BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00008583
         (1691 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I an...   563   e-157
ref|XP_006344900.1| PREDICTED: DNA-directed RNA polymerases I an...   555   e-155
ref|XP_004251939.1| PREDICTED: DNA-directed RNA polymerases I an...   553   e-155
gb|EOY11969.1| RNA polymerase I subunit 43 isoform 1 [Theobroma ...   549   e-153
ref|XP_006474843.1| PREDICTED: DNA-directed RNA polymerases I an...   531   e-148
ref|XP_006452630.1| hypothetical protein CICLE_v10008413mg [Citr...   530   e-147
gb|EPS59249.1| hypothetical protein M569_15560, partial [Genlise...   515   e-143
ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, ...   505   e-140
ref|XP_002300385.1| DNA-directed RNA polymerase family protein [...   504   e-140
gb|EXB51013.1| DNA-directed RNA polymerases I and III subunit RP...   492   e-136
ref|XP_003532185.1| PREDICTED: DNA-directed RNA polymerases I an...   491   e-136
ref|NP_001242652.1| uncharacterized protein LOC100786622 [Glycin...   491   e-136
ref|XP_004488284.1| PREDICTED: DNA-directed RNA polymerases I an...   490   e-136
ref|XP_004148257.1| PREDICTED: DNA-directed RNA polymerases I an...   488   e-135
ref|XP_004498147.1| PREDICTED: DNA-directed RNA polymerases I an...   488   e-135
gb|ESW18590.1| hypothetical protein PHAVU_006G053600g [Phaseolus...   478   e-132
ref|XP_002888129.1| ATRPAC43 [Arabidopsis lyrata subsp. lyrata] ...   474   e-131
gb|EOY11972.1| RNA polymerase I subunit 43 isoform 4 [Theobroma ...   474   e-131
ref|NP_176261.1| RNA polymerase I subunit 43 [Arabidopsis thalia...   473   e-130
gb|EMJ06508.1| hypothetical protein PRUPE_ppa006811mg [Prunus pe...   472   e-130

>ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
            [Vitis vinifera] gi|296089944|emb|CBI39763.3| unnamed
            protein product [Vitis vinifera]
          Length = 372

 Score =  563 bits (1450), Expect = e-157
 Identities = 282/388 (72%), Positives = 318/388 (81%), Gaps = 1/388 (0%)
 Frame = +1

Query: 103  PVWELPDVPSGQLPPHLELQRTRVLCNKIAPTQTEKFQYSGAYAALGVDNSLRLDEFRKN 282
            P  ++PDVP GQLPPH+ELQRTRVLCN  APT TE  QYSGAY+++GVDNSLR+D+F  N
Sbjct: 5    PALDMPDVPKGQLPPHIELQRTRVLCNFDAPTHTENVQYSGAYSSMGVDNSLRMDQFCNN 64

Query: 283  FRVEFVPPXXXXXXXXXXXXXXXXXXXXXXXXXXFDMIGIDASLANAFRRILIAEIPTMA 462
            FRVE +                            FDMIGID S+ANAFRRILIAE+PTMA
Sbjct: 65   FRVEVI--------------------RLSEDDMEFDMIGIDPSIANAFRRILIAELPTMA 104

Query: 463  IEKVLIANNTSVVQDEVLAHRLGLIPIIVDPRLFEYMSENDVPNEKNTIVFNLHVRCEKG 642
            IEKVLIANNTS+VQDEVLAHRLGLIPI  DPRLF+ +SEND PNEKNTIVFNLHVRCE+G
Sbjct: 105  IEKVLIANNTSIVQDEVLAHRLGLIPINADPRLFDDLSENDTPNEKNTIVFNLHVRCERG 164

Query: 643  GSRITVKSNELKWLPSGSEFLLATENSAPNATEKRKTYTSFSCSQESLPEFSDNPI-TVY 819
            G R+TVKSNELKWLP GSEF LATEN+  ++T K KTYTSFSCSQ+SLPEFSD  I   +
Sbjct: 165  GPRLTVKSNELKWLPHGSEFPLATENTTSSSTSKPKTYTSFSCSQDSLPEFSDKSIGPKH 224

Query: 820  PDITIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLQDVEGKKAEELV 999
            PDI IA+LGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLQ++E +KAEELV
Sbjct: 225  PDIIIAKLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLQEIEDEKAEELV 284

Query: 1000 KKCPVGVFDLEDIGNDMQRATVKYPRKCTLCRECVRGNGWEEVVSLRRVKDHFIFSIEST 1179
            KKCPV VFD+EDI    ++ATV  PR CTLCREC+RG+ W++ V++RRVK+HFIF+IEST
Sbjct: 285  KKCPVNVFDIEDIAKGKKKATVARPRACTLCRECIRGDDWDKHVAIRRVKNHFIFTIEST 344

Query: 1180 GALPPEVLFTEAVKNLEDKCERVITELS 1263
            GALPPEVLF EAVK LEDKCERVITELS
Sbjct: 345  GALPPEVLFNEAVKVLEDKCERVITELS 372


>ref|XP_006344900.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
            [Solanum tuberosum]
          Length = 393

 Score =  555 bits (1429), Expect = e-155
 Identities = 277/390 (71%), Positives = 316/390 (81%), Gaps = 1/390 (0%)
 Frame = +1

Query: 97   KIPVWELPDVPSGQLPPHLELQRTRVLCNKIAPTQTEKFQYSGAYAALGVDNSLRLDEFR 276
            K+ VW+LPD+P G+LPPH+ELQRTRVLC  +APT TE   YSGAYAA+GVDNS+R ++FR
Sbjct: 24   KVSVWDLPDLPKGKLPPHIELQRTRVLCGSLAPTNTENVNYSGAYAAMGVDNSVRFEQFR 83

Query: 277  KNFRVEFVPPXXXXXXXXXXXXXXXXXXXXXXXXXXFDMIGIDASLANAFRRILIAEIPT 456
             NF+VE V                            FDMIGID SLANAFRRILIAE+PT
Sbjct: 84   NNFKVEIV--------------------RLEEDELEFDMIGIDPSLANAFRRILIAELPT 123

Query: 457  MAIEKVLIANNTSVVQDEVLAHRLGLIPIIVDPRLFEYMSENDVPNEKNTIVFNLHVRCE 636
            MAIEKVLIANNTS++QDEVLAHRLGLIPI VDPRLFEYMSENDVPNEKNTIVF LH RC 
Sbjct: 124  MAIEKVLIANNTSIIQDEVLAHRLGLIPIEVDPRLFEYMSENDVPNEKNTIVFKLHARCT 183

Query: 637  KGGSRITVKSNELKWLPSGSEFLLATENSAPNATEKRKTYTSFSCSQESLPEFSDNPITV 816
            KG  R+ V S+ELKWLP+GSE +L TE+SA +++ K KTYTSFSCSQ++LPEFS++PI  
Sbjct: 184  KGSDRLRVLSSELKWLPNGSELILGTEHSASSSSAKPKTYTSFSCSQDTLPEFSNDPIAP 243

Query: 817  YP-DITIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLQDVEGKKAEE 993
               DI +A+LGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLL+D+E  +AE 
Sbjct: 244  KDADIIVAKLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLRDIEDDEAEA 303

Query: 994  LVKKCPVGVFDLEDIGNDMQRATVKYPRKCTLCRECVRGNGWEEVVSLRRVKDHFIFSIE 1173
            LVKKCPV VFD+EDIG   +RATV  PR CTLCREC+R  GW++ V+LRRV DHFIF+IE
Sbjct: 304  LVKKCPVKVFDIEDIGKGKKRATVARPRICTLCRECIREEGWDKNVALRRVNDHFIFTIE 363

Query: 1174 STGALPPEVLFTEAVKNLEDKCERVITELS 1263
            STGALPPEVLFTEAVK LE+KCERVITELS
Sbjct: 364  STGALPPEVLFTEAVKILEEKCERVITELS 393


>ref|XP_004251939.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
            [Solanum lycopersicum]
          Length = 393

 Score =  553 bits (1426), Expect = e-155
 Identities = 276/390 (70%), Positives = 315/390 (80%), Gaps = 1/390 (0%)
 Frame = +1

Query: 97   KIPVWELPDVPSGQLPPHLELQRTRVLCNKIAPTQTEKFQYSGAYAALGVDNSLRLDEFR 276
            K+ VW+LPD+P G+LPPH+ELQRTRVLC  +APT TE   YSGAYAA+GVDNS+R ++FR
Sbjct: 24   KVSVWDLPDLPKGKLPPHIELQRTRVLCGSLAPTNTENVNYSGAYAAMGVDNSVRFEQFR 83

Query: 277  KNFRVEFVPPXXXXXXXXXXXXXXXXXXXXXXXXXXFDMIGIDASLANAFRRILIAEIPT 456
             NF+VE V                            FDMIGID SLANAFRRILIAE+PT
Sbjct: 84   DNFKVEIV--------------------RLEEDELEFDMIGIDPSLANAFRRILIAELPT 123

Query: 457  MAIEKVLIANNTSVVQDEVLAHRLGLIPIIVDPRLFEYMSENDVPNEKNTIVFNLHVRCE 636
            MAIEKVLIANNTS++QDEVLAHRLGLIPI VDPRLFEYMSENDVPNEKNTIVF LHVRC 
Sbjct: 124  MAIEKVLIANNTSIIQDEVLAHRLGLIPIKVDPRLFEYMSENDVPNEKNTIVFKLHVRCT 183

Query: 637  KGGSRITVKSNELKWLPSGSEFLLATENSAPNATEKRKTYTSFSCSQESLPEFSDNPITV 816
            KG  R+ V S+ELKWLP+GSE +L TE+SA +++ K KTYTSFSCSQ++ PEFSD PI  
Sbjct: 184  KGSDRLRVLSSELKWLPNGSELILGTEHSASSSSAKPKTYTSFSCSQDTRPEFSDEPIAP 243

Query: 817  YP-DITIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLQDVEGKKAEE 993
               DI +A+LGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV+LL+D+E  +AE 
Sbjct: 244  KDADIIVAKLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLRDIEDDEAEA 303

Query: 994  LVKKCPVGVFDLEDIGNDMQRATVKYPRKCTLCRECVRGNGWEEVVSLRRVKDHFIFSIE 1173
            LVKKCP+ VFD+EDIG   +RATV  PR CTLCREC+R  GW++ V+LRRV DHFIF+IE
Sbjct: 304  LVKKCPLKVFDIEDIGKGKKRATVARPRACTLCRECIREEGWDKNVALRRVNDHFIFTIE 363

Query: 1174 STGALPPEVLFTEAVKNLEDKCERVITELS 1263
            STGALPPEVLFTEAVK LE+KCERVITELS
Sbjct: 364  STGALPPEVLFTEAVKILEEKCERVITELS 393


>gb|EOY11969.1| RNA polymerase I subunit 43 isoform 1 [Theobroma cacao]
          Length = 383

 Score =  549 bits (1414), Expect = e-153
 Identities = 278/390 (71%), Positives = 311/390 (79%), Gaps = 1/390 (0%)
 Frame = +1

Query: 97   KIPVWELPDVPSGQLPPHLELQRTRVLCNKIAPTQTEKFQYSGAYAALGVDNSLRLDEFR 276
            K  +W+LPDVP+GQLPPHLELQRTRVLCNK AP  TE   YSGAYA++GVDNSLRLD F 
Sbjct: 14   KFSIWDLPDVPAGQLPPHLELQRTRVLCNKDAPIHTESVLYSGAYASMGVDNSLRLDHFC 73

Query: 277  KNFRVEFVPPXXXXXXXXXXXXXXXXXXXXXXXXXXFDMIGIDASLANAFRRILIAEIPT 456
             NFRVE V                            FDMIGIDA++ANAFRRILIAE+PT
Sbjct: 74   HNFRVEVV--------------------RLTEEDMEFDMIGIDAAIANAFRRILIAELPT 113

Query: 457  MAIEKVLIANNTSVVQDEVLAHRLGLIPIIVDPRLFEYMSENDVPNEKNTIVFNLHVRCE 636
            MAIEKVLIANNTSVVQDEVLAHRLGLIPI VDPRLFEYMSEND PNEKNTIVF LHV C+
Sbjct: 114  MAIEKVLIANNTSVVQDEVLAHRLGLIPISVDPRLFEYMSENDQPNEKNTIVFKLHVHCK 173

Query: 637  KGGSRITVKSNELKWLPSGSEFLLATENSAPNATEKRKTYTSFSCSQESLPEFSDNPITV 816
            +G  RITVKS+ELKWLP+GSE +  +   A ++  K +TYTSFSCSQ++LPEF++NPI  
Sbjct: 174  RGSPRITVKSDELKWLPNGSELIKESRKVASDSASKPETYTSFSCSQDTLPEFANNPIAP 233

Query: 817  -YPDITIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLQDVEGKKAEE 993
             YPDI I++LGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLL++VE   AE 
Sbjct: 234  KYPDIIISKLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDDLAEG 293

Query: 994  LVKKCPVGVFDLEDIGNDMQRATVKYPRKCTLCRECVRGNGWEEVVSLRRVKDHFIFSIE 1173
            L  KCPV VFD+ED+G   +RATV  PR CTLCREC+R   WE+ V++ RVKDHFIF+IE
Sbjct: 294  LKSKCPVNVFDIEDLGKGKKRATVARPRACTLCRECIRDEEWEKRVAIHRVKDHFIFTIE 353

Query: 1174 STGALPPEVLFTEAVKNLEDKCERVITELS 1263
            STGALPPEVLFTEAVK LEDKCERVITELS
Sbjct: 354  STGALPPEVLFTEAVKILEDKCERVITELS 383


>ref|XP_006474843.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
            [Citrus sinensis]
          Length = 382

 Score =  531 bits (1369), Expect = e-148
 Identities = 274/387 (70%), Positives = 308/387 (79%), Gaps = 1/387 (0%)
 Frame = +1

Query: 106  VWELPDVPSGQLPPHLELQRTRVLCNKIAPTQTEKFQYSGAYAALGVDNSLRLDEFRKNF 285
            +W+LPDVP  +LPPH+E QRTRV CN  AP  TE   YSGAYA++GVDNSL+LD F  NF
Sbjct: 18   IWDLPDVPQ-KLPPHIEFQRTRVQCNLDAPIHTENVMYSGAYASMGVDNSLQLDHFCNNF 76

Query: 286  RVEFVPPXXXXXXXXXXXXXXXXXXXXXXXXXXFDMIGIDASLANAFRRILIAEIPTMAI 465
            RVE +                            FD+IGIDA++ANAFRRILIAE+PTMAI
Sbjct: 77   RVEVI--------------------RLTKDDMEFDLIGIDAAIANAFRRILIAELPTMAI 116

Query: 466  EKVLIANNTSVVQDEVLAHRLGLIPIIVDPRLFEYMSENDVPNEKNTIVFNLHVRCEKGG 645
            EKVLIANNTSV+QDEVLAHRLGLIPIIVDPRLFEYMSEND  NEKNTIVF LHV CE+GG
Sbjct: 117  EKVLIANNTSVIQDEVLAHRLGLIPIIVDPRLFEYMSENDTSNEKNTIVFKLHVLCERGG 176

Query: 646  SRITVKSNELKWLPSGSEFLLATENSAPNATEKRKTYTSFSCSQESLPEFSDNPITVYPD 825
             R+TVK+NELKWLP+GSE  L T+  + N   K +TYTSFS SQ+SLPEFS+NPI    D
Sbjct: 177  PRLTVKTNELKWLPNGSELPLETKPDS-NPLSKPRTYTSFSSSQDSLPEFSNNPIRPMLD 235

Query: 826  ITIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLQDVEGKKAEELVKK 1005
            ITIARLGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPE+VLL+DVE + AE+LVK 
Sbjct: 236  ITIARLGPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEIVLLEDVEDEDAEKLVKT 295

Query: 1006 CPVGVFDLEDIGNDMQRATVKYPRKCTLCRECVR-GNGWEEVVSLRRVKDHFIFSIESTG 1182
            CPV VFD+EDIG+  +RATV  PR CTLCREC+R G  WE+ VS+RRVKDHFIF+IESTG
Sbjct: 296  CPVNVFDIEDIGSGKKRATVAQPRACTLCRECLRCGEEWEKRVSIRRVKDHFIFTIESTG 355

Query: 1183 ALPPEVLFTEAVKNLEDKCERVITELS 1263
            AL PE LFTEAVK LEDKCERVITELS
Sbjct: 356  ALSPETLFTEAVKILEDKCERVITELS 382


>ref|XP_006452630.1| hypothetical protein CICLE_v10008413mg [Citrus clementina]
            gi|557555856|gb|ESR65870.1| hypothetical protein
            CICLE_v10008413mg [Citrus clementina]
          Length = 421

 Score =  530 bits (1364), Expect = e-147
 Identities = 273/387 (70%), Positives = 308/387 (79%), Gaps = 1/387 (0%)
 Frame = +1

Query: 106  VWELPDVPSGQLPPHLELQRTRVLCNKIAPTQTEKFQYSGAYAALGVDNSLRLDEFRKNF 285
            +W+LPDVP  +LPPH+E QRTRV CN  AP  TE   YSGAYA++GVDNSL+LD F  NF
Sbjct: 57   IWDLPDVPQ-KLPPHIEFQRTRVQCNLDAPIHTENVMYSGAYASMGVDNSLQLDHFCNNF 115

Query: 286  RVEFVPPXXXXXXXXXXXXXXXXXXXXXXXXXXFDMIGIDASLANAFRRILIAEIPTMAI 465
            RVE +                            FD+IGIDA++ANAFRRILIAE+PTMAI
Sbjct: 116  RVEVI--------------------RLTKDDMEFDLIGIDAAIANAFRRILIAELPTMAI 155

Query: 466  EKVLIANNTSVVQDEVLAHRLGLIPIIVDPRLFEYMSENDVPNEKNTIVFNLHVRCEKGG 645
            EKVLIANNTSV+QDEVLAHRLGLIPIIVDPRLFEYMSEND  NEKNTIVF LHV CE+GG
Sbjct: 156  EKVLIANNTSVIQDEVLAHRLGLIPIIVDPRLFEYMSENDTSNEKNTIVFKLHVLCERGG 215

Query: 646  SRITVKSNELKWLPSGSEFLLATENSAPNATEKRKTYTSFSCSQESLPEFSDNPITVYPD 825
             R+TVK+NELKWLP+GSE  L T+  + N + K +TYTSFS SQ+ LPEFS+NPI    D
Sbjct: 216  PRLTVKTNELKWLPNGSELPLETKPDS-NPSSKPRTYTSFSSSQDLLPEFSNNPIRPMLD 274

Query: 826  ITIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLQDVEGKKAEELVKK 1005
            ITIARLGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPE+VLL+DVE + AE+LVK 
Sbjct: 275  ITIARLGPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEIVLLEDVEDEDAEKLVKT 334

Query: 1006 CPVGVFDLEDIGNDMQRATVKYPRKCTLCRECVR-GNGWEEVVSLRRVKDHFIFSIESTG 1182
            CPV VFD+EDIG+  +RATV  PR CTLCREC+R G  WE+ VS+RRVKDHFIF+IESTG
Sbjct: 335  CPVNVFDIEDIGSGKKRATVARPRACTLCRECLRCGEEWEKRVSIRRVKDHFIFTIESTG 394

Query: 1183 ALPPEVLFTEAVKNLEDKCERVITELS 1263
            AL PE LFTEAVK LEDKCERVITELS
Sbjct: 395  ALSPETLFTEAVKILEDKCERVITELS 421


>gb|EPS59249.1| hypothetical protein M569_15560, partial [Genlisea aurea]
          Length = 364

 Score =  515 bits (1326), Expect = e-143
 Identities = 258/383 (67%), Positives = 299/383 (78%), Gaps = 1/383 (0%)
 Frame = +1

Query: 106  VWELPDVPSGQLPPHLELQRTRVLCNKIAPTQTEKFQYSGAYAALGVDNSLRLDEFRKNF 285
            +W+LPDVP G+LPPHL+LQRTRVLC   APT TE  QYSGAYA +GVDNSL  D FR+NF
Sbjct: 1    LWDLPDVPGGELPPHLQLQRTRVLCTSEAPTYTENIQYSGAYALMGVDNSLPFDSFRENF 60

Query: 286  RVEFVPPXXXXXXXXXXXXXXXXXXXXXXXXXXFDMIGIDASLANAFRRILIAEIPTMAI 465
            RVE V                            FD+IGIDA++ANAFRRILIAE+PTMAI
Sbjct: 61   RVEIVS--------------------MDEHDIEFDLIGIDAAIANAFRRILIAELPTMAI 100

Query: 466  EKVLIANNTSVVQDEVLAHRLGLIPIIVDPRLFEYMSENDVPNEKNTIVFNLHVRCEKGG 645
            EKVLIANNTSV+ DEVL+HRLGLIP+ VDPR F +MSE+D PNEKNT+VF LHV CE+ G
Sbjct: 101  EKVLIANNTSVIPDEVLSHRLGLIPLKVDPRPFSFMSEHDEPNEKNTVVFKLHVSCERKG 160

Query: 646  SRITVKSNELKWLPSGSEFLLATENSAPNATEKRKTYTSFSCSQESLPEFSDNPITVYPD 825
            SR TVK++ELKWLP+GSE  L TE    N+T K +TYTSF+CSQ+S+PEFS + +    D
Sbjct: 161  SRKTVKTDELKWLPNGSELRLETERPNINSTSKIQTYTSFNCSQDSMPEFSGSTLRPTSD 220

Query: 826  -ITIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLQDVEGKKAEELVK 1002
             ITIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYR+LPE+ LL +++ KKA+ELVK
Sbjct: 221  EITIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRLLPEIALLDEIKNKKAKELVK 280

Query: 1003 KCPVGVFDLEDIGNDMQRATVKYPRKCTLCRECVRGNGWEEVVSLRRVKDHFIFSIESTG 1182
            KCP  VFD+ED G D  RATV  PR C+LCREC+R   WE++VS+RRVKDHFIF IESTG
Sbjct: 281  KCPQKVFDIEDAGGDGIRATVARPRNCSLCRECIRDEEWEKLVSVRRVKDHFIFKIESTG 340

Query: 1183 ALPPEVLFTEAVKNLEDKCERVI 1251
            ALPPEVLFTEAVK LE+KCE  +
Sbjct: 341  ALPPEVLFTEAVKILEEKCENAM 363


>ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, putative [Ricinus
            communis] gi|223538024|gb|EEF39637.1| DNA-directed RNA
            polymerase I/III subunits, putative [Ricinus communis]
          Length = 374

 Score =  505 bits (1300), Expect = e-140
 Identities = 259/390 (66%), Positives = 298/390 (76%), Gaps = 1/390 (0%)
 Frame = +1

Query: 97   KIPVWELPDVPSGQLPPHLELQRTRVLCNKIAPTQTEKFQYSGAYAALGVDNSLRLDEFR 276
            K  +W+LPDVP GQLPPHL+LQRTRV+C   AP  T+   YSGAYA++GVDNSL+LD FR
Sbjct: 13   KFSIWDLPDVPMGQLPPHLQLQRTRVVCKSDAPIHTDNIVYSGAYASIGVDNSLQLDCFR 72

Query: 277  KNFRVEFVPPXXXXXXXXXXXXXXXXXXXXXXXXXXFDMIGIDASLANAFRRILIAEIPT 456
             NF+VE +                            FDMIGIDA++ANAFRRILI+E+PT
Sbjct: 73   DNFKVEVIQ--------------------LTKDDMEFDMIGIDAAIANAFRRILISELPT 112

Query: 457  MAIEKVLIANNTSVVQDEVLAHRLGLIPIIVDPRLFEYMSENDVPNEKNTIVFNLHVRCE 636
            MAIEKVLIANNTS++QDEVLAHRLGLIPI  DPRLFEY+S ND PNEKNTIVF LH  C+
Sbjct: 113  MAIEKVLIANNTSLIQDEVLAHRLGLIPINADPRLFEYLSANDTPNEKNTIVFKLHASCK 172

Query: 637  KGGSRITVKSNELKWLPSGSEFLLATENSAPNATEKRKTYTSFSCSQESLPEFSDNPITV 816
            +G  R TV S ELKWLP GS+ L  +E     A  K  TYTSF+  Q+ +P+    P++ 
Sbjct: 173  RGEPRRTVYSEELKWLPGGSQLLKESEK----ADSKPSTYTSFTDKQDFIPK----PVSP 224

Query: 817  YPD-ITIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLQDVEGKKAEE 993
              D I +A+LGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL+D+E + AEE
Sbjct: 225  SEDKIIVAKLGPGQEIELEAHAVKGLGKTHAKWSPVATAWYRMLPEVVLLEDIEDEIAEE 284

Query: 994  LVKKCPVGVFDLEDIGNDMQRATVKYPRKCTLCRECVRGNGWEEVVSLRRVKDHFIFSIE 1173
            L KKCPV VFD+EDIGN  +RATV  PR CTLCREC+RG  W++ VSLRRVKDHFIF+IE
Sbjct: 285  LTKKCPVNVFDIEDIGNGKKRATVARPRACTLCRECIRGGEWDKRVSLRRVKDHFIFTIE 344

Query: 1174 STGALPPEVLFTEAVKNLEDKCERVITELS 1263
            STGALPPEVLFTEAVK LEDKCERVITELS
Sbjct: 345  STGALPPEVLFTEAVKVLEDKCERVITELS 374


>ref|XP_002300385.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|222847643|gb|EEE85190.1| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 390

 Score =  504 bits (1297), Expect = e-140
 Identities = 256/386 (66%), Positives = 296/386 (76%), Gaps = 1/386 (0%)
 Frame = +1

Query: 109  WELPDVPSGQLPPHLELQRTRVLCNKIAPTQTEKFQYSGAYAALGVDNSLRLDEFRKNFR 288
            W L DV  GQLPPH+  Q TRV C   APT TE  QYSG+YA++GVDNSLRLD FR+NFR
Sbjct: 29   WNLKDVERGQLPPHIRKQGTRVYCKPDAPTNTETLQYSGSYASMGVDNSLRLDSFRENFR 88

Query: 289  VEFVPPXXXXXXXXXXXXXXXXXXXXXXXXXXFDMIGIDASLANAFRRILIAEIPTMAIE 468
            ++ +                            FDMIGIDA++ANAFRRILI+E+PTMAIE
Sbjct: 89   IKVIA--------------------LDKDKMEFDMIGIDAAVANAFRRILISEVPTMAIE 128

Query: 469  KVLIANNTSVVQDEVLAHRLGLIPIIVDPRLFEYMSENDVPNEKNTIVFNLHVRCEKGGS 648
            KV IANNTSV+QDEVLAHRLGLIPI VDPRLFEY+S ND PNEKNTIV  LH RC +G  
Sbjct: 129  KVFIANNTSVIQDEVLAHRLGLIPIKVDPRLFEYLSANDTPNEKNTIVLKLHARCNRGQP 188

Query: 649  RITVKSNELKWLPSGSEFLLATENSAPNATEKRKTYTSFSCSQESLPEFSDNPITVYPDI 828
            R +V S ELKWLP+GSEF  A E+  P++  K  TYTSFSC Q+SLPEF+ NPI+   DI
Sbjct: 189  RCSVYSQELKWLPNGSEF--AKESEKPDS--KPSTYTSFSCGQDSLPEFAGNPISTVEDI 244

Query: 829  TIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLQDVEGKKAEELVKKC 1008
             +A+LGPGQEIELEAHAVKGMGKTHAKWSPV TAWYRM PEVVLL++++G+ AEEL++KC
Sbjct: 245  ILAKLGPGQEIELEAHAVKGMGKTHAKWSPVGTAWYRMFPEVVLLENIKGEDAEELIRKC 304

Query: 1009 PVGVFDLEDIGNDMQRATVKYPRKCTLCRECVRGN-GWEEVVSLRRVKDHFIFSIESTGA 1185
            P GVFD+ED GN  ++A V   R CTLCREC+RG+  WE+ V+L RVKDHFIF+IESTGA
Sbjct: 305  PSGVFDIEDTGNAKKKAIVADSRACTLCRECIRGDEEWEKRVALHRVKDHFIFTIESTGA 364

Query: 1186 LPPEVLFTEAVKNLEDKCERVITELS 1263
            LPPEVLFTEAVK LE KCERVITELS
Sbjct: 365  LPPEVLFTEAVKILEAKCERVITELS 390


>gb|EXB51013.1| DNA-directed RNA polymerases I and III subunit RPAC1 [Morus
            notabilis]
          Length = 411

 Score =  492 bits (1267), Expect = e-136
 Identities = 262/386 (67%), Positives = 297/386 (76%), Gaps = 2/386 (0%)
 Frame = +1

Query: 112  ELPDVPSGQLPPHLELQRTRVLCNKIAPTQTEKFQYSGAYAALGVDNSLRLDEFRKNFRV 291
            +L DVP G+LPPHLE QRT V C   AP  T+  QYSGAYA+LGVDNS+R+D F  NFRV
Sbjct: 48   KLSDVPMGKLPPHLEFQRTHVECKADAPLHTDTIQYSGAYASLGVDNSVRMDSFCDNFRV 107

Query: 292  EFVPPXXXXXXXXXXXXXXXXXXXXXXXXXXFDMIGIDASLANAFRRILIAEIPTMAIEK 471
            E +                            FDMIGID +LANAFRRILI+E+PTMAIE+
Sbjct: 108  EVM--------------------RLTEDDMEFDMIGIDPALANAFRRILISEVPTMAIER 147

Query: 472  VLIANNTSVVQDEVLAHRLGLIPIIVDPRLFEYMSENDVPNEKNTIVFNLHVRCEKGGSR 651
            VLIANNTSVVQDEVLAHRLGLIPI VDPRLFE+   N+ PNEKNTIVF LHVR  K    
Sbjct: 148  VLIANNTSVVQDEVLAHRLGLIPINVDPRLFEFAG-NNTPNEKNTIVFKLHVR-RKPNEP 205

Query: 652  ITVKSNELKWLPSGSEFLLATENS-APNATEKRKTYTSFSCSQESLPEFSDNPITVYPDI 828
             +VKSNEL W P GSEFLLA+E+S + + + K +TYTSF+C Q+SLPEFS+N I V  +I
Sbjct: 206  SSVKSNELIWSPKGSEFLLASEDSKSADTSSKPRTYTSFTCRQDSLPEFSNNAIKVMENI 265

Query: 829  TIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLQDVEGKKAEELVKKC 1008
             IA+LGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLLQ+VE + AEEL  KC
Sbjct: 266  LIAKLGPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEVVLLQEVEDEAAEELKAKC 325

Query: 1009 PVGVFDLEDIGNDMQRATVKYPRKCTLCRECVR-GNGWEEVVSLRRVKDHFIFSIESTGA 1185
            PVGVFD+EDIG   +RATV  PR CTLCREC+R G  WE+ VSLRR K+HFIF+IESTGA
Sbjct: 326  PVGVFDIEDIGKGRKRATVARPRGCTLCRECIRGGQQWEDRVSLRRRKNHFIFNIESTGA 385

Query: 1186 LPPEVLFTEAVKNLEDKCERVITELS 1263
            LPPEVLFTEAVK LEDKCERVI +LS
Sbjct: 386  LPPEVLFTEAVKILEDKCERVIADLS 411


>ref|XP_003532185.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
            [Glycine max]
          Length = 393

 Score =  491 bits (1265), Expect = e-136
 Identities = 263/389 (67%), Positives = 297/389 (76%), Gaps = 3/389 (0%)
 Frame = +1

Query: 106  VWELPDVPSGQLPPHLELQRTRVLCNKIAPTQTEKFQYSGAYAALGVDNSLRLDEFRKNF 285
            +  L +VPS +LPPHLEL +TRVLCN  AP  T+  QYSGAYA +GVDNS+RLD F +NF
Sbjct: 28   ILSLDNVPS-KLPPHLELFKTRVLCNNDAPVHTDTVQYSGAYAIMGVDNSVRLDSFCENF 86

Query: 286  RVEFVPPXXXXXXXXXXXXXXXXXXXXXXXXXXFDMIGIDASLANAFRRILIAEIPTMAI 465
            +VE                              FDMIGID ++ANAFRRILIAE+PTMAI
Sbjct: 87   KVEV--------------------KRLTDSDIEFDMIGIDPAIANAFRRILIAEVPTMAI 126

Query: 466  EKVLIANNTSVVQDEVLAHRLGLIPIIVDPRLFEYMSE-NDVPNEKNTIVFNLHVRCEKG 642
            E+V IANNTSVVQDEVL+HRLGLIPI  DPRLFEY     D  NEKNTIVF LHVRC+ G
Sbjct: 127  ERVYIANNTSVVQDEVLSHRLGLIPIRADPRLFEYPENAGDDKNEKNTIVFKLHVRCQVG 186

Query: 643  GSRITVKSNELKWLPSGSEFLLATENSAPNATEKRKTYTSFSCSQESLPEFSDNPITV-Y 819
              RITVKS++LKWLP+GSE  L  E+  PNA  K KT+TSF+CSQ+SLPEFS+N I + Y
Sbjct: 187  QPRITVKSDKLKWLPNGSE--LPCEDVKPNAGSKPKTFTSFTCSQDSLPEFSNNSIGLTY 244

Query: 820  PDITIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLQDVEGKKAEELV 999
             DI +A+LGPGQEIELEAHAVKG GKTHAKWSPVAT WYRMLPEVVLL+DVE + AEEL 
Sbjct: 245  SDIILAKLGPGQEIELEAHAVKGTGKTHAKWSPVATTWYRMLPEVVLLKDVEDELAEELK 304

Query: 1000 KKCPVGVFDLEDIGNDMQRATVKYPRKCTLCRECVR-GNGWEEVVSLRRVKDHFIFSIES 1176
             KCPV VFD+EDIG   +RA V  PR CTLCREC+R G  WE+ VSLRRVK+HFIF+IES
Sbjct: 305  NKCPVNVFDIEDIGKGKRRAKVARPRDCTLCRECIRGGKEWEDRVSLRRVKNHFIFTIES 364

Query: 1177 TGALPPEVLFTEAVKNLEDKCERVITELS 1263
            TGALPPEVLFTEAVK LEDKCERVITELS
Sbjct: 365  TGALPPEVLFTEAVKILEDKCERVITELS 393


>ref|NP_001242652.1| uncharacterized protein LOC100786622 [Glycine max]
            gi|255637183|gb|ACU18922.1| unknown [Glycine max]
          Length = 388

 Score =  491 bits (1265), Expect = e-136
 Identities = 264/389 (67%), Positives = 297/389 (76%), Gaps = 3/389 (0%)
 Frame = +1

Query: 106  VWELPDVPSGQLPPHLELQRTRVLCNKIAPTQTEKFQYSGAYAALGVDNSLRLDEFRKNF 285
            +  L +VPS +LPPHLEL +TRVLCN  AP  T+  QYSGAYA LGVDNS+RLD F +NF
Sbjct: 23   ILSLDNVPS-KLPPHLELFKTRVLCNNDAPVHTDTVQYSGAYAILGVDNSVRLDSFCENF 81

Query: 286  RVEFVPPXXXXXXXXXXXXXXXXXXXXXXXXXXFDMIGIDASLANAFRRILIAEIPTMAI 465
            +VE                              FDMIGID ++ANAFRRILIAE+PTMAI
Sbjct: 82   KVEV--------------------KRLTDSDIEFDMIGIDPAIANAFRRILIAEVPTMAI 121

Query: 466  EKVLIANNTSVVQDEVLAHRLGLIPIIVDPRLFEYMSE-NDVPNEKNTIVFNLHVRCEKG 642
            E+V IANNTSVVQDEVL+HRLGLIPI  DPRLFEY     D  NEKNTIVF LHVRC+ G
Sbjct: 122  ERVYIANNTSVVQDEVLSHRLGLIPIRADPRLFEYPENAGDDKNEKNTIVFKLHVRCQVG 181

Query: 643  GSRITVKSNELKWLPSGSEFLLATENSAPNATEKRKTYTSFSCSQESLPEFSDNPITV-Y 819
              RITVKS++LKWLP+GSE  L  E   PNA  K KT+TSF+CSQ+SLPEFS+N I + Y
Sbjct: 182  QPRITVKSDKLKWLPNGSE--LPCEGVKPNAGSKPKTFTSFTCSQDSLPEFSNNSIGLTY 239

Query: 820  PDITIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLQDVEGKKAEELV 999
             DI +A+LGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL+ VE + AEEL 
Sbjct: 240  SDIILAKLGPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEVVLLEAVEDELAEELK 299

Query: 1000 KKCPVGVFDLEDIGNDMQRATVKYPRKCTLCRECVR-GNGWEEVVSLRRVKDHFIFSIES 1176
             KCPV VFD+EDIG   +RA V  PR CTLCREC+R G  WE+ VSLRRVK+HFIF+IES
Sbjct: 300  NKCPVNVFDIEDIGKGKRRAKVARPRDCTLCRECIRGGKEWEDRVSLRRVKNHFIFTIES 359

Query: 1177 TGALPPEVLFTEAVKNLEDKCERVITELS 1263
            TGALPPEVLFTEAVK LEDKCERVITELS
Sbjct: 360  TGALPPEVLFTEAVKILEDKCERVITELS 388


>ref|XP_004488284.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
            [Cicer arietinum]
          Length = 388

 Score =  490 bits (1261), Expect = e-136
 Identities = 258/389 (66%), Positives = 297/389 (76%), Gaps = 3/389 (0%)
 Frame = +1

Query: 106  VWELPDVPSGQLPPHLELQRTRVLCNKIAPTQTEKFQYSGAYAALGVDNSLRLDEFRKNF 285
            +  L DVPS +L PHLEL +TRV+C+  AP  T+   YSGAYAALGVDNS+RLD F +NF
Sbjct: 23   IMNLEDVPS-KLSPHLELIKTRVVCSIDAPQHTDTINYSGAYAALGVDNSVRLDSFCRNF 81

Query: 286  RVEFVPPXXXXXXXXXXXXXXXXXXXXXXXXXXFDMIGIDASLANAFRRILIAEIPTMAI 465
            +VE                              FDMIGID SLANAFRRILIAE+PTMAI
Sbjct: 82   KVEV--------------------KKLTDDDIEFDMIGIDPSLANAFRRILIAEVPTMAI 121

Query: 466  EKVLIANNTSVVQDEVLAHRLGLIPIIVDPRLFEYMSE-NDVPNEKNTIVFNLHVRCEKG 642
            E+V IANNTS++QDEVL+HRLGLIPI  DP LFEY        NEKNTIVF LHVRCEKG
Sbjct: 122  ERVYIANNTSIIQDEVLSHRLGLIPINADPTLFEYPDNAGGENNEKNTIVFKLHVRCEKG 181

Query: 643  GSRITVKSNELKWLPSGSEFLLATENSAPNATEKRKTYTSFSCSQESLPEFSDNPI-TVY 819
              RI VKS+ELKWLP+GS+  L  +++ PNA  K KT+TSFSCSQ+SLPEFS  P+   Y
Sbjct: 182  QPRIIVKSDELKWLPNGSD--LIADDTKPNAGSKPKTFTSFSCSQDSLPEFSKRPLGPTY 239

Query: 820  PDITIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLQDVEGKKAEELV 999
            PDI +A+LGPGQEIELE HAVKG+GKTHAKWSPVATAWYRMLPEVVL++DV+ + A+ELV
Sbjct: 240  PDIILAKLGPGQEIELEVHAVKGVGKTHAKWSPVATAWYRMLPEVVLMEDVKDELADELV 299

Query: 1000 KKCPVGVFDLEDIGNDMQRATVKYPRKCTLCRECVR-GNGWEEVVSLRRVKDHFIFSIES 1176
             KCPV VFD+EDIG   +RATV  PR CTLCREC+R G  WE+ VSLRRVKDHFIF+IES
Sbjct: 300  TKCPVNVFDIEDIGKGRKRATVVKPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTIES 359

Query: 1177 TGALPPEVLFTEAVKNLEDKCERVITELS 1263
            TGA+PP+VLFT+AVK LEDKCERVITELS
Sbjct: 360  TGAIPPDVLFTQAVKILEDKCERVITELS 388


>ref|XP_004148257.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
            [Cucumis sativus] gi|449522768|ref|XP_004168398.1|
            PREDICTED: DNA-directed RNA polymerases I and III subunit
            RPAC1-like [Cucumis sativus]
          Length = 391

 Score =  488 bits (1256), Expect = e-135
 Identities = 257/388 (66%), Positives = 295/388 (76%), Gaps = 2/388 (0%)
 Frame = +1

Query: 106  VWELPDVPSGQLPPHLELQRTRVLCNKIAPTQTEKFQYSGAYAALGVDNSLRLDEFRKNF 285
            +  LPDVP  +LPPH+ELQRTRV C   AP  T+  QYSGA+A++G DNSLRLD FR NF
Sbjct: 29   IMNLPDVPM-KLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNF 87

Query: 286  RVEFVPPXXXXXXXXXXXXXXXXXXXXXXXXXXFDMIGIDASLANAFRRILIAEIPTMAI 465
            ++E +                            FDMIGID +LANAFRRILI+E+PTMAI
Sbjct: 88   KIEVID--------------------LKEDDIEFDMIGIDPALANAFRRILISEVPTMAI 127

Query: 466  EKVLIANNTSVVQDEVLAHRLGLIPIIVDPRLFEYMSENDVPNEKNTIVFNLHVRCEKGG 645
            EKVL ANNTS+VQDEVLAHRLGL+PI VDPRLF+Y S+ D PNE NTIVF LH  CE+G 
Sbjct: 128  EKVLFANNTSIVQDEVLAHRLGLVPIRVDPRLFKY-SDKDAPNENNTIVFRLHACCERGK 186

Query: 646  SRITVKSNELKWLPSGSEFLLATENSAPNATEKRKTYTSFSCSQESLP-EFSDNPITVYP 822
             R+TV S  L WLP+GSEF L ++ S  N+  K KTYTSFSCSQ +L  EFS+NPI    
Sbjct: 187  PRLTVTSKALTWLPNGSEFPLVSDKSVSNS--KPKTYTSFSCSQNTLSKEFSNNPIGPKD 244

Query: 823  -DITIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLQDVEGKKAEELV 999
             DI +ARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVL++++E + AEEL 
Sbjct: 245  SDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLMEEIEDELAEELE 304

Query: 1000 KKCPVGVFDLEDIGNDMQRATVKYPRKCTLCRECVRGNGWEEVVSLRRVKDHFIFSIEST 1179
            KKCPV VFD+EDI    +RATV  PR CTLCREC+RG+ WE+ V+LRRVKDHFIF IEST
Sbjct: 305  KKCPVNVFDIEDIAG-KKRATVARPRDCTLCRECIRGDAWEKRVALRRVKDHFIFKIEST 363

Query: 1180 GALPPEVLFTEAVKNLEDKCERVITELS 1263
            GALPPEVLFTEAVK LEDKCER+I ELS
Sbjct: 364  GALPPEVLFTEAVKILEDKCERLIAELS 391


>ref|XP_004498147.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
            [Cicer arietinum]
          Length = 388

 Score =  488 bits (1255), Expect = e-135
 Identities = 259/389 (66%), Positives = 295/389 (75%), Gaps = 3/389 (0%)
 Frame = +1

Query: 106  VWELPDVPSGQLPPHLELQRTRVLCNKIAPTQTEKFQYSGAYAALGVDNSLRLDEFRKNF 285
            +  L DVPS +L PHLEL +TRV+C+  AP  T+   YSGAYAALGVDNS+RLD F +NF
Sbjct: 23   IMNLEDVPS-KLSPHLELIKTRVVCSIDAPQHTDTINYSGAYAALGVDNSVRLDSFCQNF 81

Query: 286  RVEFVPPXXXXXXXXXXXXXXXXXXXXXXXXXXFDMIGIDASLANAFRRILIAEIPTMAI 465
            +VE                              FDMIGID SLANAFRRILIAE+PTMAI
Sbjct: 82   KVEV--------------------KKLTDDDIEFDMIGIDPSLANAFRRILIAEVPTMAI 121

Query: 466  EKVLIANNTSVVQDEVLAHRLGLIPIIVDPRLFEYMSE-NDVPNEKNTIVFNLHVRCEKG 642
            E+V IANNTS++QDEVL+HRLGLIPI  DP LFEY        NEKNTIVF LHVRCEKG
Sbjct: 122  ERVYIANNTSIIQDEVLSHRLGLIPINADPTLFEYPDNAGGENNEKNTIVFKLHVRCEKG 181

Query: 643  GSRITVKSNELKWLPSGSEFLLATENSAPNATEKRKTYTSFSCSQESLPEFSDNPI-TVY 819
              RITVKS+ELKWLP+GS+  L  +++ PNA  K KT+TSFSCSQ+SLPEFS  P+    
Sbjct: 182  QPRITVKSDELKWLPNGSD--LIADDTKPNAGSKPKTFTSFSCSQDSLPEFSKKPLGPTN 239

Query: 820  PDITIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLQDVEGKKAEELV 999
            PDI +A+LGPGQEIELE HAVKG+GKTHAKWSPVATAWYRMLPEVVL +DV  + A+ELV
Sbjct: 240  PDIILAKLGPGQEIELEVHAVKGVGKTHAKWSPVATAWYRMLPEVVLTEDVTDELADELV 299

Query: 1000 KKCPVGVFDLEDIGNDMQRATVKYPRKCTLCRECVR-GNGWEEVVSLRRVKDHFIFSIES 1176
             KCPV VFD+EDIG   +RATV  PR CTLCREC+R G  WE+ VSLRRVKDHFIF+IES
Sbjct: 300  TKCPVNVFDIEDIGKGRKRATVVKPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTIES 359

Query: 1177 TGALPPEVLFTEAVKNLEDKCERVITELS 1263
            TGA+PPEVLFT+AVK LEDKCERVITELS
Sbjct: 360  TGAIPPEVLFTQAVKILEDKCERVITELS 388


>gb|ESW18590.1| hypothetical protein PHAVU_006G053600g [Phaseolus vulgaris]
          Length = 386

 Score =  478 bits (1230), Expect = e-132
 Identities = 253/389 (65%), Positives = 292/389 (75%), Gaps = 3/389 (0%)
 Frame = +1

Query: 106  VWELPDVPSGQLPPHLELQRTRVLCNKIAPTQTEKFQYSGAYAALGVDNSLRLDEFRKNF 285
            +  L DVPS +LPPHLEL RTRVLCN  AP  T+   YSGAY ALGVDNS + D FR+NF
Sbjct: 21   ILSLDDVPS-KLPPHLELFRTRVLCNNDAPIHTDTIHYSGAYGALGVDNSQQFDRFRENF 79

Query: 286  RVEFVPPXXXXXXXXXXXXXXXXXXXXXXXXXXFDMIGIDASLANAFRRILIAEIPTMAI 465
            +VE                              FDMIGID ++ANAFRRILI+E+PTMAI
Sbjct: 80   KVEV--------------------KRLTDSDMEFDMIGIDPAIANAFRRILISEVPTMAI 119

Query: 466  EKVLIANNTSVVQDEVLAHRLGLIPIIVDPRLFEYM-SENDVPNEKNTIVFNLHVRCEKG 642
            E+V IANNTS+VQDEVL+HRLGLIPI +DPRLFEY  S  D  NEKNTIVF LH RC  G
Sbjct: 120  ERVYIANNTSIVQDEVLSHRLGLIPIRIDPRLFEYPDSAGDDNNEKNTIVFRLHERCRVG 179

Query: 643  GSRITVKSNELKWLPSGSEFLLATENSAPNATEKRKTYTSFSCSQESLPEFSDNPITVYP 822
              RITVKS++LKWLP+GSE  L +E+  PN + K KT+TSF+CSQ SLPEFS N + +  
Sbjct: 180  QPRITVKSDKLKWLPNGSE--LPSEDVKPNTSSKPKTFTSFTCSQNSLPEFSSNSLELTD 237

Query: 823  -DITIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLQDVEGKKAEELV 999
             DI +A+LGPGQEIELEAHAVKG+G+THAKWSPVATAWYRMLPEVVLL+D   ++AE+LV
Sbjct: 238  SDIILAKLGPGQEIELEAHAVKGIGRTHAKWSPVATAWYRMLPEVVLLEDFVDEQAEKLV 297

Query: 1000 KKCPVGVFDLEDIGNDMQRATVKYPRKCTLCRECVR-GNGWEEVVSLRRVKDHFIFSIES 1176
             KC   VFD+EDIG   +RATV  PR CTLCREC+R G  WE+ +S+RRVK HFIF+IES
Sbjct: 298  NKCEPNVFDIEDIGKGKRRATVARPRNCTLCRECIRGGKEWEDRISIRRVKHHFIFTIES 357

Query: 1177 TGALPPEVLFTEAVKNLEDKCERVITELS 1263
            TGALPPEVLFTEAVK LEDKCERVITE S
Sbjct: 358  TGALPPEVLFTEAVKILEDKCERVITEFS 386


>ref|XP_002888129.1| ATRPAC43 [Arabidopsis lyrata subsp. lyrata]
            gi|297333970|gb|EFH64388.1| ATRPAC43 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 385

 Score =  474 bits (1221), Expect = e-131
 Identities = 245/388 (63%), Positives = 292/388 (75%), Gaps = 2/388 (0%)
 Frame = +1

Query: 106  VWELPDVPSGQLPPHLELQRTRVLCNKIAPTQTEKFQYSGAYAALGVDNSLRLDEFRKNF 285
            +++LPDVP+G LPPHLELQRTR +C   AP       YSGAYA++GVDNS+RL+ F ++F
Sbjct: 23   IFDLPDVPTG-LPPHLELQRTRAVCKNDAPIHPTSVLYSGAYASMGVDNSVRLENFSEDF 81

Query: 286  RVEFVPPXXXXXXXXXXXXXXXXXXXXXXXXXXFDMIGIDASLANAFRRILIAEIPTMAI 465
            +V+ +                            FDMIG+ A +ANAFRRIL+AE+P+MAI
Sbjct: 82   KVDVIS--------------------LTETYMVFDMIGVPAGIANAFRRILLAELPSMAI 121

Query: 466  EKVLIANNTSVVQDEVLAHRLGLIPIIVDPRLFEYMSENDVPNEKNTIVFNLHVRCEKGG 645
            EKV +ANNTSV+QDEVLAHRLGLIPI  DPRLFEY+SEND PNEKNTIVF LHV+C KG 
Sbjct: 122  EKVFVANNTSVIQDEVLAHRLGLIPIAADPRLFEYLSENDQPNEKNTIVFKLHVKCPKGD 181

Query: 646  SRITVKSNELKWLPSGSEFLLATENSAPNATEKRKTYTSFSCSQESLPEFSDNPIT-VYP 822
             R  V ++ELKWLP+GSE +      +   T K KTYTSFS SQ+S P F+ NPIT  + 
Sbjct: 182  PRRKVLTSELKWLPNGSELV----KESGGLTTKPKTYTSFSHSQDSFPGFAKNPITPSFQ 237

Query: 823  DITIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLQDVEGKKAEELVK 1002
            DI IA+LGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEV+LL++ EGK AEELVK
Sbjct: 238  DILIAKLGPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEVILLKEFEGKHAEELVK 297

Query: 1003 KCPVGVFDLEDIGNDMQRATVKYPRKCTLCRECVR-GNGWEEVVSLRRVKDHFIFSIEST 1179
             CP  VFD+ED+G   +RATV  PR C+LCREC+R G  W + V LRRVK+HFIF+IEST
Sbjct: 298  VCPKKVFDIEDMGQGRKRATVARPRDCSLCRECIREGVEWAKQVDLRRVKNHFIFTIEST 357

Query: 1180 GALPPEVLFTEAVKNLEDKCERVITELS 1263
            G+ PP+VLF EAVK LEDKCERVI+ELS
Sbjct: 358  GSQPPDVLFNEAVKILEDKCERVISELS 385


>gb|EOY11972.1| RNA polymerase I subunit 43 isoform 4 [Theobroma cacao]
          Length = 323

 Score =  474 bits (1220), Expect = e-131
 Identities = 243/343 (70%), Positives = 272/343 (79%), Gaps = 1/343 (0%)
 Frame = +1

Query: 238  LGVDNSLRLDEFRKNFRVEFVPPXXXXXXXXXXXXXXXXXXXXXXXXXXFDMIGIDASLA 417
            +GVDNSLRLD F  NFRVE V                            FDMIGIDA++A
Sbjct: 1    MGVDNSLRLDHFCHNFRVEVV--------------------RLTEEDMEFDMIGIDAAIA 40

Query: 418  NAFRRILIAEIPTMAIEKVLIANNTSVVQDEVLAHRLGLIPIIVDPRLFEYMSENDVPNE 597
            NAFRRILIAE+PTMAIEKVLIANNTSVVQDEVLAHRLGLIPI VDPRLFEYMSEND PNE
Sbjct: 41   NAFRRILIAELPTMAIEKVLIANNTSVVQDEVLAHRLGLIPISVDPRLFEYMSENDQPNE 100

Query: 598  KNTIVFNLHVRCEKGGSRITVKSNELKWLPSGSEFLLATENSAPNATEKRKTYTSFSCSQ 777
            KNTIVF LHV C++G  RITVKS+ELKWLP+GSE +  +   A ++  K +TYTSFSCSQ
Sbjct: 101  KNTIVFKLHVHCKRGSPRITVKSDELKWLPNGSELIKESRKVASDSASKPETYTSFSCSQ 160

Query: 778  ESLPEFSDNPITV-YPDITIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV 954
            ++LPEF++NPI   YPDI I++LGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV
Sbjct: 161  DTLPEFANNPIAPKYPDIIISKLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV 220

Query: 955  VLLQDVEGKKAEELVKKCPVGVFDLEDIGNDMQRATVKYPRKCTLCRECVRGNGWEEVVS 1134
            VLL++VE   AE L  KCPV VFD+ED+G   +RATV  PR CTLCREC+R   WE+ V+
Sbjct: 221  VLLEEVEDDLAEGLKSKCPVNVFDIEDLGKGKKRATVARPRACTLCRECIRDEEWEKRVA 280

Query: 1135 LRRVKDHFIFSIESTGALPPEVLFTEAVKNLEDKCERVITELS 1263
            + RVKDHFIF+IESTGALPPEVLFTEAVK LEDKCERVITELS
Sbjct: 281  IHRVKDHFIFTIESTGALPPEVLFTEAVKILEDKCERVITELS 323


>ref|NP_176261.1| RNA polymerase I subunit 43 [Arabidopsis thaliana]
            gi|14423464|gb|AAK62414.1|AF386969_1 RNA polymerase
            subunit (isoform B) [Arabidopsis thaliana]
            gi|514324|gb|AAB00529.1| RNA polymerase subunit
            [Arabidopsis thaliana] gi|2462755|gb|AAB71974.1| RNA
            polymerase subunit (isoform B) [Arabidopsis thaliana]
            gi|24899667|gb|AAN65048.1| RNA polymerase subunit
            (isoform B) [Arabidopsis thaliana]
            gi|332195585|gb|AEE33706.1| RNA polymerase I subunit 43
            [Arabidopsis thaliana] gi|1586550|prf||2204246B RNA
            polymerase
          Length = 385

 Score =  473 bits (1216), Expect = e-130
 Identities = 244/388 (62%), Positives = 294/388 (75%), Gaps = 2/388 (0%)
 Frame = +1

Query: 106  VWELPDVPSGQLPPHLELQRTRVLCNKIAPTQTEKFQYSGAYAALGVDNSLRLDEFRKNF 285
            +++LPDVP+G LPPHLELQRTRV+C K +        +SGAY+++GVDNS+RL+ F ++F
Sbjct: 23   IFDLPDVPTG-LPPHLELQRTRVVCKKDSNIHPTAITFSGAYSSMGVDNSVRLENFSEDF 81

Query: 286  RVEFVPPXXXXXXXXXXXXXXXXXXXXXXXXXXFDMIGIDASLANAFRRILIAEIPTMAI 465
            +V+ +                            FDMIG+ A +ANAFRRIL+AE+P+MAI
Sbjct: 82   KVDVIS--------------------LTETDMVFDMIGVHAGIANAFRRILLAELPSMAI 121

Query: 466  EKVLIANNTSVVQDEVLAHRLGLIPIIVDPRLFEYMSENDVPNEKNTIVFNLHVRCEKGG 645
            EKV +ANNTSV+QDEVLAHRLGLIPI  DPRLFEY+SEND PNEKNTIVF LHV+C KG 
Sbjct: 122  EKVYVANNTSVIQDEVLAHRLGLIPIAADPRLFEYLSENDQPNEKNTIVFKLHVKCLKGD 181

Query: 646  SRITVKSNELKWLPSGSEFLLATENSAPNATEKRKTYTSFSCSQESLPEFSDNPI-TVYP 822
             R  V ++ELKWLP+GSE +      +  +T   KTYTSF+ SQ+S PEF++NPI     
Sbjct: 182  PRRKVLTSELKWLPNGSELI----KESGGSTTTPKTYTSFNHSQDSFPEFAENPIRPTLK 237

Query: 823  DITIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLQDVEGKKAEELVK 1002
            DI IA+LGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL++ EGK AEELVK
Sbjct: 238  DILIAKLGPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEVVLLKEFEGKHAEELVK 297

Query: 1003 KCPVGVFDLEDIGNDMQRATVKYPRKCTLCRECVR-GNGWEEVVSLRRVKDHFIFSIEST 1179
             CP  VFD+ED+G   +RATV  PR C+LCREC+R G  WE+ V LRRVK+HFIF+IEST
Sbjct: 298  VCPKKVFDIEDMGQGRKRATVARPRDCSLCRECIRDGVEWEDQVDLRRVKNHFIFTIEST 357

Query: 1180 GALPPEVLFTEAVKNLEDKCERVITELS 1263
            G+ PPEVLF EAVK LEDKCERVI+ELS
Sbjct: 358  GSQPPEVLFNEAVKILEDKCERVISELS 385


>gb|EMJ06508.1| hypothetical protein PRUPE_ppa006811mg [Prunus persica]
          Length = 394

 Score =  472 bits (1214), Expect = e-130
 Identities = 244/385 (63%), Positives = 291/385 (75%), Gaps = 2/385 (0%)
 Frame = +1

Query: 115  LPDVPSGQLPPHLELQRTRVLCNKIAPTQTEKFQYSGAYAALGVDNSLRLDEFRKNFRVE 294
            L DVP G+LP ++E QRTRV C   AP  T+ FQYSGAY+++ V+NS  LD F  NFRVE
Sbjct: 32   LSDVPMGRLPSNIEFQRTRVDCKADAPIHTDTFQYSGAYSSMRVENSF-LDNFCDNFRVE 90

Query: 295  FVPPXXXXXXXXXXXXXXXXXXXXXXXXXXFDMIGIDASLANAFRRILIAEIPTMAIEKV 474
             +                            FDMIGID +LANAFRRILI+E+PTMAIEKV
Sbjct: 91   VI--------------------RLTEDEMEFDMIGIDPALANAFRRILISEVPTMAIEKV 130

Query: 475  LIANNTSVVQDEVLAHRLGLIPIIVDPRLFEYMSENDVPNEKNTIVFNLHVRCEKGGSRI 654
            LIANNTSV+QDEVLAHRLGLIPI  DPRLFEY +EN+  +EKNTIVF LHV CE+ G R+
Sbjct: 131  LIANNTSVIQDEVLAHRLGLIPIKADPRLFEY-AENNTASEKNTIVFKLHVCCERSGQRL 189

Query: 655  TVKSNELKWLPSGSEFLLATENSAPNATEKRKTYTSFSCSQESLPEFSDNPIT-VYPDIT 831
            +VKS EL WLP+GSEF L +++S   ++ K KTYTSF+CSQ+SLPEFS NPI     DI 
Sbjct: 190  SVKSKELIWLPNGSEFPLESQDSKTGSSSKPKTYTSFTCSQDSLPEFSSNPIAPALGDIL 249

Query: 832  IARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLQDVEGKKAEELVKKCP 1011
            IARLGPGQEIELEAHAVKG+GKTH+KWSPV   WY+MLPE+VLL+D+E ++AE+LV  CP
Sbjct: 250  IARLGPGQEIELEAHAVKGIGKTHSKWSPVTPVWYKMLPEIVLLEDIEDQQAEKLVAICP 309

Query: 1012 VGVFDLEDIGNDMQRATVKYPRKCTLCRECVR-GNGWEEVVSLRRVKDHFIFSIESTGAL 1188
            V VFD+EDIG   +RATV  PR CTLCREC+R G GWE  +SL+R KDHFIF+IES+G  
Sbjct: 310  VKVFDIEDIGKGKKRATVARPRACTLCRECIREGKGWENAISLQRKKDHFIFTIESSGVF 369

Query: 1189 PPEVLFTEAVKNLEDKCERVITELS 1263
            PPEVL TEAVK LE+KC+RVI++LS
Sbjct: 370  PPEVLVTEAVKILEEKCDRVISDLS 394