTCHEEAKTGGGYTCPRCKVRVCELPTECRIC 323

Query: 839  GLTLVSSPHLARSYHHLFPITPFDDVSLSYIN----NQPKDCFGCQQSLLNPGNIPGPRA 672
            GLTL+SSPHLARSYHHLFPI PF ++S S  N    N P  CFGCQ+SLL+ GN P    
Sbjct: 324  GLTLISSPHLARSYHHLFPIVPFVEISPSSQNDPSHNFPNICFGCQESLLSHGNKPELSV 383

Query: 671  ACPKCKQQFCLDCDIYIHESLHNCPGCESLRHSKS 567
            +CPKCKQQFCLDCDIYIHESLHNCPGCES RHSKS
Sbjct: 384  SCPKCKQQFCLDCDIYIHESLHNCPGCESFRHSKS 418


>ref|XP_006428490.1| hypothetical protein CICLE_v10011800mg [Citrus clementina]
            gi|567871805|ref|XP_006428492.1| hypothetical protein
            CICLE_v10011800mg [Citrus clementina]
            gi|557530547|gb|ESR41730.1| hypothetical protein
            CICLE_v10011800mg [Citrus clementina]
            gi|557530549|gb|ESR41732.1| hypothetical protein
            CICLE_v10011800mg [Citrus clementina]
          Length = 425

 Score =  630 bits (1625), Expect = e-178
 Identities = 308/398 (77%), Positives = 336/398 (84%), Gaps = 8/398 (2%)
 Frame = -1

Query: 1721 GREAWERTYADERSWESLQEDESGLLRPIDNKALYHAQYRRRLR----TATSARIQKGLI 1554
            G EAWER+YAD+RSWE+LQEDESG LRPIDN A YHAQYRRRLR     AT+ARIQKGLI
Sbjct: 27   GLEAWERSYADDRSWEALQEDESGFLRPIDNSAFYHAQYRRRLRDRSLVATTARIQKGLI 86

Query: 1553 RYLYIVIDLSRAASEMDYKPSRMAVVAKQVEAFIREFFDQNPLSQIGLVTLKDGVANCLT 1374
            RYLYIVIDLSRAA+EMD++PSRMAVVAK+VEAF+REFFDQNPLSQIGLVT+KDGVANCLT
Sbjct: 87   RYLYIVIDLSRAAAEMDFRPSRMAVVAKRVEAFVREFFDQNPLSQIGLVTVKDGVANCLT 146

Query: 1373 DLGGSPESHIKALMGKLVCSGDPSIQNGLDLVHDLLNQIPSYGHREVLFLYSALSTSDPG 1194
            DLGGSPE+HIK LMGKL CSGD S+QN LDLV  LL+QIPSYGHREVL LYSALST DPG
Sbjct: 147  DLGGSPEAHIKVLMGKLGCSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPG 206

Query: 1193 DIMETIQKCKLSKIRCSVIGLSAELFVCKYLCQETGGSYSVALDEPHLKELVLEHXXXXX 1014
            DIMETIQKCK SKIRCSVIGLSAE+F+CK+LCQ+TGGSYSVALDE H KEL++EH     
Sbjct: 207  DIMETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGGSYSVALDESHFKELIMEHAPPPP 266

Query: 1013 XXXXXXXANLIKMGFPQRAAEGIISICSCHKEAKFGGGYTCPRCKARVCELPTECRICGL 834
                   ANLIKMGFPQRA EG ISICSCHKE K G GYTCPRCKARVCELPT+C ICGL
Sbjct: 267  AIAEFAIANLIKMGFPQRAGEGSISICSCHKEVKVGVGYTCPRCKARVCELPTDCHICGL 326

Query: 833  TLVSSPHLARSYHHLFPITPFDDVSLSYINN----QPKDCFGCQQSLLNPGNIPGPRAAC 666
             LVSSPHLARSYHHLFPI PFD+V+   +N+        CFGCQQSLL+ GN PG   AC
Sbjct: 327  QLVSSPHLARSYHHLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGNKPGLCVAC 386

Query: 665  PKCKQQFCLDCDIYIHESLHNCPGCESLRHSKSAINME 552
            PKCK+ FCL+CDIYIHESLHNCPGCESLRHS   +  E
Sbjct: 387  PKCKKHFCLECDIYIHESLHNCPGCESLRHSNPIVANE 424


>ref|XP_003554116.1| PREDICTED: general transcription factor IIH subunit 2 [Glycine max]
          Length = 420

 Score =  630 bits (1625), Expect = e-178
 Identities = 302/395 (76%), Positives = 338/395 (85%), Gaps = 8/395 (2%)
 Frame = -1

Query: 1727 GAGREAWERTYADERSWESLQEDESGLLRPIDNKALYHAQYRRRLRT----ATSARIQKG 1560
            G G EAWERTYA++RSWE+LQEDESGLLRPID  A+YHAQYRRRLRT    A +ARIQKG
Sbjct: 21   GGGLEAWERTYAEDRSWEALQEDESGLLRPIDTTAIYHAQYRRRLRTLAATAATARIQKG 80

Query: 1559 LIRYLYIVIDLSRAASEMDYKPSRMAVVAKQVEAFIREFFDQNPLSQIGLVTLKDGVANC 1380
            LIRYLYIV+DLS+AASE D++PSRMAV+ KQVEAFIREFFDQNPLS +GLVT+KDG+A+C
Sbjct: 81   LIRYLYIVVDLSKAASERDFRPSRMAVMGKQVEAFIREFFDQNPLSHVGLVTIKDGIAHC 140

Query: 1379 LTDLGGSPESHIKALMGKLVCSGDPSIQNGLDLVHDLLNQIPSYGHREVLFLYSALSTSD 1200
            +T+LGGSPESHIKALMGKL CSGD S+QN L+LV   LNQIPSYGHREVL LYSALST D
Sbjct: 141  ITELGGSPESHIKALMGKLECSGDASLQNALELVLGYLNQIPSYGHREVLILYSALSTCD 200

Query: 1199 PGDIMETIQKCKLSKIRCSVIGLSAELFVCKYLCQETGGSYSVALDEPHLKELVLEHXXX 1020
            PGD+METIQKCK SKIRCSVIGL+AE+FVCK+LCQETGG+YSVALDE H KEL+LEH   
Sbjct: 201  PGDLMETIQKCKKSKIRCSVIGLAAEMFVCKHLCQETGGTYSVALDESHFKELILEHAPP 260

Query: 1019 XXXXXXXXXANLIKMGFPQRAAEGIISICSCHKEAKFGGGYTCPRCKARVCELPTECRIC 840
                     ANLIKMGFPQR+AEG ++IC+CH+EAK GGGYTCPRCK RVCELPTECR+C
Sbjct: 261  PPAIAEYATANLIKMGFPQRSAEGSVAICTCHEEAKTGGGYTCPRCKVRVCELPTECRVC 320

Query: 839  GLTLVSSPHLARSYHHLFPITPFDDVSLSYINNQ----PKDCFGCQQSLLNPGNIPGPRA 672
            GLTL+SSPHLARSYHHLFPI  FD+V+ S  N+     P  CFGCQQSLL+ GN PG   
Sbjct: 321  GLTLISSPHLARSYHHLFPIVMFDEVTPSSQNDSNHSFPNTCFGCQQSLLSQGNKPGLSV 380

Query: 671  ACPKCKQQFCLDCDIYIHESLHNCPGCESLRHSKS 567
             CPKCKQQFCLDCDIY+HESLHNCPGCES RHSKS
Sbjct: 381  ICPKCKQQFCLDCDIYVHESLHNCPGCESSRHSKS 415


>ref|XP_003537621.1| PREDICTED: general transcription factor IIH subunit 2-like isoform X1
            [Glycine max] gi|571487648|ref|XP_006590708.1| PREDICTED:
            general transcription factor IIH subunit 2-like isoform
            X2 [Glycine max] gi|571487650|ref|XP_006590709.1|
            PREDICTED: general transcription factor IIH subunit
            2-like isoform X3 [Glycine max]
            gi|571487652|ref|XP_006590710.1| PREDICTED: general
            transcription factor IIH subunit 2-like isoform X4
            [Glycine max] gi|571487654|ref|XP_006590711.1| PREDICTED:
            general transcription factor IIH subunit 2-like isoform
            X5 [Glycine max]
          Length = 419

 Score =  626 bits (1615), Expect = e-177
 Identities = 299/394 (75%), Positives = 337/394 (85%), Gaps = 7/394 (1%)
 Frame = -1

Query: 1727 GAGREAWERTYADERSWESLQEDESGLLRPIDNKALYHAQYRRRLRT----ATSARIQKG 1560
            G G EAWERTYA++RSWE+LQEDESGLLRPID  A+YHAQYRRRLRT    A +ARIQKG
Sbjct: 21   GGGLEAWERTYAEDRSWEALQEDESGLLRPIDTTAIYHAQYRRRLRTLAATAATARIQKG 80

Query: 1559 LIRYLYIVIDLSRAASEMDYKPSRMAVVAKQVEAFIREFFDQNPLSQIGLVTLKDGVANC 1380
            LIRYLYIV+DLS+AASE D++PSRM V+ KQVEAFIREFFDQNPLS +GLVT+KDG+A+C
Sbjct: 81   LIRYLYIVVDLSKAASERDFRPSRMVVMGKQVEAFIREFFDQNPLSHVGLVTIKDGIAHC 140

Query: 1379 LTDLGGSPESHIKALMGKLVCSGDPSIQNGLDLVHDLLNQIPSYGHREVLFLYSALSTSD 1200
            +T+LGGSPESHIKALMGKL CSGD S+QN L+LV   LNQIPSYGHREVL LYSALST D
Sbjct: 141  ITELGGSPESHIKALMGKLECSGDASLQNALELVLGYLNQIPSYGHREVLILYSALSTCD 200

Query: 1199 PGDIMETIQKCKLSKIRCSVIGLSAELFVCKYLCQETGGSYSVALDEPHLKELVLEHXXX 1020
            PGD+METIQKCK SKIRCSVIGL+AE+FVCK+LC+ETGG+YSVALDE H KEL+LEH   
Sbjct: 201  PGDLMETIQKCKKSKIRCSVIGLAAEMFVCKHLCEETGGTYSVALDESHFKELILEHAPP 260

Query: 1019 XXXXXXXXXANLIKMGFPQRAAEGIISICSCHKEAKFGGGYTCPRCKARVCELPTECRIC 840
                     ANLIKMGFPQR+AEG ++IC+CH+EAK GGGYTCPRCK RVCELPTECR+C
Sbjct: 261  PPAIAEYSTANLIKMGFPQRSAEGSVAICTCHEEAKTGGGYTCPRCKVRVCELPTECRVC 320

Query: 839  GLTLVSSPHLARSYHHLFPITPFDDVSLSYINNQ---PKDCFGCQQSLLNPGNIPGPRAA 669
            GLTL+SSPHLARSYHHLFPI  FD+V+ S  ++    P  CFGCQQSLL+ GN PG    
Sbjct: 321  GLTLISSPHLARSYHHLFPIVMFDEVTPSQKDSSRSFPNTCFGCQQSLLSQGNKPGLSVI 380

Query: 668  CPKCKQQFCLDCDIYIHESLHNCPGCESLRHSKS 567
            CPKCKQQFCLDCDIY+HESLHNCPGCES RHSKS
Sbjct: 381  CPKCKQQFCLDCDIYVHESLHNCPGCESSRHSKS 414


>gb|ESW34067.1| hypothetical protein PHAVU_001G121400g [Phaseolus vulgaris]
          Length = 420

 Score =  624 bits (1609), Expect = e-176
 Identities = 300/395 (75%), Positives = 333/395 (84%), Gaps = 8/395 (2%)
 Frame = -1

Query: 1727 GAGREAWERTYADERSWESLQEDESGLLRPIDNKALYHAQYRRRLRT----ATSARIQKG 1560
            GA  EAWERTYA++RSWE+LQEDESGLLRPID  A+YHAQYRRRLRT    A +ARIQKG
Sbjct: 21   GADLEAWERTYAEDRSWEALQEDESGLLRPIDTTAIYHAQYRRRLRTLAATAATARIQKG 80

Query: 1559 LIRYLYIVIDLSRAASEMDYKPSRMAVVAKQVEAFIREFFDQNPLSQIGLVTLKDGVANC 1380
            LIRYLYIV+DLS+AASE D++PSRMAV+ KQVE FIREFFDQNPLS +GLVT+KDG+ANC
Sbjct: 81   LIRYLYIVVDLSKAASERDFRPSRMAVIGKQVEVFIREFFDQNPLSHVGLVTIKDGIANC 140

Query: 1379 LTDLGGSPESHIKALMGKLVCSGDPSIQNGLDLVHDLLNQIPSYGHREVLFLYSALSTSD 1200
            +T+LGGSPESHI A+MGKL CSGD S+QN L+LV   LNQIPSYGHRE L LYSALST D
Sbjct: 141  ITELGGSPESHINAMMGKLECSGDASLQNALELVLGCLNQIPSYGHREALILYSALSTCD 200

Query: 1199 PGDIMETIQKCKLSKIRCSVIGLSAELFVCKYLCQETGGSYSVALDEPHLKELVLEHXXX 1020
            PGD+METIQKCK SKIRCSVIGL+AE+FVCK+LCQETGG+YSVALDE H KEL+LEH   
Sbjct: 201  PGDLMETIQKCKKSKIRCSVIGLAAEMFVCKHLCQETGGTYSVALDESHFKELILEHAPP 260

Query: 1019 XXXXXXXXXANLIKMGFPQRAAEGIISICSCHKEAKFGGGYTCPRCKARVCELPTECRIC 840
                     ANLIKMGFPQR+AEG ++IC+CH+EAK GGGYTCPRCK RVCELPTECRIC
Sbjct: 261  PPAIAEYATANLIKMGFPQRSAEGSVAICTCHEEAKAGGGYTCPRCKVRVCELPTECRIC 320

Query: 839  GLTLVSSPHLARSYHHLFPITPFDDVSLSYINNQPKD----CFGCQQSLLNPGNIPGPRA 672
            GLTL+SSPHLARSYHHLFPI  FD+VS S  N+  +     CFGCQQSL   GN PG   
Sbjct: 321  GLTLISSPHLARSYHHLFPIVMFDEVSPSSQNDSSRSFSNTCFGCQQSLFTQGNKPGLSV 380

Query: 671  ACPKCKQQFCLDCDIYIHESLHNCPGCESLRHSKS 567
             CPKCKQQFCLDCDIYIHESLHNCPGCES RHSKS
Sbjct: 381  ICPKCKQQFCLDCDIYIHESLHNCPGCESSRHSKS 415


>ref|XP_003624959.1| General transcription factor IIH subunit [Medicago truncatula]
            gi|355499974|gb|AES81177.1| General transcription factor
            IIH subunit [Medicago truncatula]
          Length = 426

 Score =  622 bits (1604), Expect = e-175
 Identities = 302/397 (76%), Positives = 335/397 (84%), Gaps = 12/397 (3%)
 Frame = -1

Query: 1721 GREAWERTYADERSWESLQEDESGLLRPIDNKALYHAQYRRRLRT----ATSARIQKGLI 1554
            G EAWER Y ++RSWESLQEDESGLLRPID  A++HAQYRRRLR     A +ARIQKGLI
Sbjct: 25   GLEAWERAYTEDRSWESLQEDESGLLRPIDTTAIHHAQYRRRLRALASNAATARIQKGLI 84

Query: 1553 RYLYIVIDLSRAASEMDYKPSRMAVVAKQVEAFIREFFDQNPLSQIGLVTLKDGVANCLT 1374
            RYLYIV+DLS+AASE D++PSRMAV+AKQVE FIREFFDQNPLS +GLVT KDGVANCLT
Sbjct: 85   RYLYIVVDLSKAASERDFRPSRMAVIAKQVELFIREFFDQNPLSHVGLVTTKDGVANCLT 144

Query: 1373 DLGGSPESHIKALMGKLVCSGDPSIQNGLDLVHDLLNQIPSYGHREVLFLYSALSTSDPG 1194
            DLGGSPESHIKALMGKL CSGD S+QN L+LVH  LNQIPSYGHREVL LYSALST DPG
Sbjct: 145  DLGGSPESHIKALMGKLECSGDASLQNALELVHSNLNQIPSYGHREVLILYSALSTCDPG 204

Query: 1193 DIMETIQKCKLSKIRCSVIGLSAELFVCKYLCQETGGSYSVALDEPHLKELVLEHXXXXX 1014
            D+METIQKCK SKIRCSVIGL+AE+F+CK+LCQETGG+YSVALDE H KEL+LEH     
Sbjct: 205  DLMETIQKCKKSKIRCSVIGLAAEMFICKHLCQETGGTYSVALDESHFKELILEHSPPPP 264

Query: 1013 XXXXXXXANLIKMGFPQRAAEGIISICSCHKEAKFGGGYTCPRCKARVCELPTECRICGL 834
                   ANLIKMGFPQRAAEG ++IC+CH+EAK GGGYTCPRCK RVCELPTECR+CGL
Sbjct: 265  AIAEYATANLIKMGFPQRAAEGSVAICTCHEEAKTGGGYTCPRCKVRVCELPTECRVCGL 324

Query: 833  TLVSSPHLARSYHHLFPITPFDDVSLSYINNQ----PKDCFGCQQSLLNPGNIPGPRA-- 672
            TL+SSPHLARSYHHLFPI PF ++S S  N+     P  CFGCQQSLL+ G   G +A  
Sbjct: 325  TLISSPHLARSYHHLFPIVPFAEISPSSQNDPNHSFPNTCFGCQQSLLSQGFGAGNKAEL 384

Query: 671  --ACPKCKQQFCLDCDIYIHESLHNCPGCESLRHSKS 567
              +CPKCKQQFCLDCD+YIHESLHNCPGCES RHSKS
Sbjct: 385  SVSCPKCKQQFCLDCDMYIHESLHNCPGCESFRHSKS 421


>ref|XP_002331276.1| predicted protein [Populus trichocarpa]
            gi|566166073|ref|XP_006384271.1| basic transcription
            factor 2 family protein [Populus trichocarpa]
            gi|550340817|gb|ERP62068.1| basic transcription factor 2
            family protein [Populus trichocarpa]
          Length = 412

 Score =  609 bits (1570), Expect = e-171
 Identities = 300/390 (76%), Positives = 331/390 (84%), Gaps = 9/390 (2%)
 Frame = -1

Query: 1715 EAW-ERTYADERSWESLQEDESGLLRPIDNKALYHAQYRRRLRTATSA----RIQKGLIR 1551
            + W ER Y+DERSWE+LQEDESGLLRP+DNKA+YHAQYRRRLR+ ++A    RIQKGLIR
Sbjct: 23   DGWGERNYSDERSWEALQEDESGLLRPLDNKAMYHAQYRRRLRSLSTASNSQRIQKGLIR 82

Query: 1550 YLYIVIDLSRAASEMDYKPSRMAVVAKQVEAFIREFFDQNPLSQIGLVTLKDGVANCLTD 1371
            +LYIV+DLSRAAS MD++PSRMAVVA+ VEAFIREFFDQNPLSQI LVT+KDGVA  LT+
Sbjct: 83   FLYIVLDLSRAASVMDFRPSRMAVVAQNVEAFIREFFDQNPLSQIALVTIKDGVAYSLTE 142

Query: 1370 LGGSPESHIKALMGKLVCSGDPSIQNGLDLVHDLLNQIPSYGHREVLFLYSALSTSDPGD 1191
            LGGSPESHIKALM KL CSGD S+QN L+LVH+ L++IPSYG+REVL LYSAL+T DPGD
Sbjct: 143  LGGSPESHIKALMAKLECSGDSSLQNALELVHEYLDKIPSYGNREVLILYSALTTCDPGD 202

Query: 1190 IMETIQKCKLSKIRCSVIGLSAELFVCKYLCQETGGSYSVALDEPHLKELVLEHXXXXXX 1011
            IMETIQKCK SK+RCSVIGLSAE+F+CK+LCQETGG YSVALDE H KEL+LEH      
Sbjct: 203  IMETIQKCKKSKMRCSVIGLSAEMFICKHLCQETGGLYSVALDESHFKELILEHAPPPPA 262

Query: 1010 XXXXXXANLIKMGFPQRAAEGIISICSCHKEAKFGGGYTCPRCKARVCELPTECRICGLT 831
                  ANLIKMGFPQRAAEG ISICSCHKE+K G GY CPRCKARVCELPTECRICGLT
Sbjct: 263  IAEFAIANLIKMGFPQRAAEGSISICSCHKESKVGEGYICPRCKARVCELPTECRICGLT 322

Query: 830  LVSSPHLARSYHHLFPITPFDDVSLSYIN----NQPKDCFGCQQSLLNPGNIPGPRAACP 663
            LVSSPHLARSYHHLFPI PFD+V  S  N       K CFGCQQSL+NPGN P  + ACP
Sbjct: 323  LVSSPHLARSYHHLFPIAPFDEVKPSRQNEPHRRSQKTCFGCQQSLVNPGNKPSLQVACP 382

Query: 662  KCKQQFCLDCDIYIHESLHNCPGCESLRHS 573
            KCKQ FCLDCDIYIHESLHNCPGCESLR S
Sbjct: 383  KCKQYFCLDCDIYIHESLHNCPGCESLRAS 412